Projects: COVID-19 Disease Map
Institutions: Monash University

Roles: PhD Student
Expertise: Bioinformatics, Machine Learning, Data analysis, Deep Learning, Molecular Biology, Plant biology
Tools: Python, R, SQL, High Performance Computing
Projects: COVID-19 Disease Map
Institutions: Pondicherry University

Roles: PhD Student
Expertise: Bioinformatics, Transcriptomics, Computational Systems Biology, Data analysis
Tools: Data Integration, R, Databases, Python, Cytoscape, network theory
PhD Student at Centre for Bioinformatics, Pondicherry University, Pondicherry, India.
Projects: COVID-19 Disease Map, Covid-19 Interferon pathway modelling and analysis
Institutions: University of Nebraska-Lincoln

Expertise: Computational modelling, Data analysis, Data Integration
Tools: R, Matlab, Cell designer, Cell Collective, Cytoscape
Projects: COVID-19 Disease Map
Institutions: independent researcher

Expertise: Data analysis, Bioinformatics, Molecular Biology, Genetics, Neuroscience
Tools: Data Science, R, Cell designer, SBML, Single Cell analysis, Transcriptomics
Projects: COVID-19 Disease Map
Institutions: Fundación Progreso y Salud

Projects: Not specified
Institutions: Not specified
Expertise: Deep Learning
Tools: R, Python, Shell scripting
Projects: COVID-19 Disease Map
Institutions: European Molecular Biology Laboratory

Expertise: protein-protein interactions, Databases, Pathways, lipidomics, Data analysis, Visualization
Projects: COVID-19 Disease Map
Institutions: MRC-University of Glasgow Centre for Virus Research

Expertise: Modeling, Bioinformatics, Systems Biology
Tools: R
Bioinformatician / Computational Biologist
Projects: CoolWine
Institutions: Norwegian University of Science and Technology
Expertise: Systems Biology
Tools: network theory, FBA, R, Python, Statistics
PhD candidate working on the CoolWine project
Projects: COVID-19 Disease Map
Institutions: University of Cape Town

Projects: COVID-19 Disease Map, Covid-19 Interferon pathway modelling and analysis
Institutions: Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg

Expertise: Machine Learning, Deep Learning, Modeling, Medical microbiology, Molecular Biology
Tools: Python, R, Matlab, Javascript, SBML, Dynamic modelling, microbiology techniques, Shell scripting
Projects: COVID-19 Disease Map
Institutions: European Institute for Systems Biology and Medicine

Expertise: Network Analysis, Modelling
Projects: COVID-19 Disease Map
Institutions: BIOASTER
Projects: COVID-19 Disease Map
Institutions: National Institute for Infectious Diseases "L.Spallanzani"

Expertise: Network Analysis, Modelling
Tools: R, RNAseq, network theory, Genomics
Projects: COVID-19 Disease Map
Institutions: University of Pittsburgh
Expertise: Mathematical modelling, Network Analysis, Dynamics and Control of Biological Networks
Tools: R, Matlab, Python, ODE Modelling
Projects: COVID-19 Disease Map
Institutions: Barcelona Supercomputing Center

I completed my BSc in Biology and MSc in Cell Biology by the University of Valencia. During my last undergrad year I participated in synthetic biology’s iGEM competition where I dove in the use of models in Biology, which pushed me to pursue a PhD in the Department of Applied Mathematics in the Technical University of Valencia.
My research on Metabolic Engineering of hydrogen in cyanobacteria led me to be visiting researcher at Uppsala University, Denmark Technical University and EMBL Heidelberg.
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Expertise: Biochemistry, Cell biology, Data analysis, Dynamic modelling, Systems Biology, Image analysis, Genetics, Molecular Biology, R, SBML, Curation, Quantitative Biology, Physical Chemistry
Tools: Biochemistry and protein analysis, Bioinformatics, Systems Biology, SBML, R, ODE, Molecular biology techniques (RNA/DNA/Protein), Genetics, Dynamic modelling, Computational and theoretical biology, CellDesigner, Parameter estimation
Projects: CEPLAS – Cluster of Excellence on Plant Sciences
Institutions: Heinrich Heine University of Düsseldorf

Roles: Postdoc
Expertise: R, Data Management, Data analysis, Metabolomics, Transcriptomics, Systems Biology, Computational Systems Biology, Bioinformatics
Tools: Data Management, Systems Biology, R, Transcriptomics, Bioinformatics
Tools: Systems Biology, R
Projects: GMDS Project Group "FAIRe Dateninfrastrukturen für die Biomedizinische Informatik"
Institutions: University Medical Center Göttingen

Expertise: Data Management, Databases, Health Informatics, Data Integration
Tools: R, Docker, linux, Data Management
Researcher at the University Medical Center Göttingen, Department of Medical Informatics
Projects: pISA-tree, HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato, INDIE - Biotechnological production of sustainable indole, _p_stRT, ADAPT - Accelerated Development of multiple-stress tolerAnt PoTato
Institutions: National Institute of Biology

Roles: PhD Student
Expertise: Molecular Biology, Statistics, Bioinformatics, Mathematical and statistical modeling, Programming, Data analysisMathematical modellingBioinformaticsSystems biology, Data Management, Data analysis, Visualization, Data Integration, Computational Biology
Tools: Bioinformatics, Computational and theoretical biology, Computational Systems Biology, Data Management, Databases, Dynamic modelling, Molecular Biology, Python, R, Systems Biology, Data Integration
Computational Biologist, Young Researcher at Department of Biotechnology and Systems Biology, National Institute of Biology NIB and PhD candidate in Statistics, Ljubljana, Slovenia
Projects: iRhythmics, GB-XMap: Assessing the risk of gut-brain cross-diseases Investigating the gut-brain-axis
Institutions: University of Rostock

Roles: PhD Student
Expertise: Bioinformatics, Transcriptomics, RNA-Seq, AI, Data Integration
Projects: WG Infrastructure for Translational Research, GMDS Project Group "FAIRe Dateninfrastrukturen für die Biomedizinische Informatik", Translational Bioinformatics, Medical Biometry, Epidemiology, Medical Informatics
Institutions: University Medical Center Göttingen, University of Tübingen, University of Saarland

Expertise: Programming, Bioinformatics, Data Management, Databases, Java, Python, R, standards, Data Integration
Tools: Python, Bioinformatics, Data Management, Databases, R, Java, Data Integration
Ph.D. in Biotechnology
Research associate at Department of Biotechnology and Systems Biology, National Institute of Biology
Projects: PHYTOCAL: Phytochrome Control of Resource Allocation and Growth in Arabidopsis and in Brassicaceae crops, Light and plant development, Light control of leaf development
Institutions: University of Edinburgh

Roles: Postdoc
Expertise: arabidopsis thaliana, caenorhabditis elegans, circadian rhythms, chronobiology, Transcriptomics, splicing, alternative splicing, R, photobiology, plant architecture, leaf development
Tools: Molecular Biology, Molecular biology techniques (RNA/DNA/Protein), R, Systems Biology, Transcriptomics, Bioinformatics, Databases, Genetics, Plant biology, C. elegans biology
Projects: Service to URV Tarragona, Spain with respect to their Safety Assessment of Endocrine Disrupting Chemicals model (Active NOW), EraCoBiotech 2 nd call proposal preparation, SNAPPER: Synergistic Neurotoxicology APP for Environmental Regulation
Institutions: VU University Amsterdam, Universitat Rovira i Virgili

Roles: PhD Student
Expertise: PBPK modeling, Pharmacology, Pharmacokinetics, Mechanistic Modelling
Tools: R, Berkeley Madonna, Copasi, Cell designer
Projects: MycoSynVac - Engineering Mycoplasma pneumoniae as a broad-spectrum animal vaccine, WURSynBio
Institutions: Wageningen University & Research

Roles: PhD Student
Expertise: Bioinformatics, Systems Biology, Agent-based modelling, Dynamic modelling, Python, Java, R, pathogen host interaction, Molecular Biology
Tools: Copasi, libRoadrunner, Python, R, semantic web
I am a researcher (PhD student) working at Wageningen University & Research as bioinformatician and modeller. I am working as part of the MycoSynVac (http://www.mycosynvac.eu/) project on dynamic modelling of central carbon metabolism in M. pneumoniae, to be extended to full dynamic modelling of metabolism to be implemented in a whole cell model.
I am also looking into possibilities to improve standards in model generation using semantic technologies, improving automatic generation, annotation
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Projects: SBEpo - Systems Biology of Erythropoietin
Institutions: German Cancer Research Center (DKFZ)

Roles: PhD Student
Expertise: Mathematical modelling, Single Cell analysis, Cell biology, Molecular Biology
Tools: Biochemistry, Systems Biology, Matlab, R
Expertise: Bioinformatics, Molecular Biology, Next Generation Sequencing, metagenomics, Proteomics, Programming
Tools: bash, Perl, R, Genomics, Proteomics, Biochemistry and protein analysis
Research scientist in multi-Omics, molecular (cell)biology and bioinformatics.
Postdoctoral researcher at Luxembourg Centre For Systems Biomedicine (LCSB), University of Luxembourg
Projects: HUMET Startup, EraCoBiotech 2 nd call proposal preparation, COVID-19 Disease Map
Institutions: geneXplain GmbH

Expertise: Systems Biology, promoters and anhancers, gene regulation, signal transduction, drug targets
Tools: geneXplain platform, BioUML, R, c++
Alexander Kel received his Ph.D. in Bioinformatics, Molecular Biology and Genetics in 1990. He studied biology and mathematics at Novosibirsk State University and obtained his M.S. in biology with special focus on mathematical biology in 1985. He worked for 15 years at the Institute of Cytology and Genetics, Russia (ICG) holding positions as a programmer, scientist, senior scientist and Vice-Head of the Laboratory of Theoretical Molecular Genetics. In 1995, he won the Academician Belaev Award.
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Projects: HUMET Startup, COVID-19 Disease Map
Institutions: Centro de Investigación Príncipe Felipe, Fundación Progreso y Salud

Expertise: Bioinformatics, Data Management, Mathematical modelling, Genomics, Genetics, Transcriptomics, Systems Biology, Microarray analysis, Data Integration
Tools: Bioinformatics, Computational and theoretical biology, Computational Systems Biology, Data Management, Databases, Dynamic modelling, Genetics, Genomics, R, Systems Biology, Transcriptomics, Java
My scientific interests revolve around functional genomics, systems biology and the development of algorithms and software for the analysis of high-throughput data (mainly, but not restricted to, Next Generation Sequencing) and its application to the relationship between genotype and phenotype, mainly oriented to personalized and precision medicine. I am especially interested in the study of disease mechanisms and drug action mechanisms, drug repositioning and the definition of mechanism-based
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Projects: FAIRDOM user meeting
Institutions: SYSBIO - Centre of Systems Biology

Expertise: Bioinformatics, Data Management, Databases, Microarray analysis, Systems Biology
Projects: FAIRDOM user meeting
Institutions: Peter MacCallum Cancer Centre
Roles: PhD Student
Expertise: Systems Biology, Transcriptomics, Genomics
Tools: Systems Biology, Transcriptomics, Computational Systems Biology, Bioinformatics, R
Projects: SulfoSys - Biotec
Institutions: University Bielefeld
Expertise: Bioinformatics, Data Management, Transcriptomics, Proteomics, Metabolomics, Databases, Data Integration
Tools: Bioinformatics, Data Management, Databases, R, Java
Projects: SilicoTryp, SYSTERACT, SynBio4Flav
Institutions: University of Glasgow, Chalmers University of Technology

Projects: ICYSB 2015 - International Practical Course in Systems Biology
Institutions: University of Tokyo
Roles: Postdoc
Expertise: Genetics, Genomics, Cell biology, Image analysis, Phenome, Genetic interaction
Tools: Fluorescence microscopy, CalMorph, R, Java, GLM, Model selection
I am a postdoc in The University of Tokyo. My research interest is to know structure of biological systems by functional relationships between genes working in response to endogenous and/or exogenous disruptions. I'm trying to find functional relationships between genes by similarity of phenotype defined with high-dimensional morphological features in yeast gene deletion collection. I'm happy if you will talk with me in any topics.
Projects: ICYSB 2015 - International Practical Course in Systems Biology
Institutions: Universität Konstanz
Roles: PhD Student
Expertise: Molecular Biology, Systems Biology, Mathematical modelling
Tools: quantitative western blot analysis, Molecular Biology, Java, octave, R, ODE
I studied Life Science (which is similar to chemical biology) at the University of Konstanz and became interested in Bioinformatics, Systems Biology and quantitative analyses during my Master's. In my PhD project I combine experimental analyses with modeling and parameter estimation approaches to quantitatively analyse regulation of apoptosis at the level of the Bcl-2 protein family.
Projects: TRANSLUCENT
Institutions: Humboldt-Universität zu Berlin
Projects: TRANSLUCENT
Institutions: University of Applied Sciences Koblenz, Rhein Ahr Campus
Grammar school until 1998
1998-99 Alternative civilian service
1999-2002 Professional education as male nurse
2002-2007 Study of Biomathematics
2007-... PhD student in TRANSLUCENT project
Institutions: University of Tuebingen, University of Tübingen
Projects: SUMO
Institutions: University of Stuttgart
I'm interested in the application and development of methods of systems theory in biology (systems biology). In particulary I work on the following topics:
Thermodynamic constraints on biochemical network; Model reduction; Modeling and Analysis of metabolic regulation.
Projects: MOSES
Institutions: Medical University Vienna
Expertise: Bioinformatics
Tools: Data Management, Computational and theoretical biology, Transcriptomics, Perl, Microarray analysis, R, PHP, SQL
General Bioinformatics
Projects: STREAM
Institutions: University of Warwick
Systems Biologist specialising in data integration, high-throughput sequence analysis, and evolutionary and comparative analyses.
Projects: TRANSLUCENT
Institutions: University of Applied Sciences Koblenz, Rhein Ahr Campus
Expertise: Ma
Tools: Computational and theoretical biology, Matlab, R, Biophysics, Thermodynamics, Machine Learning
I am working in the mathematical modeling of potassium homeostasis. In addition, we are developing tools and methods for the statistical analysis of biological data.