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- Jay Moore
Systems Biologist specialising in data integration, high-throughput sequence analysis, and evolutionary and comparative analyses.
SEEK ID: https://fairdomhub.org/people/175
Location:
United Kingdom
Expertise: Bioinformatics, Software Engineering, Systems Biology, Comparative Genomics, Database and data warehouse design, High-throughput sequence analysis, Phylogenetics, Data Integration
Tools: SBML, Databases, Perl, R, EnsEMBL, BioMart, HTML, XML
ORCID: Not specified
Related items
- Projects (1)
- Institutions (1)
- Investigations (1)
- Studies (2)
- Assays (5)
- Strains (2)
- Data files (4+4)
- Models (1+1)
- SOPs (15+1)
- Publications (9)
Global metabolic switching in Streptomyces coelicolor
Antibiotics are made during the second phase of growth when there is a transition in metabolism from primary to secondary metabolism. Primary metabolism is growth related and involves all the normal cellular activities associated with cell growth and division. Whereas secondary metabolism is non-growth linked and is non-essential but many important activities occur during this phase which help the bacterium survive.
Programme: SysMO
Public web page: Not specified
Organisms: Streptomyces coelicolor
All contributors
Antibiotics are made during the second phase of growth when there is a transition in metabolism from primary to secondary metabolism. Primary metabolism is growth related and involves all the normal cellular activities associated with cell growth and division. Whereas secondary metabolism is non-growth linked and is non-essential but many important activities occur during this phase which help the bacterium survive.
One of these activities is antibiotic production and is widespread in streptomycetes
...
Snapshots: No snapshots
Person responsible: Jay Moore
Snapshots: No snapshots
Investigation: Metabolism of Streptomyces coelicolor (SysMO ST...
Assays: Metabolic pathway curation
All contributors
Genotype: Wildtype (M145E)
Medium: Phosphate-limited (F134)
Person responsible: Jay Moore
Snapshots: No snapshots
Investigation: Metabolism of Streptomyces coelicolor (SysMO ST...
Assays: Online/offline measurements, metabolomics, proteomics, transcriptomics
Submitter: Jay Moore
Assay type: Metabolite Profiling
Technology type: Gas Chromatography Mass Spectrometry
Snapshots: No snapshots
Investigation: Metabolism of Streptomyces coelicolor (SysMO ST...
Study: Timeseries 1
Organisms: Streptomyces coelicolor : M145 (wild-type / wild-type) (batch)
SOPs: MCF derivatization, Metabolome extraction, Spore batch generation
Data files: 1 hidden item
Submitter: Jay Moore
Assay type: Proteomics
Technology type: Gas Chromatography Mass Spectrometry
Snapshots: No snapshots
Investigation: Metabolism of Streptomyces coelicolor (SysMO ST...
Study: Timeseries 1
Organisms: Streptomyces coelicolor : M145 (wild-type / wild-type) (batch)
SOPs: No SOPs
Data files: 2 hidden items
Submitter: Jay Moore
Assay type: Experimental Assay Type
Technology type: Technology Type
Snapshots: No snapshots
Investigation: Metabolism of Streptomyces coelicolor (SysMO ST...
Study: Timeseries 1
Organisms: Streptomyces coelicolor : M145 (wild-type / wild-type) (batch)
SOPs: Cell dry weight (CDW) determination of Streptom..., Contamination test of Streptomyces coelicolor c..., Generation of cell material from Streptomyces c..., Generation of cell material from Streptomyces c..., Generation of cell material from Streptomyces c..., Preparation of inoculum for Streptomyces coelic..., Sampling from Streptomyces coelicolor culture f... and 1 hidden item
Data files: Fermentor 199 cultivation data
Submitter: Jay Moore
Assay type: Transcriptomics
Technology type: Custom Array
Snapshots: No snapshots
Investigation: Metabolism of Streptomyces coelicolor (SysMO ST...
Study: Timeseries 1
Organisms: Streptomyces coelicolor : M145 (wild-type / wild-type) (batch)
SOPs: No SOPs
Data files: Fermentor 199 transcriptomics
Investigation: Metabolism of Streptomyces coelicolor (SysMO ST...
Study: ScoCyc metabolic pathway curation
Organisms: Streptomyces coelicolor : M145 (wild-type / wild-type)
Models: 1 hidden item
SOPs: No SOPs
Data files: No Data files
Submitter: Jay Moore
Provider Name: Not specified
Provider's strain ID: Not specified
Organism: Streptomyces coelicolor
Genotypes: wild-type
Phenotypes: wild-type
Comment: Not specified
Submitter: Jay Moore
Provider Name: Not specified
Provider's strain ID: Not specified
Organism: Streptomyces coelicolor
Genotypes: wild-type
Phenotypes: wild-type
Comment: Not specified
Creators: Trond Ellingsen, Øyvind Jakobsen, Per Bruheim, Håvard Sletta, Anders Øverby, Sven Even Borgos, Sunniva Hoel, Alexander Wentzel
Submitter: Jay Moore
Investigations: Metabolism of Streptomyces coelicolor (SysMO ST...
Studies: Timeseries 1
Assays: Online/offline measurements
All contributors
Creators: Jay Moore, Juan-Francisco Martin, Antonio Rodríguez-García, Trond Ellingsen, Øyvind Jakobsen, Per Bruheim, Håvard Sletta, Anders Øverby, Sven Even Borgos, Sunniva Hoel, Alexander Wentzel, Maggie Smith, Louise Thomas, Eriko Takano, Lubbert Dijkhuizen, Rainer Breitling, M. Tauqeer Alam, Anthony Palathingal, R Jansen, Maria Elena Merlo, Morris Swertz, Preben Krabben, Kay Nieselt, Wolfgang Wohlleben, Jens Reuther, David Hodgson, David Rand, David Wild, Elizabeth Wellington, Gregory Challis, Nigel Burroughs, Walid Omara, William Gaze, Brent Kiernan, Roxane Legaie
Submitter: Jay Moore
Investigations: Metabolism of Streptomyces coelicolor (SysMO ST...
Studies: Timeseries 1
Assays: transcriptomics
Creators: Jay Moore, David Hodgson
Submitter: Jay Moore
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creators: Jay Moore, David Hodgson
Submitter: Jay Moore
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creators: Jay Moore, David Hodgson, Veronica Armendarez, Emma Laing , Govind Chandra, Mervyn Bibb
Submitter: Jay Moore
Model type: Metabolic network
Model format: BioPAX
Environment: Not specified
Organism: Streptomyces coelicolor
Investigations: No Investigations
Studies: No Studies
Modelling analyses: No Modelling analyses
Creators: Trond Ellingsen, Øyvind Jakobsen, Per Bruheim, Håvard Sletta, Anders Øverby, Sven Even Borgos, Sunniva Hoel, Alexander Wentzel
Submitter: Jay Moore
Investigations: Metabolism of Streptomyces coelicolor (SysMO ST... and 1 hidden item
Studies: Timeseries 1 and 2 hidden items
Assays: metabolomics and 2 hidden items
Creators: Trond Ellingsen, Øyvind Jakobsen, Per Bruheim, Håvard Sletta, Anders Øverby, Sven Even Borgos, Sunniva Hoel, Alexander Wentzel
Submitter: Jay Moore
Investigations: Metabolism of Streptomyces coelicolor (SysMO ST...
Studies: Timeseries 1
Assays: metabolomics
Creators: Trond Ellingsen, Øyvind Jakobsen, Per Bruheim, Håvard Sletta, Anders Øverby, Sven Even Borgos, Sunniva Hoel, Alexander Wentzel
Submitter: Jay Moore
Investigations: Metabolism of Streptomyces coelicolor (SysMO ST...
Studies: Timeseries 1
Assays: metabolomics
Creators: Louise Thomas, Maggie Smith
Submitter: Jay Moore
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creators: Louise Thomas, Maggie Smith
Submitter: Jay Moore
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creators: Louise Thomas, Maggie Smith
Submitter: Jay Moore
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creators: Louise Thomas, Maggie Smith
Submitter: Jay Moore
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creators: Louise Thomas, Maggie Smith
Submitter: Jay Moore
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creators: Per Bruheim, Trond Ellingsen, Sunniva Hoel, Øyvind Jakobsen, Håvard Sletta, Alexander Wentzel, Anders Øverby, Strøm, A
Submitter: Jay Moore
Investigations: Metabolism of Streptomyces coelicolor (SysMO ST... and 1 hidden item
Studies: Timeseries 1 and 8 hidden items
Assays: Online/offline measurements and 8 hidden items
Creators: Per Bruheim, Trond Ellingsen, Sunniva Hoel, Øyvind Jakobsen, Håvard Sletta, Alexander Wentzel, Anders Øverby, Strøm, A
Submitter: Jay Moore
Investigations: Metabolism of Streptomyces coelicolor (SysMO ST... and 1 hidden item
Studies: Timeseries 1 and 8 hidden items
Assays: Online/offline measurements and 8 hidden items
Creators: Per Bruheim, Trond Ellingsen, Sunniva Hoel, Øyvind Jakobsen, Håvard Sletta, Alexander Wentzel, Anders Øverby, Strøm, A
Submitter: Jay Moore
Investigations: Metabolism of Streptomyces coelicolor (SysMO ST... and 1 hidden item
Studies: Timeseries 1 and 8 hidden items
Assays: Online/offline measurements and 8 hidden items
Creators: Per Bruheim, Trond Ellingsen, Sunniva Hoel, Øyvind Jakobsen, Håvard Sletta, Alexander Wentzel, Anders Øverby, Strøm, A
Submitter: Jay Moore
Investigations: Metabolism of Streptomyces coelicolor (SysMO ST... and 1 hidden item
Studies: Timeseries 1 and 8 hidden items
Assays: Online/offline measurements and 8 hidden items
Creators: Per Bruheim, Trond Ellingsen, Sunniva Hoel, Øyvind Jakobsen, Håvard Sletta, Alexander Wentzel, Anders Øverby, Strøm, A
Submitter: Jay Moore
Investigations: Metabolism of Streptomyces coelicolor (SysMO ST... and 1 hidden item
Studies: Timeseries 1 and 8 hidden items
Assays: Online/offline measurements and 8 hidden items
Creators: Per Bruheim, Trond Ellingsen, Sunniva Hoel, Øyvind Jakobsen, Håvard Sletta, Alexander Wentzel, Anders Øverby, Strøm, A
Submitter: Jay Moore
Investigations: Metabolism of Streptomyces coelicolor (SysMO ST... and 1 hidden item
Studies: Timeseries 1 and 8 hidden items
Assays: Online/offline measurements and 8 hidden items
Creators: Per Bruheim, Trond Ellingsen, Sunniva Hoel, Øyvind Jakobsen, Håvard Sletta, Alexander Wentzel, Anders Øverby, Strøm, A
Submitter: Jay Moore
Investigations: Metabolism of Streptomyces coelicolor (SysMO ST... and 1 hidden item
Studies: Timeseries 1 and 8 hidden items
Assays: Online/offline measurements and 8 hidden items
Abstract (Expand)
Authors: , , The STREAM Consortium (stream), , , ,
Date Published: 2010
Publication Type: Not specified
Citation:
All contributors
Abstract (Expand)
Authors: , Florian Battke, Alexander Herbig, , , , , , , , , Edward R Morrissey, Miguel A Juarez-Hermosillo, , Merle Nentwich, , Mudassar Iqbal, , , , , , , , Michael Bonin, , , , , , , , , ,
Date Published: 28th May 2009
Publication Type: Not specified
PubMed ID: 20053288
Citation:
Abstract (Expand)
Authors: Nai-Hua Hsiao, Marco Gottelt,
Date Published: 21st Apr 2009
Publication Type: Not specified
PubMed ID: 19374982
Citation:
Abstract (Expand)
Authors: Simon Rogers, Richard A Scheltema, Mark Girolami,
Date Published: 18th Dec 2008
Publication Type: Not specified
PubMed ID: 19095699
Citation:
Abstract (Expand)
Authors: Mansoor Saqi, Richard J B Dobson, Preben Kraben, ,
Date Published: 13th Nov 2008
Publication Type: Not specified
PubMed ID: 20134075
Citation:
Abstract (Expand)
Authors: Richard A Scheltema, Anas Kamleh, David Wildridge, Charles Ebikeme, David G Watson, Michael P Barrett, ,
Date Published: 22nd Oct 2008
Publication Type: Not specified
PubMed ID: 18937253
Citation:
Abstract (Expand)
Authors: Sarika Mehra, Salim Charaniya, , Wei-Shou Hu
Date Published: 2nd May 2008
Publication Type: Not specified
PubMed ID: 18628968
Citation:
Abstract (Expand)
Authors: , Dennis Vitkup, Michael P Barrett
Date Published: 21st Nov 2007
Publication Type: Not specified
PubMed ID: 18026122
Citation:
Abstract (Expand)
Authors: Fabien Jourdan, , Michael P Barrett, David Gilbert
Date Published: 14th Nov 2007
Publication Type: Not specified
PubMed ID: 18003642
Citation: