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Concentrations of PFAS in liver and PAH metabolites in bile of cod exposed to mixtures of PAHs and PFASs

Creator: Karina Dale

Submitter: Karina Dale

Tail intensities (%) measured by the Comet Assay as indication of DNA fragmentation in blood cells of Atlantic cod exposed to PAHs and PFASs

Creator: Karina Dale

Submitter: Karina Dale

Measured in cod liver by the ELISA method, in Atlantic cod exposed to PAHs and PFASs

Creator: Karina Dale

Submitter: Karina Dale

Mean normalized expression (MNE) levels of cyp1a and acox1 measured in liver of Atlantic Cod exposed to PAH and PFAS mixtures

Creator: Karina Dale

Submitter: Karina Dale

Concentrations of the egg yolk precursor protein vitellogenin (Vtg) in cod plasma - 10 samples from each exposure group, IV1 experiment

Creator: Karina Dale

Submitter: Karina Dale

Measured in liver of Atlantic cod exposed to PAHs and PFASs

Creator: Karina Dale

Submitter: Karina Dale

Biometrics of IV1 fish exposed to PAH and PFAS

A collection of python scripts used to generate CML from csv (CSV_to_CML.py), apply machine learning (Gradient Boosting using decision trees, prediction_viscosity.py), model based on eq 6 in the associated publication, and to plot the generated data (plot*.py).

Contains CML dictionaries created to store deep eutectic solvent data with CML.

Contains CML created for experimental, simulation and predicted data. Predictions were made based on experimental data using a gradient boosting decision tree.

Contains exp.csv, a collection of experimental data of CholineChloride:Glycerol:Water mixtures.
Contains sim.csv, a collection of molecular dynamics simulation data of CholineChloride:Glycerol:Water mixtures.
Contains Modelling_exp_Figure3.csv, a collection of modelled Eeta (energy activation of viscous flow), lnEta0 (viscosity at infinite temperature) values of CholineChloride:Glycerol:Water mixtures, based on experimental data, see the associated publication for details.
Contains
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CML dictionary for compchem conventions allowing representation of thermophysical properties of deep eutectic solvents (DES) with CML. Examples of thermophysical properties are: density, viscosity, conductivity and water activity

CML unit dictionary for mili pascal * second and microSiemens per cm

coverage and uniquely mapped spliced reads summary

Creator: Maja Zagorscak

Submitter: Maja Zagorscak

This pdf file contains all figures of the article "Integrative Cluster Analysis of Whole Hearts Reveals Proliferative Cardiomyocytes in Adult Mice" in high resolution.

This pdf contains the top 10 markers for each identified cell type as a dot-plot.

The file contains an UMAP representation illustrating the expression of the stem cell marker Cd34 in all identified cell clusters.

The file contains FeaturePlots of 4 different cardiomyocyte markers (Actn2, Tnnc1, Actc1 and Ryr2) to demonstrate how annotation of clusters needs to be based on several markers and approaches, which in the aggregate allow for more reliable conclusions/results.

The file contains the absolute and relative cell/nuclei numbers per cluster for each individual dataset used in the integrated analysis.
Subpopulations were grouped together for the representation of relative cell/nuclei numbers.

Data for global pH monitoring experiments for precipitation in publication: Microbial-induced calcium carbonate precipitation: An experimental toolbox for in situ and real-time investigation of micro-scale pH evolution.
Included data: calibration data and data for pH evolution of precipitation process (including spectrum before measurement, timeevolution of absorption intensity and spectrum after measurement).

Optical microscopy data for precipitation process

Creator: Jennifer Zehner

Submitter: Jennifer Zehner

Data for local pH monitoring experiments for dissolution in publication: Microbial-induced calcium carbonate precipitation: An experimental toolbox for in situ and real-time investigation of micro-scale pH evolution

Data for Raman microspectroscopy in publication: Microbial-induced calcium carbonate precipitation: An experimental toolbox for in situ and real-time investigation of micro-scale pH evolution

Creator: Jennifer Zehner

Submitter: Jennifer Zehner

Data for local pH monitoring precipitation experiments in publication: Microbial-induced calcium carbonate precipitation: An experimental toolbox for in situ and real-time investigation of micro-scale pH evolution

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_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

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