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output/PCA_PC1_top10genes.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_04_limma_min10counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_04_limma_min10counts-R

Download

Created: 16th May 2022 at 11:26, Last updated: 6th Nov 2024 at 15:26

output/PCA_PC2_top10genes.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_04_limma_min10counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_04_limma_min10counts-R

Download

Created: 16th May 2022 at 11:26, Last updated: 6th Nov 2024 at 15:26

scripts/limmavoom_min10.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_04_limma_min10counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_04_limma_min10counts-R

Download

Created: 16th May 2022 at 11:26, Last updated: 6th Nov 2024 at 15:26

scripts/STAR_mapToGenomeAll_commands.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome_extSamples/_A_01_mapToGenomeAll-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome_extSamples

Assays: _A_01_mapToGenomeAll-STAR

Download

Created: 16th May 2022 at 11:28, Last updated: 6th Nov 2024 at 15:26

_Assay_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_04_limma_min10counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_04_limma_min10counts-R

Download

Created: 16th May 2022 at 10:33, Last updated: 6th Nov 2024 at 15:26

output/PCA_PC2_top10genes.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_03_limma_min50counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_03_limma_min50counts-R

Download

Created: 16th May 2022 at 11:26, Last updated: 6th Nov 2024 at 15:26

output/Pcitri_RNAseq_lcpms.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_03_limma_min50counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_03_limma_min50counts-R

Download

Created: 16th May 2022 at 11:26, Last updated: 6th Nov 2024 at 15:26

input/Expression Browser.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_04_limma_min10counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_04_limma_min10counts-R

Download

Created: 16th May 2022 at 11:26, Last updated: 6th Nov 2024 at 15:26

output/min10counts.xlsx

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_04_limma_min10counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_04_limma_min10counts-R

Download

Created: 16th May 2022 at 11:26, Last updated: 6th Nov 2024 at 15:26

output/P_citri_RNAseq_logFC_padj_min10_counts.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_04_limma_min10counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_04_limma_min10counts-R

Download

Created: 16th May 2022 at 11:26, Last updated: 6th Nov 2024 at 15:26

_ASSAY_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_03_limma_min50counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_03_limma_min50counts-R

Download

Created: 16th May 2022 at 10:33, Last updated: 6th Nov 2024 at 15:26

output/P_citri_RNAseq_logFC_padj_counts.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_03_limma_min50counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_03_limma_min50counts-R

Download

Created: 16th May 2022 at 11:25, Last updated: 6th Nov 2024 at 15:26

output/P_citri_RNAseq_logFC_padj_counts_min50.xlsx

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_03_limma_min50counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_03_limma_min50counts-R

Download

Created: 16th May 2022 at 11:26, Last updated: 6th Nov 2024 at 15:26

output/P_citri_RNAseq_logFC_padj_counts_min50_countsOnly.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_03_limma_min50counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_03_limma_min50counts-R

Download

Created: 16th May 2022 at 11:26, Last updated: 6th Nov 2024 at 15:26

output/PCA_PC1_top10genes.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_03_limma_min50counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_03_limma_min50counts-R

Download

Created: 16th May 2022 at 11:26, Last updated: 6th Nov 2024 at 15:26

output/PCA_PC2_top10genes.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 11:25, Last updated: 6th Nov 2024 at 15:26

_ASSAY_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 10:33, Last updated: 6th Nov 2024 at 15:26

input/Expression Browser.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

output/P_citri_RNAseq_logFC_padj_counts.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 11:25, Last updated: 6th Nov 2024 at 15:26

output/P_citri_RNAseq_logFC_padj_counts.xlsx

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 11:25, Last updated: 6th Nov 2024 at 15:26

output/PCA_PC1_top10genes.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 11:25, Last updated: 6th Nov 2024 at 15:26

_STUDY_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _S_P4_Pcitri_genome-files

Download

Created: 16th May 2022 at 10:27, Last updated: 6th Nov 2024 at 15:26

_ASSAY_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_cand_genomic/_A_TPS_phy-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_cand_genomic

Assays: _A_TPS_phy-bioinfo

Download

Created: 16th May 2022 at 10:32, Last updated: 6th Nov 2024 at 15:26

_ASSAY_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:32, Last updated: 6th Nov 2024 at 15:26

output/bam_link.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:48, Last updated: 6th Nov 2024 at 15:26

output/Expression Browser.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:48, Last updated: 6th Nov 2024 at 15:26

output/trimmed_reads_link.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:48, Last updated: 6th Nov 2024 at 15:26

_ASSAY_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_cand_genomic/_A_Terzyme-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_cand_genomic

Assays: _A_Terzyme-bioinfo

Download

Created: 16th May 2022 at 10:32, Last updated: 6th Nov 2024 at 15:26

input/BLAST_MTS_query_sequences.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_cand_genomic/_A_MEME-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_cand_genomic

Assays: _A_MEME-bioinfo

Download

Created: 16th May 2022 at 10:46, Last updated: 6th Nov 2024 at 15:26

output/prenyl_aln.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_cand_genomic/_A_Terzyme-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_cand_genomic

Assays: _A_Terzyme-bioinfo

Download

Created: 16th May 2022 at 10:47, Last updated: 6th Nov 2024 at 15:26

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