SOPs158 SOPs visible to you, out of a total of 286
Metabolomics perturbation sample preparation and description of how the exact details of the perturbations.
-Amino acid starvation
-Oxidative stress via H2O2
-Glycerol addition to the medium
We have adapted the definitions of terms in [ISA best practice] and [programmes and projects]:
Programme = Overarching research theme (The Digital Salmon)
Project = Research grant (DigiSal, GenoSysFat)
Investigation = a particular biological process, phenomenon or thing
(typically corresponds to [plans for] one or more closely related papers)
Study = experiment whose design reflects a specific biological research question
Assay = standardized measurement or diagnostic experiment using a
Protocol for the extraction of biomolecules (DNA,RNA,protein,metabolties) from the same sample. Originally intended for lipid accumulating organisms (LAO) from wastewater treatment plant samples.
So far succesfully used for pelleted cells from planktonic cultures.
Metabolic networks with gene expression are researched under very different banners with different techniques. For example, there are the dynamic enzyme-cost Flux Balance Analysis (deFBA) , conditional Flux Balance Analysis , Metabolism and Expression models (ME models) , Resource Balance Analysis , etc. At their core, these methods can all understood as Resource Allocation Models (RAM) and while investigating their potential and their results, we encountered the problem of sharing