SOPs

What is a SOP?

317 SOPs visible to you, out of a total of 572

P.GRI-230228-V1_2.4-Linear-Mixed-Model-for-Proteomics-Data

Endometriosis

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Endometriosis

Studies: Integrating endometrial proteomic and single ce...

Assays: Linear Mixed Model - Data Linked

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Created: 7th Nov 2023 at 21:39, Last updated: 17th Nov 2023 at 22:43

Views: 59, Downloads: 0

P.GRI-231101-V1_scRNA_Protocol

Endometriosis

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Endometriosis

Studies: Integrating endometrial proteomic and single ce...

Assays: DNA Extraction - Metadata, Single Cell Sequencing - Data Linked

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Created: 3rd Nov 2023 at 19:52, Last updated: 17th Nov 2023 at 22:43

Views: 41, Downloads: 0

P.GRI-230228-V1_2.3-Tissue-Preparation-for-Proteomics-and-Running-the-LC-MSMS

Endometriosis

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Endometriosis

Studies: Integrating endometrial proteomic and single ce...

Assays: Mass Spectrometry Proteomics - Data Linked, Mass Spectrometry Proteomics Analysis - Data Li...

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Created: 7th Nov 2023 at 17:40, Last updated: 17th Nov 2023 at 22:43

Views: 46, Downloads: 0

P.GRI-230228-V1_2.7-Tissue-Sectioning,-Staining,-and-Quantification

Endometriosis

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Endometriosis

Studies: Integrating endometrial proteomic and single ce...

Assays: Immunohistochemistry - Data Linked

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Created: 7th Nov 2023 at 19:03, Last updated: 17th Nov 2023 at 22:43

Views: 53, Downloads: 0

P.GRI-231107-V1_Computational-analyses-of-scRNA-seq-data.docx

Endometriosis

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Endometriosis

Studies: Integrating endometrial proteomic and single ce...

Assays: Single Cell Expression Matrix Analysis - Data L...

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Created: 7th Nov 2023 at 21:14, Last updated: 17th Nov 2023 at 22:43

Views: 50, Downloads: 0

P.GRI-231103-V1_ELISA_Luminex_Protocol

Endometriosis

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Endometriosis

Studies: Organoid co-culture model of the cycling human ...

Assays: Elisa - Data Linked

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Created: 3rd Nov 2023 at 21:30, Last updated: 17th Nov 2023 at 22:20

Views: 36, Downloads: 0

P.GRI-231107-V1_Bulk-RNAseq-analysis-of-in-vitro-co-cultures.docx

Endometriosis

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Endometriosis

Studies: Organoid co-culture model of the cycling human ...

Assays: Gene Expression Analysis - Data Linked

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Created: 7th Nov 2023 at 21:10, Last updated: 17th Nov 2023 at 22:20

Views: 48, Downloads: 1

P.GRI-230228-V1_2.1-Study-Approval.docx

Endometriosis

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Endometriosis

Studies: Integrating endometrial proteomic and single ce..., Organoid co-culture model of the cycling human ...

Assays: Patient Visit - Metadata, Patient Visit - Metadata, Tissue Collection - Metadata, Tissue Collection - Metadata

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Created: 3rd Nov 2023 at 15:14, Last updated: 17th Nov 2023 at 22:20

Views: 39, Downloads: 0

P.GRI-231030-V1_Tissue_Protocol

Endometriosis

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Endometriosis

Studies: Integrating endometrial proteomic and single ce..., Organoid co-culture model of the cycling human ...

Assays: Tissue Collection - Metadata, Tissue Collection - Metadata

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Created: 3rd Nov 2023 at 15:52, Last updated: 17th Nov 2023 at 22:20

Views: 45, Downloads: 1

P.GRI-231030-V1_Cell_Culture_and_Organoid_Generation_Protocol.docx

Endometriosis

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Endometriosis

Studies: Organoid co-culture model of the cycling human ...

Assays: Cell Culture and Organoid Generation - Metadata

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Created: 3rd Nov 2023 at 16:22, Last updated: 17th Nov 2023 at 22:20

Views: 49, Downloads: 0

P.GRI-231101-V1_RNA-isolation-and-bulk-RNA-seq

Endometriosis

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Endometriosis

Studies: Organoid co-culture model of the cycling human ...

Assays: DNA Extraction - Metadata, Short Read Sequencing - Data Linked

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Created: 3rd Nov 2023 at 20:14, Last updated: 17th Nov 2023 at 22:20

Views: 57, Downloads: 0

P.GRI-231030-V4_Imaging_Protocol

Endometriosis

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Endometriosis

Studies: Organoid co-culture model of the cycling human ...

Assays: Cell Culture Imaging - Data Linked

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Created: 7th Nov 2023 at 19:21

Views: 96, Downloads: 1

P.ENG-230913-V1_In-Vivo-Comet-Chip---MUS.docx

MIT SRP

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MIT SRP

Studies: Novel In Vivo CometChip Reveals NDMA-Induced DN...

Assays: Chemical Challenge - Metadata, Tissue Collection - Metadata

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Created: 13th Sep 2023 at 18:43, Last updated: 3rd Nov 2023 at 15:00

Views: 80, Downloads: 1

P.ENG-230912-V1_MMS-and-NDMA-TIS.docx

MIT SRP

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MIT SRP

Studies: Novel In Vivo CometChip Reveals NDMA-Induced DN...

Assays: Tissue Collection - Metadata

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Created: 13th Sep 2023 at 19:22, Last updated: 3rd Nov 2023 at 15:00

Views: 73, Downloads: 1

P.ENG-230912-V1_Cell-Culture.docx

MIT SRP

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MIT SRP

Studies: Novel In Vivo CometChip Reveals NDMA-Induced DN...

Assays: Comet Chip - Data Linked

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Created: 13th Sep 2023 at 19:25, Last updated: 3rd Nov 2023 at 15:00

Views: 73, Downloads: 1

P.ENG-230912-V1_In-Vivo-Comet-Assay-Protocol.docx

MIT SRP

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MIT SRP

Studies: Novel In Vivo CometChip Reveals NDMA-Induced DN...

Assays: Comet Chip - Data Linked, Comet Chip Analysis - Data Attached

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Created: 13th Sep 2023 at 19:26, Last updated: 3rd Nov 2023 at 15:00

Views: 78, Downloads: 1

P.WHI-210301-V1_Tissue_Lysis_Protocol

MIT SRP

No description specified

Creator: Dikshant Pradhan

Submitter: Dikshant Pradhan

Investigations: No Investigations

Studies: No Studies

Assays: No Assays

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Created: 30th Mar 2021 at 18:37, Last updated: 3rd Nov 2023 at 15:00

Views: 617, Downloads: 1

P.WHI-200519-V1_Mass_spectrometry_data_processing_protocol

MIT SRP

No description specified

Creator: Dikshant Pradhan

Submitter: Dikshant Pradhan

Investigations: No Investigations

Studies: No Studies

Assays: No Assays

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Created: 30th Mar 2021 at 18:41, Last updated: 3rd Nov 2023 at 15:00

Views: 571, Downloads: 1

P.WHI-200519-V1_Bottom_up_proteomics_protocol

MIT SRP

No description specified

Creator: Dikshant Pradhan

Submitter: Dikshant Pradhan

Investigations: No Investigations

Studies: No Studies

Assays: No Assays

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Created: 30th Mar 2021 at 19:05, Last updated: 3rd Nov 2023 at 15:00

Views: 567, Downloads: 1

P.ENG-230913-V1_Chemicals-and-Reagents.docx

MIT SRP

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MIT SRP

Studies: Novel In Vivo CometChip Reveals NDMA-Induced DN...

Assays: Chemical Challenge - Metadata

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Created: 13th Sep 2023 at 18:31, Last updated: 3rd Nov 2023 at 15:00

Views: 77, Downloads: 1

P.FOR-230503-V1_Barcoding-Whole-Genome-Sequencing-Protocol.docx

IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: Short Read Sequencing - Data Linked

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Created: 20th Oct 2023 at 17:51, Last updated: 20th Oct 2023 at 21:43

Views: 173, Downloads: 0

P.FOR-231020-V1_DBMM-Analysis-CD8.docx

IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: Digitally Barcoded Mtb Matrix Analysis - Data A...

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Created: 20th Oct 2023 at 17:53, Last updated: 20th Oct 2023 at 21:43

Views: 174, Downloads: 1

SOP proteomics P. cordatum heat stress response

Heat stress response of the red-tide dinoflagellate Prorocentrum cordatum

Detailed description of the methods applied for proteomic analyses of P. cordatum heat stress response

Creator: Lars Wöhlbrand

Submitter: Lars Wöhlbrand

Investigations: No Investigations

Studies: No Studies

Assays: No Assays

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Created: 18th Jul 2022 at 09:51, Last updated: 16th Oct 2023 at 15:03

Views: 143, Downloads: 3

SOP metabolomic methods Prorocentrum cordatum heat stress response

Heat stress response of the red-tide dinoflagellate Prorocentrum cordatum

Detailed description of the methods applied for metabolomic analyses of P. cordatum heat stress response

Creator: Carsten Reuse

Submitter: Carsten Reuse

Investigations: No Investigations

Studies: No Studies

Assays: No Assays

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Created: 21st Jul 2022 at 18:18, Last updated: 16th Oct 2023 at 15:03

Views: 128, Downloads: 2

P.FLY-231011_Patient Visit CD8

IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: Patient Visit - Metadata, Tissue Collection - Metadata

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Created: 11th Oct 2023 at 20:33, Last updated: 12th Oct 2023 at 03:04

Views: 141, Downloads: 2

P.FOR-231011_Bacterial Extraction

IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: Bacterial Extraction - Metadata

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Created: 11th Oct 2023 at 21:22, Last updated: 12th Oct 2023 at 03:04

Views: 134, Downloads: 1

P.FOR-230503-V1_Barcoding_Amplicon_Feb2023

IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: DNA Extraction - Metadata, Short Read Sequencing - Data Linked

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Created: 11th Oct 2023 at 21:33, Last updated: 12th Oct 2023 at 03:04

Views: 146, Downloads: 2

P.FLY-230509-V1_CD8-NX-Protocol

IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: Flow Cytometry - Data Linked

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Created: 12th Oct 2023 at 02:25, Last updated: 12th Oct 2023 at 03:04

Views: 146, Downloads: 1

P.FLY-230911-V1_IHC-CD8 Depletion

IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: Immunohistochemistry - Data Linked

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Created: 12th Oct 2023 at 02:49, Last updated: 12th Oct 2023 at 03:04

Views: 134, Downloads: 1

P.FLY-230523-V1_PET_CT_Imaging

IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: PET/CT Scan - Data Linked

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Created: 12th Oct 2023 at 02:54, Last updated: 12th Oct 2023 at 03:04

Views: 144, Downloads: 1

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