SOPs

What is a SOP?

463 SOPs visible to you, out of a total of 762

P.FOR-250702-V1_Mouse-lung-tissue-processing-for-barcode-analysis.docx

Hi-IMPAcTB

No description specified

Creators: None

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Protection against reinfection with Mycobacteri...

Assays: Library Prep - Metadata, Tissue Collection - Metadata

Created: 20th Oct 2025 at 15:09, Last updated: 20th Oct 2025 at 15:10

P.FOR-240116-V1_G2G_LibraryProtocol.docx

Hi-IMPAcTB

No description specified

Creators: None

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Protection against reinfection with Mycobacteri...

Assays: Bacterial Extraction - Metadata

Created: 20th Oct 2025 at 15:09, Last updated: 20th Oct 2025 at 15:09

P.FLY-251017-V1_G2G_Flow.docx

Hi-IMPAcTB

No description specified

Creators: None

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Protection against reinfection with Mycobacteri...

Assays: Flow Cytometry - Data Linked, Flow Cytometry Analysis - Data Linked

Created: 20th Oct 2025 at 15:09, Last updated: 20th Oct 2025 at 15:09

MF_Flow_Proteomics_Protocol

MetNet

No description specified

Creators: None

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Remodeling of self-assembled microvascular netw...

Assays: Mass Spectrometry Proteomics - Data Linked, Proteomics Analysis - Data Linked

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Created: 2nd Oct 2025 at 18:09, Last updated: 6th Oct 2025 at 19:00

P.KAM-250411-V2_MF_Cytokines.docx

MetNet

No description specified

Creators: None

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Remodeling of self-assembled microvascular netw...

Assays: Cytokine Luminex - Data Linked

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Created: 2nd Oct 2025 at 18:17, Last updated: 6th Oct 2025 at 19:00

MF_Cytokines

MetNet

No description specified

Creators: None

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Remodeling of self-assembled microvascular netw...

Assays: Cytokine Luminex - Data Linked

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Created: 2nd Oct 2025 at 18:08, Last updated: 6th Oct 2025 at 19:00

MF_flow_analysis

MetNet

No description specified

Creators: None

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Remodeling of self-assembled microvascular netw...

Assays: MVN Imaging Analysis - Data Linked

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Created: 2nd Oct 2025 at 18:09, Last updated: 6th Oct 2025 at 19:00

MF_MVN_imaging

MetNet

No description specified

Creators: None

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Remodeling of self-assembled microvascular netw...

Assays: Microfluidic Network Imaging - Data Linked

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Created: 2nd Oct 2025 at 18:10, Last updated: 6th Oct 2025 at 19:00

MF_RNAseq

MetNet

No description specified

Creators: None

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Remodeling of self-assembled microvascular netw...

Assays: Cell Extraction - Metadata, Gene Expression Analysis - Data Linked, Library Prep - Metadata, RNA Extraction - Metadata, Short Read Sequencing - Data Linked

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Created: 2nd Oct 2025 at 18:12, Last updated: 6th Oct 2025 at 19:00

MF_MVN_sop

MetNet

No description specified

Creators: None

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Remodeling of self-assembled microvascular netw...

Assays: Microfluidic Network Formation - Metadata

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Created: 2nd Oct 2025 at 18:11, Last updated: 6th Oct 2025 at 19:00

P.SHE-250716_V1-DC_Preparation.docx

MetNet

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Chemo-mechanical diffusion waves explain collec...

Assays: Dendritic Cell Preparation - Metadata

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Created: 16th Jul 2025 at 17:15

P.SHO-250605-V1_Collagen_Proteomics.docx

Shoulders Lab

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Shoulders Lab Individual Publications

Studies: Human cartilage model of the precocious osteoar...

Assays: LC - MS/MS (Proteomics) - Data Linked, Proteomics Analysis - Data Linked, iPSC Culture and Chondronoid Formation - Metadata

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Created: 9th Jun 2025 at 14:30

P.SHO-250605-V1_Collagen_Imaging.docx

Shoulders Lab

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Shoulders Lab Individual Publications

Studies: Human cartilage model of the precocious osteoar...

Assays: Cell Imaging - Data Linked, iPSC Culture and Chondronoid Formation - Metadata

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Created: 9th Jun 2025 at 14:27

P.SHO-250605-V1_Collagen_RNAseq.docx

Shoulders Lab

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Shoulders Lab Individual Publications

Studies: Human cartilage model of the precocious osteoar...

Assays: Gene Expression Analysis - Data Linked, Library Creation - Metadata, RNA Extraction - Metadata, Short Read Sequencing - Data Linked, iPSC Culture and Chondronoid Formation - Metadata

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Created: 9th Jun 2025 at 14:25

P.SHO-250605-V1_Collagen_iPSC.docx

Shoulders Lab

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: Shoulders Lab Individual Publications

Studies: Human cartilage model of the precocious osteoar...

Assays: iPSC Culture and Chondronoid Formation - Metadata

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Created: 9th Jun 2025 at 14:23

P.FRI-250515-V1_3DOpticalFlowAlgorithm.docx

MetNet

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Confined cell migration along extracellular mat...

Assays: Imaging Analysis - Data Linked

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Created: 15th May 2025 at 18:43

P.FRI-250515-V1_IntravitalMircoscopyofTumorCellInvasion.docx

MetNet

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Confined cell migration along extracellular mat...

Assays: Imaging Analysis - Data Linked, Intravital Microscopy

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Created: 15th May 2025 at 18:40

P.BAC-250424-V1_Modeling_ChromatinConformation.pdf

MetNet

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Chromatin conformation, gene transcription, and...

Assays: Modeling - Data Linked

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Created: 24th Apr 2025 at 17:59

P.BAC-250422-V1_Hi-C_ChromatinConformation.docx

MetNet

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Chromatin conformation, gene transcription, and...

Assays: Chromatin Sequencing Analysis - Data Linked, Library Creation - Metadata, Short Read Sequencing - Data Linked

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Created: 24th Apr 2025 at 17:50

P.BAC-250422-V1_SMLM_ChromatinConformation.docx

MetNet

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Chromatin conformation, gene transcription, and...

Assays: Cell Imaging - Data Linked, Imaging Analysis - Data Linked

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Created: 24th Apr 2025 at 17:45

P.BAC-250422-V1_PWS_ChromatinConformation.docx

MetNet

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Chromatin conformation, gene transcription, and...

Assays: Cell Imaging - Data Linked, Imaging Analysis - Data Linked

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Created: 24th Apr 2025 at 17:43

P.BAC-250422-V1_ChromatinElectronMicroscopy_ChromatinConformation.docx

MetNet

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Chromatin conformation, gene transcription, and...

Assays: Cell Imaging - Data Linked, Imaging Analysis - Data Linked

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Created: 24th Apr 2025 at 17:41

P.BAC-250422-V1_CellCulture_ChromatinConformation.docx

MetNet

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: MetNet

Studies: Chromatin conformation, gene transcription, and...

Assays: Cell Culture - Metadata

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Created: 24th Apr 2025 at 17:37

P.ALT-241202-V1_LAM_ELISA.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Antibody-Fab and -Fc features promote Mycobacte...

Assays: ELISA Assay - Data Linked

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Created: 23rd Apr 2025 at 17:01, Last updated: 23rd Apr 2025 at 19:35

P.ALT-241202-V1_Protocol_lmx_FcgR_assay.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Antibody-Fab and -Fc features promote Mycobacte...

Assays: FC-Receptor Binding Assay - Data Linked

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Created: 23rd Apr 2025 at 17:04, Last updated: 23rd Apr 2025 at 19:35

P.ALT-241204-V1_Protocol_lmx_comp_deposition_assay.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Antibody-Fab and -Fc features promote Mycobacte...

Assays: ADCD Analysis - Data Linked, Antibody Dependent Complement Deposition - Data...

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Created: 23rd Apr 2025 at 18:03, Last updated: 23rd Apr 2025 at 19:35

P.ALT-250418-V1_Protocol_mtb_restriction_assay_PatGrace.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Antibody-Fab and -Fc features promote Mycobacte...

Assays: Bacterial Survivability Restriction Assay - Dat..., Cell Extraction - Metadata, Cell Sorting – Data Linked

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Created: 23rd Apr 2025 at 16:42, Last updated: 23rd Apr 2025 at 19:35

P.ALT-250314-V1_scRNA_PG.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Antibody-Fab and -Fc features promote Mycobacte...

Assays: Cell Extraction - Metadata, Short Read Sequencing - Data Linked

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Created: 23rd Apr 2025 at 16:44, Last updated: 23rd Apr 2025 at 19:35

P.ALT-250314-V1_Analysis-of-infection-scRNA.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Antibody-Fab and -Fc features promote Mycobacte...

Assays: Single Cell Clustering - Data Linked

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Created: 23rd Apr 2025 at 17:59, Last updated: 23rd Apr 2025 at 19:35

P.ALT-241112-V1_Protocol_flow_staining.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Antibody-Fab and -Fc features promote Mycobacte...

Assays: Flow Cytometry - Data Linked, Flow Cytometry Analysis - Data Linked, Mouse Challenge – Metadata

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Created: 23rd Apr 2025 at 16:32, Last updated: 23rd Apr 2025 at 19:35