SOPs

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3 SOPs matching the given criteria: (Clear all filters)

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UNIX script for snRNA-Seq processing

iRhythmics

No description specified

Creator: Markus Wolfien

Submitter: Markus Wolfien

Investigations: 1 hidden item

Studies: Single nuclei comparison

Assays: Single nuclei RNA-Seq analysis of Fzt:DU and BL...

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Created: 16th Jan 2020 at 12:26, Last updated: 27th Feb 2020 at 11:07

Nuclei isolation for single nuclei RNA-seq

iRhythmics

This file contains the detailed experimental protocol to isolate nuclei from murine hearts.

Creators: Markus Wolfien, Anne-Marie Galow

Submitter: Markus Wolfien

Investigations: 1 hidden item

Studies: Single nuclei characterisation of adult mammali..., integrative cluster analysis - proliferative ca...

Assays: Single nuclei RNA-Seq analysis of Fzt:DU mice, integrative cluster analysis of single cell and...

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Created: 24th Jan 2020 at 13:22

R script for single nuclei analysis

iRhythmics

This R-script contains the single nuclei analysis for our Fzt:DU and BL6 data, namely bustools file integration, preprocessing, scaling, clustering, marker indentification and annotation of markers and RNAvelocity computation.

Creator: Markus Wolfien

Submitter: Markus Wolfien

Investigations: 1 hidden item

Studies: Single nuclei comparison

Assays: Single nuclei RNA-Seq analysis of Fzt:DU and BL...

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Created: 16th Jan 2020 at 16:29, Last updated: 17th Jan 2020 at 09:47

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