Events
Crash course of Mathematical modelling, for any learners who want to use models to better understand and assess COVID-19 policies around the world!
This course aims at anyone who seeks to understand and assess the utility of mathematical models to make a prediction which could play a key role in government policymaking, as well as a research strategy for pandemic diseases such as COVID-19. The strategies of ‘learning by example’ and ‘learning by doing’ will be here instantiated as learning how
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Start Date: 30th Nov 2020
End Date: 2nd Dec 2020
Event Website: https://elixir-luxembourg.org/events/2020_11_30_COVID19_modelling_training
Country: Not specified
City: online course
Protein Engineering Congress EU
Start Date: 24th Nov 2020
End Date: 1st Dec 2020
Event Website: https://www.proteinengineeringcongresseu.com/events/protein-engineering-congress-eu-2020
Country: Not specified
City: Not specified
This workshop will be organized by the GMDS project group "FAIRe Dateninfrastrukturen für die Biomedizinische Informatik", established in early 2019. The aim of this project group is to present the activities in various projects and at different German research locations with regard to infrastructures for FAIRes (Finadable, Accessible, Interoperable, Reusable) data management. To this end, a joint exchange of experience will take place in order to plan joint concepts (e.g. dissemination of FAIR,
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Country: Germany
City: Berlin
Managing your data and metadata well is an important research skill. Good data management enables the preparation, handling, storing, sharing, and reuse of data. These attributes of good data management equates to efficient research and saving of time and resources. Data management tools, utilizing data standards and best practices can help to make your research data and models FAIR (Findable, Accessible, Interoperable and Reusable).
SEEK, is a web-based (or locally installed) resource platform
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Start Date: 6th Nov 2019
End Date: 7th Nov 2019
Event Website: https://digitallifenorway.org/arrangementer/workshop-getting-your-hands-on-data-management
Country: Norway
City: Trondheim
Aim
Multicellular spatial models have become an essential tool in quantitative biology and multiple model formalisms and simulation frameworks coexist. Progress towards software interoperability and reproducibility requires a novel model description language and conversion library, complementing SBML. Building on the community‘s practical experiences with multiple formalisms and simulators, we aim at (1) defining the concept for a multicellular language while simultaneously (2) exploring automated
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Start Date: 1st Sep 2019
End Date: 4th Sep 2019
Event Website: https://multicellml.org/wiki/doku.php?id=hackathon
Country: Germany
City: Dresden
FAIRDOM PALS and users meeting 2019 is happening in Heidelberg, as a satellite meeting of the COMBINE (COmputational Modeling in BIology Network) meeting.
FAIRDOM is a research infrastructure offering data management support. The SEEK software is designed as registry and storage place for data, models, biological samples, processes, publications and presentations, and at the same time as yellow pages for projects, people and events. SEEK is implemented as central data management platform FAIRDOMhub
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Start Date: 18th Jul 2019
End Date: 19th Jul 2019
Event Website: https://fair-dom.org/events/fairdom-pals-users-meeting-2019/
Country: Germany
City: Heidelberg
The first Digital Salmon industry workshop raised awareness of the Digital Salmon vision and engaged major industry players in discussions on data sharing and reuse, guidelines and best practices for private-public collaboration. The workshop was a success, and a Digital Salmon working group was formed, comprising industry, academia and funding bodies. Its first task is to develop a white paper to be presented to the industry in summer of 2020.
Start Date: 5th Jun 2019
End Date: 6th Jun 2019
Event Website: Not specified
Country: Norway
City: Ski
FAIRDOM training for HOTSOLUTE /EraCoBioTech
Start Date: 30th Apr 2019
End Date: 30th Apr 2019
Event Website: Not specified
Country: Germany
City: Essen
During this 3-day course, attendees will learn basic techniques for modeling of biochemical networks including data access and storage due to the FAIR principles. The first day introduces kinetic modeling techniques which will be illustrated and exercised with COPASI. The second day continues with principles of stoichiometric and constraint-based modeling coupled with hands on exercises using CellNetAnalyzer. The third day SABIO-RK is used as a resource for kinetic data and FAIRDOMHub/SEEK is
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Start Date: 18th Mar 2019
End Date: 20th Mar 2019
Event Website: http://copasi.org/denbi-modsim/workshop_2019/
Country: Germany
City: 69120 Heidelberg
Start Date: 28th Oct 2018
End Date: 1st Nov 2018
Event Website: http://www.biosyl.org/news/icsb-2018
Country: France
City: Lyon
The 16th conference on Computational Methods in Systems Biology (CMSB 2018) will take place on the 12th to 14th September 2018 in Brno, Czech Republic. Its aim is to bring together researchers from across biological, mathematical, computational, and physical sciences who are interested in the study, modelling, simulation, advanced analysis, and design of biological systems.
CMSB 2018 will be hosted at Faculty of Informatics, Masaryk University, Brno. Brno is the city where the modern genetics has
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Country: Czech Republic
City: Brno
The 10th Young Scientists School “Systems biology and Bioinformatics” SBB-2018 will be held on 27–31th of August 2018 in Novosibirsk, Russia
Bioinformatics is a rapidly developing field of knowledge. Each of the past Young Scientists Schools concerned topics urgent at those times. To preserve this tradition, the SBB-2016 will be dedicated to bioinformatics and systems biology in such areas as:
Genomics and evolutionary bioinformatics
Structural biology and molecular dynamics
Molecular-genetic
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Start Date: 27th Aug 2018
End Date: 31st Aug 2018
Event Website: http://conf.bionet.nsc.ru/sbb2018/en/
Country: Russian Federation
City: Novosibirsk
The overarching integrating power of computational modelling, from systems biology to systems medicine
Country: Germany
City: Bremen
Participants will learn how to structure and share complex data in a Findable, Accessible, Interoperable and Reusable (FAIR) manner. Hands-on sessions, lectures and software demonstrations will provide attendees with the necessary skills to apply components of the FAIRDOM infrastructure in their daily work for interrelating and exchanging data, models and corresponding information.
FAIRDOM is a research infrastructure offering data management support. The SEEK software is designed as registry and
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Country: Germany
City: Bremen
During this 3-day course, attendees will learn basic techniques for modeling of biochemical networks including data access and storage due to the FAIR principles. The first day introduces principles of stoichiometric and constraint-based modeling coupled with hands on exercises using CellNetAnalyzer. The second day continues with kinetic modeling techniques which will be illustrated and exercised with COPASI. The third day SABIO-RK is used as a resource for kinetic data and FAIRDOM Hub/SEEK is
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Start Date: 24th Apr 2018
End Date: 26th Apr 2018
Event Website: http://denbi-modsim.de/workshop_2018
Country: Germany
City: 39106 Magdeburg
Our 2018 DigiSal project meeting is held as a satellite meeting of Digital Life 2018 (https://digitallifenorway.org/arrangementer/digitallife-2018).
Most of DS18 will be spent on breakout sessions to work on upcoming publications. Task leaders will prepare:
* Abstracts to DLN18. (Deadline was 15 Feb.) Presenting DigiSal progress here rather than at DS18 frees up time for the paper preparation sessions.
* Identify two papers in preparation, which will be worked on at DS18: Title, first and
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Start Date: 21st Mar 2018
End Date: 22nd Mar 2018
Event Website: Not specified
Country: Norway
City: Bergen
Abstracts and posters from DigiSal for Digital Life 2018.
Start Date: 20th Mar 2018
End Date: 21st Mar 2018
Event Website: https://digitallifenorway.org/arrangementer/digitallife-2018
Country: Norway
City: Bergen
We are excited to announce our 2017 SynBio Data Management Training Day. The event is co-located with Synthetic Biology UK, in Manchester. The venue will be the Manchester Institute for Biotechnology (http://www.mib.ac.uk/contact/).
Topics that will be covered include
- Model management in FAIRDOMHub
- Publishing using FAIRDOMHub
- Samples in FAIRODMHub
On top of this we will have talks about general data management using FAIRDOM, and also smart publications.
Participation is free. We have limited
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Start Date: 29th Nov 2017
End Date: 29th Nov 2017
Event Website: https://fair-dom.org/synbiotraining
Country: United Kingdom
City: Manchester
Target audience: Wet-lab scientists and people dealing with experimental and/or clinical data for research
Topics include:
- Best practice data structuring (spreadsheets) for experimental and (clinical) samples data
- Comprehensive and unambiguous data description and annotation
- Standard formats and terminologies for data and metadata
- Guidelines for reporting data (Minimum information standards)
- Annotation tools (e.g. RightField: http://www.rightfield.org.uk)
- Using SEEK & FAIRDOMhub
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Start Date: 22nd Nov 2017
End Date: 23rd Nov 2017
Event Website: Not specified
Country: Germany
City: Hünfeld
Start Date: 6th Aug 2017
End Date: 6th Aug 2017
Event Website: http://co.mbine.org/events/tutorial2017
Country: United States
City: Blacksburg, Virginia
Country: Germany
City: Dresden
The meeting will provide a great opportunity for discussion between modellers, experimentalists and clinicians and to organize and harmonize our future work within the LiSyM network on the grassroot level.
All PhD students as well as all PostDocs of the LiSyM network are kindly requested to register by February 1st
Start Date: 3rd May 2017
End Date: 5th May 2017
Event Website: https://goo.gl/forms/G39OTpkpa8uLi0qJ2
Country: Germany
City: Hünfeld
This event is a jointly organized Data Management PALs Meeting that involves PALs from the German LiSyM (Liver Systems Medicine) network and from the ERASysAPP (ERA-Net for Systems Biology Applications) initiative. PALs (Project Area Liaisons) are the front line experts of the data management teams of these projects. They act as data management advocates and help gathering user requirements and testing potential data management solutions. An important part of the meeting will be to gather the
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Start Date: 2nd May 2017
End Date: 3rd May 2017
Event Website: Not specified
Country: Germany
City: 36088 Hünfeld bei Fulda
Good data and model management improves the longevity and impact of your interdisciplinary research. FAIRDOM offers software and expertise to support you in better managing your interdisciplinary life-science projects, particularly in systems and synthetic biology. If you have never heard of data and model management, or are curious about it, or you are an expert keen to exchange ideas, our user meeting is the place for you!
At the meeting you can
- Learn why data and model management is important,
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Start Date: 15th Sep 2016
End Date: 15th Sep 2016
Event Website: http://fair-dom.org/communities/users/barcelona-2016-first-user-meeting/
Country: Spain
City: barcelona
Approximate dates of plant growth and harvesting by Sarah Hodge and Andrew Millar, University of Edinburgh
Country: United Kingdom
City: Edinburgh
This is just a placeholder, to be edited
Start Date: 1st Jun 2016
End Date: Not specified
Event Website: Not specified
Country: Switzerland
City: Zurich
Here we collect all the presentations, hands on instructions and documentation for Kinetics on the move Workshop on Data for Computational Modeling
Start Date: 30th May 2016
End Date: 31st May 2016
Event Website: http://www.h-its.org/de/research/sdbv/veranstaltungen/kinetics-on-the-move-practical-workshop-on-data-for-computational-modelling/
Country: Not specified
City: Heidelberg
The second project review meeting took place on May 24-25, 2016, at the University of Luxembourg, Luxembourg. This was a theory meeting between the team members to discuss research progress and plans for the project.
Country: Luxembourg
City: Luxembourg
FAIRDOM team is inviting all PALs to participate in the second FAIRDOM PALs meeting. The event will take place on Dec. 9-10th , 2015 in Munich, immediately after the ERAsysAPP exchange meeting scheduled for Dec 8-9th.
Beginning at 14:00 on Dec 9h, it will continue till 13:00 on Dec. 10th. Please, consider this when booking your plane/train tickets as well as hotel rooms.
The FAIRDOM team considers the meeting as an opportunity to update the PALs on available data/model management solutions, recent
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Start Date: 9th Dec 2015
End Date: 10th Dec 2015
Event Website: Not specified
Country: Germany
City: Munich
This workshop is for computational biologists and experimentalists who wish to learn about standards, citeable data, about how to make scientific results sustainable, available through open repositories, and about how to find and reuse other people’s works. It comprises of a mixture of lectures and hands-on sessions. We will teach you the major standards and tools that support these standards, as well as steps towards encoding and publishing reproducible modeling results. Topics include data
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Start Date: 14th Sep 2015
End Date: 15th Sep 2015
Event Website: https://sems.uni-rostock.de/reproducible-and-citable-data-and-models/
Country: Germany
City: Rostock-Warnemünde