Events

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73 Events visible to you, out of a total of 314

During this 3-day course, attendees will learn basic techniques for modeling of biochemical networks including data access and storage due to the FAIR principles. The first day introduces principles of stoichiometric and constraint-based modeling coupled with hands on exercises using CellNetAnalyzer. The second day continues with kinetic modeling techniques which will be illustrated and exercised with COPASI. The third day SABIO-RK is used as a resource for kinetic data and FAIRDOM Hub/SEEK is ...

Start Date: 24th Apr 2018

End Date: 26th Apr 2018

Event Website: http://denbi-modsim.de/workshop_2018

Country:  Germany

City: 39106 Magdeburg

Our 2018 DigiSal project meeting is held as a satellite meeting of Digital Life 2018 (https://digitallifenorway.org/arrangementer/digitallife-2018).

Most of DS18 will be spent on breakout sessions to work on upcoming publications. Task leaders will prepare:

  • Abstracts to DLN18. (Deadline was 15 Feb.) Presenting DigiSal progress here rather than at DS18 frees up time for the paper preparation sessions.

  • Identify two papers in preparation, which will be worked on at DS18: Title, first and ...

Start Date: 21st Mar 2018

End Date: 22nd Mar 2018

Event Website: Not specified

Country:  Norway

City: Bergen

Abstracts and posters from DigiSal for Digital Life 2018.

Start Date: 20th Mar 2018

End Date: 21st Mar 2018

Event Website: https://digitallifenorway.org/arrangementer/digitallife-2018

Country:  Norway

City: Bergen

We are excited to announce our 2017 SynBio Data Management Training Day. The event is co-located with Synthetic Biology UK, in Manchester. The venue will be the Manchester Institute for Biotechnology (http://www.mib.ac.uk/contact/).

Topics that will be covered include

  • Model management in FAIRDOMHub
  • Publishing using FAIRDOMHub
  • Samples in FAIRODMHub

On top of this we will have talks about general data management using FAIRDOM, and also smart publications.

Participation is free. We have limited ...

Start Date: 29th Nov 2017

End Date: 29th Nov 2017

Event Website: https://fair-dom.org/synbiotraining

Country:  United Kingdom

City: Manchester

Target audience: Wet-lab scientists and people dealing with experimental and/or clinical data for research

Topics include:

  • Best practice data structuring (spreadsheets) for experimental and (clinical) samples data
  • Comprehensive and unambiguous data description and annotation
  • Standard formats and terminologies for data and metadata
  • Guidelines for reporting data (Minimum information standards)
  • Annotation tools (e.g. RightField: http://www.rightfield.org.uk)
  • Using SEEK & FAIRDOMhub ...

Start Date: 22nd Nov 2017

End Date: 23rd Nov 2017

Event Website: Not specified

Country:  Germany

City: Hünfeld

No description specified

Start Date: 6th Aug 2017

End Date: 6th Aug 2017

Event Website: http://co.mbine.org/events/tutorial2017

Country:  United States

City: Blacksburg, Virginia

No description specified

Start Date: 16th May 2017

End Date: 17th May 2017

Event Website: http://seek.lisym.org/events/3

Country:  Germany

City: Dresden

The meeting will provide a great opportunity for discussion between modellers, experimentalists and clinicians and to organize and harmonize our future work within the LiSyM network on the grassroot level.

All PhD students as well as all PostDocs of the LiSyM network are kindly requested to register by February 1st

Start Date: 3rd May 2017

End Date: 5th May 2017

Event Website: https://goo.gl/forms/G39OTpkpa8uLi0qJ2

Country:  Germany

City: Hünfeld

This event is a jointly organized Data Management PALs Meeting that involves PALs from the German LiSyM (Liver Systems Medicine) network and from the ERASysAPP (ERA-Net for Systems Biology Applications) initiative. PALs (Project Area Liaisons) are the front line experts of the data management teams of these projects. They act as data management advocates and help gathering user requirements and testing potential data management solutions. An important part of the meeting will be to gather the ...

Start Date: 2nd May 2017

End Date: 3rd May 2017

Event Website: Not specified

Country:  Germany

City: 36088 Hünfeld bei Fulda

Good data and model management improves the longevity and impact of your interdisciplinary research. FAIRDOM offers software and expertise to support you in better managing your interdisciplinary life-science projects, particularly in systems and synthetic biology. If you have never heard of data and model management, or are curious about it, or you are an expert keen to exchange ideas, our user meeting is the place for you! At the meeting you can

  • Learn why data and model management is important, ...

Start Date: 15th Sep 2016

End Date: 15th Sep 2016

Event Website: http://fair-dom.org/communities/users/barcelona-2016-first-user-meeting/

Country:  Spain

City: barcelona

Approximate dates of plant growth and harvesting by Sarah Hodge and Andrew Millar, University of Edinburgh

Start Date: 1st Jun 2016

End Date: 1st Jul 2016

Event Website: https://www.amillar.org

Country:  United Kingdom

City: Edinburgh

This is just a placeholder, to be edited

Start Date: 1st Jun 2016

End Date: Not specified

Event Website: Not specified

Country:  Switzerland

City: Zurich

Here we collect all the presentations, hands on instructions and documentation for Kinetics on the move Workshop on Data for Computational Modeling

Country: Not specified

City: Heidelberg

The second project review meeting took place on May 24-25, 2016, at the University of Luxembourg, Luxembourg. This was a theory meeting between the team members to discuss research progress and plans for the project.

Start Date: 24th May 2016

End Date: 25th May 2016

Event Website: http://wwwen.uni.lu/lcsb

Country:  Luxembourg

City: Luxembourg

FAIRDOM team is inviting all PALs to participate in the second FAIRDOM PALs meeting. The event will take place on Dec. 9-10th , 2015 in Munich, immediately after the ERAsysAPP exchange meeting scheduled for Dec 8-9th. Beginning at 14:00 on Dec 9h, it will continue till 13:00 on Dec. 10th. Please, consider this when booking your plane/train tickets as well as hotel rooms.

The FAIRDOM team considers the meeting as an opportunity to update the PALs on available data/model management solutions, recent ...

Start Date: 9th Dec 2015

End Date: 10th Dec 2015

Event Website: Not specified

Country:  Germany

City: Munich

This workshop is for computational biologists and experimentalists who wish to learn about standards, citeable data, about how to make scientific results sustainable, available through open repositories, and about how to find and reuse other people’s works. It comprises of a mixture of lectures and hands-on sessions. We will teach you the major standards and tools that support these standards, as well as steps towards encoding and publishing reproducible modeling results. Topics include data ...

Start Date: 14th Sep 2015

End Date: 15th Sep 2015

Event Website: https://sems.uni-rostock.de/reproducible-and-citable-data-and-models/

Country:  Germany

City: Rostock-Warnemünde

The annual international conference on Intelligent Systems for Molecular Biology (ISMB) is the major meeting of the International Society for Computational Biology (ISCB). Over the past 22 years the ISMB conference has grown to become the world's largest bioinformatics/computational biology conference. Joining forces with the European Conference on Computational Biology (14th Annual Conference) ISMB/ECCB 2015 will be the year's most important computational biology event globally. The conferences ...

Start Date: 10th Jul 2015

End Date: 14th Jul 2015

Event Website: https://www.iscb.org/ismbeccb2015

Country:  Ireland

City: Dublin

The BBSRC has recently funded the UK Multiscale Biology network, motivated by BBSRC strategic discussions which identified ‘Multi-Scale Biology’ (MSB) as a key area of research and capability that will be at the forefront of bioscience research over the next 5-10 years. The network will aim to: • facilitate the exploitation of areas of synergy between researchers across the UK in the broad area of multi-scale biology (MSB); • raise awareness of the benefits of MSB; • identify areas that are most ...

Start Date: 1st Jun 2015

End Date: 1st Jun 2015

Event Website: http://www.multiscalebiology.org.uk/events/event/springboard/

Country:  United Kingdom

City: Nottingham

1st FAIRDOM + EraSysApp PALs meeting will be co-located with ERASysAPP – EXCHANGE: Networking and Info Day in Berlin, on 16 -17 April 2015

April 16th ABION Spreebogen Hotel, Salon Charlottenburg

18:00 -22:00 Social gathering and informal presentations with FAIRDOM team + old PALs +new PALs (with food and drinks served)

April 17th ABION Spreebogen Hotel, Salon Bellevue

9:00 -9:15 Short introduction from funders (Christian Rückert, PtJ)

9:15 -10.00 Warming up FAIRDOM, FAIRDOMHub and openSEEK ...

Start Date: 16th Apr 2015

End Date: 17th Apr 2015

Event Website: Not specified

Country:  Germany

City: Berlin

Semantic web applications and tools for life science.

Since 2008, the SWAT4LS Workshop has provided a platform for the presentation and discussion of the benefits and limits of applying web-based information systems and semantic technologies in the domains of health care and life sciences. SWAT4LS will provide the same open and stimulating environment that has previously brought together researchers, developers, and users, from various fields including eHealth, biomedical and clinical informatics, ...

Start Date: 9th Dec 2014

End Date: 11th Dec 2014

Event Website: http://www.swat4ls.org/workshops/berlin2014/

Country:  Germany

City: Berlin

The kickoff meeting of CropClock team took place in November 12, 2014 at the Max Plank Institute (MPIPZ, http://www.mpipz.mpg.de/en), Kologne, Germany. The goal for this meeting was for the members of the various teams to get acquainted with each other’s expertise and to discuss the following items: 1) Logistics about the project start, 2) Data that need to be shared, 3) Matlab code that needs to shared among the teams. The initial plan of action for data sharing was also laid out.

Start Date: 12th Nov 2014

End Date: 12th Nov 2014

Event Website: http://www.mpipz.mpg.de/en

Country:  Germany

City: Kologne

This mini-symposium, colocated at the ECMTB in Gothenburg, presents the state-of-the-art in computational methods for multicellular systems biology. It brings together developers and users of this software to identify common approaches and future challenges concerning multiscale integration, model specification, model exchange, scalability, workflow management as well as compliance to standards and guidelines. The session thus aims to provide an overview of the available modeling and simulation ...

Start Date: 19th Jun 2014

End Date: 19th Jun 2014

Event Website: https://imc.zih.tu-dresden.de/wiki/multisysbio2014/

Country:  Sweden

City: Gothenburg

Approximate dates of plant growth and harvesting by Imaizumi lab, University of Washington in Seattle

Start Date: 1st Jun 2014

End Date: 1st Jul 2017

Event Website: Not specified

Country:  United States

City: Seattle

Systems Biology is one of the most prominent newly emerging interdisciplinary science areas. By connecting fields such as genomics, proteomics, cell biology, medicine, molecular biology, biochemistry and genetics, with mathematics, bioinformatics, engineering and computation, it enables discovery of yet unknown principles underlying the functioning of living cells. At the same time testable and predictive models of complex cellular pathways and eventually of whole cells are generated, which are ...

Start Date: 2nd Mar 2014

End Date: 8th Mar 2014

Event Website: http://www.sysbio2014.org/

Country:  Austria

City: Innsbruck

7th All hands PALs + SEEK users meeting will be co-located with Computational Modeling in Biology Network (COMBINE) meeting taking place from 16th to 20th of September 2013 in Paris. COMBINE is an initiative to coordinate the development of the various community standards and formats, details to meeting agenda and location here: http://mbine.org/events/COMBINE_2013

We plan to arrive on Wednesday, 18th, to participate in COMBINE on Thursday and Friday morning, and to have PALs- only sessions on ...

Start Date: 18th Sep 2013

End Date: 20th Sep 2013

Event Website: Not specified

Country:  France

City: Paris

No description specified

Start Date: 18th Sep 2013

End Date: 18th Sep 2013

Event Website: Not specified

Country:  Germany

City: Berlin

No description specified

Start Date: 9th Jun 2013

End Date: 10th Jun 2013

Event Website: Not specified

Country:  Netherlands

City: Amsterdam

No description specified

Start Date: 6th Feb 2013

End Date: 8th Feb 2013

Event Website: Not specified

Country:  Germany

City: Berlin

No description specified

Start Date: 8th Jan 2013

End Date: 8th Jan 2013

Event Website: Not specified

Country:  Netherlands

City: Amsterdam

The next All Hands PALs meeting will take place on Thursday 29th and Friday 30th November 2012 in Heidelberg. The meeting will start on Thursday morning (arriving in Heidelberg on Wednesday evening), and finishing after lunch on Friday, so that you can get to home before weekend starts.

Meeting agenda

Thursday 29th November 9:15 Arriving at HITS 9:30 – 10:00 Introduction to PALs meeting 10:00 – 10:45 Review of new SEEK features. 10:45 – 11:00 Coffee break 11:00 – 12:00 An update on SEEK BioSamples ...

Start Date: 29th Nov 2012

End Date: 30th Nov 2012

Event Website: Not specified

Country:  Germany

City: Heidelberg

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