UNIX script for snRNA-Seq processing Version 2
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UNIX script for snRNAseq Wolfien et al.txt
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Creators and Submitter
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Created: 16th Jan 2020 at 13:26
Last updated: 27th Feb 2020 at 12:07
Last used: 19th May 2022 at 03:10
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Version 2 (latest) Created 27th Feb 2020 at 12:07 by Markus Wolfien
Updated zenodo DOI for generated and deployed kallisto index
Related items
https://orcid.org/0000-0002-1887-4772
Projects that do not fall under current programmes.
Projects: Manchester Institute for Biotechnology, ICYSB 2015 - International Practical Course in Systems Biology, iRhythmics, INBioPharm, EmPowerPutida, Systo models, MycoSynVac - Engineering Mycoplasma pneumoniae as a broad-spectrum animal vaccine, Multiscale modelling of state transitions in the host-microbiome-brain network, Extremophiles metabolsim, NAD COMPARTMENTATION, Agro-ecological modelling, Bergen(Ziegler lab) project AF-NADase, NAMPT affinity, Stress granules, Modelling COVID-19 epidemics, Bio-crop, ORHIZON, Coastal Data, SASKit: Senescence-Associated Systems diagnostics Kit for cancer and stroke, hybrid sequencing, HOST-PAR, BioCreative VII, Boolean modeling of Parkinson disease map, Orphan cytochrome P450 20a1 CRISPR/Cas9 mutants and neurobehavioral phenotypes in zebrafish, Selective Destruction in Ageing, Viral Metagenomic, Synthetic biology in Synechococcus for bioeconomy applications (SynEco), testproject, SDBV ephemeral data exchanges, Test project, The BeeProject, PHENET, LiceVault, EbN1 Systems Biology
Web page: Not specified
The project addresses the generation and establishment of programmed pacemaker cells for an in vitro drug testing possibility to perform predictive tests. This may lead to an improved treatment of cardiac arrhythmias or an accurate identification of potential drug molecules at a very early stage of development. Important benefits will arise in verifying the safety of a wide variety of medicines while reducing animal testing. For more information you may visit our project website at ...
Programme: Independent Projects
Public web page: https://irhythmics.med.uni-rostock.de/
This study contains our snRNA-Seq based comparison of whole hearts from Fzt.DU and Bl6 mice published in Cardiovascular Research.
Submitter: Markus Wolfien
Investigation: 1 hidden item
Assays: Single nuclei RNA-Seq analysis of Fzt:DU and BL6 mice
Submitter: Markus Wolfien
Biological problem addressed: Gene Expression
Investigation: 1 hidden item
Study: Single nuclei comparison
