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Created at: 27th Feb 2020 at 12:09
File contains the detailed cluster names for each data set, number of nuclei per cluster, average reads per nucleus, and average reads per cluster.
This file contains the IDs, adj. p-values and official gene names of the top 100 marker genes (where applicable) for each of the identified cluster.
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- UNIX script for snRNAseq Wolfien et al.txt
This R-script contains the single nuclei analysis for our Fzt:DU and BL6 data, namely bustools file integration, preprocessing, scaling, clustering, marker indentification and annotation of markers and RNAvelocity computation.
- R script for snRNAseq Wolfien et al.R
This PDF contains a dotplot indicating the gene expression of the top 100 markers (where applicable) for each of the identified 23 clusters.
This file contains a detailed description of the underlying experimental procedure and the computational analysis.
- Materials and Methods snRNA-seq.pdf
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Created: 27th Feb 2020 at 12:09
Last updated: 27th Feb 2020 at 12:09