Projects: NL-Bioimaging FAIR Metadata Templates
Institutions: University of Leiden
https://orcid.org/0000-0002-0615-9616Projects: COVID-19 Disease Map
Institutions: The International Clinical Research Center of St. Anne's University Hospital Brno
https://orcid.org/0000-0002-1768-3894Expertise: Epigenetics, Liver, Cancer research, Metabolomics, Transcriptomics, Proteomics, Lipids
Principal Investigator International Clinical Research Center (FNUSA-ICRC) Brno Czech Republic
I'm currently a Postdoc at the Institute of Technical Biochemistry in Stuttgart University. My project involves the experimental validation of the Indirect Enzymatic Dehydration Via Phosphorylation and Dephosphorylation of Isobutanol for Isobutene production.
Expertise: Dynamic modelling, Biochemistry, Metabolomics, Programming, Data Integration, Parameter estimation
Tools: AMICI, Python, c++, Parameter estimation, PEtab
Projects: INBioPharm
Institutions: Norwegian University of Science and Technology
Projects: XyloCut
Institutions: Delft University of Technology (DUT)
https://orcid.org/0000-0003-2120-1859Assistant professor working on industrial and environmental microorganisms
Associate Professor for Systems Biomedicine, Luxembourg Centre for Systems Biomedicine, University of Luxembourg
Expertise: Metabolic Control Analaysis, Metabolomics, Metabolic Networks
Tools: Metabolomics, Transcriptomics
POSITION Professor of Systems Medicine/Biology at the Academic Medical Center, Amsterdam and University Medical Center Groningen, Groningen, The Netherlands
RESEARCH My major projects focus on understanding the etiology of metabolic syndrome and its comorbidities type2 diabetes and cardiovascular disease. To get grip on the sequence of events in disease progression we make use of longitidunal models and apply multiscal systems biology approaches.
PUBLICATIONS
My published work can be found at: ...
Team leader "Quantitative Microbial Phenotyping" Institute of Bio- and Geosciences, IBG-1: Biotechnology Forschungszentrum Jülich GmbH 52425 Jülich, Germany
Projects: SulfoSys - Biotec
Institutions: University Bielefeld
Expertise: Bioinformatics, Data Management, Transcriptomics, Proteomics, Metabolomics, Databases, Data Integration
Tools: Bioinformatics, Data Management, Databases, R, Java
Projects: MOSES, ExtremoPharm, ZucAt, GenoSysFat, DigiSal, EraCoBiotech 2 nd call proposal preparation, FAIRDOM & LiSyM & de.NBI Data Structuring Training
Institutions: University of Stuttgart, University of Hohenheim, Norwegian University of Life Sciences, Norwegian University of Science and Technology
https://orcid.org/0000-0002-7973-9902Expertise: Biochemistry, coupling metabolome and environome, rapid sampling experiments, Systems Biology, carbon metabolism, Stoichiometric modelling, Proteomics, Metabolomics, yeast, fungi, Dynamics and Control of Biological Networks
Tools: Biochemistry and protein analysis, Metabolomics, Matlab, Fermentation, Chromatography, Material balance based modeling, stimulus response experiments, continuous cultivation, Enzyme assay, Mass spectrometry (LC-MS/MS), HPLC, GC and LC/MS analysis of metabolites, ODE, Parameter estimation
I've become a SysMO DB PAL for MOSES project in 2007 being a post-doc in lab of Prof. Matthias Reuss at University of Stuttgart. In the MOSES project, our major efforts were in the experimental data acquisition for dynamic model of primary carbon and anaerobic energy metabolism in yeast. The model implements prediction of perturbations of two types: glucose pulse and temperature jump. We implement “stimulus-response” methodology for the unraveling the dynamic structure of the network and to ...
Projects: SilicoTryp, SYSTERACT, SynBio4Flav
Institutions: University of Glasgow, Chalmers University of Technology
https://orcid.org/0000-0002-3593-5792Projects: MetApp
Institutions: INSA Toulouse
Expertise: Metabolomics, metabolism, Fluxomics, metabolic systems biology
Projects: ICYSB 2015 - International Practical Course in Systems Biology
Institutions: University of Milano-Bicocca
I am a PostDoc working on yeast metabolomics. During my PhD I studied the interplay between metabolism, cell cycle and signalling, mainly focusing on the Snf1/AMPK pathway. I am currently interested in studying metabolic rewiring caused by different nutrients, generating high-throughput data suitable for modelling.
Projects: SilicoTryp
Institutions: University of Glasgow
Expertise: Metabolomics
Tools: Metabolomics, Cell culture, GC and LC/MS analysis of metabolites
Projects: STREAM, SilicoTryp
Institutions: University of Groningen
Expertise: Transcriptomics, Metabolomics, Systems Biology
I am currently Professor of Systems Biology at the University of Manchester. My research interests focus on the development of innovative computational approaches for post-genomic systems biology, statistical methods for high-throughput biological experimentation and the dynamic modelling of cellular systems. This work is highly interdisciplinary and usually involves close collaboration with experimental biologists and clinicians. A recurrently theme is the study of complex cellular networks at ...
Projects: BaCell-SysMO
Institutions: University of Greifswald
Projects: SulfoSys
Institutions: University of Braunschweig
Expertise: Metabolomics
Projects: SulfoSys
Institutions: University of Braunschweig
Expertise: Metabolomics
Projects: SUMO
Institutions: Max Planck Institute for Dynamics of Complex Technical Systems
Projects: STREAM, SCaRAB, WineSys, INBioPharm
Institutions: SINTEF, Norwegian University of Science and Technology
Expertise: Metabolomics