SEEK ID: https://fairdomhub.org/people/301
Location: Germany
ORCID: Not specified
Joined: 7th May 2009
Related items
- Programmes (1)
- Projects (1)
- Institutions (1)
- Assays (2)
- Data files (4+2)
- SOPs (1+4)
- Publications (1)
- Presentations (0+1)
SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB, SysMO Funders, SilicoTryp, Noisy-Strep
Web page: http://sysmo.net/
BaCell-SysMO 2 Modelling carbon core metabolism in Bacillus subtilis – Exploring the contribution of protein complexes in core carbon and nitrogen metabolism.
Bacillus subtilis is a prime model organism for systems biology approaches because it is one of the most advanced models for functional genomics. Furthermore, comprehensive information on cell and molecular biology, physiology and genetics is available and the European Bacillus community (BACELL) has a well-established reputation for applying ...
Programme: SysMO
Public web page: http://www.sysmo.net/index.php?index=53
Organisms: Bacillus subtilis
extracellular metabolite concentrations measured by 1H-NMR
Submitter: Hanna Meyer
Assay type: Metabolomics
Technology type: NMR
Investigation: Multiomics study of Bacillus subtilis under osm...
Organisms: Bacillus subtilis
SOPs: NMR measurment and 1 hidden item
Data files: extracellular metabolites
Snapshots: No snapshots
intracellular metabolite measured by GC/MS and LC/MS
Submitter: Hanna Meyer
Assay type: Metabolomics
Technology type: NMR
Investigation: Multiomics study of Bacillus subtilis under osm...
Organisms: Bacillus subtilis
SOPs: 2 hidden items
Data files: intracellular metabolites GC/MS, intracellular metabolites LC/MS
Snapshots: No snapshots
SysMo2: Intra- and extracellular metabolome data of the chemostat experiments: nitrogen limitation, nitrogen limitation+ NaCl, nitrogen limitation + glucose
Creator: Hanna Meyer
Submitter: Hanna Meyer
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
intracellular metabolites measured by LC/MS
Creator: Hanna Meyer
Submitter: Hanna Meyer
Investigations: Multiomics study of Bacillus subtilis under osm...
Studies: B. subtilis_SysMo2_Chemostat_growthrate-salt
Assays: intracellular metabolites
extracellular metabolites concentrations [mM] measured by 1H-NMR i
Creator: Hanna Meyer
Submitter: Hanna Meyer
Investigations: Multiomics study of Bacillus subtilis under osm...
Studies: B. subtilis_SysMo2_Chemostat_growthrate-salt
Assays: extracellular metabolites
intracellular metabolite measured by GC/MS
Creator: Hanna Meyer
Submitter: Hanna Meyer
Investigations: Multiomics study of Bacillus subtilis under osm...
Studies: B. subtilis_SysMo2_Chemostat_growthrate-salt
Assays: intracellular metabolites
SOP for extracellular metabolite measurment
Creator: Hanna Meyer
Submitter: Hanna Meyer
Investigations: Multiomics study of Bacillus subtilis under osm...
Studies: B. subtilis_SysMo2_Chemostat_growthrate-salt
Assays: extracellular metabolites
Abstract (Expand)
Authors: F. Bonanini, D. Kurek, S. Previdi, A. Nicolas, D. Hendriks, S. de Ruiter, M. Meyer, M. Clapes Cabrer, R. Dinkelberg, S. B. Garcia, B. Kramer, T. Olivier, H. Hu, C. Lopez-Iglesias, F. Schavemaker, E. Walinga, D. Dutta, K. Queiroz, K. Domansky, B. Ronden, J. Joore, H. L. Lanz, P. J. Peters, S. J. Trietsch, H. Clevers, P. Vulto
Date Published: 16th Jun 2022
Publication Type: Journal
PubMed ID: 35704148
Citation: Angiogenesis. 2022 Nov;25(4):455-470. doi: 10.1007/s10456-022-09842-9. Epub 2022 Jun 15.