Eduard Kerkhoven
SEEK ID: https://fairdomhub.org/people/388
Locations:
United Kingdom
, 
Sweden
ORCID:
https://orcid.org/0000-0002-3593-5792
Joined: 8th Mar 2011
Roles
Project administrator
Their tagsRelated items
The main objective of the ERANET proposal Systems Biology Applications - ERASysAPP (app = application = translational systems biology) is to promote multidimensional and complementary European systems biology projects, programmes and research initiatives on a number of selected research topics. Inter alia, ERASysAPP will initiate, execute and monitor a number of joint transnational calls on systems biology research projects with a particular focus on applications - or in other words so called ...
Projects: SysVirDrug, SysMilk, SysMetEx, MetApp, IMOMESIC, WineSys, CropClock, SYSTERACT, XyloCut, RootBook, ROBUSTYEAST, LEANPROT, ErasysApp Funders
Web page: https://www.cobiotech.eu/about-cobiotech/erasysapp
Projects: SynBio4Flav
Web page: http://www.cnb.csic.es/index.php/en/research/research-departments/systems-biology
SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB, SysMO Funders, SilicoTryp, Noisy-Strep
Web page: http://sysmo.net/
The main objective of SynBio4Flav is to go further in the standardization of high complexity synthetic biological parts, and to demonstrate the development of a standardized, and systematic platform for flavonoids production based on synthetic microbial consortia (SMCs).
Programme: Systems Biology Programme
Public web page: Not specified
There is an urgent need for novel antibiotics to fight life-threatening infections and to counteract the increasing problem of propagating antibiotic resistance. Recently, new molecular genetic and biochemical tools have provided insight into the enormous unexploited genetic pool of environmental microbial biodiversity for new antibiotic compounds. New tools for more efficiently lifting this hidden treasure are needed to strengthen competitiveness of European industry, as well as for a cost-saving ...
Programme: ERASysAPP
Public web page: https://www.erasysapp.eu/calls/2nd-call/systeract
The SilicoTryp project aims at the creation of a “Silicon Trypanosome”, a comprehensive, experiment-based, multi-scale mathematical model of trypanosome physiology. Trypanosomes are blood-stream parasites transmitted by tsetse flies; they cause African sleeping sickness in humans and livestock. Currently available drugs have severe side effects, and the parasites are rapidly developing resistance. In this project, we collect a wide range of new experimental data on the parasite in its various ...
Programme: SysMO
Public web page: http://silicotryp.ibls.gla.ac.uk/wiki/Main_Page
Arginine kinase has been thought of as a potential stress marker (see 'Metabolic changes by oxidative stress in T. b. brucei 427'), the gene knockout cells have been constructed.
Creators: Dong-Hyun Kim, Eduard Kerkhoven
Submitter: Dong-Hyun Kim
The consensus GEM for Saccharomyces cerevisiae, version 8.3.3, maintained on https://github.com/SysBioChalmers/yeast-GEM.
Creator: Eduard Kerkhoven
Submitter: Eduard Kerkhoven
Model type: Metabolic network
Model format: SBML
Environment: Matlab
Download
Fixed parameter model, where the glycolysis model of bloodstream form T. brucei is extended with the pentose phosphate pathway and a ribokinase in the glycosome. Non-final version.
Creators: Eduard Kerkhoven, Fiona Achcar
Submitter: Eduard Kerkhoven
Model type: Ordinary differential equations (ODE)
Model format: SBML
Environment: Copasi
Fixed parameter model, where the glycolysis model of bloodstream form T. brucei is extended with the pentose phosphate pathway and an ATP:ADP antiporter over the glycosomal membrane. Non-final version.
Creators: Eduard Kerkhoven, Fiona Achcar
Submitter: Eduard Kerkhoven
Model type: Ordinary differential equations (ODE)
Model format: SBML
Environment: JWS Online
SBML file supplementary material of the publication.
Creators: Fiona Achcar, Barbara Bakker, Mike Barrett, Rainer Breitling, Eduard Kerkhoven
Submitter: Fiona Achcar
Model type: Ordinary differential equations (ODE)
Model format: SBML
Environment: Not specified
Abstract (Expand)
Authors: Snorre Sulheim, Tjaša Kumelj, Dino van Dissel, Ali Salehzadeh-Yazdi, Chao Du, Gilles P. van Wezel, Kay Nieselt, Eivind Almaas, Alexander Wentzel, Eduard J Kerkhoven
Date Published: 8th Oct 2019
Publication Type: Unpublished
Abstract (Expand)
Authors: , , , , , , T. Papamarkou, , , , , , , ,
Date Published: 7th May 2014
Publication Type: Not specified
Abstract (Expand)
Authors: , , V. P. Alibu, R. J. Burchmore, I. H. Gilbert, M. Trybilo, N. N. Driessen, D. Gilbert, , ,
Date Published: 5th Dec 2013
Publication Type: Not specified
Oral presentation given at ICSB 2011 in Mannheim/Heidelberg
Creator: Eduard Kerkhoven
Submitter: Eduard Kerkhoven
