Projects: pISAtree, HYp  Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato, INDIE  Biotechnological production of sustainable indole, _p_stRT
Institutions: National Institute of Biology
https://orcid.org/0000000216696482Roles: PhD Student
Expertise: Data analysis, Data analysisMathematical modellingBioinformaticsSystems biology, Data integration, Data Management, Visualization, Statistics, Programming, computational biology, Bioinformatics, Molecular Biology, Mathematical and statistical modeling
Tools: Computational Systems Biology, Databases, Python, Bioinformatics, Data integration, Dynamic modelling, R, Computational and theoretical biology, Data Management, Molecular Biology, Systems Biology
Computational Biologist, Young Researcher at Department of Biotechnology and Systems Biology, National Institute of Biology NIB and PhD candidate in Statistics, Ljubljana, Slovenia
Projects: HUMET Startup
Institutions: Centro de Investigación Príncipe Felipe
https://orcid.org/000000033318120XExpertise: Bioinformatics, Mathematical modelling, Transcriptomics, Data Management, Genomics, Systems Biology, Data integration, Genetics, Microarray analysis
Tools: Bioinformatics, Data Management, Genetics, Systems Biology, Computational and theoretical biology, Databases, Genomics, Transcriptomics, Computational Systems Biology, Dynamic modelling, R, Java
My scientific interests revolve around functional genomics, systems biology and the development of algorithms and software for the analysis of highthroughput data (mainly, but not restricted to, Next Generation Sequencing) and its application to the relationship between genotype and phenotype, mainly oriented to personalized and precision medicine. I am especially interested in the study of disease mechanisms and drug action mechanisms, drug repositioning and the definition of mechanismbased
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Projects: ICYSB 2015  International Practical Course in Systems Biology
Institutions: Institute of Cytology and Genetics
I am a biomodeler, PhD student. Actually, I've graduated from Novosibirsk State University on two specialities: my bachelor diploma is done in computer science and the master thesis is defended in information biology. So, I'm kind of drifting towards biology. I am a part of the Haploid Evolutionary Constructor project. Our research group studies are dedicated to the simulation of prokaryotic communities. Personally, I am involved into the simulation of spatially distributed bacterial communities
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Projects: COSMIC
Institutions: University of Nottingham
Roles: Postdoc
Expertise: Mathematical modelling
Tools: Partial differential equations, ODE, Computational and theoretical biology
Projects: TRANSLUCENT
Institutions: University of Applied Sciences Koblenz, Rhein Ahr Campus
Expertise: Ma
Tools: Machine Learning, Thermodynamics, Biophysics, R, Matlab, Computational and theoretical biology
I am working in the mathematical modeling of potassium homeostasis. In addition, we are developing tools and methods for the statistical analysis of biological data.
Projects: SysMOLAB
Institutions: Heidelberg Institute for Theoretical Studies (HITS gGmbH)
Projects: BaCellSysMO
Institutions: University of Rostock
Expertise: Systems Biology, sensitivity analysis, stress responses, Deterministic modelling of gene regulation networks, dynamics and control of biological networks, parameter estimation, Bacillus subtilis, Mathematical modelling
Tools: Dynamic modelling, Deterministic models, Stochastic models, linux, Matlab, ODE, Computational and theoretical biology, Biochemistry
Modelling of the general stress response activation cascade of sigB in B. subtilis in response to starvation.
Projects: BaCellSysMO
Institutions: University of Goettingen
Expertise: Mathematical modelling
Tools: SubtiWiki, Python, Computational and theoretical biology, Bioinformatics
I'm a PhD student at the lab of Prof. Dr. Jörg Stülke.
My main interest is to analyze the central metabolism of Bacillus subtilis using systems biology software.
I have developed an algorithm to find short pathways connecting sets of metabolites and I'm also involved in SubtiWiki, the wiki for all genes of Bacillus subtilis (http://subtiwiki.unigoettingen.de)
Projects: SysMOLAB
Institutions: Wageningen University & Research
Expertise: Reactor models, dynamics of biological networks., Mathematical modelling, Bioinformatics
Tools: Material balance based modeling, SQL, Mathematica, Matlab, Copasi, JWS Online, Algebraic equations, Linear equations, Partial differential equations, ODE, SBML, Model organisms, Metabolomics, Cell biology, Computational and theoretical biology, Molecular Biology
I'm a modeller, specialized in kinetic modeling of biochemical networks. My focus in the SysMOLAB consortium is on creating models of Lactococcus lactis glycolysis and couple this to other related lactic acid bacteria like Streptococcus pyogenes and Enterococcus faecalis. Besides kinetic modeling, I'm also interested in combining various modeling techniques (genomescale modeling, qualitative modeling).
Projects: KOSMOBAC
Institutions: University of Aberdeen
Physicist, working on the modelling side.
Projects: COSMIC, BaCellSysMO, SYSTERACT, HUMET Startup, INCOME, BESTER, iRhythmics
Institutions: University of Rostock
Expertise: Data analysis Mathematical modelling Bioinformatics Systems biology, dynamics of biological networks, dynamics and control of biological networks
Tools: quantitative western blot analysis, Stochastic models, quantitative western blot analyses, differential algebraic equations, stimulus response experiments, Mathematica, Matlab, ODE, Computational and theoretical biology
Expertise: Mathematical modelling of biosystems and bioprocesses, Statistically and biologically inspired optimization algorithms, dynamics and control of biological networks, parameter estimation, Mathematical modelling
Tools: including:  Dynamic modelling  Parameter estimation  Optimal experimental design  Dynamic optimization, Computational Systems Biology, Mathematica, Matlab, Partial differential equations, ODE, Computational and theoretical biology
We are very interested in applying a systems approach (i.e. modelbased concepts and related computational tools) to problems from the biological domain. In particular, we are doing research in computational systems biology, targetting the following topics:
 Parameter estimation (inverse problems, model calibration) in biochemical pathways
 Optimal experimental design (optimal dynamic experiments) for Systems Biology
 Dynamic optimization (optimal control) of biosystems and bioprocesses

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Projects: KOSMOBAC
Institutions: University of Aberdeen
Expertise: Programming, Physics, Mathematical modelling
Tools: PDE, C programing, Stochastic models, linux, ODE, Computational and theoretical biology
Projects: TRANSLUCENT
Institutions: University of Applied Sciences Koblenz, Rhein Ahr Campus
Grammar school until 1998
199899 Alternative civilian service
19992002 Professional education as male nurse
20022007 Study of Biomathematics
2007... PhD student in TRANSLUCENT project
Projects: MOSES
Institutions: Medical University Vienna
Expertise: Bioinformatics
Tools: PHP, SQL, R, Microarray analysis, Perl, Transcriptomics, Computational and theoretical biology, Data Management
General Bioinformatics
Projects: COSMIC
Institutions: University of Nottingham
I am a Birmingham and MRC Fellow in mathematical biology. Specialising in the modelling of gene regulation networks using both numerical and analytical approaches, my work spans a range of biological applications, from drug development to bioenergy to understanding bacterial behaviour. My MRC fellowship gave me the opportunity to gain experimental training in order to generate the complementary data required to adopt a truly interdisciplinary approach to mathematical modelling in biology.
I worked
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Projects: COSMIC
Institutions: University of Rostock
biomathematician, PhD student at the University of Rostock, Systems Biology Group Rostock
Projects: KOSMOBAC
Institutions: University of Aberdeen
My background is physics engineering & biomedical engineering. I did my PhD in Surrey on the modelling of response of mammalian cells to radiation of different qualities.
I have been working at the University of Aberdeen since November 2007 as a theoreticien research fellow of the KOSMOBAC project. We are investigating the homeostasis of ions in bacteria E. coli. I have been working at a model of the buffering capacity of the cytopplasm, arising from the presence of weak acids and bases. We
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Institutions: University of Tuebingen, University of Tübingen
Projects: BaCellSysMO
Institutions: University of Stuttgart
Expertise: Signalling networks, metabolic networks, carbon metabolism, Nonlinear Dynamics, Systems Biology, stress responses, Mathematical modelling of biosystems and bioprocesses, Bacillus subtilis, Mathematical modelling, Biochemistry, Microbiology
Tools: fedbatch cultivation, Dynamic modelling, Deterministic models, Computational Systems Biology, continuous cultivation, Enzyme assay, Chromatography, Fermentation, Mathematica, Matlab, ODE, Computational and theoretical biology
I am a biologist in the lab of Prof. Reuss at the University of Stuttgart and I am working in the field of biotechnology and mathematical modelling.
Expertise: Mathematical and statistical modeling, bioreactor models, dynamics of biological networks, dynamics and control of biological networks, parameter estimation, Reactor models, Mathematical modelling, Bioinformatics, Molecular Biology
Tools: continuous cultivation, evaluation of process dynamics, DIVA, differential algebraic equations, linux, Material balance based modeling, stimulus response experiments, Microarray analysis, Matlab, Linear equations, ODE, Single Cell analysis, SBML, Model organisms, Transcriptomics, Computational and theoretical biology, Bioinformatics
I'm an engineer at the MPI Magdeburg and I'm working in the field of mathematical modeling, model verification, parameter identification, model analysis and experimental design. I'm involved in two projects, KOsmoBac and PSYSMO.
Projects: COSMIC, BaCellSysMO
Institutions: University of Rostock
Roles: Postdoc
Expertise: Statistical Physics, Data analysis, Systems Biology, bistability, Physics, dynamics of biological networks, dynamics and control of biological networks, Mathematical modelling
Tools: data modelling, Dynamic modelling, Computational Systems Biology, C programming, Stochastic models, differential algebraic equations, Mathematica, Matlab, ODE, Computational and theoretical biology
Modelling of cellular signalling, Dynamic Motifs and Feedback, Quantitative Measures, Theoretical Aspects of Modelling Biological Systems
Projects: PSYSMO
Institutions: Max Planck Institute for Dynamics of Complex Technical Systems
Projects: KOSMOBAC
Institutions: University of Aberdeen
Expertise: Mathematical modelling of biosystems and bioprocesses, Mathematical modelling
Tools: Deterministic models, including: Dynamic modelling Parameter estimation Optimal experimental design Dynamic optimization, Computational Systems Biology, Stochastic models, C programming, enzymatic analyses, data modeling, linux, ODE, Computational and theoretical biology