COMBINE Multicellular Modelling

No description specified

Programme: COMBINE (Computational Modeling in Biology Network)

SEEK ID: https://fairdomhub.org/projects/90

Public web page: Not specified

Organisms: No Organisms specified

FAIRDOM PALs: No PALs for this Project

Related items

Vasundra Toure

Projects: Kinetics on the move - Workshop 2016, CausalDB, COMBINE Multicellular Modelling, Colosys, NTNU Health Druglogics

Institutions: Kinetics on the move Workshop at HITS, Norwegian University of Science and Technology

orcid.org/0000-0003-4639-4431

Disciplines: Bioinformatician

Roles: Not specified

Expertise: Bioinformatics, Systems Biology, SBGN standard

Tools: Java, SBGN-ED, Neo4J

No description specified

Matthias König

Projects: Kinetics on the move - Workshop 2016, Multi-Scale Models for Personalized Liver Function Tests (LiSyM-MM-PLF), FAIRDOM user meeting, COMBINE Multicellular Modelling, FAIRDOM & LiSyM & de.NBI Data Structuring Training

Institutions: Charité University Medicine Berlin, Humboldt-Universität zu Berlin, Humboldt University Berlin

orcid.org/0000-0003-1725-179X

Disciplines: Modeller, Bioinformatician

Roles: Project Coordinator

Expertise: metabolic networks, Kinetic modelling, Liver, Metabolic Models, Computational modelling, computational biology

Tools: jupyter notebooks, SBML, SED-ML, ODE, roadrunner, tellurium, Cytoscape

We are investigating liver metabolism and function with the help of computational models and methods.
Read more about the LiSyM junior group at: www.livermetabolism.com

Junior Group Leader
Dr. Matthias König

Institute for Theoretical Biology
Humboldt-University Berlin
Invalidenstraße 43, 10117 Berlin, Germany
phone +49 30 2093-8450
konigmatt@googlemail.com

The liver is the central metabolic organ of our body playing a crucial role in the clearance of drugs, xenobiotics and numerous metabolites
...

Jürgen Pahle

Projects: COMBINE Multicellular Modelling

Institutions: University of Heidelberg

orcid.org/0000-0002-7637-7547

Disciplines: Not specified

Roles: Not specified

Expertise: Not specified

Tools: Not specified

No description specified

Randy Heiland

Projects: COMBINE Multicellular Modelling

Institutions: Indiana University Bloomington

orcid.org/0000-0002-7440-2905

Disciplines: Modeller

Roles: Not specified

Expertise: Mathematical modelling, Data Management, Software Engineering, Python, standards, c++

Tools: Computational Systems Biology, Data Management

Research Associate in the Macklin Lab, School of Informatics, Computing, and Engineering. Indiana University, Bloomington, IN USA.

James Sluka

Projects: COMBINE Multicellular Modelling

Institutions: Indiana University Bloomington

orcid.org/0000-0002-5901-1404

Disciplines: Modeller, Experimentalist, Bioinformatician

Roles: Not specified

Expertise: Chemistry, Agent-based modelling, ODE modelling of biological interaction network, standards, text mining, Biochemistry, computational chemistry

Tools: Compucell3D, SBML, Pharmacology and toxicology, pbpk

I am a multicell and multiscale modeler and member of the Biocomplexity group at Indiana University. The group produces and maintains the multicellular modelling package Compucell3D. I am also a voting member of the USA committee to the International Organization for Standards (ISO) working group on standards in biotechnology and the chairman of a sub-sub group on publishing standards.

Padraig Gleeson