Indiana University Bloomington
Related items
Projects: COMBINE Multicellular Modelling
Institutions: Indiana University Bloomington
Projects: COMBINE Multicellular Modelling
Institutions: Indiana University Bloomington
https://orcid.org/0000-0001-8003-6860
Research Scientist, Computer Vision; Intellisense Systems, Inc. Lead Developer for MultiCellDS
Projects: COMBINE Multicellular Modelling
Institutions: Indiana University Bloomington
https://orcid.org/0000-0002-7440-2905
Research Associate in the Macklin Lab, School of Informatics, Computing, and Engineering. Indiana University, Bloomington, IN USA.
Projects: _p_stRT
Institutions: Indiana University Bloomington
Projects: COMBINE Multicellular Modelling
Institutions: Indiana University Bloomington
https://orcid.org/0000-0002-5901-1404
I am a multicell and multiscale modeler and member of the Biocomplexity group at Indiana University. The group produces and maintains the multicellular modelling package Compucell3D. I am also a voting member of the USA committee to the International Organization for Standards (ISO) working group on standards in biotechnology and the chairman of a sub-sub group on publishing standards.
Projects: COMBINE Multicellular Modelling
Institutions: Indiana University Bloomington
This is the exchange platform of the COMBINE network.
COMBINE is an initiative to coordinate the development of various community standards and formats for computational models: BioPax, CellML, NeuroML, Synthetic Biology Open Language (SBOL), Systems Biology Graphical Notation (SBGN), Systems Biology Markup Language (SBML), Simulation Experiment Description Markup Language (SED-ML).
Projects: COMBINE Multicellular Modelling, ModeleXchange initiative
Web page: http://co.mbine.org
National Institute of Biology, Department of Biotechnology and Systems Biology projects
Projects: HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato, pISA-tree, MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection, SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture, INDIE - Biotechnological production of sustainable indole, _p_stRT, ADAPT - Accelerated Development of multiple-stress tolerAnt PoTato, _p_RNAinVAL
Web page: http://www.nib.si/eng/index.php/departments/department-of-biotechnology-and-systems-biology
Programme: COMBINE (Computational Modeling in Biology Network)
Public web page: https://multicellml.org/
project: pstRT Short Name: stRT Title: Solanum tuberosum Reference Transcriptomes Description: Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato pISA projects path: ../pISA-Projects Local pISA-tree organisation: National Institute of Biology pISA project creation date: 2019-10-22 pISA project creator: Maja Zagorscak, Ziva Ramsak, Marko Petek Project funding code: This project was supported by the Slovenian Research Agency (grants P4-0165, J4-4165, J4-7636, ...
Programme: NIBSys
Public web page: http://www.nib.si/eng/index.php/systems-biology
Start date: 1st Dec 2017
End date: 1st Jan 2020
