Projects: Environmentally-friendly bioadhesives from renewable resources (WooBAdh)
Institutions: Universidade de Santiago de Compostela
https://orcid.org/0000-0002-7323-5439Expertise: Biochemistry, Biotechnology, Fermentation, Biorefinery
Dr. Noelia Pérez-Rodríguez holds a PhD in Agro-Food Science and Technology and has over 6 years of expertise in the areas of Biomass Conversion and Bioprocess Technology with focus on the development of biorefinery strategies for total and sustainable conversion of biomass (lignocellulosic materials) into biobased products. Dr. Pérez-Rodríguez’s research interests include: i) biomass pretreatment and hydrolysis using chemical, physico-chemical or biological methods; ii) biomass conversion by ...
Thelmo A. Lu-Chau is chemical engineer by the Universidad Nacional de Trujillo (Perú) and PhD in Chemical Engineering by the Universidade de Santiago de Compostela (USC, Spain). He is currently working as Associate Professor at the Dept. Chemical Engineering at the Faculty of Sciences (Lugo) of the USC. His research areas include the production of biofuels (ethanol, butanol) and biopolymers (PHA) from lignocellulosic biomass and cereals, the production of enzymes (glucanases and ligninolytic ...
Projects: Rhodolive, Establishing an innovative and transnational feed production approach for reduced climate impact of the aquaculture sector and future food supply, Establishing an innovative and transnational feed production approach for reduced climate impact of the aquaculture sector and future food supply
Institutions: Leuphana University of Lüneburg, Institut for Food and Environmental Research (ILU), Institute for Food and Environmental Research (ILU)
Expertise: Biotechnology, Fermentation, Alga, Organic residues
Tools: Bioreactor experiments/Fermentation (batch, analytics
Projects: EmPowerPutida
Institutions: Wageningen University & Research
Projects: INBioPharm
Institutions: Norwegian University of Science and Technology
Projects: WURSynBio
Institutions: Wageningen University & Research
Expertise: Fermentation, Analytical chemistry
Tools: Fermentation, HPLC, Biochemistry, Matlab
Projects: SYSTERACT
Institutions: University of Tübingen
Projects: SYSTERACT
Institutions: University of Tübingen
Expertise: Microbiology, Molecular Biology, Genetics, Transcriptomics, Metabolic Engineering, nitrogen metabolism, Streptomyces coelicolor, Actinobacteria, antibiotic production
Tools: Fermentation, Genetic modification, Molecular biology techniques (RNA/DNA/Protein), Proteomics, Transcriptomics, Biochemistry and protein analysis
Projects: LEANPROT
Institutions: Competence Center of Food and Fermentation Technologies
Expertise: Proteomics, Fermentation, Escherichia coli
Tools: continuous cultivation, Maxquant, SILAC, Proteomics
Expertise: Microbiology, genetic engineering, Fermentation, Cell biology, Metabolic Engineering
Research Scientist in the Biotechnology and Nanomedicine department at the non-profit research institution, SINTEF, in Norway.
Projects: SysMO-LAB
Institutions: University of Amsterdam
Expertise: carbon metabolism, Biochemistry, Fermentation, Glycolysis, Microbiology
Tools: Chromatography, Fermentation, Biochemistry and protein analysis
Projects: SysMO-LAB
Institutions: Norwegian University of Life Sciences
Projects: PSYSMO, MOSES, COSMIC, BaCell-SysMO
Institutions: University of Stuttgart
Expertise: Reactor models, rapid sampling experiments, Systems Biology, Mathematical modeling, Regulatory Networks, Dynamics and Control of Biological Networks
Tools: Fermentation, stimulus response experiments, evaluation of process dynamics, continuous cultivation, Computational Systems Biology, including:- Dynamic modelling- Parameter estimation- Optimal experimental design- Dynamic optimization, Dynamic modelling, In silico Metabolic Network Analysis, fed-batch cultivation
Professor for Biochemcial Engineering, University Stuttgart
Projects: MOSES
Institutions: VU University Amsterdam
Projects: MOSES, ExtremoPharm, ZucAt, GenoSysFat, DigiSal, EraCoBiotech 2 nd call proposal preparation, FAIRDOM & LiSyM & de.NBI Data Structuring Training
Institutions: University of Stuttgart, University of Hohenheim, Norwegian University of Life Sciences, Norwegian University of Science and Technology
https://orcid.org/0000-0002-7973-9902Expertise: Biochemistry, coupling metabolome and environome, rapid sampling experiments, Systems Biology, carbon metabolism, Stoichiometric modelling, Proteomics, Metabolomics, yeast, fungi, Dynamics and Control of Biological Networks
Tools: Biochemistry and protein analysis, Metabolomics, Matlab, Fermentation, Chromatography, Material balance based modeling, stimulus response experiments, continuous cultivation, Enzyme assay, Mass spectrometry (LC-MS/MS), HPLC, GC and LC/MS analysis of metabolites, ODE, Parameter estimation
I've become a SysMO DB PAL for MOSES project in 2007 being a post-doc in lab of Prof. Matthias Reuss at University of Stuttgart. In the MOSES project, our major efforts were in the experimental data acquisition for dynamic model of primary carbon and anaerobic energy metabolism in yeast. The model implements prediction of perturbations of two types: glucose pulse and temperature jump. We implement “stimulus-response” methodology for the unraveling the dynamic structure of the network and to ...
Projects: COSMIC
Institutions: Wageningen University & Research
Expertise: Microbiology, Molecular Biology
Tools: Biochemistry and protein analysis, Genomics, Transcriptomics, Metabolomics, Fermentation
I am assistant professor at the Laboratory of Microbiology and my interest is in the area of molecular microbiology. Research focuses on the analysis of the metabolism of anaerobic fermentative bacteria and archaea, especially with respect to biofuel production (hydrogen, butanol). Within SysMo our tasks concern the effect of butanol stress, using metabolomics and transcriptomics.
Projects: KOSMOBAC
Institutions: Max-Planck-Institute of Biochemistry Martinsried
Expertise: Microbiology, Biochemistry, Molecular Biology, Bioinformatics, Mathematical modelling, sequencing
Tools: Microbiology, Molecular Biology, Bioinformatics, Biochemistry and protein analysis, Matlab, Fermentation, rtPCR, molecular biological techniques (RNA/DNA techniques, qPCR, Transcriptomics
Professor in Jinan University, Guangzhou, China. My research interest is in the modeling of translation. Connecting various processes in translation, we can investigate the impact of different factors on protein biosynthesis and biogenesis in genome-wide scale. This may reveal various general mechanisms on control level of gene expression and folding efficiency regulation in different growth conditions.
Projects: COSMIC
Institutions: University of Ulm
Postdoc University of Ulm/Dept. Microbiology and Biotechnology
Projects: COSMIC
Institutions: Beuth University of Applied Sciences Berlin
https://orcid.org/0000-0001-6096-1354Expertise: Mathematical modelling, Data Management, coupling metabolome and environome, rapid sampling experiments, dynamics of biological networks, bioreactor models, Optimal experimental design, Dynamic optimization., Nonlinear Dynamics, Data Integration, Parameter estimation
Tools: SBML, Matlab, Fermentation, Material balance based modeling, stimulus response experiments, evaluation of process dynamics, continuous cultivation, Dynamic modelling
Process engineer, modeling biological systems since 1985.
Projects: BaCell-SysMO
Institutions: University of Braunschweig
University Education: 1987-1993, Biotechnology (Diploma), Technische Universität Braunschweig, Germany.
Dissertation: 1993-1996, Disseration German Research Centre for Biotechnology, Biochemical Engineering Division, Braunschweig, Germany.
Habiliation: 2006, Saarland University, Saarbrücken, Germany.
Positions 1993-1996: Research Assistant, German Research Centre for Biotechnology, Biochemical Engineering Division, Braunschweig, Germany. 1997-1998: Post-doc at Department of Applied Chemistry & ...
Projects: BaCell-SysMO
Institutions: University of Stuttgart
Expertise: Microbiology, Biochemistry, Mathematical modelling, Bacillus subtilis, Mathematical modelling of biosystems and bioprocesses, stress responses, Systems Biology, Nonlinear Dynamics, carbon metabolism, Signalling networks, Metabolic Networks
Tools: Computational and theoretical biology, ODE, Matlab, Mathematica, Fermentation, Chromatography, continuous cultivation, Enzyme assay, Computational Systems Biology, Deterministic models, Dynamic modelling, fed-batch cultivation
I am a biologist in the lab of Prof. Reuss at the University of Stuttgart and I am working in the field of biotechnology and mathematical modelling.
Projects: KOSMOBAC
Institutions: Ludwig-Maximilians University of Munich
Expertise: Microbiology, Biochemistry, Genetics, Molecular Biology
Tools: Genetics, Biochemistry and protein analysis, Fermentation, Chromatography, Membrane protein biochemistry, molecular biological techniques (RNA/DNA techniques), spectroscopy, site-directed and random mutagenesis, plasmon resonance spectroscopy, reporter gene analyses
I am a PhD student of the microbiology department at the Ludwig-Maximilians Universität München. I work at the chair of Prof. Kirsten Jung. The topic of our workpackage deals with "K+ homeostasis in Escherichia coli". In special I'm working on the sensor kinase KdpD that controls together with the response regulator KdpE the expression of the high-affinity K+ uptake system KdpFABC. The yet not fully understood molecular mechanism of stimulus perception and signal transduction is of particular ...
Projects: SulfoSys
Institutions: Wageningen University & Research
Expertise: Microbiology, Genetics
Projects: COSMIC
Institutions: University of Ulm
Expertise: Microbiology, Molecular Biology, Regulatory Networks
Tools: Fermentation, DNA, RNA, Proteins, Gaschromatography, Creation of Mutants
Dr. Bettina Schiel-Bengelsdorf Senior Scientist Department of Microbiology and Biotechnology University of Ulm 89069 Ulm, Germany
Projects: COSMIC
Institutions: University of Goettingen
Expertise: Microbiology, Molecular Biology, Programming, Anaerobic Microbiology, Chemostats, HPLC, Clostridium, Microarray printing, Microarray experiments with prokaryotes, Database design
Tools: Microbiology, Java, Fermentation, Microarray analysis, Molecular biology techniques (RNA/DNA/Protein), qRT-PCR, HPLC, Groovy
I have a permanent position at the department of microbiology at the TU-München. As a microbiologist I am interested in the regulation of central metabolism in prokaryotic organisms with different types of energy metabolism such as Clostridia, Bacilli and acetic acid bacteria. Furthermore I worked as a software developer for several years in a bioinformatics company and I am very interested in bioinformatics and handling of large amounts of data.
Projects: COSMIC
Institutions: University of Ulm
Expertise: Microbiology, Molecular Biology, Biotechnology
Tools: Fermentation, DNA, Gaschromatographic analysis, Protein, Mutant construction
Phd student University of Ulm Institute of Microbiology and Biotechnology Albert-Einstein- Allee 11 89069 Ulm, Germany
Projects: COSMIC
Institutions: University of Rostock
Expertise: Microbiology, Biotechnology
Tools: Transcriptomics, Fermentation, Proteomics (2D-PAGE), Gaschromatographic analysis
PhD University of Rostock, Germany Institute of Biological Sciences Division of Microbiology Albert-Einstein-Str. 3 18051 Rostock
Projects: SCaRAB, STREAM, SYSTERACT, INBioPharm
Institutions: SINTEF, Norwegian University of Science and Technology
Expertise: Bioinformatics, Microarray analysis, Data analysis, Pseudomonas, Streptomyces, Stoichiometric modelling, Prokaryotic genetics, Analytical chemistry
Tools: Transcriptomics, Perl, Fermentation, GC and LC analysis of metabolites, Pathway Tools, MS imaging, Mass spectrometry (LC-MS/MS), Mass spectrometry, FT-ICR-MS, Field Flow Fractionation
Senior Research Scientist at SINTEF, Dept. of Biotechnology and Nanomedicine, Research Group Mass Spectrometry
Projects: SUMO
Institutions: Max Planck Institute for Dynamics of Complex Technical Systems
Projects: PSYSMO, DigiSal, GenoSysFat, HUMET Startup, EmPowerPutida, MycoSynVac - Engineering Mycoplasma pneumoniae as a broad-spectrum animal vaccine, SAFE-Aqua, INDIE - Biotechnological production of sustainable indole
Institutions: Helmholtz Centre for Infection Research Braunschweig, Wageningen University & Research
Expertise: Microbiology, Mathematical modelling of biosystems and bioprocesses, Optimal experimental design, Systems Biology, Biotechnology
Tools: Bioinformatics, Genetic modification, Proteomics, Fermentation, Microarray analysis, Computational Systems Biology, Metabolic Engineering, microbiology techniques, reverse engineering, computational platform development, metabolic netwlrk visualization
My research activities has been to use mathematical models and Computational Biology to answer biological questions, intertwining in silico and experimental methods at all stages. I have a strong interest in exploring the interfaces between Fundamental Biology and bona fide Engineering, specifically in the realm of environmental and industrial problems. The research goals of my group are to contribute to the elucidation of mechanisms underlying basic cellular processes, evolution and ecological ...
Projects: SulfoSys
Institutions: Wageningen University & Research
Expertise: Microbiology, Biochemistry, Molecular Biology
Tools: Biochemistry and protein analysis, Fermentation, Microarray analysis
I obtained my PhD in 1989 at the Free University (Amsterdam) on a research project in which microbial physiology, biochemistry, and molecular biology were combined. Subsequently I spent 3 years abroad, 2.5 years of which as EMBO fellow at the EMBL (Heidelberg, Germany) where I worked on protein engineering and protein crystallization. I returned to Amsterdam as KNAW fellow for 3 years, during which I worked on protein analysis and pathway engineering. In 1995 I was appointed as group leader ...
Institutions: University of Amsterdam
Expertise: Microbiology, Biochemistry, Molecular Biology, Escherichia coli, HPLC
Tools: Biochemistry, Molecular Biology, Fermentation, Chromatography
Martijn Bekker (1979) was born in Amstelveen (The Netherlands). He started his studies in biology in 1997 at the University of Amsterdam, and graduated in 2003 with specializations in molecular microbiology and in immunology. The internships during his undergraduate studies were carried out in the labs of Prof. dr. B. Oudega (VU, Amsterdam, The Netherlands) and Prof. dr. F. Heffron (OHSU, Portland, Oregon, USA). He continued with his graduate studies in 2003 in the Laboratory for Molecular Microbial ...
Fit-for-purpose cascaded-approach for water and resource recovery from food industry wastewaterFood industry produces large amounts of wastewater with significant contents of organic carbon, nutrients and added-value compounds at low concentrations that can be recovered following a cascaded approach based on a specifically designed sequence of technologies. However, the diversity and seasonality of industrial wastewater streams, i.e. in terms of composition, concentration, temperature, etc. ...
Programme: Independent Projects
Public web page: Not specified
Organisms: Not specified
Abstract (Expand)
Authors: Eleanor W Trotter, , Andrea M Hounslow, C Jeremy Craven, Michael P Williamson, , ,
Date Published: 27th Sep 2011
Publication Type: Not specified
PubMed ID: 21980479
Citation: