SEEK ID: https://fairdomhub.org/people/413
Location: Netherlands
ORCID: Not specified
Joined: 13th Dec 2012
Expertise: carbon metabolism, Biochemistry, Fermentation, Glycolysis, Microbiology
Tools: Chromatography, Fermentation, Biochemistry and protein analysis
Related items
- Programmes (1)
- Projects (1)
- Institutions (1)
- Data files (4)
- Models (1)
- Publications (1)
- Presentations (1)
SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB, SysMO Funders, SilicoTryp, Noisy-Strep
Web page: http://sysmo.net/
Comparative Systems Biology: Lactic Acid Bacteria
Programme: SysMO
Public web page: http://www.sysmo.net/index.php?index=57
amino acid auxotrophies as determined for S. pyogenes, E. faecalis, L. lactis and L. plantarum (ATCC, NC8, JDM1 and WCFS1) subsequent inoculation (3x) in CDM
Creator: Koen van Grinsven
Submitter: Koen van Grinsven
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Vmaxes E. faecalis from chemostat cultures, D0.05, D0.15 en D0.4 triplicates for every growthrate, measured in in-vivo-like assay (Goel, Teusink, AEM, 2012) glycolytic enzymes + LDH + acetate/EtOH branch
Creator: Koen van Grinsven
Submitter: Koen van Grinsven
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
raw data OD600 of amino acid auxotrophy exps S. pyogenes
Creator: Koen van Grinsven
Submitter: Koen van Grinsven
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
raw data OD600
Creator: Koen van Grinsven
Submitter: Koen van Grinsven
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
A reconstruction of the cellular metabolism of the opportunistic human pathogen Enterococcus faecalis V583 represented as stoichiometric model and analysed using constraint-based modelling approaches
Creators: Nadine Veith, Margrete Solheim, Koen van Grinsven, Jennifer Levering, Jeroen Hugenholtz, Helge Holo, Ingolf Nes, Bas Teusink, Ursula Kummer, Brett G Olivier, Ruth Grosseholz
Submitter: Nadine Veith
Model type: Linear equations
Model format: SBML
Environment: Not specified
Organism: Enterococcus faecalis
Investigations: Investigation of glycolysis and pyruvate branch...
Abstract (Expand)
Authors: N. Veith, M. Solheim, K. W. van Grinsven, B. G. Olivier, J. Levering, R. Grosseholz, J. Hugenholtz, H. Holo, I. Nes, B. Teusink, U. Kummer
Date Published: 19th Dec 2014
Publication Type: Not specified
PubMed ID: 25527553
Citation: Appl Environ Microbiol. 2015 Mar 1;81(5):1622-33. doi: 10.1128/AEM.03279-14. Epub 2014 Dec 19.