Guido Sanguinetti
SEEK ID: https://fairdomhub.org/people/406
Location:
United Kingdom
ORCID: Not specified
Joined: 14th Jan 2013
Expertise: Machine Learning, Bioinformatics, Computational modelling
Tools: Bayesian inference
Their tagsRelated items
SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB, SysMO Funders, SilicoTryp, Noisy-Strep
Web page: http://sysmo.net/
"Systems Understanding of Microbial Oxygen responses" (SUMO) investigates how Escherichia coli senses oxygen, or the associated changes in oxidation/reduction balance, via the Fnr and ArcA proteins, how these systems interact with other regulatory systems, and how the redox response of an E. coli population is generated from the responses of single cells. There are five sub-projects to determine system properties and behaviour and three sub-projects to employ different and complementary modelling ...
Programme: SysMO
Public web page: http://www.sysmo.net/index.php?index=55
Code for joint probabilistic inference of transcription factor behaviour and gene-transcription factor as well as metabolite-transcription factor interaction based on genome and metabolite data.
Creators: Botond Cseke, Guido Sanguinetti
Submitter: Botond Cseke
Model type: Not specified
Model format: Matlab package
Environment: Matlab
DownloadBayesian model for inference of the activity of transcription factors from targets' mRNA levels. A standalone C sharp package (runs on linux and mac under MONO).
Creator: Guido Sanguinetti
Submitter: Guido Sanguinetti
Model type: Not specified
Model format: Not specified
Environment: Not specified
External Link
Abstract (Expand)
Authors: , , , , , , S. Kunz, , , , , ,
Date Published: 7th May 2014
Publication Type: Not specified
Abstract (Expand)
Authors: , Andrea Ocone, Melanie R Stapleton, Simon Hall, Eleanor W Trotter, , ,
Date Published: 8th Aug 2012
Publication Type: Not specified
Abstract (Expand)
Authors: Eleanor W Trotter, , Andrea M Hounslow, C Jeremy Craven, Michael P Williamson, , ,
Date Published: 27th Sep 2011
Publication Type: Not specified
Abstract (Expand)
Authors: H M Shahzad Asif, , , Neil D Lawrence, Magnus Rattray,
Date Published: 24th Aug 2010
Publication Type: Not specified
