TFInfer: a tool for probabilistic inference of transcription factor activities Version 1
External LinkBayesian model for inference of the activity of transcription factors from targets' mRNA levels. A standalone C sharp package (runs on linux and mac under MONO).
SEEK ID: https://fairdomhub.org/models/102?version=1
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Created: 14th Jan 2013 at 18:10
Last used: 4th Jul 2022 at 22:01
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Version 1 Created 14th Jan 2013 at 18:10 by Guido Sanguinetti
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Projects: SUMO
Institutions: University of Edinburgh
SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB, SysMO Funders, SilicoTryp, Noisy-Strep
Web page: http://sysmo.net/
"Systems Understanding of Microbial Oxygen responses" (SUMO) investigates how Escherichia coli senses oxygen, or the associated changes in oxidation/reduction balance, via the Fnr and ArcA proteins, how these systems interact with other regulatory systems, and how the redox response of an E. coli population is generated from the responses of single cells. There are five sub-projects to determine system properties and behaviour and three sub-projects to employ different and complementary modelling ...
Programme: SysMO
Public web page: http://www.sysmo.net/index.php?index=55
Abstract (Expand)
Authors: , Andrea Ocone, Melanie R Stapleton, Simon Hall, Eleanor W Trotter, , ,
Date Published: 8th Aug 2012
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Abstract (Expand)
Authors: , , , Eleanor W Trotter, H M Shahzad Asif, Guido Sanguinetti, , ,
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Date Published: 24th Aug 2010
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