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Projects: SysMO-LAB
Institutions: Manchester Centre for Integrative Systems Biology, University of Manchester
Projects: SysMO-LAB
Institutions: Norwegian University of Life Sciences
Institutions: University of Amsterdam
Martijn Bekker (1979) was born in Amstelveen (The Netherlands). He started his studies in biology in 1997 at the University of Amsterdam, and graduated in 2003 with specializations in molecular microbiology and in immunology. The internships during his undergraduate studies were carried out in the labs of Prof. dr. B. Oudega (VU, Amsterdam, The Netherlands) and Prof. dr. F. Heffron (OHSU, Portland, Oregon, USA). He continued with his graduate studies in 2003 in the Laboratory for Molecular Microbial ...
Projects: SysMO-LAB
Institutions: VU University Amsterdam
Projects: SysMO-LAB
Institutions: Heidelberg Institute for Theoretical Studies (HITS gGmbH)
- BSc in Physics and Chemistry at the West University Timisoara 1999 - graduated with a average grade of 9.57 (on a scale from 1.00 to 10.00)
- Accepted in the International MSc/PhD Program Molecular Biology - International Max Planck Research School, Goettingen, Germany in June 2000. For details about the program please consult http://www.gpmolbio.uni-goettingen.de/
- Master in Molecular Biology at the Georg-August Univ. Goettingen, Germany, August 2001 - graduated with a grade of 2.0 (on a scale ...
Projects: SysMO-LAB
Institutions: University of Heidelberg
I am working on the development of algorithms for Comparative Systems Biology.
Projects: COSMIC, SysMO-LAB, HUMET Startup
Institutions: Wageningen University & Research
Projects: SysMO-LAB
Institutions: Technical University of Denmark - Systems Biology
Projects: SysMO-LAB
Institutions: Heidelberg Institute for Theoretical Studies (HITS gGmbH), University of Heidelberg
Projects: SysMO-LAB
Institutions: University of Rostock
Postdoc @ Institute of Medical Microbiology, University of Rostock
Projects: SysMO-LAB
Institutions: Heidelberg Institute for Theoretical Studies (HITS gGmbH)
Projects: SysMO-LAB
Institutions: University of Rostock
Projects: SysMO-LAB
Institutions: Norwegian University of Life Sciences
Projects: SysMO-LAB, Sustainable co-production
Institutions: University of Amsterdam, Wageningen University & Research
Projects: SysMO-LAB
Institutions: Norwegian University of Life Sciences
I'm a biologist working in the field of scientific datases as a biocurator.
Projects: SysMO DB, FAIRDOM, ICYSB 2015 - International Practical Course in Systems Biology, ZucAt, SysMO-LAB, Kinetics on the move - Workshop 2016, Example use cases, FAIRDOM user meeting, ErasysApp Funders, EraCoBiotech 2 nd call proposal preparation, Service to URV Tarragona, Spain with respect to their Safety Assessment of Endocrine Disrupting Chemicals model (Active NOW), FAIRDOM & LiSyM & de.NBI Data Structuring Training, MESI-STRAT, INCOME, Multiscale modelling of state transitions in the host-microbiome-brain network, BESTER, TRALAMINOL, Sustainable co-production, INDIE - Biotechnological production of sustainable indole, Extremophiles metabolsim, PoLiMeR - Polymers in the Liver: Metabolism and Regulation, OLCIR: Optimization of Lung Cancer Therapy with Ionizing Radiation, NAD COMPARTMENTATION, HOTSOLUTE, Stress granules, FAIRDOM Community Workers, GMDS Project Group "FAIRe Dateninfrastrukturen für die Biomedizinische Informatik", Mechanism based modeling viral disease ( COVID-19 ) dynamics in human population, COVID-19 Disease Map, AquaHealth (ERA-BlueBio), LiSyM Core Infrastructure and Management (LiSyM-PD), Early Metabolic Injury (LiSyM-EMI - Pillar I), Regeneration and Repair in Acute-on-Chronic Liver Failure (LiSyM-ACLF - Pillar III), Chronic Liver Disease Progression (LiSyM-DP - Pillar II), Liver Function Diagnostics (LiSyM-LiFuDi - Pillar IV), The Hedgehog Signalling Pathway (LiSyM-JGMMS), Multi-Scale Models for Personalized Liver Function Tests (LiSyM-MM-PLF), Model Guided Pharmacotherapy In Chronic Liver Disease (LiSyM-MGP), Molecular Steatosis - Imaging & Modeling (LiSyM-MSIM), Modelling COVID-19 epidemics, SNAPPER: Synergistic Neurotoxicology APP for Environmental Regulation, SCyCode The Autotrophy-Heterotrophy Switch in Cyanobacteria: Coherent Decision-Making at Multiple Regulatory Layers, SASKit: Senescence-Associated Systems diagnostics Kit for cancer and stroke, CC-TOP, BioCreative VII, MESI-STRAT Review, SDBV/HITS, MESI-Review 2024
Institutions: Heidelberg Institute for Theoretical Studies (HITS gGmbH), FAIRDOM User meeting, Norwegian University of Science and Technology, University of Rostock, University of Innsbruck
https://orcid.org/0000-0003-3540-0402I am a researcher at the Scientific Databases and Visualization Group at Heidelberg Institute for Theoretical Studies (HITS) , one of the developers of SabioRK - System for the Analysis of Biochemical Pathways - Reaction Kinetics (http://sabiork.h-its.org/) . I am working on design and maintenance of the information systems to store, query and analyse systems biology data; definition and implementation of methods for the integration of data from multiple sources. In **[SySMO-DB ...
Projects: SysMO-LAB
Institutions: University of Rostock
PD Dr. rer. nat. habil. Bernd Kreikemeyer is the head of a research group at the Inst. of Medical Microbiology and Hospital Hygiene focusing on the pathogenesis of the human LAB Streptococcus pyogenes, microbial biofilm biology, and oral microbiology. Streptococcus pyogenes research, which is the relevant part for this BMBF proposal, is focused on 1. Identification of GAS virulence factors, 2. Mechanisms of GAS host cell adherence, host cell internalization, cytotoxicity of GAS towards host cells ...
Projects: SysMO-LAB, Kinetics on the move - Workshop 2016, de.NBI-SysBio
Institutions: University of Heidelberg
Ursula Kummer is heading the dept. "Modeling of Biological Processes" at the University of Heidelberg.
Projects: SysMO-LAB
Institutions: University of Heidelberg
I am working on a kinetic model of the central metabolism as well as on a genome wide model of Streptococcus pyogenes.
Projects: SysMO-LAB
Institutions: Norwegian University of Life Sciences
Post doc. in the SysMO-LAB2 project from August 2010. I work at Nofima and the Norwegian University of Life Sciences (UMB) at Ås, Norway. My focus in SysMO-LAB2 will be on four Lactobacillus plantarum strains, diversity analysis, omics-technologies, genome scale modelling.
Background: Ph.D. in Molecular Microbiology June 2010, where I worked with Lactobacillus sakei, metabolism and diversity studies.
Projects: SysMO-LAB
Institutions: Norwegian University of Life Sciences
Projects: SysMO-LAB
Institutions: Wageningen University & Research
I'm a modeller, specialized in kinetic modeling of biochemical networks. My focus in the SysMO-LAB consortium is on creating models of Lactococcus lactis glycolysis and couple this to other related lactic acid bacteria like Streptococcus pyogenes and Enterococcus faecalis. Besides kinetic modeling, I'm also interested in combining various modeling techniques (genome-scale modeling, qualitative modeling).
Projects: SysMO-LAB
Institutions: Norwegian University of Life Sciences
Professor in biotechnology at the Dept. Chemistry, Biotechnology and Food Science. I am heading "Laboratory of microbial gene technology and food microbiology" that consists of approximately 20 members (staff members, technicians,and students). During the last 20 years my research has been focused on lactica acid bacteria with a focus on bacteriocins of lactic acid bacteria.These studies have included purification and chemical and genetic characterization of such peptides followed by biosynthesis ...
Projects: SysMO-LAB, de.NBI-SysBio, Kinetics on the move - Workshop 2016, Example use cases, SBEpo - Systems Biology of Erythropoietin, FAIRDOM & LiSyM & de.NBI Data Structuring Training, FAIRDOM, EnzymeML, FAIRDOM Community Workers, GMDS Project Group "FAIRe Dateninfrastrukturen für die Biomedizinische Informatik", MIX-UP, COVID-19 Disease Map, ERNEST Mapping Group Pilot Study, CC-TOP, SABIO-VIS, SDBV/HITS
Institutions: Heidelberg Institute for Theoretical Studies (HITS gGmbH)
Within the de.NBI project my functions in the de.NBI-SysBio node comprise content curation, requirements elicitation, and community engagement for the users of biochemical reaction kinetics database SABIO-RK as well as of the data management platform SEEK.
Projects: MOSES, PSYSMO, SysMO-LAB, SulfoSys
Institutions: Manchester Centre for Integrative Systems Biology, University of Manchester
Projects: SysMO-LAB
Institutions: University of Rostock