Postdoc @ Institute of Medical Microbiology, University of Rostock
SEEK ID: https://fairdomhub.org/people/57
Location: Germany
ORCID: Not specified
Joined: 17th Jun 2009
Related items
- Programmes (1)
- Projects (1)
- Institutions (1)
- Assays (1)
- Data files (6)
- SOPs (3)
- Publications (8)
- Presentations (1)
- Events (1)
SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB, SysMO Funders, SilicoTryp, Noisy-Strep
Web page: http://sysmo.net/
Comparative Systems Biology: Lactic Acid Bacteria
Programme: SysMO
Public web page: http://www.sysmo.net/index.php?index=57
S. pyogenes M49 (591), E. faecalis V583, and L. lacis NZ9000 and their isogenic ldh deletion mutants were grown glucose free CDM-LAB medium in BIOLOG phenotype microarray plates PM01 and PM02. With this assay the abilitiy of the strains to grow on 190 different carbon sources was determined in 96 well format.
Submitter: Tomas Fiedler
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Investigation of glycolysis and pyruvate branch...
Creator: Tomas Fiedler
Submitter: The JERM Harvester
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creator: Tomas Fiedler
Submitter: The JERM Harvester
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Measurements on Km, Vmax and allosteric activation or inhibition of the main L-lactate dehydrogenase
Creator: Tomas Fiedler
Submitter: Martijn Bekker
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
. L. lactis (NZ9000), E. faecalis (V538) and S. pyogenes (M49) wild type strain and their ldh- mutants were grown in batch cultures at 37°C in anaerobic 96 wells plates in either TH-broth supplemented with 0.5% (w/v) yeast (THY) or a chemically defined medium for LAB (pH 7.4) (CDM-LAB (10)). Both media were buffered with either 100 mM MES buffer or 100 mM MOPS buffer for growth at pH 6.5 and 7.5 respectively.
Creators: Martijn Bekker, Tomas Fiedler
Submitter: Martijn Bekker
S. pyogenes was grown in C-limited cultures at pH 6.7 and 7.5 and at a growth rate of 0.05 and 0.15
Creators: Martijn Bekker, Tomas Fiedler
Submitter: Martijn Bekker
Heterologous Expression of LDHs from different lactic acid bacteria in Escherichia coli DH5α.
Assessment of kinetic parameters of LDH to include in a catabolic model.
Creators: Silvio Hering, Tomas Fiedler
Submitter: Silvio Hering
Creator: Tomas Fiedler
Submitter: Tomas Fiedler
Creator: Tomas Fiedler
Submitter: Tomas Fiedler
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creators: Holger Janssen, Tomas Fiedler
Submitter: Holger Janssen
Investigations: The effect of pH upon the metabolic shift in Cl...
Studies: Effect of pH on the proteome
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Date Published: 1st Jul 2013
Publication Type: Not specified
DOI: 10.1016/j.pep.2013.07.002
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Date Published: 14th Feb 2012
Publication Type: Not specified
PubMed ID: 22325620
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Authors: Ulrike Wittig, , Martin Golebiewski, , Lei Shi, Lenneke Jong, Enkhjargal Algaa, Andreas Weidemann, Heidrun Sauer-Danzwith, Saqib Mir, , Meik Bittkowski, Elina Wetsch, ,
Date Published: 22nd Nov 2011
Publication Type: Journal
PubMed ID: 22102587
Citation: Nucleic Acids Res. 2012 Jan;40(Database issue):D790-6. doi: 10.1093/nar/gkr1046. Epub 2011 Nov 18.
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Authors: , Ellen M Faergestad, , Lars Snipen, ,
Date Published: 1st Nov 2011
Publication Type: Not specified
PubMed ID: 22038603
Citation:
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Authors: , , Ellen M Fergestad, Geir Mathiesen, ,
Date Published: 8th Feb 2011
Publication Type: Not specified
PubMed ID: 21296946
Citation:
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Authors: , Venelina Sugareva, Nadja Patenge,
Date Published: 8th Dec 2010
Publication Type: Not specified
PubMed ID: 21133689
Citation:
Abstract (Expand)
Authors: , , , , Anja Pritzschke, Nikolai Siemens, , ,
Date Published: 25th Nov 2010
Publication Type: Not specified
PubMed ID: 21097579
Citation:
Start Date: 9th Jun 2013
End Date: 10th Jun 2013
Event Website: Not specified
Country: Netherlands
City: Amsterdam