Projects: NL-Bioimaging FAIR Metadata Templates
Institutions: University of Leiden
https://orcid.org/0000-0002-0615-9616Projects: GenoSysFat, DigiSal, SEEK tutorial for DigiSal, PhD Nicotinic Acetylcholine Receptors
Institutions: Norwegian University of Life Sciences
https://orcid.org/0000-0003-0089-0608Expertise: Molecular Biology, Cell biology, transcriptional regulation, Genetics, Microbiology
Tools: R, Cell and tissue culture, PCR, Latex, Genetic analysis
Ph.D. student at the Norwegian University of Life Sciences interested in protein stoichiometry and genetics. Currently, I am studying nicotinic acetylcholine receptors in salmon lice, in an effort to understand how they function, their stoichimetric structure and their importance to the salmon louse. This is part of a larger fundamental research project which covers several invertebrates including bees, mosquitos and ticks, as ...
Projects: COVID-19 Disease Map
Institutions: University College London (UCL)
https://orcid.org/0000-0003-3171-6098Projects: Not specified
Institutions: Not specified
Expertise: Cell biology, DNA repair, Cancer Biology, Cancer research, Molecular Biology, Curation, Cell physiology, Data analysis, Visualization, Graphical Editors, Image analysis
Tools: Animal models, Cell and tissue culture, In vivo bioluminescence imaging, Molecular biology techniques (RNA/DNA/Protein), Cytometry and fluorescent microscopy, Adobe Illustrator, GraphPad Prism, Adobe Photoshop
M.Sc. graduate specializing in medical science, translational cancer research, cell biology, and DNA damage repair.
Expertise: Biochemistry, Cell biology, Data analysis, Dynamic modelling, Systems Biology, Image analysis, Genetics, Molecular Biology, R, SBML, Curation, Quantitative Biology, Physical Chemistry
Tools: Biochemistry and protein analysis, Bioinformatics, Systems Biology, SBML, R, ODE, Molecular biology techniques (RNA/DNA/Protein), Genetics, Dynamic modelling, Computational and theoretical biology, CellDesigner, Parameter estimation
Projects: COVID-19 Disease Map
Institutions: Integrative BioInformatics Inc.
https://orcid.org/0000-0001-7979-2386Expertise: Cell physiology, Cell biology, ODE modeling, Human physiology, Kinetics, Tracer Kinetics
Location: Mountain View, CA, USA
Projects: iRhythmics
Institutions: Leibniz Institute for Farm Animal Biology (FBN)
https://orcid.org/0000-0002-7968-3152Projects: iRhythmics
Institutions: Rostock University Medical Centre
Projects: iRhythmics
Institutions: Rostock University Medical Centre
Projects: iRhythmics
Institutions: Rostock University Medical Centre
https://orcid.org/0000-0001-6287-4916Projects: Not specified
Institutions: Not specified
I am performing research in biomarkers discovery, particularly regarding liver fibrosis in non-alcoholic fatty liver disease. My research activities involved the use of bioinformatic platforms, the analysis of biological protein-protein interaction networks and the experimental validation of candidates by ELISA.
Prof. Dr. Kathrin Thedieck MESI-STRAT Coordinator Leader WP8 – Project Coordination
Projects: SBEpo - Systems Biology of Erythropoietin
Institutions: German Cancer Research Center (DKFZ)
https://orcid.org/0000-0002-0971-2309Expertise: Mathematical modelling, Single Cell analysis, Cell biology, Molecular Biology
Tools: Biochemistry, Systems Biology, Matlab, R
Projects: The Hedgehog Signalling Pathway (LiSyM-JGMMS)
Institutions: Universität Leipzig - Medizinische Fakultät - Institut für Biochemie
Expertise: Biochemistry, Cell biology, Molecular Biology
Tools: Biochemistry
Expertise: chromatin, Epigenetics, nuclear organisation, DNA repair
Tools: quantitative microscopy, Biochemistry, Systems Biology, Cell biology
POSITION I am an emeritus professor in Biochemistry at the University of Amsterdam (retired 2010).
RESEARCH My research focussed on the human chromatin in its natural environment, i.e. the nucleus of cultured living human cells. Aspects, such as the dynamic folding of the chromatin fiber inside the nucleus and local chemical modification of histones and DNA at genetic loci, are the physical and chemical basis for epigenetic regulation of gene expression. In my group we worked parallel on human ...
Projects: FAIRDOM user meeting
Institutions: KAIST
Expertise: Cell biology, Molecular Biology, Cancer, Stem cell
Tools: Boolean modeling, Systems Biology
Expertise: Microbiology, genetic engineering, Fermentation, Cell biology, Metabolic Engineering
Research Scientist in the Biotechnology and Nanomedicine department at the non-profit research institution, SINTEF, in Norway.
Projects: ICYSB 2015 - International Practical Course in Systems Biology
Institutions: Max-Planck Institute for Molecular Genetics
Expertise: Cell biology, Molecular Biology, Transcriptomics, Proteomics
Projects: ICYSB 2015 - International Practical Course in Systems Biology
Institutions: University of Tokyo
Expertise: Genetics, Genomics, Cell biology, Image analysis, Phenome, Genetic interaction
Tools: Fluorescence microscopy, CalMorph, R, Java, GLM, Model selection
I am a postdoc in The University of Tokyo. My research interest is to know structure of biological systems by functional relationships between genes working in response to endogenous and/or exogenous disruptions. I'm trying to find functional relationships between genes by similarity of phenotype defined with high-dimensional morphological features in yeast gene deletion collection. I'm happy if you will talk with me in any topics.
Projects: ICYSB 2015 - International Practical Course in Systems Biology
Institutions: Åbo Akademi University
Projects: Not specified
Institutions: Not specified
Expertise: Signalling networks
Tools: quantitative western blot analyses, qRT-PCR, Cell biology, Cell and tissue culture
Projects: SysMO-LAB
Institutions: Wageningen University & Research
Expertise: Bioinformatics, Mathematical modelling, Reactor models, dynamics of biological networks.
Tools: Molecular Biology, Cell biology, Computational and theoretical biology, Metabolomics, Model organisms, SBML, ODE, Partial differential equations, Algebraic equations, Linear equations, Copasi, JWS Online, Matlab, Mathematica, SQL, Material balance based modeling
I'm a modeller, specialized in kinetic modeling of biochemical networks. My focus in the SysMO-LAB consortium is on creating models of Lactococcus lactis glycolysis and couple this to other related lactic acid bacteria like Streptococcus pyogenes and Enterococcus faecalis. Besides kinetic modeling, I'm also interested in combining various modeling techniques (genome-scale modeling, qualitative modeling).
Projects: BaCell-SysMO
Institutions: University of Erlangen-Nuernberg
Expertise: Bacillus subtilis, functional protein expression, bacterial metabolism, carbon metabolism, Bacterial Cell Biology, Protein-DNA-interaction, Microbiology/ Protein chemistry/ Molecular Biology, Cell physiology, regulation of gene expression, quantative biology
Tools: Microbiology, Biochemistry and protein analysis, Cell biology, Model organisms, Chromatography, Molecular biology techniques (RNA/DNA/Protein), DNA, surface plasmon resonance spectroscopy, reporter gene analysis
Projects: BaCell-SysMO
Institutions: University of Newcastle
Expertise: Microbiology, Molecular Biology, Gram positive bacteria (Bacillus, Systems Biology, Genetics)
Tools: Microbiology, Molecular Biology, Biochemistry and protein analysis, Cell biology, Genetic analysis, Genomics, Transcriptomics, Proteomics, Model organisms, Proteomics (2D-PAGE), gene regulation, DNA technology RNA technology Protein analysis Fermentation Mutagenesis, molecular biological techniques (RNA/DNA techniques), protein interaction studies
Optimisation of Bacillus subtilis for the secretion of heterologous proteins Therapeutic proteins (including those required for experimental purposes and clinical trials) are major products of biomanufacturing processes and considerable time and expense are expended to maximise the yield and quality of proteins produced in heterologous hosts. The production host of choice is the Gram-negative bacterium Escherichia coli for which many strains and expression systems have been developed. However, ...