Alexey Kolodkin

About Alexey Kolodkin:

I have modelling expertise in precise kinetic models of metabolism and signal transduction; metabolic control analysis, hierarchical regulation analysis, non-equilibrium dynamics, statistical mechanics, enzyme kinetics, flux balance analysis. Energy and carbohydrate metabolism in Archaea, Bacteria and human; ammonium assimilation in Bacteria; differential network-based drug design; cancer metabolic rewiring; cell cycle; genome wide metabolic map and inborn errors of metabolism; epigenetics.

SEEK ID: https://fairdomhub.org/people/260

Locations:  Netherlands ,  Luxembourg

Expertise: Not specified

Tools: Not specified

ORCID: Not specified

Project positions

Service to Milano-Bicocca with respect to their ATP-ROS model (Active NOW) (University of Amsterdam) ; Make Me My Model (VU University Amsterdam)

SulfoSys (University of Amsterdam) ; FAIRDOM user meeting (VU University Amsterdam) ; Service to University of Lisbon (Portugal) with respect to their CFTR maturation model (Active NOW) (Infrastructure Systems Biology Europe) ; Service to LCSB (Luxembourg) with respect to ROS management in Parkinson’s disease and cancer model (Active NOW) (Infrastructure Systems Biology Europe) ; Service to URV Tarragona, Spain with respect to their Safety Assessment of Endocrine Disrupting Chemicals model (Active NOW) (Infrastructure Systems Biology Europe) ; Service to Universidade Católica Portugues with respect to their Molecular Insight into Autism Spectrum Disorder (ASD) model (Active NOW) (Infrastructure Systems Biology Europe) ; Service to Slovenia with respect to their Protease signaling network in neurodegeneration model (Active NOW) (Infrastructure Systems Biology Europe) ; Service to University of Duisburg- Essen (Germany): with respect to their The Yin-Yang of Metabolism; Endometatoxicity (YYME) model (Active NOW) (Infrastructure Systems Biology Europe) ; Service to Sheffield University (UK): with respect to Mitochondrial perfect adaptation model (Active NOW) (Infrastructure Systems Biology Europe) ; Service to Sanquin (Amsterdam): with respect to Modelling of acute and chronic inflammation (Prospective) (Infrastructure Systems Biology Europe) ; Service to Munich (Germany): with respect toCharged peptide to charged membrane binding model (Prospective) (Infrastructure Systems Biology Europe) ; Training Hunfeld (Infrastructure Systems Biology Europe) ; EraCoBiotech 2 nd call proposal preparation (University of Amsterdam) ; ROS detailed model for MSB manucript (VU University Amsterdam) ; Mechanism based modeling viral disease ( COVID-19 ) dynamics in human population (University of Amsterdam) ; Mechanism based modeling viral disease ( COVID-19 ) dynamics in human population (University of Luxembourg) ; Mechanism based modeling viral disease ( COVID-19 ) dynamics in human population (Luxembourg Centre for Systems Biomedicine (LCSB)) ; COVID-19 Disease Map (Luxembourg Centre for Systems Biomedicine (LCSB))

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