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- Whole body modelling of glucose metabolism in malaria patients
Hypoglycaemia and lactic acidosis are key diagnostics for poor chances of survival in malaria patients. In this project we aim to test to what extent the metabolic activity of Plasmodium falciparum contributes to a changed glucose metabolism in malaria patients. The approach is to start with detailed bottom up models for the parasite and then merge these with more coarse grained models at the whole body level.
Programme: SARCHI: Mechanistic modelling of health and epidemiology
SEEK ID: https://fairdomhub.org/projects/17
Public web page: Not specified
Organisms: Plasmodium falciparum, Homo sapiens
FAIRDOM PALs: No PALs for this Project
Project created: 31st Jul 2014
Related items
- People (5)
- Institutions (3)
- Investigations (1)
- Studies (3)
- Assays (24)
- Data files (16)
- Models (23)
- SOPs (17)
- Publications (3)
Projects: PSYSMO, MOSES, SysMO DB, SysMO-LAB, SulfoSys, SulfoSys - Biotec, Whole body modelling of glucose metabolism in malaria patients, FAIRDOM, Molecular Systems Biology, COMBINE Multicellular Modelling, HOTSOLUTE, Steroid biosynthesis, Yeast glycolytic oscillations, Computational pathway design for biotechnological applications
Institutions: Manchester Centre for Integrative Systems Biology, University of Manchester, University of Stellenbosch, University of Manchester - Department of Computer Science, Stellenbosch University
Projects: SysMO DB, Whole body modelling of glucose metabolism in malaria patients, Manchester Institute for Biotechnology, FAIRDOM, ICYSB 2015 - International Practical Course in Systems Biology, GenoSysFat, DigiSal, FAIRDOM user meeting, FAIRDOM Templates
Institutions: University of Manchester - Department of Computer Science, Manchester Centre for Integrative Systems Biology, University of Manchester

Roles: Postdoc
Expertise: Systems Biology, Metabolic Engineering, Stoichiometric modelling, Kinetic modelling, Data Management, Metabolic Networks
Tools: Python, Copasi, Matlab, COBRA toolbox
Interested in systems + synthetic biology, biotechnology, mountaineering, swimming, running, and the occasional cup of tea. Once diagnosed as an ENFP.
The investigation entails the construction and validation of a detailed mathematical model for glycolysis of the malaria parasite Plasmodium falciparum in the blood stage trophozoite form.
Snapshots: Snapshot 1
Studies: Model analysis, Model construction, Model validation
Assays: ALD, ATPASE, Culturing and synchronisation of P. falciparum, ENO, G3PDH, GAPDH, GLC incubation, GLCtr, GLYtr, HK, Inhibition of glucose transport, Inhibition of lactate flux, LACtr, LDH, PFK, PGI, PGK, PGM, PK, PYRtr, Steady state, Supply-demand analysis, TPI, Trophozoite Isolation and Lysate Preparation
This study includes the experimental data for model validation and the model predictions of that data set.
Person responsible: Dawie van Niekerk
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Assays: GLC incubation, Steady state
This study includes all the experimental data, SOPs and modelling files for the individual reactions used for the model construction.
Person responsible: Jacky Snoep
Snapshots: No snapshots
Submitter: Dawie van Niekerk
Assay type: Experimental Assay Type
Technology type: Technology Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
SOPs: No SOPs
Data files: No Data files
Assay for the isolation of intact Plasmodium falciparum trophozoites from infected red blood cells and the preparation of a cell free extract that can be used for kinetic analyses.
Submitter: Dawie van Niekerk
Assay type: Experimental Assay Type
Technology type: Technology Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
SOPs: No SOPs
Data files: No Data files
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model analysis
Organisms: Plasmodium falciparum
Models: GLCtr kinetic model incorporating inhibition
SOPs: No SOPs
Data files: GLCtr inhibition kinetic data
Inhibition of lactate flux due to glucose transport inhibitor
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model analysis
Organisms: Plasmodium falciparum
Models: Kinetic model for steady state (penkler1), Kinetic model incorporating glucose transport i..., Validation of lactate flux inhibition by glucos...
SOPs: No SOPs
Data files: Lactate flux inhibition data
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model analysis
Organisms: Plasmodium falciparum
Models: Kinetic model for steady state (penkler1), Supply demand analysis on penkler1 model
SOPs: No SOPs
Data files: No Data files
Kinetic characterisation en mathematical modelling of HK.
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: Snapshot 1
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: HK Kinetic model
SOPs: HK Kinetic characterisation
Data files: HK Kinetic data
Kinetic characterisation en mathematical modelling of PGI.
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: PGI Kinetic model
SOPs: PGI Kinetic characterisation
Data files: PGI Kinetic data
Kinetic characterisation en mathematical modelling of PFK.
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: PFK Kinetic model
SOPs: PFK Kinetic characterisation
Data files: PFK Kinetic data
Kinetic characterisation en mathematical modelling of ALD.
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: ALD Kinetic model
SOPs: ALD Kinetic characterisation
Data files: ALD Kinetic data
Kinetic characterisation en mathematical modelling of TPI.
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: TPI Kinetic model
SOPs: TPI Kinetic characterisation
Data files: TPI Kinetic data
Kinetic characterisation en mathematical modelling of G3PDH.
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: G3PDH Kinetic model
SOPs: G3PDH Kinetic characterisation
Data files: G3PDH Kinetic data
Kinetic characterisation en mathematical modelling of GAPDH.
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: GAPDH Kinetic model
SOPs: GAPDH Kinetic characterisation
Data files: GAPDH Kinetic data
Kinetic characterisation en mathematical modelling of PGK.
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: PGK Kinetic model
SOPs: PGK Kinetic characterisation
Data files: PGK Kinetic data
Kinetic characterisation en mathematical modelling of PGM.
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: PGM Kinetic model
SOPs: PGM Kinetic characterisation
Data files: PGM Kinetic data
Kinetic characterisation en mathematical modelling of ENO.
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: ENO Kinetic model
SOPs: ENO Kinetic characterisation
Data files: ENO Kinetic data
Kinetic characterisation en mathematical modelling of PK.
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: PK Kinetic model
SOPs: PK Kinetic characterisation
Data files: PK Kinetic data
Kinetic characterisation and mathematical modelling of LDH.
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: LDH Kinetic model
SOPs: LDH Kinetic characterisation
Data files: LDH Kinetic data
SED-ML simulation: https://jjj.bio.vu.nl/models/experiments/penkler2aa_experiment-user/simulate
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model validation
Organisms: No organisms
Models: Kinetic model for incubation (penkler2)
SOPs: Validation experiments
Data files: 5mM GLC runout data.
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: GLCtr Kinetic model
SOPs: No SOPs
Data files: GLCtr Kinetic data
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model construction
Organisms: No organisms
Models: No Models
SOPs: No SOPs
Data files: No Data files
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model analysis
Assays: Inhibition of lactate flux
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model analysis
Assays: Inhibition of glucose transport
Experimental data set for the kinetic characterisation of G3PDH
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: G3PDH
Experimental data set for the kinetic characterisation of ALD
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: ALD
Experimental data set for the kinetic characterisation of ENO
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: ENO
Experimental data set for the kinetic characterisation of GAPDH
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: GAPDH
Experimental data set for the kinetic characterisation of LDH
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: LDH
Experimental data set for the kinetic characterisation of PGI
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: PGI
Experimental data set for the kinetic characterisation of HK
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: HK
Experimental data set for the kinetic characterisation of PFK
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: PFK
Experimental data set for the kinetic characterisation of PGK
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: PGK
Experimental data set for the kinetic characterisation of TPI
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: TPI
Experimental data set for the kinetic characterisation of the glucose transport reaction
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: GLCtr
Experimental data set for the kinetic characterisation of PK
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: PK
Experimental data for the phosphoglycerate mutase (EC 5.4.2.12) activity.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: PGM
Timecourses of GLC (starting at 5 mM) and LAC, PYR, GLY in the closed system.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model validation
Assays: GLC incubation
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: SBML
Environment: Not specified
Organism: Plasmodium falciparum
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model analysis
Modelling analyses: Inhibition of lactate flux
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Plasmodium falciparum
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model analysis
Modelling analyses: Inhibition of glucose transport
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Plasmodium falciparum
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model analysis
Modelling analyses: Inhibition of lactate flux
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model analysis
Modelling analyses: Supply-demand analysis
Glycolytic model for Plasmodium falciparum; open system
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: SBML
Environment: JWS Online
Organism: Not specified
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model analysis, Model validation
Modelling analyses: Inhibition of lactate flux, Steady state, Supply-demand analysis
Mathematica notebook for the parameterisation of the glucose transport rate equation based on SEEK linked experimental data.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Modelling analyses: GLCtr
Glycolytic model for Plasmodium falciparum; closed system
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: SBML
Environment: JWS Online
Organism: Not specified
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model validation
Modelling analyses: GLC incubation
Mathematica notebook for the parameterisation of the G3PDH rate equation based on SEEK linked experimental data.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Modelling analyses: G3PDH
Mathematica notebook for the parameterisation of the ALD rate equation based on SEEK linked experimental data.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Modelling analyses: ALD
Mathematica notebook for the ATPase reaction.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: No Investigations
Studies: No Studies
Modelling analyses: No Modelling analyses
Mathematica notebook for the parameterisation of the ENO rate equation based on SEEK linked experimental data.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Modelling analyses: ENO
Mathematica notebook for the lactate transport rate equation, based on literature data.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: No Investigations
Studies: No Studies
Modelling analyses: No Modelling analyses
Mathematica notebook for the glycerol transport rate equation.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: No Investigations
Studies: No Studies
Modelling analyses: No Modelling analyses
Mathematica notebook for the parameterisation of the GAPDH rate equation based on SEEK linked experimental data.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Modelling analyses: GAPDH
Mathematica notebook for the parameterisation of the PGI rate equation based on SEEK linked experimental data.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Modelling analyses: PGI
Mathematica notebook for the parameterisation of the LDH rate equation based on SEEK linked experimental data.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Modelling analyses: LDH
Mathematica notebook for the parameterisation of the TPI rate equation based on SEEK linked experimental data.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Modelling analyses: TPI
Mathematica notebook for the parameterisation of the PFK rate equation based on SEEK linked experimental data.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Modelling analyses: PFK
Mathematica notebook for the pyruvate transport rate equation, based on literature data.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: No Investigations
Studies: No Studies
Modelling analyses: No Modelling analyses
Mathematica notebook for the parameterisation of the PGK rate equation based on SEEK linked experimental data.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: Mathematica
Environment: Not specified
Organism: Not specified
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Modelling analyses: PGK
SOP for the determination of external metabolites (Glc, Pyr, Gly, Lac) in intact trophozoite incubations, and for the determination of intracellular metabolite concentrations.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model validation
Assays: GLC incubation, Steady state
SOP for the cultivation conditions of Plasmodium falciparum, including the protocol for synchronisation.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
SOP for measurement of G3PDH activity in extracts.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: G3PDH
SOP for measurement of ALD activity in extracts.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: ALD
SOP for measurement of glucose transport activity in intact trophozoites.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
SOP for measurement of GAPDH activity in extracts.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: GAPDH
SOP for measurement of ENO activity in extracts.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: ENO
SOP for measurement of HK activity in extracts.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: HK
SOP for measurement of PFK activity in extracts.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: PFK
SOP for measurement of LDH activity in extracts.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: LDH
SOP for measurement of PGK activity in extracts.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: PGK
SOP for measurement of PK activity in extracts.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: PK
SOP for measurement of PGM activity in extracts.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
SOP for measurement of PGI activity in extracts.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: PGI
SOP for measurement of PGM activity in extracts.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: PGM
SOP for measurement of TPI activity in extracts.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: Glucose metabolism in Plasmodium falciparum tro...
Studies: Model construction
Assays: TPI
SOP for the isolation of intact Plasmodium falciparum trophozoites from infected red blood cells and the preparation of a cell free extract that can be used for kinetic analyses.
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Abstract (Expand)
Authors: David D. van Niekerk, Gerald P. Penkler, Francois du Toit, Jacky L. Snoep
Date Published: 1st Feb 2016
Publication Type: Not specified
DOI: 10.1111/febs.13615
Citation: FEBS J 283(4) : 634
Abstract (Expand)
Authors: J. L. Snoep, K. Green, J. Eicher, D. C. Palm, G. Penkler, F. du Toit, N. Walters, R. Burger, H. V. Westerhoff, D. D. van Niekerk
Date Published: 27th Nov 2015
Publication Type: Not specified
DOI: 10.1042/BST20150145
Citation: Biochemical Society Transactions 43(6) : 1157
Abstract (Expand)
Authors: Gerald Penkler, Francois du Toit, Waldo Adams, Marina Rautenbach, Daniel C. Palm, David D. van Niekerk, Jacky L. Snoep
Date Published: 1st Apr 2015
Publication Type: Not specified
DOI: 10.1111/febs.13237
Citation: FEBS J 282(8) : 1481