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- Yeast glycolytic oscillations
Programme: SARCHI: Mechanistic modelling of health and epidemiology
SEEK ID: https://fairdomhub.org/projects/113
Public web page: Not specified
Organisms: Saccharomyces cerevisiae
FAIRDOM PALs: No PALs for this Project
Project created: 16th Jul 2018
Related items
Projects: PSYSMO, MOSES, SysMO DB, SysMO-LAB, SulfoSys, SulfoSys - Biotec, Whole body modelling of glucose metabolism in malaria patients, FAIRDOM, Molecular Systems Biology, COMBINE Multicellular Modelling, HOTSOLUTE, Steroid biosynthesis, Yeast glycolytic oscillations, Computational pathway design for biotechnological applications
Institutions: Manchester Centre for Integrative Systems Biology, University of Manchester, University of Stellenbosch, University of Manchester - Department of Computer Science, Stellenbosch University
Snapshots: No snapshots
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Studies: Entrainment of heterogeneous glycolytic oscillations in single cells
Assays: No Assays
Person responsible: Dawie van Niekerk
Snapshots: No snapshots
Investigation: From steady-state to synchronized yeast glycoly...
Assays: No Assays
Person responsible: Dawie van Niekerk
Snapshots: No snapshots
Investigation: From steady-state to synchronized yeast glycoly...
Assays: No Assays
Person responsible: Dawie van Niekerk
Snapshots: No snapshots
Investigation: Glycolytic oscillations in individual isolated ...
Assays: gustavsson1-4 models
Person responsible: Dawie van Niekerk
Snapshots: No snapshots
Investigation: Glycolytic oscillations in individual isolated ...
Assays: No Assays
Person responsible: Dawie van Niekerk
Snapshots: No snapshots
Investigation: Glycolytic oscillations in individual isolated ...
Assays: gustavsson5 model
Person responsible: Dawie van Niekerk
Snapshots: No snapshots
Investigation: Phase shift responses in isolated yeast glycoly...
Assays: No Assays
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glycolytic oscillations in individual isolated ...
Study: Sustained glycolytic oscillations in individual...
Organisms: No organisms
Models: gustavsson1-4 models
SOPs: No SOPs
Data files: No Data files
Model of glycolytic oscillations in individual yeast cells in microfluidic flow chamber
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Snapshots: No snapshots
Investigation: Glycolytic oscillations in individual isolated ...
Study: Allosteric regulation of phosphofructokinase co...
Organisms: No organisms
Models: gustavsson5 model
SOPs: No SOPs
Data files: No Data files
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: SBML
Environment: Not specified
Organism: Not specified
Investigations: Glycolytic oscillations in individual isolated ...
Studies: Sustained glycolytic oscillations in individual...
Modelling analyses: gustavsson1-4 models
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: SBML
Environment: JWS Online
Organism: Saccharomyces cerevisiae
Investigations: Glycolytic oscillations in individual isolated ...
Studies: Allosteric regulation of phosphofructokinase co...
Modelling analyses: gustavsson5 model
Abstract (Expand)
Authors: Anna-Karin Gustavsson, Caroline B. Adiels, Bernhard Mehlig, Mattias Goksör
Date Published: 1st Aug 2015
Publication Type: Not specified
DOI: 10.1038/srep09404
Citation: Sci Rep 5(1) : 415
Abstract
Authors: Anna-Karin Gustavsson, David D. van Niekerk, Caroline B. Adiels, Bob Kooi, Mattias Goksör, Jacky L. Snoep
Date Published: 1st Jun 2014
Publication Type: Not specified
DOI: 10.1111/febs.12820
Citation: FEBS J 281(12) : 2784
Abstract
Authors: Anna-Karin Gustavsson, David D. van Niekerk, Caroline B. Adiels, Mattias Goksör, Jacky L. Snoep
Date Published: 3rd Jan 2014
Publication Type: Not specified
DOI: 10.1016/j.febslet.2013.11.028
Citation: Heterogeneity of glycolytic oscillatory behaviour in individual yeast cells 588(1) : 3
Abstract
Authors: Anna-Karin Gustavsson, David D. van Niekerk, Caroline B. Adiels, Franco B. du Preez, Mattias Goksör, Jacky L. Snoep
Date Published: 1st Aug 2012
Publication Type: Not specified
DOI: 10.1111/j.1742-4658.2012.08639.x
Citation: Sustained glycolytic oscillations in individual isolated yeast cells 279(16) : 2837
Abstract (Expand)
Authors: F. B. du Preez, D. D. van Niekerk, J. L. Snoep
Date Published: No date defined
Publication Type: Not specified
PubMed ID: 22686585
Citation: FEBS J. 2012 Aug;279(16):2823-36. doi: 10.1111/j.1742-4658.2012.08658.x. Epub 2012 Jul 5.
Abstract (Expand)
Authors: F. B. du Preez, D. D. van Niekerk, B. Kooi, J. M. Rohwer, J. L. Snoep
Date Published: No date defined
Publication Type: Not specified
PubMed ID: 22712534
Citation: FEBS J. 2012 Aug;279(16):2810-22. doi: 10.1111/j.1742-4658.2012.08665.x. Epub 2012 Jul 9.