Yeast glycolytic oscillations
OverviewProgramme: SARCHI: Mechanistic modelling of health and epidemiology
SEEK ID: https://fairdomhub.org/projects/113
Public web page: Not specified
Organisms: Saccharomyces cerevisiae
FAIRDOM PALs: No PALs for this Project
Project created: 16th Jul 2018
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Projects: PSYSMO, MOSES, SysMO DB, SysMO-LAB, SulfoSys, SulfoSys - Biotec, Whole body modelling of glucose metabolism in malaria patients, FAIRDOM, Molecular Systems Biology, COMBINE Multicellular Modelling, HOTSOLUTE, Steroid biosynthesis, Yeast glycolytic oscillations, Computational pathway design for biotechnological applications, SCyCode The Autotrophy-Heterotrophy Switch in Cyanobacteria: Coherent Decision-Making at Multiple Regulatory Layers, Project Coordination, WP 3: Drug release kinetics study, Glucose metabolism in cancer cell lines
Institutions: Manchester Centre for Integrative Systems Biology, University of Manchester, University of Stellenbosch, University of Manchester - Department of Computer Science, Stellenbosch University
https://orcid.org/0000-0003-2633-0537
The Snoep Lab’s core research efforts are in Computational Systems Biology; a combined experimental, modeling and theoretical approach to quantitatively understand the functional behavior of Biological Systems resulting from the characteristics of their components. Our main focus is on metabolism, of human pathogens such as Plasmodium falciparum, Mycobacterium tuberculosis, but also of breast cancer cell lines, and on modelling disease states such as glucose homeostatis in type 2 diabetes, and ...
Projects: Whole body modelling of glucose metabolism in malaria patients, Steroid biosynthesis, Yeast glycolytic oscillations, Computational pathway design for biotechnological applications, Glucose metabolism in cancer cell lines
Web page: http://www.sun.ac.za/english/faculty/science/biochemistry/research/snoep-group
Submitter: Dawie van Niekerk
Studies: Allosteric regulation of phosphofructokinase controls the emergence of g..., Heterogeneity of glycolytic oscillatory behaviour in individual yeast cells, Sustained glycolytic oscillations in individual isolated yeast cells
Assays: gustavsson1-4 models, gustavsson5 model
Submitter: Jacky Snoep
Studies: Entrainment of heterogeneous glycolytic oscillations in single cells
Assays: No Assays
Submitter: Dawie van Niekerk
Investigation: From steady-state to synchronized yeast glycoly...
Assays: No Assays
Submitter: Dawie van Niekerk
Investigation: From steady-state to synchronized yeast glycoly...
Assays: No Assays
Submitter: Dawie van Niekerk
Investigation: Glycolytic oscillations in individual isolated ...
Assays: gustavsson1-4 models
Submitter: Dawie van Niekerk
Investigation: Glycolytic oscillations in individual isolated ...
Assays: No Assays
Submitter: Dawie van Niekerk
Investigation: Glycolytic oscillations in individual isolated ...
Assays: gustavsson5 model
Submitter: Dawie van Niekerk
Investigation: Phase shift responses in isolated yeast glycoly...
Assays: No Assays
Model of glycolytic oscillations in individual yeast cells in microfluidic flow chamber
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Investigation: Glycolytic oscillations in individual isolated ...
Submitter: Dawie van Niekerk
Biological problem addressed: Model Analysis Type
Investigation: Glycolytic oscillations in individual isolated ...
Creators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: SBML
Environment: Not specified
DownloadCreators: Dawie van Niekerk, Jacky Snoep
Submitter: Dawie van Niekerk
Model type: Ordinary differential equations (ODE)
Model format: SBML
Environment: JWS Online
Abstract (Expand)
Authors: David D. van Niekerk, Anna-Karin Gustavsson, Martin Mojica-Benavides, Caroline B. Adiels, Mattias Goksör, Jacky L. Snoep
Date Published: 31st Jan 2019
Publication Type: Journal
Abstract (Expand)
Authors: Anna-Karin Gustavsson, Caroline B. Adiels, Bernhard Mehlig, Mattias Goksör
Date Published: 1st Aug 2015
Publication Type: Not specified
Abstract
Authors: Anna-Karin Gustavsson, David D. van Niekerk, Caroline B. Adiels, Bob Kooi, Mattias Goksör, Jacky L. Snoep
Date Published: 1st Jun 2014
Publication Type: Not specified
Abstract
Authors: Anna-Karin Gustavsson, David D. van Niekerk, Caroline B. Adiels, Mattias Goksör, Jacky L. Snoep
Date Published: 3rd Jan 2014
Publication Type: Not specified
Abstract
Authors: Anna-Karin Gustavsson, David D. van Niekerk, Caroline B. Adiels, Franco B. du Preez, Mattias Goksör, Jacky L. Snoep
Date Published: 1st Aug 2012
Publication Type: Not specified
Abstract (Expand)
Authors: F. B. du Preez, D. D. van Niekerk, J. L. Snoep
Date Published: No date defined
Publication Type: Not specified
Abstract (Expand)
Authors: F. B. du Preez, D. D. van Niekerk, B. Kooi, J. M. Rohwer, J. L. Snoep
Date Published: No date defined
Publication Type: Not specified
