Unix script for the kallisto bustools processing of scRNA-seq data
Version 1

Here, we describe the index file generation of the mm10 genome, the genome alignment with kallisto, and quantification with bustools to obtain the used spliced / unspliced transcript input.

SEEK ID: https://fairdomhub.org/models/787?version=1

1 item is associated with this Model:
  • sc_script_kal_bus.txt (Plain text document - 5.57 KB) Download

Organism: Mus musculus

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Views: 621   Downloads: 25

Created: 7th May 2021 at 15:07

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Version 1 (earliest) Created 7th May 2021 at 15:07 by Markus Wolfien

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