Chew_et_al_2014_Framework_Model version 1, Matlab and Simile
Version 1

This record includes Matlab and Simile format versions of the Arabidopsis Framework Model version 1, FMv1 (Chew et al, PNAS 2014; http://www.pnas.org/content/early/2014/08/27/1410238111), copied from the PlaSMo resource (www.plasmo.ed.ac.uk), PLM_ID=76. The model description is in the Supplementary Materials of the publication, which should be uploaded somewhere here also but I don't see how to do it.

The FMv1 links the following sub-models:

  1. Arabidopsis leaf carbohydrate model (Rasse and Tocquin) - Carbon Dynamic Model
  2. Part of the Christophe et al 2008 Functional-Structural Plant Model
  3. Chew et al 2012 Photothermal Model
  4. Salazar et al 2009 Photoperiodism Model

To run the model in Simile, please download the Evaluation Edition of the software from http://www.simulistics.com/products/simile.php and follow the instructions detailed in the PlaSMo record linked from this Model.

SEEK ID: https://fairdomhub.org/models/247?version=1

3 items (and an image) are associated with this Model:
  • 134MATLAB%20Framework%20Model.zip (Zip file - 28.8 KB) Download
  • 1020Framework%20Model%20in%20Simile.zip (Zip file - 1010 KB) Download
  • http://www.plasmo.ed.ac.uk/plasmo/models/model.shtml?accession=PLM_76 (Website) Link

Organism: Arabidopsis thaliana

Model type: Not specified

Model format: Matlab package

Execution or visualisation environment: Matlab

Model image: (Click on the image to zoom) (Original)

help Creators and Submitter
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Views: 2085   Downloads: 135

Created: 6th Feb 2017 at 14:08

Last updated: 22nd Aug 2018 at 13:40

Last used: 23rd May 2022 at 11:12

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Version 1 Created 6th Feb 2017 at 14:08 by Andrew Millar

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