40 samples data analysis - metabolite correlation

Contains the analysis of the internal metabolite concentrations of the 40 independend samples
Pearson correlation was used to generate heatmaps
Pearson correlation with p-value cutof of 0.001 was used and as input for a correlation network (grouping using H-clust)
Principal component analysis was performed on samples, F-ion and H-ion data combined and seperately
Zip files contains the data (FC.txt), PCA and heatmap plots and the script to re-generate these plots

SEEK ID: https://fairdomhub.org/assays/779

Modelling Analysis

Niels Zondervan

Projects: MycoSynVac - Engineering Mycoplasma pneumoniae as a broad-spectrum anima...

Investigation: Modelling of M. pneumoniae metabolism

Study: Metabolomics measurements

Biological problem addressed: Model Analysis Type

Organisms: No organisms

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Created: 7th Jan 2019 at 15:46

Last updated: 14th Jan 2019 at 16:00

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