Arabidopsis clock model P2011, graphical diagram - PLM_1045
Creator - Dr. Daniel D. Seaton.
Graphical overview of Arabidopsis clock model P2011 in SBGN, from SBGN-ED in VANTED v2.
N.B. to pass PlaSMo validation before update, the <sbgn> tag was back-edited from the correct string <sbgn xmlns="http://sbgn.org/libsbgn/0.2"> to <sbgn xmlns="http://sbgn.org/libsbgn/pd/0.1"> in this file. The file is still correctly opened in VANTED after this modification. The unmodified version is also attached.
Related Publications
Flis et al. (2015). Open Infrastructure. RS Open Biology. Retrieved from: dx.doi.org/10.1098/rsob.150042
Originally submitted to PLaSMo on 2015-09-07 21:12:19
SEEK ID: https://fairdomhub.org/studies/483
Millar, Andrew (ex-PlaSMo models)
Projects: Millar group, PlaSMo model repository
Experimentalists: Not specified
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Created: 10th Jan 2019 at 17:38
Last updated: 22nd Jan 2019 at 18:15
Related items
Projects: Millar group, TiMet, PHYTOCAL: Phytochrome Control of Resource Allocation and Growth in Arabidopsis and in Brassicaceae crops, POP - the Parameter Optimisation Problem, Regulation of flowering time in natural conditions, PlaSMo model repository
Institutions: University of Edinburgh
https://orcid.org/0000-0003-1756-3654
Projects: PlaSMo model repository
Institutions: University of Edinburgh
What is PlaSMo?
PlaSMo stands for Plant Systems-biology Modelling
Ensuring the achievements of yesterday's Mathematical Modellers will be available for the Systems Biologists of tomorrow.
Our aims
To identify plant mathematical models useful to the UK plant systems biology community, which are currently in a variety of legacy formats and in danger of being lost
To represent these models in a declarative XML-based format, which is closer to the systems biology standard SBML
To evaluate the behaviour
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Programme: SynthSys
Public web page: Not specified
Andrew Millar's research group, University of Edinburgh
Programme: SynthSys
Public web page: http://www.amillar.org
Collection of models submitted to PLaSMo by Andrew Millar and automatically transferred to FAIRDOM Hub.
Snapshots: No snapshots
Creator - Dr. Daniel D. Seaton. Graphical overview of Arabidopsis clock model P2011 in SBGN, from SBGN-ED in VANTED v2. N.B. to pass PlaSMo validation before update, the <sbgn> tag was back-edited from the correct string <sbgn xmlns="http://sbgn.org/libsbgn/0.2"> to <sbgn xmlns="http://sbgn.org/libsbgn/pd/0.1"> in this file. The file is still correctly opened in VANTED after this modification. The unmodified version is also attached. Related PublicationsFlis et al. (2015). Open
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Contributor: BioData SynthSys
Biological problem addressed: Gene Regulatory Network
Snapshots: No snapshots
Data file for PLaSMo accesssion ID PLM_1045, version 1
Creators: BioData SynthSys, Andrew Millar, Andrew Millar
Contributor: BioData SynthSys
Data file for PLaSMo accesssion ID PLM_1045, version 1
Creators: BioData SynthSys, Andrew Millar, Andrew Millar
Contributor: BioData SynthSys
Data file for PLaSMo accesssion ID PLM_1045, version 1
Creators: BioData SynthSys, Andrew Millar, Andrew Millar
Contributor: BioData SynthSys
Originally submitted model file for PLaSMo accession ID PLM_1045, version 1
Creators: BioData SynthSys, Andrew Millar, Andrew Millar
Contributor: BioData SynthSys
Model type: Not specified
Model format: SBGN-ML PD
Environment: Not specified
Abstract (Expand)
Authors: A. Pokhilko, A. P. Fernandez, K. D. Edwards, M. M. Southern, K. J. Halliday, A. J. Millar
Date Published: 6th Mar 2012
Publication Type: Not specified
