P2012_AJMv2_NoABA - PLM_69, version 1

Andrew's work-in-progress P2012 version. NB KNOWN PROBLEMS do not use lightly. Derived from PLM_49, after removing ABA regulation and tidying up the SBML in COPASI. Please see version comments for IMPORTANT notes.

Comments


No parameters constrained in version 1 file.


2013-02-26 17:31:26 3 amillar2 andrew.millar@ed.ac.uk


Compiled successfully in SBSI for optimisation.


2013-02-26 17:28:18 3 amillar2 andrew.millar@ed.ac.uk

Version Comments


Version 1 is file P2012_NoSinkNoABAParamsNom38_freshCopasi.xml from 26 Feb 2013. This file should NOT be used - it has TWO ERRORS that are corrected in version 2.



A key parameter (m37) was used in two places in PLM_49v1, and was then deleted incorrectly in PLM_69 version 1. PLM_49 needs correcting first. Alexandra sent corrected files in early March (TOC1_ABA_fin), which Andrew used on 5th March.

Secondly, parameters m9, m10 are present both as global and as local to cE3n_degr, but the local m9 has a different value to the global one. Alexandra confirmed the correction on 6th March 2013.




Originally submitted to PLaSMo on 2013-02-26 17:23:01

SEEK ID: https://fairdomhub.org/assays/881

Modelling Analysis

BioData SynthSys

Projects: Millar group, PlaSMo model repository

Investigation: Millar, Andrew (ex-PlaSMo models)

Study: P2012_AJMv2_NoABA - PLM_69

Biological problem addressed: Gene Regulatory Network

Organisms: No organisms

Models:
Data:
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Andrew Millar
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Created: 10th Jan 2019 at 17:41

Last updated: 22nd Jan 2019 at 18:21

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