At_Pokh2011_LD_degr_Op1Ap3.xml - PLM_67, version 2

Andrew's "ongoing work" record for the P2011 clock model. Many different versions, with annotations made during SBSI development in 2011-2013 - see version records.

Version Comments


Version 2 is the 'public' version with the StepFunction, PLM_64v4. For some reason this was crashing SBSI, but was then cleaned up by passing through Copasi. Thus the file name of this version was Arabidopsis_clock_P2011_exCopasi.xml



This version should be suitable for SBSI optimisation to LD-LL data sets, because it was successfully tested as PLM_64v4_Steptest. NB - needs the close solver tolerances for StepFunction use!



Originally submitted to PLaSMo on 2012-05-31 22:18:27

SEEK ID: https://fairdomhub.org/assays/846

Modelling Analysis

BioData SynthSys

Projects: Millar group, PlaSMo model repository

Investigation: Millar, Andrew (ex-PlaSMo models)

Study: At_Pokh2011_LD_degr_Op1Ap3.xml - PLM_67

Biological problem addressed: Gene Regulatory Network

Organisms: No organisms

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Andrew Millar
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Created: 10th Jan 2019 at 17:40

Last updated: 22nd Jan 2019 at 18:18

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