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Disease Maps118 Covid-19 disease map - Bioinformatics analysis and computational modelling7 Independent Projects6 SysMO4 HUMET4 FAIRDOM4 COMBINE (Computational Modeling in Biology Network)4 de.NBI Systems Biology Service Center (de.NBI-SysBio)3 LiSyM - Systems Medicine of the Liver2 e:med2 German Association for Medical Informatics, Biometry and Epidemiology (GMDS)2 nfdi4health - German National Research Data Infrastructure for Personal Health Data2 C19DM-Neo4j2 ERASysAPP1 The Digital Salmon1 Druglogics1 MS_DILI1 Era CoBioTech1 FAIR Biocatalysis1 iPlacenta: ​A European Union Horizon 2020 innovative training network (ITN)1 VHP Programme1 More...

COVID-19 Disease Map118 Covid-19 Interferon pathway modelling and analysis7 FAIRDOM4 HUMET Startup4 Kinetics on the move - Workshop 20163 FAIRDOM user meeting3 ModeleXchange initiative3 SysMO DB2 LiSyM Core Infrastructure and Management (LiSyM-PD)2 COMBINE Multicellular Modelling2 INCOME2 GMDS Project Group "FAIRe Dateninfrastrukturen für die Biomedizinische Informatik"2 FAIRDOM Community Workers2 COVID-19 related studies and tools in Germany2 nfdi4health - German National Research Data Infrastructure for Personal Health Data2 C19DM-Neo4j2 SDBV/HITS2 EDITH (Ecosystem Digital Twins in Health) test project2 BaCell-SysMO1 COSMIC1 PSYSMO1 ICYSB 2015 - International Practical Course in Systems Biology1 iRhythmics1 SYSTERACT1 GenoSysFat1 DigiSal1 Early Metabolic Injury (LiSyM-EMI - Pillar I)1 Chronic Liver Disease Progression (LiSyM-DP - Pillar II)1 Regeneration and Repair in Acute-on-Chronic Liver Failure (LiSyM-ACLF - Pillar III)1 Liver Function Diagnostics (LiSyM-LiFuDi - Pillar IV)1 Model Guided Pharmacotherapy In Chronic Liver Disease (LiSyM-MGP)1 Multi-Scale Models for Personalized Liver Function Tests (LiSyM-MM-PLF)1 The Hedgehog Signalling Pathway (LiSyM-JGMMS)1 Molecular Steatosis - Imaging & Modeling (LiSyM-MSIM)1 Example use cases1 EmPowerPutida1 Colosys1 MS_DILI1 FAIRDOM & LiSyM & de.NBI Data Structuring Training1 BESTER1 EnzymeML1 Molecular characterization and angiogenic properties of extracellular vesicles in healthy and preeclamptic amniotic fluid1 SASKit: Senescence-Associated Systems diagnostics Kit for cancer and stroke1 Overexpression of microRNAs miR-25-3p, miR-185-5p and miR-132-3p in Late Onset Fetal Growth Restriction, Validation of Results and Study of the Biochemical Pathways Involved1 Comparative Proteome Profile of Placental Sub-anatomical regions1 The deregulated interplay of complement system and antioxidant activity as a driver of adverse pregnancy outcomes1 VHP project1 Implementation of Nanopore Sequencing for Detection of Treatment Induced Transcriptomic and Epitranscriptomic Changes in Leukaemic Tumour Models1 SYLOBIO1 More...

Luxembourg Centre for Systems Biomedicine (LCSB)11 University Maastricht6 Ontario Institute for Cancer Research6 University of Bonn5 Earlham Institute4 The European Bioinformatics Institute < EMBL-EBI4 Harvard Medical School4 Helmholtz Zentrum München / Institute of Experimental Genetics4 University of Heidelberg3 University of Rostock3 University of Edinburgh3 Institut Curie3 European Institute for Systems Biology and Medicine3 Gladstone Institutes3 Keio University3 University of Évry Val d'Essonne3 Oregon Health & Science University (OHSU)3 University of Nebraska-Lincoln3 NYU Grossman School of Medicine3 Pacific Northwest National Laboratory3 Elsevier3 Heidelberg Institute for Theoretical Studies (HITS gGmbH)2 Manchester Centre for Integrative Systems Biology, University of Manchester2 University of Manchester - Department of Computer Science2 Universität Konstanz2 University of Tübingen2 Kinetics on the move Workshop at HITS2 Barcelona Supercomputing Center2 Biomax Informatics AG2 University of Pittsburgh2 Fundación Progreso y Salud2 Sanofi R&D2 University of Rome Tor Vergata2 Inria Saclay - Île-de-France2 Ankara University2 CSIC Madrid1 Norwegian University of Science and Technology1 Wageningen University & Research1 European Molecular Biology Laboratory1 UNIBI: Bielefeld University1 Centro de Investigación Príncipe Felipe1 University Medical Center Hamburg - Eppendorf Hamburg1 Institut Pasteur1 University of Cambrige1 ICB Helmholtz Center Munich1 Integrative BioInformatics Inc.1 Riga Technical University1 German Center for Neurodegenerative Diseases (DZNE)1 National Institute for Infectious Diseases "L.Spallanzani"1 Systems Biology Institute (SBI)1 Institut de Recherche Saint Louis1 Uppsala University1 Helmholtz Zentrum München1 SBI University of Rostock1 Instituto de Investigación Sanitaria La Fe1 University of Applied Sciences Mittweida1 More...

Germany31 United States25 France14 United Kingdom14 Luxembourg11 Canada6 Spain6 Netherlands6 Japan4 Italy3 Türkiye2 Latvia1 Norway1 Sweden1 More...

Curation24 Systems Biology18 Data Integration15 Bioinformatics12 Computational Systems Biology12 Modelling10 Mathematical modelling8 Network Analysis7 Data analysis6 Data Management5 Molecular Biology4 Software Engineering4 Databases4 Dynamic modelling4 Modeling4 Java3 Metabolic Engineering3 SBGN3 standards3 Biocuration3 Pathway Analysis3 Biochemistry2 Genetics2 Cell biology2 Transcriptomics2 SBML2 Python2 Microarray analysis2 dynamics of biological networks2 Network Visualization2 Visualisation2 Network biology2 Data mining2 Knowledge Management2 Knowledge integration2 Publication platform2 Curation of molecular interactions2 Disease Maps2 Dynamics and Control of Biological Networks2 Constraint-based Modelling2 Parameter estimation2 Metabolic Networks2 Project Management2 Pathway Curation2 Genomics1 Proteomics1 Virology1 R1 Data analysis Mathematical modelling Bioinformatics Systems biology1 Synthetic Biology1 protein-protein interactions1 Cell physiology1 Biotechnology1 Software Architecture1 REST1 Machine Learning1 Computational modelling1 semantics1 Immunology1 Image analysis1 metabolism1 VREs1 Cloud computing1 Systems Medicine1 Systems Biology Graphical Notation1 Nutrition1 lipidomics1 Visualization1 Cancer research1 Pharmacokinetics1 Toxicology1 Agile development1 Docker1 Neuroscience1 GMP1 Pathways1 outreach1 COVID-191 Biological knowledge managament1 ODE modeling1 Human physiology1 Immersive Analytics1 Literature mining1 Molecular Maps1 Complex human disease1 Boolean Models1 Executable disease networks1 Medicine1 Drug Curation1 Editorial Committee1 Dissemination1 Funding1 Integration1 General support1 Quantitative Biology1 Physical Chemistry1 Text Mining1 Analysis1 Kinetics1 Tracer Kinetics1 Collective Behaviour1 Mechanistic Modelling1 Distributed Systems1 interoperability1 scholarly communications1 discourse analysis1 SARS-CoV 21 rare diseases1 GCP1 More...

Python10 R10 CellDesigner8 SBML7 Cytoscape6 Matlab5 Computational and theoretical biology4 SBGN4 wikipathways4 pathvisio4 Bioinformatics3 Data Management3 ODE3 Databases3 Workflows3 linux3 Computational Systems Biology3 SBGN-ED3 Genetics2 Genomics2 Java2 Web services2 Cell designer2 Ontologies2 Dynamic modelling2 Systems Biology2 Molecular biology techniques (RNA/DNA/Protein)2 Machine Learning2 semantic web2 Reactome2 cobrapy toolbox2 Knowledge Management2 Cell Collective2 ODE Modelling2 Kinetic Modeling2 Molecular Biology1 Biochemistry and protein analysis1 Transcriptomics1 Agent-based modelling1 Mathematica1 Taverna1 Ruby1 Ruby on Rails1 MIRIAM1 stimulus response experiments1 differential algebraic equations1 J2EE1 quantitative western blot analyses1 quantitative western blot analysis1 Stochastic models1 PDE1 Flux balance analysis1 network theory1 Pathway Tools1 RNAseq1 c++1 web development1 AWS1 Research Objects1 Statistics1 Data Science1 Boolean modeling1 Petri Nets1 Jupyter1 libSBML1 Metabolic modelling1 Docker1 jupyter notebooks1 Data2Dynamics1 AMICI1 PESTO1 Shell scripting1 NetworkX1 Protein2GO1 ProcessDB1 VANTED1 MetaCrop1 TEAMwISE1 NaviCell1 Literature mining1 Literature mining1 CaSQ1 GINsim1 Newt Editor1 SBGNML1 JSBML1 SBSCL1 InSilico1 Parameter estimation1 constraint programming1 model checking1 Prolog1 yEd1 bridgedb1 OmniPath1 pypath1 omics analysis1 Constraint-based analysis1 More...