SEEK ID: https://fairdomhub.org/people/2164
Location:
Germany
ORCID:
https://orcid.org/0000-0001-7253-3373
Joined: 21st Apr 2022
Expertise: Not specified
Tools: Not specified
Related items
- Programmes (1)
- Projects (4)
- Institutions (1)
- Investigations (1+1)
- Studies (2)
- Assays (5)
- Data files (7)
- SOPs (2)
Projects that do not fall under current programmes.
Projects: Manchester Institute for Biotechnology, ICYSB 2015 - International Practical Course in Systems Biology, iRhythmics, INBioPharm, EmPowerPutida, Systo models, MycoSynVac - Engineering Mycoplasma pneumoniae as a broad-spectrum animal vaccine, Multiscale modelling of state transitions in the host-microbiome-brain network, Extremophiles metabolsim, NAD COMPARTMENTATION, Agro-ecological modelling, Bergen(Ziegler lab) project AF-NADase, NAMPT affinity, Stress granules, Modelling COVID-19 epidemics, Bio-crop, ORHIZON, Coastal Data, SASKit: Senescence-Associated Systems diagnostics Kit for cancer and stroke, hybrid sequencing, HOST-PAR, BioCreative VII, Boolean modeling of Parkinson disease map, Orphan cytochrome P450 20a1 CRISPR/Cas9 mutants and neurobehavioral phenotypes in zebrafish, Selective Destruction in Ageing, Viral Metagenomic, Synthetic biology in Synechococcus for bioeconomy applications (SynEco), testproject, SDBV ephemeral data exchanges, Test project, The BeeProject, PHENET, LiceVault, EbN1 Systems Biology, UMRPégase, DeCipher, Heat stress response of the red-tide dinoflagellate Prorocentrum cordatum, middle ear, datamgmt, Institut Pasteur's projects, The nucleus of Prorocentrum cordatum, qpcr, MRC-UNICORN, Test project for Sciender, qPCR, Artificial organelles_Pathogen digestion, Supplementary Information 2 associated with the manuscript entitled " Label free Mass spectrometry proteomics reveals different pathways modulated in THP-1 cells infected with therapeutic failure and drug resistance Leishmania infantum clinical isolates", FAIR Functional Enrichment, PTPN11 mutagenesis, Supplementary Information 2 associated with the manuscript entitled "Label free Mass spectrometry proteomics reveals different pathways modulated in THP-1 cells infected with therapeutic failure and drug resistance Leishmania infantum clinical isolates", iPlacenta- Placenta on a chip, Near Surface Wave-Coherent Measurements of Temperature and Humidity, A Meta-Analysis of Functional Recovery of Aphasia after Stroke by Acupuncture Combined with Language Rehabilitation Training, Phytoplankton phenology in the Bay of Biscay: using remote sensing to assess and raise awareness of climate change impacts on the sea, Master-BIDS, Endometriosis, Vitis Data Crop, MESI-STRAT Review, Establishing an innovative and transnational feed production approach for reduced climate impact of the aquaculture sector and future food supply, ARAX: a web-based computational reasoning system for translational biomedicine, Adaptation of Salmonella enterica, I AM FRONTIER, ., PhD Nicotinic Acetylcholine Receptors, SFB1361 playground, Amaizing, Conspicuous chloroplast with LHC‒PSI/II‒supercomplex and diverse PBPs in dinoflagellate Prorocentrum cordatum, icpm-kth, Catabolic network of the gut bacteria P. vulgatus, SDBV/HITS, sample project, TestingSeek, Genomic Medicine, Remodeling of cIV, Virtual Human Platform for Safety Assessment, PROMISEANG, URGI, Matsutake, UNDESIRABLE EFFECTS OF POST COVID-19 VACCINATION: A DESCRIPTIVE STUDY, WINTER 2022, Semantic Table Interpretation in Chemistry, MS identification of L infantum proteins related to their drug resistance patterns for new drug targets identification and ecotoxicological evaluations of their environmental and interspecies impact, the Supplementary materials for paper, ToxiGen - Reproductive toxicity and transgenerational effects of petroleum mixtures in fish, PhotoBoost, Measurement of Fisheries Provisioning Services and its Pressure to Support Sustainability of Fisheries in The Jatigede Reservoir, Indonesia, FIsh data on 2022 in the Jatigede Reservoir
Web page: Not specified
Cell biological and proteogenomic study of the chloroplast of the marine, bloom-forming dinoflagellate P. cordatum
Programme: Independent Projects
Public web page: Not specified
Start date: 4th Jul 2023
End date: 31st Aug 2024
Organisms: Not specified
Programme: Independent Projects
Public web page: Not specified
Organisms: Not specified
Cells of P. cordatum adapted to growth at 20 °C and constant light:dark conditions were shifted to growth at 26 °C and 30 °C, respectively, with similar illumination conditions. During exponential and stationary growth, cells were collected for transcriptomic, proteomic and metabolomic analyses.
Programme: Independent Projects
Public web page: Not specified
Organisms: Prorocentrum cordatum
Programme: Independent Projects
Public web page: Not specified
Organisms: Aromatoleum aromaticum
Submitter: Lars Wöhlbrand
Studies: Heat stress response of Prorocentrum cordatum
Assays: Metabolite analyses, Proteomic analyses
Snapshots: Snapshot 1
Submitter: Lars Wöhlbrand
Investigation: Heat stress response of Prorcentrum cordatum
Assays: Metabolite analyses, Proteomic analyses
Snapshots: No snapshots
Submitter: Lars Wöhlbrand
Investigation: 1 hidden item
Assays: Additional data related to microscopic investigations, Additional data related to proteomic investigations, Cellular and nuclear fractions of P. cordatum analyzed by GeLC iontrap M..., Cellular and nuclear fractions of P. cordatum analyzed by timsTOF MS/MS
Snapshots: No snapshots
Submitter: Lars Wöhlbrand
Assay type: Protein Identification
Technology type: Liquid Chromatography-tandom Mass Spectrometry
Investigation: Systems biology investigation of aromatic compo...
Study: Experimental multi-OMICS
Organisms: No organisms
SOPs: SOP – Protein preparation, nanoLC-MS/MS analyse...
Data files: Detailed peptide data for identified proteins, Protein identification data
Snapshots: No snapshots
Submitter: Lars Wöhlbrand
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Heat stress response of Prorcentrum cordatum
Organisms: No organisms
SOPs: No SOPs
Data files: 2D LC MS/MS peptide analyses, Membrane protein enriched fraction, Shotgun proteomic data
Snapshots: No snapshots
Submitter: Lars Wöhlbrand
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Heat stress response of Prorcentrum cordatum
Submitter: Lars Wöhlbrand
Assay type: Protein Expression Profiling
Technology type: Liquid Chromatography-tandom Mass Spectrometry
Investigation: 1 hidden item
Organisms: No organisms
SOPs: No SOPs
Data files: GeLC ESI iontrap MS-based protein identification
Snapshots: No snapshots
Submitter: Lars Wöhlbrand
Assay type: Protein Identification
Technology type: Ion Mobility Spectrometry Mass Spectrometry
Investigation: 1 hidden item
Organisms: No organisms
SOPs: No SOPs
Data files: Shotgun proteomic data timsTOF MS/MS
Snapshots: No snapshots
Tryptic peptides of P. cordatum were separated by 2D SCX-/RP nanoLC coupled to ESI-Iontrap MS/MS.
Creators: None
Submitter: Lars Wöhlbrand
Investigations: Heat stress response of Prorcentrum cordatum
Studies: Heat stress response of Prorocentrum cordatum
Assays: Proteomic analyses
The membrane fraction of Prorcentrum cordatum was prepared and proteins solubilized using SDS. Subsequently, proteins were separated by SDS-PAGE, subjected to tryptic in-gel digest and nanoLC ESI-iontrap MS/MS.
Creators: None
Submitter: Lars Wöhlbrand
Investigations: Heat stress response of Prorcentrum cordatum
Studies: Heat stress response of Prorocentrum cordatum
Assays: Proteomic analyses
Creators: None
Submitter: Lars Wöhlbrand
Investigations: 1 hidden item
Prepared (sub-)cellular fractions were separated by gradient SDS-PAGE and entire sample lanes cut into pieces prior to in-gel digest and nanoLC separation coulpled to iontrap MS/MS detection.
Creators: None
Submitter: Lars Wöhlbrand
Investigations: 1 hidden item
Creators: None
Submitter: Lars Wöhlbrand
Investigations: Systems biology investigation of aromatic compo...
Studies: Experimental multi-OMICS
Assays: Proteomic data
Creators: None
Submitter: Lars Wöhlbrand
Investigations: Systems biology investigation of aromatic compo...
Studies: Experimental multi-OMICS
Assays: Proteomic data
Prorocentrum cordatum was subjected to whole cell shotgun analyses (in-solution digest) unsing nanoLC ESI-intrap MS/MS
Creators: None
Submitter: Lars Wöhlbrand
Investigations: Heat stress response of Prorcentrum cordatum
Studies: Heat stress response of Prorocentrum cordatum
Assays: Proteomic analyses
Detailed description of the methods applied for proteomic analyses of P. cordatum heat stress response
Creator: Lars Wöhlbrand
Submitter: Lars Wöhlbrand
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creator: Lars Wöhlbrand
Submitter: Lars Wöhlbrand
Investigations: Systems biology investigation of aromatic compo...
Studies: Experimental multi-OMICS
Assays: Proteomic data