Heat stress response of Prorcentrum cordatum

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DOI: 10.15490/fairdomhub.1.investigation.565.1

Zenodo URL: None

Created at: 18th Oct 2023 at 07:06

Contents

Heat stress response of Prorocentrum cordatum

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Proteomic analyses

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2D LC MS/MS peptide analyses

Tryptic peptides of P. cordatum were separated by 2D SCX-/RP nanoLC coupled to ESI-Iontrap MS/MS.

  • 2D_LC peptide data.rar

Membrane protein enriched fraction

The membrane fraction of Prorcentrum cordatum was prepared and proteins solubilized using SDS. Subsequently, proteins were separated by SDS-PAGE, subjected to tryptic in-gel digest and nanoLC ESI-iontrap MS/MS.

  • Membrane fraction peptide data.rar

Shotgun proteomic data

Prorocentrum cordatum was subjected to whole cell shotgun analyses (in-solution digest) unsing nanoLC ESI-intrap MS/MS

  • Shotgun peptide data.rar

Metabolite analyses

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GCMS metabolite data

Pure cultures of P. cordatum were grown at 20°C, 26°C and 30°C until exponential and stationary growth phase and were harvested for metabolite extraction.

Online metabolite derivatization was performed using a Gerstel MPS2 autosampler (Muehlheim, Germany). Dried metabolites were dissolved in 15 µl of 2 % methoxyamine hydrochloride in pyridine at 40 °C under shaking. After 90 min, an equal volume of N-Methyl-N-(trimethylsilyl)trifluoroacetamide (MSTFA) was added and held for 30 min at 40 °C. One
...

  • Heat stress_GCMS_data.zip
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Citation
Wöhlbrand, L. (2023). Heat stress response of Prorcentrum cordatum. FAIRDOMHub. https://doi.org/10.15490/FAIRDOMHUB.1.INVESTIGATION.565.1
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Created: 18th Oct 2023 at 07:06

Last updated: 18th Oct 2023 at 07:07

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