Proteogenomic analyses of Desulfobacteraceae members
DownloadThe family of Desulfobacteraceae comprises mtabolically versatile, completely oxidizing, sulfate-reducing bacteria that play an important role in the global carbon- and sulfor-cycles, mainly in the marine realm. In this study, six different species of Desulfobacteraceae were studied by comparative proteogenomics, i.e. Desulfobacula toluolica Tol2, Desulfococcus multivorans 1be1, Desulfonema limicola, Desulfonema magnum, Desulfosarcina variabilis 3be13 and Desulfobacterium autotrophicum HRM2.
DOI: 10.15490/fairdomhub.1.investigation.666.1
Zenodo URL: None
Created at: 29th Oct 2024 at 12:46
Proteogenomic analyses of Desulofbacteraceae members
No description specified
Shotgun proteomics of Desulfobacteraceae members
The soluble protein fraction was subjected to shotgun proteomics (i..e. in-solution digest) applying nanoLC ESI-Iontrap MS/MS and only detections in at least two replicates per condition and bacterium were considered for subsequent analyses. Correspondingly peptide count data was compiled per condition and strain studied.
Shotgun proteomics data of Desulfobacula toluolica Tol2
No description specified
- Db_toluolica_Soluble_fraction.xlsx
Shotgun proteomics data of Desulfococcus multivorans 1be1
No description specified
- Dc_multivorans_Soluble_fraction.xlsx
Shotgun proteomics data of Desulfonema limicola
No description specified
- Dn_limicola_Soluble_fraction.xlsx
Shotgun proteomics data of Desulfonema magnum
No description specified
- Dn_magnum_Soluble_fraction.xlsx
Shotgun proteomics data of Desulfosarcina variabilis 3be13
No description specified
- Ds_variabilis_Soluble_fraction.xlsx
Shotgun proteomics data of Desulfobacterium autotrophicum HRM2
No description specified
- Dt_autotrophicum_Soluble_fraction.xlsx
Membrane protein-enriched fraction proteomics of Desulfobacteraceae members
No description specified
Membrane protein-enriched fraction proteomics of Desulfobacula toluolica Tol2
No description specified
- Db_toluolica_Membrane_fraction.xlsx
Membrane protein-enriched fraction proteomics of Desulfococcus multivorans 1be1
No description specified
- Dc_multivorans_Membrane_fraction.xlsx
Membrane protein-enriched fraction proteomics of Desulfonema limicola
No description specified
- Dn_limicola_Membrane_fraction.xlsx
Membrane protein-enriched fraction proteomics of Desulfonema magnum
No description specified
- Dn_magnum_Membrane_fraction.xlsx
Membrane protein-enriched fraction proteomics of Desulfosarcina variabilis 3be13
No description specified
- Ds_variabilis_Membrane_fraction.xlsx
Membrane protein-enriched fraction proteomics of Desulfobacterium autotrophicum HRM2
No description specified
- Dt_autotrophicum_Membrane_fraction.xlsx
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Created: 29th Oct 2024 at 12:46
Last updated: 29th Oct 2024 at 12:46
