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SysMO14
Independent Projects12
Disease Maps5
de.NBI Systems Biology Service Center (de.NBI-SysBio)4
Era CoBioTech4
DFG founded projects4
ERASysAPP3
e:med3
LiSyM - Systems Medicine of the Liver2
German Association for Medical Informatics, Biometry and Epidemiology (GMDS)2
The Digital Salmon1
HUMET1
NIBSys1
FAIRDOM1
Model repository for M4 (Make Me My Model) clients of ISBE1
COMBINE (Computational Modeling in Biology Network)1
BlueBio ERA-NET COFUND1
nfdi4health - German National Research Data Infrastructure for Personal Health Data1
iPlacenta: A European Union Horizon 2020 innovative training network (ITN)1
EU Projects1
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Project
COSMIC7
SysMO-LAB6
iRhythmics5
COVID-19 Disease Map5
SASKit: Senescence-Associated Systems diagnostics Kit for cancer and stroke5
Kinetics on the move - Workshop 20164
OLCIR: Optimization of Lung Cancer Therapy with Ionizing Radiation4
SCyCode The Autotrophy-Heterotrophy Switch in Cyanobacteria: Coherent Decision-Making at Multiple Regulatory Layers4
BaCell-SysMO3
Example use cases3
INCOME3
BESTER3
SYLOBIO3
SYSTERACT2
de.NBI-SysBio2
FAIRDOM & LiSyM & de.NBI Data Structuring Training2
Sustainable co-production2
GMDS Project Group "FAIRe Dateninfrastrukturen für die Biomedizinische Informatik"2
Implementation of Nanopore Sequencing for Detection of Treatment Induced Transcriptomic and Epitranscriptomic Changes in Leukaemic Tumour Models2
SysMO DB1
FAIRDOM1
ICYSB 2015 - International Practical Course in Systems Biology1
GenoSysFat1
ZucAt1
Early Metabolic Injury (LiSyM-EMI - Pillar I)1
Chronic Liver Disease Progression (LiSyM-DP - Pillar II)1
Regeneration and Repair in Acute-on-Chronic Liver Failure (LiSyM-ACLF - Pillar III)1
LiSyM Core Infrastructure and Management (LiSyM-PD)1
Liver Function Diagnostics (LiSyM-LiFuDi - Pillar IV)1
Model Guided Pharmacotherapy In Chronic Liver Disease (LiSyM-MGP)1
Multi-Scale Models for Personalized Liver Function Tests (LiSyM-MM-PLF)1
The Hedgehog Signalling Pathway (LiSyM-JGMMS)1
Molecular Steatosis - Imaging & Modeling (LiSyM-MSIM)1
FAIRDOM user meeting1
ErasysApp Funders1
HUMET Startup1
Service to URV Tarragona, Spain with respect to their Safety Assessment of Endocrine Disrupting Chemicals model (Active NOW)1
EraCoBiotech 2 nd call proposal preparation1
COMBINE Multicellular Modelling1
MESI-STRAT1
Multiscale modelling of state transitions in the host-microbiome-brain network1
HOTSOLUTE1
TRALAMINOL1
Extremophiles metabolsim1
INDIE - Biotechnological production of sustainable indole1
PoLiMeR - Polymers in the Liver: Metabolism and Regulation1
NAD COMPARTMENTATION1
Stress granules1
FAIRDOM Community Workers1
Mechanism based modeling viral disease ( COVID-19 ) dynamics in human population1
COVID-19 related studies and tools in Germany1
AquaHealth (ERA-BlueBio)1
nfdi4health - German National Research Data Infrastructure for Personal Health Data1
Modelling COVID-19 epidemics1
SNAPPER: Synergistic Neurotoxicology APP for Environmental Regulation1
Molecular characterization and angiogenic properties of extracellular vesicles in healthy and preeclamptic amniotic fluid1
CC-TOP1
BioCreative VII1
Overexpression of microRNAs miR-25-3p, miR-185-5p and miR-132-3p in Late Onset Fetal Growth Restriction, Validation of Results and Study of the Biochemical Pathways Involved1
Comparative Proteome Profile of Placental Sub-anatomical regions1
The deregulated interplay of complement system and antioxidant activity as a driver of adverse pregnancy outcomes1
MESI-STRAT Review1
SDBV/HITS1
MESI-Review 20241
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Institution
University of Rostock35
Heidelberg Institute for Theoretical Studies2
Norwegian University of Science and Technology1
University of Greifswald1
FAIRDOM User meeting1
University Medicine of Greifswald1
University of Innsbruck1
SBI University of Rostock1
Instituto de Investigación Sanitaria La Fe1
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Expertise
Microbiology4
Data Management4
Systems Biology4
Molecular Biology3
Mathematical modelling3
Transcriptomics3
dynamics of biological networks3
Molecular microbiology3
Dynamics and Control of Biological Networks3
Data Integration3
Genetics2
Bioinformatics2
Databases2
Streptococcus pyogenes2
Curation2
Parameter estimation2
Biochemistry1
Bacillus subtilis1
Information Retrieval1
Physics1
Mathematics1
Deterministic modelling of gene regulation networks1
Data analysis
Mathematical modelling
Bioinformatics
Systems biology1
Computational Systems Biology1
Lactococcus1
bistability1
stress responses1
sensitivity analysis1
Data analysis1
Statistical Physics1
Metabolic Engineering1
Bacterial metabolism | Metabolic engineering1
Biotechnology1
Microbiology/Anaerobic Bacteria/Clostridia
Molecular Physiology
Stress responses1
genome-scale modeling1
Machine Learning1
Genetic regulation1
Kinetic modelling1
model management1
standards1
semantics1
metabolic systems biology1
RNA-Seq1
Medical informatics1
Semantic Enrichment1
Provenance1
AI1
Deep Learning1
Ontology1
Metabolic Networks1
Data Modelling1
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Tool
Matlab5
Computational and theoretical biology4
ODE4
Genetic modification3
Stochastic models3
Genetics2
Molecular Biology2
Biochemistry and protein analysis2
Transcriptomics2
SBML2
Databases2
Mathematica2
R2
Cytoscape2
differential algebraic equations2
Computational Systems Biology2
Dynamic modelling2
Molecular biology techniques (RNA/DNA/Protein)2
Neo4J2
COBRA toolbox2
Microbiology1
Biochemistry1
Data Management1
Cell and tissue culture1
Metabolomics1
Java1
Python1
Copasi1
Fermentation1
Microarray analysis1
Chip-chip1
Ontologies1
linux1
stimulus response experiments1
data modeling1
Proteomics (2D-PAGE)1
quantitative western blot analyses1
quantitative western blot analysis1
C programming1
MySQL1
Deterministic models1
BioMart1
DNA technology RNA technology Protein analysis Fermentation Mutagenesis1
Gaschromatographic analysis1
Chemostat cultures
Molecular biology techniques (RNA/DNA)
2-D Gel electrophoresis
Gaschromatography
Protein overexpression/purification1
RightField1
SED-ML1
graphdatabase1
Protege1
Galaxy1
Data Integration1
Data Modelling1
SEEK1
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35
People found
Projects: COSMIC
Institutions: University of Rostock
Projects: de.NBI-SysBio, GenoSysFat, Kinetics on the move - Workshop 2016, Example use cases, COMBINE Multicellular Modelling, GMDS Project Group "FAIRe Dateninfrastrukturen für die Biomedizinische Informatik", COVID-19 related studies and tools in Germany, nfdi4health - German National Research Data Infrastructure for Personal Health Data
Institutions: University of Rostock, University of Greifswald, University Medicine of Greifswald
https://orcid.org/0000-0002-5886-5563
I am a computer scientist by training with a specialisation on database and information systems. Since December 2018 I am professor of Medical Informatics at the University Medicine in Greifswald, Germany, at the Institute of Community Medicine. My lab focuses on research data management in biomedicine, data integration across health care providers, and provenance of clinical research data items within clinical information systems. Furthermore, I am actively involved in COMBINE standardisation ...
Projects: COSMIC, BaCell-SysMO, SYSTERACT, HUMET Startup, INCOME, BESTER, iRhythmics, COVID-19 Disease Map, SASKit: Senescence-Associated Systems diagnostics Kit for cancer and stroke, Implementation of Nanopore Sequencing for Detection of Treatment Induced Transcriptomic and Epitranscriptomic Changes in Leukaemic Tumour Models
Institutions: University of Rostock
Projects: SysMO-LAB
Institutions: University of Rostock
