ExploreFBA result of flux distribution in butanol producing e.coli strain, which designed using RobOKoD.
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iNS142_ko_biomass_fba_results_excel.xlsx
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Created: 3rd Jun 2015 at 13:50
Last updated: 8th Dec 2015 at 15:05
Last used: 16th Oct 2019 at 12:41
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Projects: SysMO DB, Whole body modelling of glucose metabolism in malaria patients, Manchester Institute for Biotechnology, FAIRDOM, ICYSB 2015 - International Practical Course in Systems Biology, GenoSysFat, DigiSal, FAIRDOM user meeting, FAIRDOM Templates
Institutions: School of Computer Science, University of Manchester, Manchester Centre for Integrative Systems Biology, University of Manchester
https://orcid.org/0000-0003-4958-0184
Interested in systems + synthetic biology, biotechnology, mountaineering, swimming, running, and the occasional cup of tea. Once diagnosed as an ENFP.
Programme: Independent Projects
Public web page: Not specified
RobOKoD algorithm was, designed then implemented as part of a study in RobOKoD: microbial strain design for (over)production of target compounds. (http://fairdomhub.org/publications/236). It was used to generate a strain of e.coli for producing butanol, that was then compared to an experimental strain. It was shown to perform better than similar methods (OptKnock, and RobustKnock).
Contributor: Natalie Stanford
Biological problem addressed: Model Analysis Type
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Abstract (Expand)
Authors: Natalie Stanford, P. Millard, N. Swainston
Date Published: 24th Mar 2015
Journal: Front Cell Dev Biol
