R-script for scRNA-Seq analysis of in vivo "induced sinoatrial bodies" and ex vivo sinoatrial node region (Goodyer et al.)
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This file contains the script for the downstream scRNA-Seq analysis including quality control using the barcode ranking method together with the tool DropletUtils to exclude empty droplets and undetected genes as well as standard data processing (normalisation, variable feature identification, scaling, and dimensionality reduction) using tools of Seurat (v.3.2.2). After cluster annotation the %mtDNA was plotted for both datasets.

SEEK ID: https://fairdomhub.org/sops/486?version=1

Filename: mitochondrial RNA.R  Download

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Views: 271   Downloads: 15

Created: 10th May 2021 at 08:34

Last updated: 10th May 2021 at 10:52

Last used: 17th May 2022 at 17:29

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Version 1 Created 10th May 2021 at 08:34 by Anne-Marie Galow

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