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Created: 4th Nov 2010 at 13:41
Last updated: 5th Dec 2016 at 12:21
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Version 1 (earliest) Created 4th Nov 2010 at 13:41 by Jay Moore
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Projects: SCaRAB, STREAM, SYSTERACT, INBioPharm
Institutions: SINTEF, Norwegian University of Science and Technology
Expertise: Bioinformatics, Microarray analysis, Data analysis, Pseudomonas, Streptomyces, Stoichiometric modelling, Prokaryotic genetics, Analytical chemistry
Tools: Transcriptomics, Perl, Fermentation, GC and LC analysis of metabolites, Pathway Tools, MS imaging, Mass spectrometry (LC-MS/MS), Mass spectrometry, FT-ICR-MS, Field Flow Fractionation
Senior Research Scientist at SINTEF, Dept. of Biotechnology and Nanomedicine, Research Group Mass Spectrometry
Projects: STREAM, SCaRAB, WineSys, INBioPharm
Institutions: SINTEF, Norwegian University of Science and Technology
Expertise: Metabolomics
Projects: STREAM, SCaRAB, INBioPharm, SYSTERACT
Institutions: SINTEF
Projects: STREAM
Institutions: University of Warwick
Systems Biologist specialising in data integration, high-throughput sequence analysis, and evolutionary and comparative analyses.
Projects: STREAM, SYSTERACT, INBioPharm, BioZEment 2.0, OXYMOD, BESTER, AquaHealth (ERA-BlueBio)
Institutions: SINTEF
https://orcid.org/0000-0002-9420-1959SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB, SysMO Funders, SilicoTryp, Noisy-Strep
Web page: http://sysmo.net/
Global metabolic switching in Streptomyces coelicolor
Antibiotics are made during the second phase of growth when there is a transition in metabolism from primary to secondary metabolism. Primary metabolism is growth related and involves all the normal cellular activities associated with cell growth and division. Whereas secondary metabolism is non-growth linked and is non-essential but many important activities occur during this phase which help the bacterium survive.
Programme: SysMO
Public web page: Not specified
Organisms: Streptomyces coelicolor
All creators
Antibiotics are made during the second phase of growth when there is a transition in metabolism from primary to secondary metabolism. Primary metabolism is growth related and involves all the normal cellular activities associated with cell growth and division. Whereas secondary metabolism is non-growth linked and is non-essential but many important activities occur during this phase which help the bacterium survive.
One of these activities is antibiotic production and is widespread in streptomycetes ...
Submitter: Jay Moore
Studies: ScoCyc metabolic pathway curation, Timeseries 1
Assays: Metabolic pathway curation, Online/offline measurements, metabolomics, proteomics, transcriptomics
Snapshots: No snapshots
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Genotype: Wildtype (M145E) Medium: Phosphate-limited (F134)
Submitter: Jay Moore
Investigation: Metabolism of Streptomyces coelicolor (SysMO ST...
Assays: Online/offline measurements, metabolomics, proteomics, transcriptomics
Snapshots: No snapshots
Submitter: Jay Moore
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Metabolism of Streptomyces coelicolor (SysMO ST...
Study: Timeseries 1
Organisms: Streptomyces coelicolor : M145 (wild-type / wild-type)
SOPs: Cell dry weight (CDW) determination of Streptom..., Contamination test of Streptomyces coelicolor c..., Generation of cell material from Streptomyces c..., Generation of cell material from Streptomyces c..., Generation of cell material from Streptomyces c..., Preparation of inoculum for Streptomyces coelic..., Sampling from Streptomyces coelicolor culture f... and 1 hidden item
Data files: Fermentor 199 cultivation data
Snapshots: No snapshots