B cell_Parametric ODE Equations

Version 1

Biochemical Reaction Networks: Biochemical Reaction Networks transform static protein-protein interactions (PPI) network into dynamic, mechanistic models by decomposing each interaction into underlying molecular events like phosphorylation and complex formation. Using SPADAN toolbox (DOI:10.1093/bioinformatics/btad079), we expands PPI network into biochemical reactions network.

Ordinary Differential Equation Model Equations: Kinetic descriptions of biochemical reactions related to each renal cell type are automatically generated using the SPADAN toolbox (DOI:10.1093/bioinformatics/btad079). For each reaction, rate equations follow the mass action law, producing a system of ODEs that captures temporal dynamics.