Technology type 'Next generation sequencing'

Sequencing
Current technology type

Next generation sequencing
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PacBio RS II (0) | Illumina HiSeq (0)

Related assays

8 Assays visible to you, out of a total of 17

RNA sequencing:l-fuc/d-glu

SulfoSys - Biotec

No description specified

Submitter: Theresa Kouril

Assay type: RNA-seq Profiling

Technology type: Next generation sequencing

Investigation: L-fucose degradation in Sulfolobus solfataricus P2

Study: Comparison of S. solfataricus grown on l-fucose...

Organisms: Sulfolobus solfataricus (batch)

SOPs: SulfoSYS_BIOTECH: RNA isolation and sequencing

Data files: Transcriptomics L-fuc vs D-glc

Snapshots: No snapshots

Created: 17th Dec 2014 at 14:08, Last updated: 8th Nov 2017 at 15:21

Feed switch 2015-09, 2016-01 Solbergstranda, gut microbiota composition, 16S rRNA metagenomics

GenoSysFat

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16S rRNA amplicon sequencing (Illumina MiSeq, V3-V4 region) to assess community structure.

Submitter: Jon Olav Vik

Assay type: Experimental Assay Type

Technology type: Next generation sequencing

Investigation: Omega-3 metabolism of salmon in relation to die...

Study: GSF1: Salmon feed-switch experiment vegetable a...

Organisms: Salmo salar

SOPs: 16S metagenomic sequencing library preparations, DNA extraction from intestinal samples

Data files: Combined taxonomy table from freshwater and sal..., Feed switch 2015-09 Solbergstranda FASTA for gu..., Feed switch 2015-09 Solbergstranda gut microbio..., Feed switch 2016-01 Solbergstranda FASTA for gu..., Feed switch 2016-01 Solbergstranda gut microbio...

Snapshots: No snapshots

Created: 5th Feb 2016 at 13:35, Last updated: 20th Aug 2021 at 12:18

Feed switch 2015-09, 2016-01 Solbergstranda, gross phenotypes

GenoSysFat

Record of weight, length and sex of fish sampled after feed switch between vegetable and marine oil, in September 2015 (freshwater) and January 2016 (seawater). Young fry arrived at Solbergstranda 2015-02-05 17:20.

Submitter: Thomas Harvey

Assay type: Experimental Assay Type

Technology type: Next generation sequencing

Investigation: Omega-3 metabolism of salmon in relation to die...

Study: GSF1: Salmon feed-switch experiment vegetable a...

Organisms: Salmo salar

SOPs: Schedule for transition to seawater in GSF1, Ge...

Data files: Description of feeds for crossover feeding tria..., Feed switch 2015-09, 2016-01 Solbergstranda gro..., Metabolomics sampleID Old to New

Snapshots: No snapshots

Created: 2nd Jun 2016 at 15:17, Last updated: 20th Aug 2021 at 12:20

Whole genome sequencing (Illumina)

Noisy-Strep

No description specified

Submitter: Jan-Willem Veening

Assay type: Experimental Assay Type

Technology type: Next generation sequencing

Investigation: Chromosome segregation and cell division in Str...

Study: Genome wide marker frequency analysis on new st...

Organisms: No organisms

SOPs: No SOPs

Data files: DCI15, MK453, MK454, Whole genome marker frequency analysis on strai..., Whole genome marker frequency analysis on strai..., Whole genome marker frequency analysis on strai...

Snapshots: No snapshots

Created: 19th Jul 2016 at 10:33, Last updated: 8th Nov 2017 at 15:21

sRNAomics (sRNA-Seq)

MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection

No description specified

Submitter: Ziva Ramsak

Assay type: MicroRNA Profiling

Technology type: Next generation sequencing

Investigation: MOA - Multiomics analysis of potato response to...

Study: MOA2010-05

Organisms: Solanum tuberosum, Potato virus Y

SOPs: No SOPs

Snapshots: No snapshots

Created: 18th Feb 2019 at 19:54, Last updated: 4th Mar 2019 at 17:51

Degradomics

MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection

No description specified

Submitter: Ziva Ramsak

Assay type: Degradome-Seq

Technology type: Next generation sequencing

Investigation: MOA - Multiomics analysis of potato response to...

Study: MOA2010-05

Organisms: Solanum tuberosum, Potato virus Y

SOPs: No SOPs

Data files: MOA2010-05_4_degradomics_Degradome-Seq_GEO, MOA2010-05_4_degradomics_Degradome-Seq_targets-..., MOA2010-05_4_degradomics_Degradome-Seq_targets-..., MOA_Multiomics-Analysis_Phenodata-n-MIAPPE

Snapshots: No snapshots

Created: 18th Feb 2019 at 19:58, Last updated: 4th Mar 2019 at 17:51

Liver RNA-seq data for in vivo VII

Systems toxicology of Atlantic cod

RNA-seq data for In vivo 7 samples. Only 32 RNA samples from liver of male fish sequenced. Illumina poly(A)-RNA sequencing at UiB GCF, as in Yadetie et al., 2018.

Submitter: Fekadu Yadetie

Assay type: RNA-seq

Technology type: Next generation sequencing

Investigation: 1 hidden item

Study: 1 hidden item

Organisms: Gadus morhua

SOPs: No SOPs

Data files: 3 hidden items

Snapshots: No snapshots

Created: 5th Dec 2019 at 21:34, Last updated: 6th Dec 2019 at 13:25

RNA-seq data for BaP and EE2 treated PCLS

Systems toxicology of Atlantic cod