MOA2010-05_3_sRNAomics_sRNA-Seq_R-code Version 1
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R code for differential expression analysis of sRNA-Seq.
SEEK ID: https://fairdomhub.org/data_files/2972?version=1
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MOA2010-05_3_sRNAomics_sRNA-Seq_R-code.r
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Created: 4th Jul 2019 at 16:09
Last used: 21st Jul 2019 at 18:00
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https://orcid.org/0000-0003-0913-2715
Time series response of potato cv. Désirée, which is tolerant to PVY infection, was analysed in both inoculated as well as upper non-inoculated leaves. Additionally, transgenic plants deficient in accumulation of salicylic acid (NahG- Désirée) were studied in the same setting.
This investigation is published under the CC BY 4.0 license.
Programme: NIBSys
Public web page: Not specified
Time series response of potato cv. Désirée, which is tolerant to PVY infection, was analysed in both inoculated as well as upper non-inoculated leaves. Additionally, transgenic plants deficient in accumulation of salicylic acid (NahG- Désirée) were studied in the same setting.
All the files available are published under the CC BY 4.0 license.
Snapshots: Snapshot 1, Snapshot 2, Snapshot 3
Symptoms obsevation, photosynthetic, pathogen (qPCR), transcriptomics (qPCR, microarrays, Degradome-Seq) and proteomics (MS) measurements.
Person responsible: Ziva Ramsak
Snapshots: No snapshots
Contributor: Ziva Ramsak
Assay type: MicroRNA Profiling
Technology type: Next generation sequencing
Snapshots: No snapshots
