To map genome wide transcriptome responses in Atlantic cod PCLS treated with BaP and EE2. See Yadetie et al., 2018.
SEEK ID: https://fairdomhub.org/studies/697
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Projects: Systems toxicology of Atlantic cod
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Experimentalists: Fekadu Yadetie
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The goal of the dCod-project is to combine the competencies in environmental toxicology, biology, bioinformatics and mathematics across the traditional department boundaries, to create a deeper understanding of cods' adaptations and reactions to stressors in the environment. Building on the thoroughly studies and mapping of the cod genome at UiO and the long research traditions on cod at the Department of Biology at UiB, the dCod project will expand our knowledge with methods based on genomics; ...
Projects: Systems toxicology of Atlantic cod
Web page: http://dcod.no
Coastal zones and oceans constitute an essential fundament for Norway’s history as well as current economy, providing ecosystem services for fisheries, aquaculture, transport, tourism, and recreation. The petroleum activities in Norwegian waters have been crucial for Norway’s financial growth and in financing the Norwegian welfare state. As the pressure on the oceans continuously increases, both the petroleum industry and the seafood industries have acknowledged that awareness and actions are ...
Programme: dCod 1.0: decoding systems toxicology of cod
Public web page: http://www.uib.no/en/dcod
Organisms: Gadus morhua
Submitter: Fekadu Yadetie
Assay type: RNA-seq
Technology type: Next generation sequencing
Investigation: 1 hidden item
Organisms: Gadus morhua
SOPs: No SOPs
Data files: PCLS_BaP-EE2_RNAseq - analysis, PCLS_BaP-EE2_RNAseq - reads, RNA-seq metadata for BaP and EE2 treated PCLS s...
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Creator: Fekadu Yadetie
Submitter: Fekadu Yadetie
Investigations: 1 hidden item
Creator: Fekadu Yadetie
Submitter: Fekadu Yadetie
Investigations: 1 hidden item
Creator: Fekadu Yadetie
Submitter: Fekadu Yadetie
Investigations: 1 hidden item
Abstract (Expand)
Authors: F. Yadetie, X. Zhang, E. M. Hanna, L. Aranguren-Abadia, M. Eide, N. Blaser, M. Brun, I. Jonassen, A. Goksoyr, O. A. Karlsen
Date Published: 22nd Jun 2018
Publication Type: Not specified
PubMed ID: 29929084
Citation: Aquat Toxicol. 2018 Aug;201:174-186. doi: 10.1016/j.aquatox.2018.06.003. Epub 2018 Jun 7.