SEEK ID: https://fairdomhub.org/people/1260
Location: Norway
ORCID: Not specified
Joined: 24th Jan 2019
Expertise: Not specified
Tools: Not specified
Related items
The goal of the dCod-project is to combine the competencies in environmental toxicology, biology, bioinformatics and mathematics across the traditional department boundaries, to create a deeper understanding of cods' adaptations and reactions to stressors in the environment. Building on the thoroughly studies and mapping of the cod genome at UiO and the long research traditions on cod at the Department of Biology at UiB, the dCod project will expand our knowledge with methods based on genomics; ...
Projects: Systems toxicology of Atlantic cod
Web page: http://dcod.no
Coastal zones and oceans constitute an essential fundament for Norway’s history as well as current economy, providing ecosystem services for fisheries, aquaculture, transport, tourism, and recreation. The petroleum activities in Norwegian waters have been crucial for Norway’s financial growth and in financing the Norwegian welfare state. As the pressure on the oceans continuously increases, both the petroleum industry and the seafood industries have acknowledged that awareness and actions are ...
Programme: dCod 1.0: decoding systems toxicology of cod
Public web page: http://www.uib.no/en/dcod
Organisms: Gadus morhua
Submitter: Xiaokang Zhang
Biological problem addressed: Metabolic Network
Investigation: 1 hidden item
Study: 1 hidden item
Organisms: Gadus morhua
Models: Draft metabolic reconstruction model of Atlanti..., Draft metabolic reconstruction model of Atlanti..., Draft metabolic reconstruction model of Atlanti...
SOPs: No SOPs
Data files: Draft metabolic reconstruction model of Atlanti..., Draft metabolic reconstruction model of Atlanti..., Draft metabolic reconstruction model of Atlanti..., Visualization of gap filling of subsystem "Meta...
Snapshots: Snapshot 1, Snapshot 2
COBRA Matlab toolbox was used.
Creators: Xiaokang Zhang, Eileen Marie Hanna
Submitter: Xiaokang Zhang
Investigations: 1 hidden item
Studies: 1 hidden item
This is an auto-generated model with COBRA Matlab toolbox. This model was deposited in BioModels [1] and assigned the identifier MODEL2010090003.
[1] Malik-Sheriff et al. BioModels — 15 years of sharing computational models in life science. Nucleic Acids Research. 2020 Jan, 48(D1):D407–415
Creators: Xiaokang Zhang, Eileen Marie Hanna, Marta Eide, Shirin Fallahi, Fekadu Yadetie, Anders Goksøyr, Inge Jonassen, Tomasz Furmanek; Daniel Craig Zielinski
Submitter: Xiaokang Zhang
Model type: Metabolic network
Model format: SBML
Environment: Matlab
This is an auto-generated model with COBRA Matlab toolbox. This model was deposited in BioModels [1] and assigned the identifier MODEL2010090002.
[1] Malik-Sheriff et al. BioModels — 15 years of sharing computational models in life science. Nucleic Acids Research. 2020 Jan, 48(D1):D407–415
Creators: Xiaokang Zhang, Eileen Marie Hanna, Marta Eide, Shirin Fallahi, Fekadu Yadetie, Anders Goksøyr, Inge Jonassen, Tomasz Furmanek; Daniel Craig Zielinski
Submitter: Xiaokang Zhang
Model type: Metabolic network
Model format: SBML
Environment: Matlab
This is an auto-generated model with COBRA Matlab toolbox. This model was deposited in BioModels [1] and assigned the identifier MODEL2010090001.
[1] Malik-Sheriff et al. BioModels — 15 years of sharing computational models in life science. Nucleic Acids Research. 2020 Jan, 48(D1):D407–415
Creators: Xiaokang Zhang, Eileen Marie Hanna, Marta Eide, Shirin Fallahi, Fekadu Yadetie, Anders Goksøyr, Inge Jonassen, Tomasz Furmanek; Daniel Craig Zielinski
Submitter: Xiaokang Zhang
Model type: Metabolic network
Model format: SBML
Environment: Matlab
Abstract (Expand)
Authors: Eileen Marie Hanna, Xiaokang Zhang, Marta Eide, Shirin Fallahi, Tomasz Furmanek, Fekadu Yadetie, Daniel Craig Zielinski, Anders Goksøyr, Inge Jonassen
Date Published: 26th Nov 2020
Publication Type: Journal
DOI: 10.3389/fmolb.2020.591406
Citation: Front. Mol. Biosci. 7,591406
Abstract (Expand)
Authors: F. Yadetie, X. Zhang, E. M. Hanna, L. Aranguren-Abadia, M. Eide, N. Blaser, M. Brun, I. Jonassen, A. Goksoyr, O. A. Karlsen
Date Published: 22nd Jun 2018
Publication Type: Not specified
PubMed ID: 29929084
Citation: Aquat Toxicol. 2018 Aug;201:174-186. doi: 10.1016/j.aquatox.2018.06.003. Epub 2018 Jun 7.