Projects: FAIRDOM
Institutions: ETH Zurich & Basel / The Scientific IT Services (SIS) division
Disciplines: Not specified
Roles: Not specified
Expertise: Software Engineering, Scientific Computing, Databases, distributed systems
Tools: High Performance Computing, Statistics, SQL, Java, Python
Head of Scientific IT Services and member of the ITS executive board at ETH Zurich.
Project manager of SyBIT.
Project partner of the FAIRDOM Initiative.
Projects: TRANSLUCENT
Institutions: Humboldt-Universität zu Berlin
Roles: Not specified
Expertise: Data Management, Bioinformatics
I created this for all SysMo Modellers
http://www.semanticsbml.org/aym Annotate Your Model
There you can annotate your non SBML models with biological terms (MIRIAM annotations). As a cool extra you can view you model source code with inserted biological infomation.
Together with this http://www.semanticsbml.org/semanticSBML
you can serach for similar BioModels. The similarity search is based on MIRIAM annotations that are attached to you model. AYM also allows you to create annotations without
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Projects: SysMO-LAB
Institutions: Wageningen University & Research
Disciplines: Modeller
Roles: Not specified
Expertise: Reactor models, dynamics of biological networks., Mathematical modelling, Bioinformatics
Tools: SQL, Material balance based modeling, Mathematica, Matlab, Copasi, JWS Online, Algebraic equations, Linear equations, ODE, Partial differential equations, SBML, Metabolomics, Model organisms, Cell biology, Computational and theoretical biology, Molecular Biology
I'm a modeller, specialized in kinetic modeling of biochemical networks. My focus in the SysMO-LAB consortium is on creating models of Lactococcus lactis glycolysis and couple this to other related lactic acid bacteria like Streptococcus pyogenes and Enterococcus faecalis. Besides kinetic modeling, I'm also interested in combining various modeling techniques (genome-scale modeling, qualitative modeling).
Projects: MOSES
Institutions: Medical University Vienna
Disciplines: Not specified
Roles: Not specified
Expertise: Bioinformatics
Tools: PHP, SQL, R, Microarray analysis, Perl, Transcriptomics, Computational and theoretical biology, Data Management
General Bioinformatics