/output/Rywal_vecscreen.tsv

Version 1

ID	Genus_of_query_if_known,_or_1_otherwise	Species_of_query_if_known,_or_1_otherwise	Lower_end_of_the_alignment_in_the_vector	Upper_end_of_the_alignment_in_the_vector	Matching_vector,_starting_with_uv|	One_end_of_the_alignment_in_the_vector	The_other_end_of_the_alignment_in_the_vector	The_strength_of_this_vecscreen_match_	The_strength_of_the_strongest_vecscreen_match_for_this_query	Whether_there_is_any_dangling_part_(called_"Suspect"_by_vecscreen)_at_either_end_of_the_query	the_classification_of_the_match	Most_pertinent_taxid_of_the_vector_interval_	Lowest_common_ancestor_of_column_2_and_column_13	blastn_desc	coverage
SdnRY1_8	1	1	8578	9231	uv|JN204884.1:1-781	22	675	Strong	Strong	None	NO_DATA	1	1	Potato virus Y genes encoding viral polyprotein	7.073989817
SdnRY1_8	1	1	8574	8626	uv|KF718991.1:2252-2305	2	54	Strong	Strong	None	NO_DATA	1	1	Potato virus Y genes encoding viral polyprotein	0.56331925
SdnRY1_9	1	1	20	36	uv|U59231.1:5103-7490	750	766	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	5658	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase UPL1-like (LOC102593233), mRNA	0.17444396
CLCdnRY8_8041	1	1	15	32	uv|M77169.1:820-5161	813	796	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum sacsin (LOC102603537), mRNA	0.215763422
CLCdnRY11_54158	1	1	7797	7818	uv|KF719007.1:2203-2693	119	97	Weak	Weak	Suspect[7819,7833];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061968 (LOC107061968), ncRNA	0.268096515
CLCdnRY8_16127	1	1	6253	6268	uv|KY031726.1:1-7905	7724	7709	Weak	Weak	Suspect[6269,6275];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum phosphatidylinositol 4-kinase alpha 1 (LOC102594185), mRNA	0.239043825
CLCdnRY3_8782	1	1	13	30	uv|U13849.1:637-735	61	44	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum eukaryotic translation initiation factor 4G (LOC102589798), mRNA	0.293558971
CLCdnRY10_23246	1	1	13	28	uv|V00604.2:1-6407-49	3212	3197	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602320 (LOC102602320), mRNA	0.259695291
CLCdnRY11_8109	1	1	5478	5493	uv|AF028837.1:233-521	112	97	Weak	Weak	Suspect[5494,5504];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587522 (LOC102587522), mRNA	0.27252907
VdnRY2_5311	1	1	2143	3908	uv|J02482.1:1-5386-49	1	1766	Strong	Strong	None	TRUE_BIOLOGICAL	10842	1	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	32.34970674
VdnRY2_5311	1	1	282	1312	uv|J02482.1:1-5386-49	4010	5040	Strong	Strong	None	TRUE_BIOLOGICAL	10842	1	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	18.87829912
VdnRY2_5311	1	1	1313	2191	uv|J02482.1:1-5386-49	4557	5435	Strong	Strong	None	TRUE_BIOLOGICAL	10842	1	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	16.09237537
VdnRY2_5311	1	1	3909	4785	uv|J02482.1:1-5386-49	1485	2361	Strong	Strong	None	TRUE_BIOLOGICAL	10842	1	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	16.05571848
VdnRY2_5311	1	1	4785	5456	uv|J02482.1:1-5386-49	1766	2437	Strong	Strong	None	TRUE_BIOLOGICAL	10842	1	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	12.2983871
VdnRY2_5311	1	1	1	284	uv|J02482.1:1-5386-49	4242	4525	Strong	Strong	None	TRUE_BIOLOGICAL	10842	1	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	5.186950147
CLCdnRY10_12325	1	1	1	5020	uv|J02482.1:1-5386-49	5020	1	Strong	Strong	None	TRUE_BIOLOGICAL	10842	1	Sphingorhabdus sp. Alg231_15 genome assembly, chromosome: II	93.18603788
CLCdnRY12_12397	1	1	2610	5386	uv|J02482.1:1-5386-49	5435	2659	Strong	Strong	None	TRUE_BIOLOGICAL	10842	1	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	51.54103231
CLCdnRY12_12397	1	1	1	2658	uv|J02482.1:1-5386-49	2658	1	Strong	Strong	None	TRUE_BIOLOGICAL	10842	1	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	49.33160045
CLCdnRY10_12325	1	1	4972	5386	uv|J02482.1:1-5386-49	5435	5021	Strong	Strong	None	TRUE_BIOLOGICAL	10842	1	Sphingorhabdus sp. Alg231_15 genome assembly, chromosome: II	7.686594876
SdnRY1_216	1	1	1	16	uv|KF719002.1:2205-2598	261	246	Weak	Weak	None	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602693 (LOC102602693), mRNA	0.280007467
CLCdnRY2_6998	1	1	5251	5266	uv|AF028837.1:233-521	112	97	Weak	Weak	Suspect[5267,5277];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587522 (LOC102587522), mRNA	0.284252416
CLCdnRY12_32007	1	1	15	32	uv|M77169.1:820-5161	2264	2247	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum proteasome activator subunit 4 (LOC102597401), mRNA	0.324675325
SdnRY1_249	1	1	5081	5097	uv|AF379854.1:3-2710	2037	2053	Weak	Weak	Suspect[5098,5105];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum ARF guanine-nucleotide exchange factor GNOM-like (LOC102578179), transcript variant X9, mRNA	0.313418217
CLCdnRY12_34674	1	1	4763	4779	uv|A14153.1:1-68	20	4	Weak	Weak	Suspect[4780,4799];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum histone-lysine N-methyltransferase 2C-like (LOC102586916), transcript variant X3, mRNA	0.333402792
CLCdnRY12_40018	1	1	4744	4759	uv|KC702231.1:1-1021	824	809	Weak	Weak	Suspect[4760,4779];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102603942 (LOC102603942), transcript variant X1, mRNA	0.313873195
SdnRY1_336	1	1	13	28	uv|L05081.1:2594-3343	158	173	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative ABC transporter C family member 15 (LOC102605925), mRNA	0.314729333
SdnRY1_340	1	1	4740	4755	uv|EF694056.1:1-945	224	239	Weak	Weak	Suspect[4756,4758];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At4g08850 (LOC102597581), mRNA	0.315258512
SdnRY1_415	1	1	4553	4568	uv|KC702174.1:1-273	140	125	Weak	Weak	Suspect[4569,4573];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum protein CHROMATIN REMODELING 5 (LOC102593358), transcript variant X3, mRNA	0.328012246
CLCdnRY10_4329	1	1	9	24	uv|KY031735.1:1-4680	1773	1788	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602910 (LOC102602910), transcript variant X2, mRNA	0.332741792
CLCdnRY9_24096	1	1	4466	4484	uv|U55760.1:1-2749	583	565	Moderate	Moderate	Suspect[4485,4505];	NO_DATA	1	1	PREDICTED: Solanum tuberosum brefeldin A-inhibited guanine nucleotide-exchange protein 1 (LOC102590847), mRNA	0.399556049
PBdnRY1_9394	1	1	1	26	uv|NGB00323.1:1-37	13	37	Moderate	Moderate	Suspect[4470,4473];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum auxin response factor 7-like (LOC102594021), mRNA	0.55890901
PBdnRY1_9394	1	1	4454	4469	uv|AY568055.1:6692-7837	268	253	Weak	Moderate	Suspect[4470,4473];	NO_DATA	1	1	PREDICTED: Solanum tuberosum auxin response factor 7-like (LOC102594021), mRNA	0.335345406
PBdnRY1_8323	1	1	4210	4225	uv|U89960.1:3-1162	173	158	Weak	Weak	Suspect[4226,4241];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum phospholipid-transporting ATPase 6 (LOC102589917), mRNA	0.353690167
CLCdnRY10_4559	1	1	4194	4209	uv|GU593055.1:13024-13902-49	790	805	Weak	Weak	Suspect[4210,4214];	TRUE_BIOLOGICAL	2093	1	PREDICTED: Solanum tuberosum carbamoyl-phosphate synthase large chain, chloroplastic (LOC102581397), partial mRNA	0.355956336
SdnRY1_640	1	1	18	33	uv|EF512631.1:2093-2503	48	63	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ABC transporter C family member 12-like (LOC102583326), transcript variant X10, mRNA	0.358422939
SdnRY1_746	1	1	2	19	uv|U59231.1:5103-7490	1695	1678	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	5658	1	PREDICTED: Solanum tuberosum villin-2 (LOC102603517), mRNA	0.417485265
SdnRY1_754	1	1	18	33	uv|EF512631.1:2093-2503	48	63	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ABC transporter C family member 12-like (LOC102583326), transcript variant X8, mRNA	0.36954915
PBdnRY1_8459	1	1	3979	3994	uv|AF379854.1:3-2710	504	489	Weak	Weak	Suspect[3995,4012];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum structural maintenance of chromosomes protein 3 (LOC102586214), mRNA	0.373878365
CLCdnRY7_23143	1	1	6	27	uv|KC702208.1:1-1350	35	14	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum protein NRDE2 homolog (LOC102606398), transcript variant X3, mRNA	0.525788683
CLCdnRY12_34390	1	1	3940	3955	uv|DQ883659.3:1-743	347	362	Weak	Weak	Suspect[3956,3972];	NO_DATA	1	1	PREDICTED: Solanum tuberosum nuclear export mediator factor NEMF (LOC102589147), mRNA	0.377643505
CLCdnRY12_1974	1	1	3909	3925	uv|V00604.2:1-6407-49	947	963	Weak	Weak	Suspect[3926,3943];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593326 (LOC102593326), mRNA	0.405782399
PBdnRY1_4603	1	1	3893	3908	uv|X70481.1:3564-4492	556	571	Weak	Weak	Suspect[3909,3922];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102595832 (LOC102595832), mRNA	0.38245793
CLCdnRY7_24251	1	1	3875	3890	uv|KC702166.1:1-523	108	93	Weak	Weak	Suspect[3891,3906];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum cellulose synthase-like protein D5 (LOC102583574), mRNA	0.384024578
CLCdnRY9_13009	1	1	3878	3897	uv|EF429248.1:1-308	140	121	Moderate	Moderate	None	TRUE_BIOLOGICAL	3705	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604111 (LOC102604111), mRNA	0.48692978
CLCdnRY9_13009	1	1	3883	3902	uv|EF429248.1:1-308	141	122	Moderate	Moderate	None	TRUE_BIOLOGICAL	3705	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604111 (LOC102604111), mRNA	0.48692978
PBdnRY1_4109	1	1	3829	3844	uv|DQ391279.1:1-10285	950	965	Weak	Weak	Suspect[3845,3864];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum membrane protein of ER body-like protein (LOC102599586), transcript variant X3, mRNA	0.388198758
CLCdnRY12_32999	1	1	24	39	uv|AY529716.1:3879-4121	59	44	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum transcriptional corepressor SEUSS-like (LOC102586081), mRNA	0.3894081
CLCdnRY12_1456	1	1	17	32	uv|L08860.1:1-1129	143	128	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum guanylate-binding protein 7-like (LOC102581173), mRNA	0.391951921
SdnRY1_1029	1	1	3787	3802	uv|KF718979.1:2206-6730	4375	4390	Weak	Weak	Suspect[3803,3814];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch09, complete genome	0.393287887
SdnRY1_1095	1	1	2	19	uv|U59231.1:5103-7490	1695	1678	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	5658	1	PREDICTED: Solanum tuberosum villin-2 (LOC102586061), mRNA	0.451767207
PBdnRY1_13145	1	1	15	30	uv|KC702228.1:1-1023	454	439	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum AP-2 complex subunit alpha-1-like (LOC102588472), transcript variant X2, mRNA	0.399361022
PBdnRY1_13145	1	1	29	44	uv|NGB00927.1:1-44	26	41	None	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum AP-2 complex subunit alpha-1-like (LOC102588472), transcript variant X2, mRNA	0.399361022
SdnRY1_1145	1	1	12	27	uv|KC702182.1:1-1023	873	888	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum leukocyte receptor cluster member 8 homolog (LOC102594855), transcript variant X2, mRNA	0.402360515
CLCdnRY10_64985	1	1	3688	3707	uv|EF429248.1:1-308	140	121	Moderate	Moderate	Suspect[3713,3713];	TRUE_BIOLOGICAL	3705	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604111 (LOC102604111), mRNA	0.511715594
CLCdnRY10_64985	1	1	3693	3712	uv|EF429248.1:1-308	141	122	Moderate	Moderate	Suspect[3713,3713];	TRUE_BIOLOGICAL	3705	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604111 (LOC102604111), mRNA	0.511715594
PBdnRY1_7603	1	1	5	20	uv|J02459.1:1-48502-49	41707	41692	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum MATH domain-containing protein At5g43560-like (LOC102590891), transcript variant X1, mRNA	0.404094828
CLCdnRY4_21209	1	1	3675	3690	uv|JN581377.1:1749-2242	171	186	Weak	Weak	Suspect[3691,3696];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum kinesin-related protein 11-like (LOC102578372), transcript variant X1, mRNA	0.405844156
SdnRY1_1239	1	1	3618	3634	uv|KC702228.1:1-1023	51	35	Weak	Weak	Suspect[3635,3648];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum receptor-like protein kinase 2 (LOC102583332), transcript variant X1, mRNA	0.438596491
CLCdnRY10_42944	1	1	3606	3621	uv|Z29589.1:3211-4486	1180	1165	Weak	Weak	Suspect[3622,3644];	TRUE_BIOLOGICAL	4527	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase EDR1-like (LOC102586582), transcript variant X1, mRNA	0.411635565
SdnRY1_1264	1	1	3608	3623	uv|AY508732.1:1351-1608	175	190	Weak	Weak	Suspect[3624,3636];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596584 (LOC102596584), transcript variant X3, mRNA	0.412541254
PBdnRY1_6859	1	1	16	31	uv|U13189.1:9688-10585	67	52	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum 26S proteasome non-ATPase regulatory subunit 1 homolog A (LOC102585142), mRNA	0.415973378
CLCdnRY1_22505	1	1	19	34	uv|Z29589.1:3211-4486	364	379	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	4527	1	PREDICTED: Solanum tuberosum mitotic spindle checkpoint protein MAD1 (LOC102604068), mRNA	0.419815281
CLCdnRY8_25711	1	1	3511	3526	uv|J02400.1:1-5243-49	684	669	Weak	Weak	Suspect[3527,3532];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum kinesin-related protein 11-like (LOC102579121), transcript variant X1, mRNA	0.424688562
SdnRY1_1452	1	1	3494	3509	uv|KF718979.1:2206-6730	4375	4390	Weak	Weak	Suspect[3510,3521];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch09, complete genome	0.426015337
CLCdnRY1_22713	1	1	1585	1607	uv|KC702234.1:1-1022	778	800	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum ATP-dependent zinc metalloprotease FTSH 12, chloroplastic (LOC102589653), mRNA	0.62821245
PBdnRY1_10880	1	1	5	23	uv|KC702219.1:1-1059	522	504	Moderate	Moderate	Suspect[1,4];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase KIPK-like (LOC102586543), mRNA	0.514285714
CLCdnRY12_72676	1	1	10	25	uv|X65279.1:5941-7353	248	233	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum leukocyte receptor cluster member 8 homolog (LOC102594855), transcript variant X1, mRNA	0.429799427
SdnRY1_1518	1	1	3456	3471	uv|Y10544.1:4398-4492	52	37	Weak	Weak	Suspect[3472,3478];	NO_DATA	1	1	PREDICTED: Capsicum annuum CST complex subunit CTC1 (LOC107877926), transcript variant X1, mRNA	0.431282346
CLCdnRY9_67376	1	1	16	31	uv|KC702235.1:1-872	808	823	Weak	Weak	Suspect[1,15];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At4g20940 (LOC102599430), mRNA	0.432152118
SdnRY1_1543	1	1	18	33	uv|M28829.1:1-8684-49	3022	3007	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	561	1	Solanum lycopersicum cultivar I-3 chromosome 1	0.433025404
CLCdnRY1_5904	1	1	16	38	uv|KC702202.1:1-1020	1013	991	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum phosphoinositide phosphatase SAC3-like (LOC102590842), transcript variant X2, mRNA	0.640465793
CLCdnRY7_31250	1	1	21	36	uv|M34298.1:3143-4604	871	886	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum uncharacterized LOC102605499 (LOC102605499), mRNA	0.439882698
CLCdnRY8_23974	1	1	3365	3380	uv|EU546814.1:1149-1246	31	46	Weak	Weak	Suspect[3381,3398];	NO_DATA	1	1	PREDICTED: Solanum tuberosum formin-like protein 20 (LOC102593556), mRNA	0.441436139
CLCdnRY11_14443	1	1	13	28	uv|KY031734.1:1-4625	691	676	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum protein NLP9-like (LOC102596781), mRNA	0.443131462
CLCdnRY12_8449	1	1	3	18	uv|U13843.1:1887-9923	7275	7260	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	325454	1	Solanum tuberosum StEIG-A51 mRNA for CC-NB-LRR protein, complete cds	0.44576523
SdnRY1_1726	1	1	3331	3346	uv|KF719005.1:2205-5132	1129	1144	Weak	Weak	Suspect[3347,3358];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum cation-chloride cotransporter 1-like (LOC102606011), transcript variant X1, mRNA	0.446694461
CLCdnRY7_7935	1	1	3329	3344	uv|J02459.1:1-48502-49	24073	24088	Weak	Weak	Suspect[3345,3354];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum mitochondrial inner membrane protease subunit 1-like (LOC102592437), mRNA	0.447227191
CLCdnRY7_13052	1	1	14	30	uv|KM407511.1:1093-1625	249	265	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum dynamin-2A-like (LOC102601420), mRNA	0.480192077
PBdnRY1_13469	1	1	3306	3322	uv|J02459.1:1-48502-49	30997	30981	Weak	Weak	Suspect[3323,3330];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum receptor-like protein kinase HAIKU2 (LOC102604191), mRNA	0.48048048
CLCdnRY7_20302	1	1	3296	3311	uv|KC702178.1:1-2022	631	616	Weak	Weak	Suspect[3312,3327];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 53-like (LOC102596190), transcript variant X1, mRNA	0.450856628
CLCdnRY9_20148	1	1	3282	3298	uv|KF718978.1:2204-3575	762	746	Weak	Weak	Suspect[3299,3317];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum uncharacterized LOC102601564 (LOC102601564), transcript variant X1, mRNA	0.482363582
CLCdnRY3_32519	1	1	18	36	uv|M16192.1:1-2517-49	1216	1198	Moderate	Moderate	Suspect[1,17];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein FAM135B-like (LOC102603142), mRNA	0.543478261
CLCdnRY11_36700	1	1	7	22	uv|KC702183.1:1-1023	767	752	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum DNA mismatch repair protein PMS1 (LOC102596485), mRNA	0.453446191
CLCdnRY2_8239	1	1	2	17	uv|M16217.1:3121-3879-49	225	240	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum ETO1-like protein 1 (LOC102600157), mRNA	0.458575359
PBdnRY1_3378	1	1	3236	3252	uv|KF680544.1:323-942	444	460	Weak	Weak	Suspect[3253,3268];	NO_DATA	1	1	PREDICTED: Solanum tuberosum leucine--tRNA ligase, chloroplastic/mitochondrial (LOC102579311), mRNA	0.489596083
CLCdnRY8_32010	1	1	18	35	uv|J02459.1:1-48502-49	36895	36878	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase RUNKEL (LOC102596239), transcript variant X2, mRNA	0.527622595
SdnRY1_2081	1	1	11	26	uv|NGB01019.1:104-202	35	50	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum LRR receptor-like serine/threonine-protein kinase FLS2 (LOC102593454), mRNA	0.465549348
CLCdnRY10_20679	1	1	16	31	uv|JF909482.1:3850-8059	1440	1455	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum dynamin-related protein 3A-like (LOC102589822), transcript variant X2, mRNA	0.468603561
CLCdnRY10_13016	1	1	8	23	uv|M74186.1:2188-2959	248	263	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein ROOT HAIR DEFECTIVE 3 (LOC102588648), mRNA	0.46875
CLCdnRY12_13341	1	1	7	22	uv|M74186.1:2188-2959	248	263	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein ROOT HAIR DEFECTIVE 3 (LOC102588648), mRNA	0.46889653
SdnRY1_2157	1	1	3165	3182	uv|FJ931533.1:7978-12753-49	3776	3759	Weak	Weak	Suspect[3183,3195];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum B3 domain-containing transcription repressor VAL2 (LOC102595071), transcript variant X1, mRNA	0.532081377
CLCdnRY10_7081	1	1	14	29	uv|JN581377.1:1749-2242	305	290	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum eukaryotic translation initiation factor 3 subunit C-like (LOC102595553), mRNA	0.469483568
CLCdnRY1_17310	1	1	3169	3184	uv|Z46234.1:1-402	322	307	Weak	Weak	Suspect[3185,3192];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum peptidyl-prolyl cis-trans isomerase CYP95 (LOC102595843), transcript variant X1, mRNA	0.469924812
CLCdnRY11_67104	1	1	3161	3177	uv|AY962893.1:2004-2563	191	175	Weak	Weak	Suspect[3178,3190];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g16880 (LOC102596368), mRNA	0.501567398
CLCdnRY11_59915	1	1	24	39	uv|U02450.1:1638-1736	33	48	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum regulator of nonsense transcripts 1 homolog (LOC102580894), mRNA	0.472440945
PBdnRY1_8519	1	1	3148	3163	uv|JN581377.1:1749-2242	290	305	Weak	Weak	Suspect[3164,3164];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum eukaryotic translation initiation factor 3 subunit C-like (LOC102595553), mRNA	0.474083439
SdnRY1_2318	1	1	8	25	uv|KC702228.1:1-1023	507	490	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-3 (LOC102592255), transcript variant X4, mRNA	0.541056652
PBdnRY1_11275	1	1	3121	3136	uv|X51450.1:2521-3852	745	730	Weak	Weak	None	TRUE_BIOLOGICAL	91061	1	PREDICTED: Solanum tuberosum probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC (LOC102597898), mRNA	0.478316327
CLCdnRY1_31807	1	1	3090	3105	uv|U09128.1:1-1663	208	223	Weak	Weak	Suspect[3106,3113];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 (LOC102580410), mRNA	0.481850305
CLCdnRY11_15697	1	1	14	31	uv|FJ931533.1:7978-12753-49	3759	3776	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum B3 domain-containing transcription repressor VAL2 (LOC102595071), transcript variant X2, mRNA	0.546272494
CLCdnRY12_25027	1	1	3074	3089	uv|KC702178.1:1-2022	631	616	Weak	Weak	Suspect[3090,3105];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 53-like (LOC102596190), transcript variant X3, mRNA	0.483091787
CLCdnRY11_6949	1	1	13	28	uv|JN581377.1:1749-2242	305	290	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum eukaryotic translation initiation factor 3 subunit C-like (LOC102595553), mRNA	0.484652666
CLCdnRY10_22779	1	1	3048	3063	uv|U89932.1:553-1856	1150	1135	Weak	Weak	Suspect[3064,3069];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized protein At5g05190-like (LOC102595735), transcript variant X1, mRNA	0.488758553
SdnRY1_2614	1	1	3014	3029	uv|NGB00413.1:4732-7508	1949	1964	Weak	Weak	Suspect[3030,3040];	TRUE_BIOLOGICAL	12103	1	PREDICTED: Solanum lycopersicum SART-1 family protein DOT2 (LOC101246008), mRNA	0.493421053
CLCdnRY10_25587	1	1	13	28	uv|AF379854.1:3-2710	1619	1634	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587704 (LOC102587704), transcript variant X2, mRNA	0.494071146
PBdnRY1_4925	1	1	2998	3014	uv|KP057689.1:1-859	352	336	Weak	Weak	Suspect[3015,3035];	TRUE_BIOLOGICAL	84111	1	PREDICTED: Solanum tuberosum beta-galactosidase 10 (LOC102605534), mRNA	0.527182867
SdnRY1_2671	1	1	2986	3001	uv|EU546815.1:1997-2088	81	66	Weak	Weak	Suspect[3002,3022];	TRUE_BIOLOGICAL	28883	1	PREDICTED: Solanum pennellii putative U-box domain-containing protein 50 (LOC107004974), mRNA	0.496360026
CLCdnRY10_9180	1	1	25	42	uv|L08919.1:1395-1946	300	317	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum DNA repair protein RAD16-like (LOC102584572), mRNA	0.565159574
CLCdnRY1_38144	1	1	16	32	uv|Z22761.1:7913-8742-49	805	821	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	10088	1	PREDICTED: Solanum tuberosum receptor-like serine/threonine-protein kinase At2g45590 (LOC102577771), mRNA	0.532623169
SdnRY1_2785	1	1	25	40	uv|KC702222.1:1-1033	751	766	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	33958	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-3 (LOC102598766), transcript variant X3, mRNA	0.500834725
SdnRY1_2785	1	1	33	48	uv|JF909481.1:3855-5640	1217	1202	None	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-3 (LOC102598766), transcript variant X3, mRNA	0.500834725
CLCdnRY10_19244	1	1	11	26	uv|U67875.1:6835-8216	814	829	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum probable receptor-like serine/threonine-protein kinase At5g57670 (LOC102598544), mRNA	0.502344273
CLCdnRY12_90795	1	1	14	31	uv|FJ931533.1:7978-12753-49	3759	3776	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum B3 domain-containing transcription repressor VAL2 (LOC102595071), transcript variant X2, mRNA	0.572005384
PBdnRY1_12979	1	1	2957	2972	uv|KC702236.1:1-1024	628	613	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase BRE1-like 1 (LOC102583070), mRNA	0.504710633
CLCdnRY2_12550	1	1	2933	2948	uv|FJ160465.1:282-383	79	94	Weak	Weak	Suspect[2949,2971];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060606 (LOC107060606), mRNA	0.504880512
PBdnRY1_11311	1	1	2933	2950	uv|NGB01019.1:104-202	41	58	Weak	Weak	Suspect[2951,2967];	NO_DATA	1	1	PREDICTED: Solanum pennellii uncharacterized LOC107031153 (LOC107031153), transcript variant X3, mRNA	0.572969329
CLCdnRY1_10143	1	1	13	28	uv|AF532108.1:239-341	52	67	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At1g79490, mitochondrial (LOC102598668), mRNA	0.506243672
CLCdnRY9_27241	1	1	2926	2942	uv|J02459.1:1-48502-49	7744	7728	Weak	Weak	Suspect[2943,2950];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (LOC102587090), transcript variant X1, mRNA	0.542372881
CLCdnRY12_17229	1	1	4	20	uv|JF909482.1:3850-8059	287	271	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum F-box protein At1g78280 (LOC102582038), mRNA	0.544402858
PBdnRY1_10490	1	1	2912	2928	uv|AB248920.1:3947-4044	57	41	Weak	Weak	Suspect[2929,2933];	NO_DATA	1	1	PREDICTED: Solanum tuberosum homeobox-leucine zipper protein ATHB-15 (LOC102589714), mRNA	0.545516536
CLCdnRY7_21123	1	1	8	23	uv|DQ666274.1:249-3225	1578	1593	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum 5-oxoprolinase (LOC102582244), mRNA	0.514756349
SdnRY1_3131	1	1	22	37	uv|AF379854.1:3-2710	1161	1176	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum auxin response factor 8-like (LOC102597704), transcript variant X1, mRNA	0.515641114
CLCdnRY1_17962	1	1	16	31	uv|KC702206.1:1-523	409	394	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probably inactive leucine-rich repeat receptor-like protein kinase IMK2 (LOC102591730), mRNA	0.515995872
CLCdnRY12_5678	1	1	2868	2883	uv|HM640258.1:3527-5744	2132	2147	Weak	Weak	Suspect[2884,2901];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At1g67720 (LOC102579593), mRNA	0.517063082
PBdnRY1_5831	1	1	10	25	uv|J02459.1:1-48502-49	25273	25258	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum protein IQ-DOMAIN 32 (LOC102588969), mRNA	0.517063082
CLCdnRY10_46518	1	1	14	30	uv|KC702231.1:1-1021	827	843	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum autophagy-related protein 9 (LOC102586846), transcript variant X1, mRNA	0.557103064
CLCdnRY10_37470	1	1	2835	2850	uv|L08862.1:1-2039	923	938	Weak	Weak	Suspect[2851,2870];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum lipoxygenase (POTLX-3), mRNA<>Solanum tuberosum lipoxygenase (POTLX-3) mRNA, complete cds	0.522648084
SdnRY1_3336	1	1	22	37	uv|AF379854.1:3-2710	1161	1176	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum auxin response factor 8-like (LOC102597704), transcript variant X2, mRNA	0.523925952
PBdnRY1_4735	1	1	2829	2844	uv|J02459.1:1-48502-49	47680	47665	Weak	Weak	Suspect[2845,2853];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum U-box domain-containing protein 35-like (LOC102588071), transcript variant X1, mRNA	0.525762355
CLCdnRY12_3507	1	1	20	36	uv|KM407512.1:886-4985	2465	2449	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized protein sll0005 (LOC102586338), mRNA	0.562983814
PBdnRY1_11276	1	1	2804	2819	uv|U89671.1:1-253	97	82	Weak	Weak	Suspect[2820,2842];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum DNA topoisomerase 3-beta (LOC102599971), transcript variant X1, mRNA	0.527797326
CLCdnRY12_14249	1	1	2817	2832	uv|KF718979.1:2206-6730	759	744	Weak	Weak	Suspect[2833,2840];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060064 (LOC107060064), mRNA	0.528169014
CLCdnRY11_51133	1	1	6	21	uv|AF379854.1:4263-5841	99	114	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase CTR1-like (LOC102597348), transcript variant X1, mRNA	0.528727529
CLCdnRY12_25313	1	1	15	30	uv|KC702218.1:1-1133	1048	1063	Weak	Weak	Suspect[1,14];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-3 (LOC102605175), mRNA	0.528727529
CLCdnRY11_8678	1	1	2789	2804	uv|U09365.1:1592-3128	680	695	Weak	Weak	Suspect[2805,2807];	NO_DATA	1	1	PREDICTED: Solanum tuberosum acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal (LOC102594153), mRNA	0.53437834
SdnRY1_3593	1	1	3	18	uv|DQ391279.1:1-10285	6362	6377	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC102587497), mRNA	0.534759358
SdnRY1_3607	1	1	2767	2783	uv|KF680544.1:323-942	483	499	Weak	Weak	Suspect[2784,2801];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578142 (LOC102578142), mRNA	0.571224563
CLCdnRY11_73168	1	1	2738	2754	uv|U29899.1:4697-5948	847	863	Weak	Weak	Suspect[2755,2777];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604464 (LOC102604464), transcript variant X1, mRNA	0.576161325
CLCdnRY11_7448	1	1	2736	2752	uv|X65279.1:5941-7353	199	183	Weak	Weak	Suspect[2753,2774];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At1g14390 (LOC102600955), mRNA	0.576784427
CLCdnRY10_321	1	1	2728	2749	uv|GU593054.1:1-1305	596	575	Weak	Weak	Suspect[2750,2770];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum ferric reduction oxidase 8, mitochondrial (LOC102579721), mRNA	0.758122744
CLCdnRY12_8389	1	1	2753	2768	uv|U09365.1:1592-3128	680	695	Weak	Weak	Suspect[2769,2770];	NO_DATA	1	1	PREDICTED: Solanum tuberosum acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal (LOC102594153), mRNA	0.541516245
SdnRY1_3755	1	1	2747	2763	uv|AY597273.1:2264-2316	43	27	Weak	Weak	Suspect[2764,2769];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum pennellii nucleolar protein 6 (LOC107008763), mRNA	0.57782593
CLCdnRY8_22335	1	1	4	19	uv|M77169.1:820-5161	2126	2111	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum chloride channel protein CLC-e (LOC102592091), transcript variant X4, misc_RNA	0.542495479
CLCdnRY11_4134	1	1	21	37	uv|KF718979.1:2206-6730	1664	1648	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum protein VAC14 homolog (LOC102606383), mRNA	0.581395349
CLCdnRY12_3937	1	1	20	36	uv|KF718979.1:2206-6730	1664	1648	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum protein VAC14 homolog (LOC102606383), mRNA	0.581606688
CLCdnRY5_31146	1	1	2728	2743	uv|AF532106.2:140-235	83	68	Weak	Weak	Suspect[2744,2751];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum pennellii urease (LOC107020470), transcript variant X1, mRNA	0.54525627
SdnRY1_3848	1	1	2725	2741	uv|JF909482.1:3850-8059	1963	1979	Weak	Weak	Suspect[2742,2746];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 8	0.582665696
PBdnRY1_894	1	1	25	40	uv|L08860.1:1858-2910-49	959	974	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum probable linoleate 9S-lipoxygenase 5 (LOC102589305), mRNA	0.54664723
CLCdnRY10_35787	1	1	1	16	uv|AY962893.1:3682-3780	36	21	Weak	Weak	None	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum tuberosum LRR receptor-like serine/threonine-protein kinase GSO1 (LOC102590832), mRNA	0.548045305
CLCdnRY2_12610	1	1	23	38	uv|JN874480.1:1050-2714	1301	1316	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum nucleoprotein TPR (LOC102599392), mRNA	0.548446069
CLCdnRY11_41035	1	1	3	24	uv|JF909481.1:3855-5640	1108	1086	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 (LOC102584813), transcript variant X1, mRNA	0.768667643
SdnRY1_3917	1	1	2690	2706	uv|JQ927446.1:4885-6835-49	1134	1150	Weak	Weak	Suspect[2707,2730];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic (LOC102601429), transcript variant X1, mRNA	0.586080586
SdnRY1_3928	1	1	22	37	uv|KC702212.1:1-1136	442	427	Weak	Weak	Suspect[1,21];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum uncharacterized LOC102581769 (LOC102581769), transcript variant X4, mRNA	0.549651887
CLCdnRY11_24888	1	1	2696	2713	uv|KC702229.1:1-537	408	391	Weak	Weak	Suspect[2714,2725];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum probable E3 ubiquitin-protein ligase ARI7 (LOC102591171), mRNA	0.623853211
CLCdnRY10_36392	1	1	18	36	uv|M16192.1:1-2517-49	1216	1198	Moderate	Moderate	Suspect[1,17];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein FAM135B-like (LOC102603142), mRNA	0.662251656
CLCdnRY10_13570	1	1	22	38	uv|KC702237.1:1-1024	741	725	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum carbon catabolite repressor protein 4 homolog 1-like (LOC102601337), mRNA	0.593692022
CLCdnRY10_23095	1	1	15	30	uv|EF437940.1:2628-3510	54	39	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599034 (LOC102599034), transcript variant X1, mRNA	0.557413601
CLCdnRY11_56334	1	1	2673	2688	uv|KF718979.1:2206-6730	4325	4310	Weak	Weak	None	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum potassium channel SKOR (LOC102582312), mRNA	0.558035714
SdnRY1_4189	1	1	2641	2658	uv|AF129072.1:907-3477	147	164	Weak	Weak	Suspect[2659,2680];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pre-rRNA-processing protein ESF1 (LOC102602551), mRNA	0.634328358
CLCdnRY10_39939	1	1	2657	2672	uv|U03463.1:2202-2302	79	94	Weak	Weak	Suspect[2673,2674];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum subtilisin-like protease SBT1.7 (LOC102583163), mRNA	0.560957367
CLCdnRY10_33818	1	1	2623	2638	uv|J02459.1:1-48502-49	2959	2974	Weak	Weak	Suspect[2639,2640];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase D6PK (LOC102604227), mRNA	0.568181818
CLCdnRY6_13750	1	1	6	21	uv|U02436.1:1330-2607	376	361	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum auxin response factor 18 (LOC102586095), transcript variant X1, mRNA	0.570125428
CLCdnRY6_15145	1	1	2601	2616	uv|JF909482.1:3850-8059	3566	3581	Weak	Weak	Suspect[2617,2630];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 30-like (LOC102591764), transcript variant X1, mRNA	0.570342205
CLCdnRY8_13028	1	1	21	36	uv|JN874480.1:1050-2714	1301	1316	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum nucleoprotein TPR (LOC102599392), mRNA	0.573175392
CLCdnRY10_5525	1	1	2600	2615	uv|U64448.1:5930-6024	90	75	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase PBS1 (LOC102596991), mRNA	0.573613767
CLCdnRY10_3262	1	1	2597	2613	uv|KF680544.1:323-942	192	176	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum VHS domain-containing protein At3g16270 (LOC102588435), mRNA	0.612323
CLCdnRY11_37406	1	1	18	33	uv|Z29589.1:3211-4486	364	379	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	4527	1	PREDICTED: Solanum tuberosum mitotic spindle checkpoint protein MAD1 (LOC102604068), mRNA	0.576258164
CLCdnRY10_23206	1	1	2561	2576	uv|M18328.1:2128-2226	37	22	Weak	Weak	Suspect[2577,2600];	TRUE_BIOLOGICAL	10860	1	PREDICTED: Solanum tuberosum la-related protein 1C-like (LOC102587450), mRNA	0.576923077
CLCdnRY1_26611	1	1	2551	2566	uv|NGB00188.1:1-46	3	18	Weak	Weak	Suspect[2567,2578];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum subtilisin-like protease SBT1.7 (LOC102580470), mRNA	0.581846393
PBdnRY1_10948	1	1	7	22	uv|AF025844.2:1-1301	843	828	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	6134	1	PREDICTED: Solanum tuberosum wall-associated receptor kinase 2-like (LOC102584582), mRNA	0.58297707
CLCdnRY8_4776	1	1	8	23	uv|KM407505.1:939-2365	616	601	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum ATP-dependent zinc metalloprotease FTSH 9, chloroplastic (LOC102593764), mRNA	0.583657588
CLCdnRY10_35100	1	1	2550	2565	uv|U09128.1:1-1663	936	951	Weak	Weak	Suspect[2566,2569];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum diacylglycerol kinase 2 (LOC102603370), mRNA	0.58388478
PBdnRY1_4372	1	1	23	39	uv|Z29589.1:3211-4486	876	892	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	4527	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589724 (LOC102589724), transcript variant X1, mRNA	0.624268435
CLCdnRY3_17491	1	1	2539	2554	uv|DQ391279.1:1-10285	6377	6362	Weak	Weak	Suspect[2555,2556];	NO_DATA	1	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC102587497), mRNA	0.58685446
CLCdnRY9_16806	1	1	2539	2554	uv|DQ391279.1:1-10285	6377	6362	Weak	Weak	Suspect[2555,2556];	NO_DATA	1	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC102587497), mRNA	0.58685446
CLCdnRY11_9913	1	1	19	34	uv|KF718979.1:2206-6730	426	411	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum cycloartenol Synthase-like (LOC102602455), transcript variant X1, mRNA	0.590551181
CLCdnRY2_16686	1	1	19	34	uv|KC702237.1:1-1024	393	408	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum putative receptor-like protein kinase At1g80870 (LOC102586213), mRNA	0.59148265
PBdnRY1_1719	1	1	2493	2508	uv|U67875.1:6835-8216	834	849	Weak	Weak	Suspect[2509,2528];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum receptor-like serine/threonine-protein kinase At2g45590 (LOC102604233), mRNA	0.59335443
PBdnRY1_11345	1	1	2496	2511	uv|J02482.1:1-5386-49	2902	2887	Weak	Weak	Suspect[2512,2521];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At3g53700, chloroplastic (LOC102585429), mRNA	0.595001983
SdnRY1_5146	1	1	5	21	uv|J02459.1:1-48502-49	27036	27052	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599910 (LOC102599910), mRNA	0.636435959
SdnRY1_5219	1	1	17	33	uv|KY031726.1:1-7905	5091	5107	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	82115	1	Solanum tuberosum Hsp90-2-like (LOC102577431), mRNA<>Solanum tuberosum clone 054G03 Hsp90-2-like mRNA, complete cds	0.639744102
SdnRY1_5248	1	1	2458	2473	uv|JX560397.1:83-5970	2321	2336	Weak	Weak	Suspect[2474,2497];	TRUE_BIOLOGICAL	1236	1	Solanum lycopersicum chromosome ch03, complete genome	0.600720865
CLCdnRY10_6857	1	1	22	37	uv|KF718979.1:2206-6730	1396	1381	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581473 (LOC102581473), mRNA	0.601684717
PBdnRY1_475	1	1	16	31	uv|U13869.1:2390-2731	279	294	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum acyl-CoA-binding domain-containing protein 4 (LOC102597813), transcript variant X1, mRNA	0.604107934
CLCdnRY10_1472	1	1	2463	2479	uv|J02459.1:1-48502-49	47195	47211	Weak	Weak	None	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum MAR-binding filament-like protein 1 (LOC102603010), mRNA	0.645421541
PBdnRY1_14028	1	1	23	45	uv|NGB00088.1:29-349	151	173	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase MBR2-like (LOC102580028), transcript variant X2, mRNA	0.887812752
CLCdnRY3_29057	1	1	2438	2453	uv|KF853602.1:1019-2932	1610	1595	Weak	Weak	Suspect[2454,2474];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581000 (LOC102581000), transcript variant X1, mRNA	0.606305578
CLCdnRY10_53801	1	1	16	32	uv|Z22761.1:7913-8742-49	805	821	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	10088	1	PREDICTED: Solanum tuberosum receptor-like serine/threonine-protein kinase At2g45590 (LOC102577771), mRNA	0.648824006
CLCdnRY1_1343	1	1	25	40	uv|AF379854.1:3-2710	1528	1543	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599124 (LOC102599124), mRNA	0.610500611
SdnRY1_5530	1	1	1	17	uv|M16192.1:1-2517-49	1449	1433	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum pennellii ABC transporter C family member 13 (LOC107014548), transcript variant X9, mRNA	0.651465798
CLCdnRY11_4121	1	1	16	31	uv|KF719005.1:2205-5132	1854	1839	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum probable pre-mRNA-splicing factor ATP-dependent RNA helicase (LOC102594667), mRNA	0.611246944
CLCdnRY10_43227	1	1	1	16	uv|KC702208.1:1-1350	1149	1134	Weak	Weak	None	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 (LOC102580410), mRNA	0.611246944
CLCdnRY9_40107	1	1	1	16	uv|KC702208.1:1-1350	1149	1134	Weak	Weak	None	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 (LOC102580410), mRNA	0.611246944
PBdnRY1_571	1	1	2429	2445	uv|JX560397.1:83-5970	4468	4484	Weak	Weak	Suspect[2446,2451];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum subtilisin-like protease SBT1.7 (LOC102603030), mRNA	0.652794778
CLCdnRY10_16301	1	1	2418	2433	uv|AF379854.1:4263-5841	1188	1173	Weak	Weak	Suspect[2434,2441];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chloride channel protein CLC-e (LOC102592091), transcript variant X4, misc_RNA	0.614502253
SdnRY1_5633	1	1	12	27	uv|M77169.1:820-5161	2548	2533	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform (LOC102598615), transcript variant X2, mRNA	0.614754098
CLCdnRY10_19487	1	1	6	21	uv|U02443.1:882-1073	40	25	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum monocopper oxidase-like protein SKU5 (LOC102579082), mRNA	0.616776316
CLCdnRY12_20169	1	1	5	20	uv|U02443.1:882-1073	40	25	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum tuberosum monocopper oxidase-like protein SKU5 (LOC102579082), mRNA	0.617030029
CLCdnRY10_40948	1	1	7	23	uv|M16217.1:1-2529	1603	1587	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum dynamin-related protein 3A-like (LOC102586981), transcript variant X2, mRNA	0.658436214
SdnRY1_5711	1	1	18	33	uv|KC702198.1:1-1023	296	281	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum subtilisin-like protease SBT1.7 (LOC102580546), mRNA	0.617283951
SdnRY1_5747	1	1	2402	2417	uv|NGB01019.1:104-202	50	35	Weak	Weak	Suspect[2418,2427];	NO_DATA	1	1	PREDICTED: Solanum tuberosum LRR receptor-like serine/threonine-protein kinase FLS2 (LOC102593454), mRNA	0.618046972
CLCdnRY10_15633	1	1	23	39	uv|KC702175.1:1-536	446	462	Weak	Weak	Suspect[1,22];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum probable metal-nicotianamine transporter YSL6 (LOC102581903), mRNA	0.659521847
CLCdnRY10_45577	1	1	2388	2403	uv|M16217.1:1-2529	1730	1715	Weak	Weak	Suspect[2404,2425];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579727 (LOC102579727), mRNA	0.618556701
SdnRY1_5772	1	1	10	25	uv|AF379854.1:3-2710	609	624	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum cleft lip and palate transmembrane protein 1 homolog (LOC102605505), transcript variant X3, mRNA	0.619322874
SdnRY1_5772	1	1	12	27	uv|AF379854.1:3-2710	698	683	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum cleft lip and palate transmembrane protein 1 homolog (LOC102605505), transcript variant X3, mRNA	0.619322874
PBdnRY1_9304	1	1	15	30	uv|M86847.1:4610-4716	91	76	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 1-like (LOC102580927), transcript variant X1, mRNA	0.619578686
CLCdnRY10_12525	1	1	2400	2415	uv|J02459.1:1-48502-49	42447	42462	Weak	Weak	Suspect[2416,2420];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum protein FAR1-RELATED SEQUENCE 6-like (LOC102584795), transcript variant X3, mRNA	0.619834711
PBdnRY1_5378	1	1	2383	2400	uv|U02447.1:1-1009	685	668	Weak	Weak	Suspect[2401,2411];	TRUE_BIOLOGICAL	186765	1	PREDICTED: Solanum tuberosum serine/threonine protein phosphatase 2A regulatory subunit B''beta-like (LOC102584799), mRNA	0.705101618
CLCdnRY3_3796	1	1	2393	2409	uv|KF680544.1:323-942	192	176	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum VHS domain-containing protein At3g16270 (LOC102588435), mRNA	0.664176007
CLCdnRY8_1694	1	1	2366	2381	uv|KF718979.1:2206-6730	3076	3061	Weak	Weak	Suspect[2382,2403];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum V-type proton ATPase catalytic subunit A (LOC102591413), mRNA	0.624219725
PBdnRY1_12488	1	1	19	34	uv|KC702182.1:1-1023	371	386	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 8-like (LOC102605476), transcript variant X1, mRNA	0.625
CLCdnRY10_29368	1	1	1	22	uv|U67875.1:6541-6683	61	40	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum cyclic nucleotide-gated ion channel 1-like (LOC102602102), mRNA	0.876095119
SdnRY1_6011	1	1	8	23	uv|KC702182.1:1-1023	877	892	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum lactation elevated protein 1 (LOC102588491), transcript variant X1, mRNA	0.626828249
CLCdnRY11_31092	1	1	2366	2385	uv|U13860.1:6124-7626-49	1157	1176	Moderate	Moderate	Suspect[2386,2392];	TRUE_BIOLOGICAL	140052	1	PREDICTED: Solanum tuberosum outer envelope protein 80, chloroplastic-like (LOC102591358), transcript variant X1, mRNA	0.794314381
CLCdnRY12_60002	1	1	2363	2381	uv|KC702186.1:1-274	134	116	Moderate	Moderate	Suspect[2382,2391];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase RFWD3 (LOC102580985), mRNA	0.752823087
CLCdnRY12_62770	1	1	2360	2375	uv|KC702183.1:1-1023	752	767	Weak	Weak	Suspect[2376,2381];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum DNA mismatch repair protein PMS1 (LOC102596485), mRNA	0.6299874
PBdnRY1_8914	1	1	22	37	uv|AY753578.1:1-838	210	195	Weak	Weak	Suspect[1,21];Suspect[2362,2362];	TRUE_BIOLOGICAL	6181	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 18 (LOC102595733), transcript variant X2, mRNA	0.63078217
PBdnRY1_8914	1	1	2344	2359	uv|AF379854.1:3-2710	380	395	Weak	Weak	Suspect[1,21];Suspect[2362,2362];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 18 (LOC102595733), transcript variant X2, mRNA	0.63078217
PBdnRY1_8914	1	1	2346	2361	uv|AF379854.1:3-2710	1926	1911	Weak	Weak	Suspect[1,21];Suspect[2362,2362];	NO_DATA	1	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 18 (LOC102595733), transcript variant X2, mRNA	0.63078217
PBdnRY1_8914	1	1	2363	2378	uv|M77169.1:820-5161	3482	3497	Weak	Weak	Suspect[1,21];Suspect[2362,2362];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 18 (LOC102595733), transcript variant X2, mRNA	0.63078217
CLCdnRY9_47567	1	1	11	29	uv|KC702186.1:1-274	116	134	Moderate	Moderate	Suspect[1,10];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase RFWD3 (LOC102580985), mRNA	0.759173345
CLCdnRY11_36424	1	1	5	20	uv|U09128.1:1-1663	951	936	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum diacylglycerol kinase 2 (LOC102603370), mRNA	0.632911392
SdnRY1_6190	1	1	2346	2362	uv|KF853602.1:1019-2932	1659	1675	Weak	Weak	Suspect[2363,2368];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592200 (LOC102592200), transcript variant X1, mRNA	0.675675676
CLCdnRY7_40468	1	1	2333	2348	uv|EF437940.1:7199-10690-48	2095	2110	Weak	Weak	Suspect[2349,2368];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604569 (LOC102604569), mRNA	0.633445946
CLCdnRY10_20065	1	1	11	26	uv|U67875.1:8796-9922	341	326	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum lycopersicum sulfate transporter 3.1-like (LOC101256192), mRNA	0.633981403
CLCdnRY10_38557	1	1	2328	2343	uv|EU048863.1:393-490	93	78	Weak	Weak	Suspect[2344,2362];	TRUE_BIOLOGICAL	6134	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585691 (LOC102585691), transcript variant X1, mRNA	0.635055038
CLCdnRY10_20591	1	1	2342	2357	uv|AF379854.1:4263-5841	689	674	Weak	Weak	Suspect[2358,2358];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum transmembrane 9 superfamily member 5 (LOC102598899), mRNA	0.636132316
PBdnRY1_13192	1	1	2328	2343	uv|EF694056.1:1-945	753	768	Weak	Weak	Suspect[2344,2350];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative cyclic nucleotide-gated ion channel 15 (LOC102583901), transcript variant X2, mRNA	0.638297872
CLCdnRY10_46523	1	1	6	21	uv|JF909482.1:3850-8059	493	478	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum vacuolar-sorting receptor 6-like (LOC102591192), mRNA	0.641299701
CLCdnRY10_496	1	1	2311	2326	uv|DQ317600.1:425-517	69	84	Weak	Weak	Suspect[2327,2338];	NO_DATA	1	1	PREDICTED: Solanum tuberosum adagio protein 3 (LOC102593553), mRNA	0.641573995
PBdnRY1_13259	1	1	3	18	uv|M28829.1:1-8684-49	1871	1886	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum interactor of constitutive active ROPs 3-like (LOC102600795), transcript variant X2, mRNA	0.641848524
CLCdnRY11_16722	1	1	2299	2314	uv|KF719018.1:2199-2810	543	558	Weak	Weak	Suspect[2315,2336];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum ACT domain-containing protein ACR3 (LOC102587087), transcript variant X1, mRNA	0.642123288
PBdnRY1_3356	1	1	11	26	uv|AF061923.1:29-1852	773	788	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum cysteine-rich receptor-like protein kinase 10 (LOC102603268), transcript variant X2, mRNA	0.642123288
SdnRY1_6464	1	1	18	33	uv|J02459.1:1-48502-49	48108	48123	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch11, complete genome	0.642398287
CLCdnRY10_5015	1	1	2312	2327	uv|AF379854.1:3-2710	684	699	Weak	Weak	Suspect[2328,2334];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581459 (LOC102581459), mRNA	0.642673522
PBdnRY1_10517	1	1	15	30	uv|KF718996.1:2914-4532	922	907	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	0.644053242
CLCdnRY10_57591	1	1	2299	2315	uv|AB248920.1:3947-4044	57	41	Weak	Weak	Suspect[2316,2328];	NO_DATA	1	1	PREDICTED: Solanum tuberosum homeobox-leucine zipper protein ATHB-15 (LOC102589714), mRNA	0.687285223
CLCdnRY10_40557	1	1	2302	2317	uv|AF379854.1:3-2710	1692	1677	Weak	Weak	Suspect[2318,2326];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum ABC transporter B family member 29, chloroplastic (LOC102600536), transcript variant X2, mRNA	0.644883921
CLCdnRY4_9023	1	1	14	29	uv|LC029925.1:8436-8631	145	160	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ribosome biogenesis protein BOP1 homolog (LOC102596556), mRNA	0.64516129
CLCdnRY1_6356	1	1	1	17	uv|U02436.1:3152-4436	547	563	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum tetratricopeptide repeat protein 7A-like (LOC102589751), transcript variant X2, mRNA	0.688764529
SdnRY1_6567	1	1	2302	2318	uv|JF909467.1:4676-4959	211	195	Weak	Weak	Suspect[2319,2322];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable polyamine transporter At1g31830 (LOC102597466), mRNA	0.689061154
CLCdnRY11_22668	1	1	2289	2304	uv|M34305.1:3197-4538	761	776	Weak	Weak	Suspect[2305,2316];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599911 (LOC102599911), transcript variant X1, mRNA	0.647668394
CLCdnRY10_18550	1	1	20	35	uv|JQ927446.1:4885-6835-49	262	277	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase STY46-like (LOC102578502), mRNA	0.650477016
SdnRY1_6800	1	1	10	25	uv|AF379854.1:3-2710	1677	1692	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum ABC transporter B family member 29, chloroplastic (LOC102600536), transcript variant X2, mRNA	0.65416485
PBdnRY1_8915	1	1	22	37	uv|AY753578.1:1-838	210	195	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	6181	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 18 (LOC102595733), transcript variant X3, mRNA	0.655307995
PBdnRY1_8915	1	1	2274	2289	uv|M77169.1:820-5161	3482	3497	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 18 (LOC102595733), transcript variant X3, mRNA	0.655307995
CLCdnRY1_4578	1	1	5	20	uv|KF718989.1:2199-3181	375	390	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum protein TIC 100 (LOC102591560), mRNA	0.658183414
SdnRY1_7056	1	1	2244	2259	uv|DQ839632.1:2694-2846	33	18	Weak	Weak	Suspect[2260,2264];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600866 (LOC102600866), mRNA	0.66254417
CLCdnRY10_42888	1	1	11	26	uv|U29899.1:1847-4463	1928	1943	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum transcriptional adapter ADA2-like (LOC102600148), transcript variant X1, mRNA	0.663129973
CLCdnRY10_11325	1	1	2239	2254	uv|AY568055.1:6692-7837	407	422	Weak	Weak	Suspect[2255,2258];	NO_DATA	1	1	PREDICTED: Solanum tuberosum diacylglycerol O-acyltransferase 1 (LOC102593515), mRNA	0.664304694
CLCdnRY9_18564	1	1	7	23	uv|KF853601.1:1021-3588	1196	1180	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase UPL3-like (LOC102603044), mRNA	0.710164225
CLCdnRY10_20024	1	1	2220	2235	uv|M77169.1:820-5161	1633	1648	Weak	Weak	Suspect[2236,2239];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g39710 (LOC102602481), transcript variant X16, mRNA	0.669941938
CLCdnRY10_5775	1	1	2192	2207	uv|AF327712.1:1582-7289	2727	2712	Weak	Weak	Suspect[2208,2231];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum uncharacterized LOC102601271 (LOC102601271), mRNA	0.67234424
CLCdnRY12_55944	1	1	2205	2220	uv|Z46234.1:1-402	183	198	Weak	Weak	Suspect[2221,2229];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum GTPase Der (LOC102603077), mRNA	0.67294751
PBdnRY1_3354	1	1	8	23	uv|AF061923.1:29-1852	773	788	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum cysteine-rich receptor-like protein kinase 10 (LOC102603268), transcript variant X2, mRNA	0.67294751
CLCdnRY12_1235	1	1	2198	2213	uv|KC702182.1:1-1023	386	371	Weak	Weak	Suspect[2214,2228];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 8-like (LOC102605476), transcript variant X2, mRNA	0.673249551
CLCdnRY11_395	1	1	2181	2202	uv|GU593054.1:1-1305	596	575	Weak	Weak	Suspect[2203,2223];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum ferric reduction oxidase 8, mitochondrial (LOC102579721), mRNA	0.944669366
CLCdnRY10_27761	1	1	5	20	uv|L07041.1:673-1123	410	395	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	Solanum pennellii chromosome ch10, complete genome	0.674763833
SdnRY1_7495	1	1	18	33	uv|KF718978.1:2204-3575	1130	1115	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC102582520), mRNA	0.675067507
SdnRY1_7527	1	1	18	33	uv|KF718978.1:2204-3575	1130	1115	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC102586051), mRNA	0.675980171
SdnRY1_7528	1	1	18	33	uv|KF718978.1:2204-3575	1130	1115	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC102586051), mRNA	0.675980171
CLCdnRY1_15293	1	1	2194	2210	uv|M36473.1:42-140	23	39	Weak	Weak	Suspect[2211,2216];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein SIEVE ELEMENT OCCLUSION B-like (LOC102598958), mRNA	0.722021661
CLCdnRY11_59469	1	1	15	30	uv|JQ394800.1:4781-4893	6	21	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum early endosome antigen 1 (LOC102595671), mRNA	0.67904029
SdnRY1_7634	1	1	2184	2200	uv|AF129072.1:907-3477	1715	1731	Weak	Weak	Suspect[2201,2208];	NO_DATA	1	1	PREDICTED: Solanum pennellii disease resistance protein RPP13-like (LOC107017953), transcript variant X5, mRNA	0.724637681
CLCdnRY10_11749	1	1	10	25	uv|AF379854.1:3-2710	1855	1870	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum probable ribose-5-phosphate isomerase 4, chloroplastic (LOC102580638), mRNA	0.679963735
SdnRY1_7697	1	1	1	16	uv|AF379854.1:3-2710	624	609	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589186 (LOC102589186), mRNA	0.68119891
SdnRY1_7720	1	1	20	35	uv|DQ317694.1:4194-4289	59	74	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum transmembrane 9 superfamily member 11 (LOC102594493), mRNA	0.68212824
PBdnRY1_7352	1	1	4	25	uv|KY031737.1:1-5023	1374	1395	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590400 (LOC102590400), mRNA	0.957592339
PBdnRY1_4598	1	1	2159	2175	uv|M77169.1:820-5161	3745	3761	Weak	Weak	Suspect[2176,2181];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum UPF0051 protein ABCI8, chloroplastic-like (LOC102590382), mRNA	0.733608436
CLCdnRY1_21621	1	1	22	37	uv|JF909482.1:3850-8059	556	571	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586773 (LOC102586773), transcript variant X1, mRNA	0.692520776
CLCdnRY7_9330	1	1	25	40	uv|U02450.1:1638-1736	33	48	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum regulator of nonsense transcripts 1 homolog (LOC102580894), mRNA	0.692840647
CLCdnRY10_13519	1	1	2139	2155	uv|M36473.1:348-476	39	55	Weak	Weak	Suspect[2156,2164];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ruBisCO large subunit-binding protein subunit alpha, chloroplastic-like (LOC102587813), mRNA	0.739371534
CLCdnRY12_51000	1	1	15	30	uv|U09365.1:5556-6239	320	305	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602270 (LOC102602270), transcript variant X2, mRNA	0.694123091
CLCdnRY10_47988	1	1	16	31	uv|AF310136.1:497-2034	1229	1214	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum galactose oxidase-like (LOC102579139), mRNA	0.695088044
PBdnRY1_3850	1	1	16	31	uv|FJ931533.1:7978-12753-49	2759	2774	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	7147	1	PREDICTED: Solanum tuberosum nicotinate phosphoribosyltransferase 1-like (LOC102592075), transcript variant X1, mRNA	0.695410292
PBdnRY1_424	1	1	2123	2138	uv|LC121520.1:4666-4763	17	2	Weak	Weak	Suspect[2139,2156];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum acetate/butyrate--CoA ligase AAE7, peroxisomal-like (LOC102603540), mRNA	0.695732839
CLCdnRY10_35257	1	1	25	40	uv|J02482.1:1-5386-49	2631	2616	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum cleavage and polyadenylation specificity factor subunit 6 (LOC102599228), transcript variant X2, mRNA	0.697026022
CLCdnRY8_52192	1	1	9	25	uv|KF718979.1:2206-6730	2405	2421	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum BTB/POZ domain-containing protein FBL11 (LOC102593060), transcript variant X3, mRNA	0.745920746
CLCdnRY10_46874	1	1	2115	2131	uv|LC121522.1:1731-1818	31	47	Weak	Weak	Suspect[2132,2142];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable arabinosyltransferase ARAD1 (LOC102600233), transcript variant X1, mRNA	0.746965453
CLCdnRY8_7	1	1	3	18	uv|KF718989.1:2199-3181	125	110	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum protein EARLY FLOWERING 3-like (LOC102581245), mRNA	0.700280112
PBdnRY1_10141	1	1	4	19	uv|U09476.1:1-864	205	190	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	581	1	PREDICTED: Solanum tuberosum hsp70-Hsp90 organizing protein 2-like (LOC102583884), mRNA	0.700280112
CLCdnRY10_19340	1	1	2116	2131	uv|X06779.1:1-4734	4630	4615	Weak	Weak	Suspect[2132,2141];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like (LOC102601978), mRNA	0.700607193
CLCdnRY1_21374	1	1	2087	2102	uv|U89929.1:4416-4519	47	32	Weak	Weak	Suspect[2103,2122];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein arginine N-methyltransferase 1.5 (LOC102597573), transcript variant X2, mRNA	0.706880302
CLCdnRY10_31301	1	1	3	18	uv|KF718979.1:2206-6730	3719	3704	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum flap endonuclease GEN-like 1 (LOC102595702), mRNA	0.70754717
CLCdnRY7_37227	1	1	17	32	uv|M34305.1:3197-4538	376	361	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum callose synthase 7-like (LOC102602725), transcript variant X2, mRNA	0.708215297
CLCdnRY11_51414	1	1	2077	2092	uv|U02447.1:1-1009	678	663	Weak	Weak	Suspect[2093,2116];	TRUE_BIOLOGICAL	186765	1	PREDICTED: Solanum tuberosum uncharacterized LOC102601384 (LOC102601384), transcript variant X4, mRNA	0.708884688
SdnRY1_8553	1	1	1	702	uv|HQ245711.1:13692-16404	1920	2621	Strong	Strong	None	NO_DATA	1	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	33.14420804
SdnRY1_8553	1	1	1485	2114	uv|DQ996013.1:2087-3053	673	44	Strong	Strong	None	TRUE_BIOLOGICAL	620	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	29.73995272
SdnRY1_8553	1	1	654	1001	uv|EF437940.1:3516-6082	2567	2221	Strong	Strong	None	NO_DATA	1	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	16.40661939
SdnRY1_8553	1	1	1021	1355	uv|NGB00024.1:1275-1702	94	428	Strong	Strong	None	TRUE_BIOLOGICAL	91347	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	15.79196217
SdnRY1_8553	1	1	1247	1386	uv|NGB00034.1:2015-2210	57	196	Strong	Strong	None	TRUE_BIOLOGICAL	620	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	6.572104019
SdnRY1_8553	1	1	1019	1142	uv|M36415.1:190-390	122	1	Strong	Strong	None	TRUE_BIOLOGICAL	91347	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	5.815602837
SdnRY1_8553	1	1	1307	1422	uv|DQ996013.1:2087-3053	910	795	Strong	Strong	None	TRUE_BIOLOGICAL	620	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	5.437352246
SdnRY1_8553	1	1	2015	2115	uv|NGB00024.1:2421-2631	1	101	Strong	Strong	None	TRUE_BIOLOGICAL	620	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	4.728132388
SdnRY1_8553	1	1	1000	1069	uv|U75323.1:1187-1308	70	1	Strong	Strong	None	TRUE_BIOLOGICAL	91347	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	3.262411348
CLCdnRY10_19584	1	1	12	27	uv|KC702192.1:1-523	437	422	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable xyloglucan 6-xylosyltransferase 5 (LOC102578957), mRNA	0.709219858
CLCdnRY4_19323	1	1	2068	2090	uv|AF379854.1:3-2710	469	491	Weak	Weak	Suspect[2091,2113];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum GATA transcription factor 26-like (LOC102598680), transcript variant X1, mRNA	1.041173687
CLCdnRY6_6840	1	1	2094	2111	uv|JN874481.1:57-2095	1298	1315	Weak	Weak	Suspect[2112,2113];	TRUE_BIOLOGICAL	86599	1	PREDICTED: Solanum tuberosum protein LEO1 homolog (LOC102594311), transcript variant X1, mRNA	0.804543303
CLCdnRY10_41879	1	1	11	27	uv|NGB00680.1:1-53	32	16	Weak	Weak	Suspect[1,10];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum guard cell S-type anion channel SLAC1 (LOC102583824), mRNA	0.75865339
PBdnRY1_1865	1	1	2070	2085	uv|J02459.1:1-48502-49	971	956	Weak	Weak	Suspect[2086,2109];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum pennellii scarecrow-like protein 11 (LOC107004392), transcript variant X2, mRNA	0.711237553
CLCdnRY10_23472	1	1	2078	2099	uv|U67875.1:6835-8216	420	399	Weak	Weak	Suspect[2101,2108];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase PEPKR2 (LOC102590903), mRNA	0.996204934
CLCdnRY10_23472	1	1	2085	2100	uv|U02427.1:2631-2729	18	33	Weak	Weak	Suspect[2101,2108];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase PEPKR2 (LOC102590903), mRNA	0.711574953
CLCdnRY10_67205	1	1	2079	2094	uv|M34298.1:3143-4604	628	643	Weak	Weak	Suspect[2095,2104];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum switch 2 (LOC102603050), mRNA	0.712927757
CLCdnRY10_8102	1	1	2061	2078	uv|NGB00587.1:1-3232	1205	1222	Weak	Weak	Suspect[2079,2100];	NO_DATA	1	1	PREDICTED: Solanum tuberosum vacuolar cation/proton exchanger 3-like (LOC102581932), transcript variant X1, mRNA	0.80952381
PBdnRY1_5331	1	1	2064	2079	uv|KC702206.1:1-523	391	376	Weak	Weak	Suspect[2080,2098];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum protein indeterminate-domain 4, chloroplastic-like (LOC102591583), transcript variant X2, mRNA	0.714966635
CLCdnRY9_19747	1	1	2075	2092	uv|U02450.1:497-595	79	96	Weak	Weak	Suspect[2093,2096];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum protein indeterminate-domain 2-like (LOC102594833), mRNA	0.811068702
PBdnRY1_6639	1	1	2052	2067	uv|AF379854.1:3-2710	709	694	Weak	Weak	Suspect[2068,2090];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum cyclin-D1-1 (LOC102605668), mRNA	0.717703349
VdnRY2_5313	1	1	762	1911	uv|J02482.1:1-5386-49	3511	2362	Strong	Strong	None	TRUE_BIOLOGICAL	10842	1	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	55.02873563
VdnRY2_5313	1	1	1	761	uv|J02482.1:1-5386-49	4240	3480	Strong	Strong	None	TRUE_BIOLOGICAL	10842	1	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	36.39846743
VdnRY2_5313	1	1	1911	2088	uv|J02482.1:1-5386-49	2586	2409	Strong	Strong	None	TRUE_BIOLOGICAL	10842	1	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	8.477011494
SdnRY1_8835	1	1	15	31	uv|NGB00055.1:1-1950	1665	1681	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum probable WRKY transcription factor 4 (LOC102593360), transcript variant X3, mRNA	0.767018217
CLCdnRY1_24625	1	1	2063	2079	uv|FJ160466.1:1899-7260-49	3487	3471	Weak	Weak	Suspect[2080,2081];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC107057663 (LOC107057663), mRNA	0.768861124
CLCdnRY10_13095	1	1	3	18	uv|U30497.1:3230-4814	1281	1296	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ubiquitin domain-containing protein DSK2b-like (LOC102605490), mRNA	0.720807304
CLCdnRY10_28396	1	1	10	25	uv|HM640258.1:3280-3468	69	84	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum TMV resistance protein N-like (LOC102606069), transcript variant X2, mRNA	0.722891566
SdnRY1_8990	1	1	18	35	uv|KM407512.1:886-4985	2434	2451	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized protein YqeH (LOC102587969), mRNA	0.82046332
CLCdnRY10_15481	1	1	21	36	uv|LC121524.1:2980-3796	173	188	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized protein DDB_G0292642-like (LOC102581264), mRNA	0.724987917
CLCdnRY3_15620	1	1	19	34	uv|LC121524.1:2980-3796	173	188	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized protein DDB_G0292642-like (LOC102581264), mRNA	0.725689405
SdnRY1_9066	1	1	2032	2047	uv|L08860.1:1-1129	201	186	Weak	Weak	Suspect[2048,2066];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum beta-amylase 3, chloroplastic-like (LOC102594291), mRNA	0.726040658
CLCdnRY6_2945	1	1	2033	2049	uv|NGB00055.1:1-1950	1681	1665	Weak	Weak	Suspect[2050,2063];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum probable WRKY transcription factor 4 (LOC102593360), transcript variant X2, mRNA	0.775569559
CLCdnRY7_19589	1	1	2028	2043	uv|EU360889.1:4417-6776-46	869	884	Weak	Weak	Suspect[2044,2059];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102605986 (LOC102605986), mRNA	0.728508985
SdnRY1_9157	1	1	2029	2044	uv|KF853601.1:1021-3588	1583	1568	Weak	Weak	Suspect[2045,2058];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum WD repeat-containing protein 26-like (LOC102604387), mRNA	0.728862974
SdnRY1_9153	1	1	9	24	uv|JN204883.1:1-1492	1365	1350	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum tuberosum FRIGIDA-like protein 3 (LOC102591999), mRNA	0.728862974
SdnRY1_9173	1	1	9	24	uv|JN204883.1:1-1492	1365	1350	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum tuberosum FRIGIDA-like protein 3 (LOC102591999), mRNA	0.729217307
CLCdnRY2_3827	1	1	1380	1418	uv|JN874480.1:6795-9434	90	52	Strong	Strong	None	TRUE_BIOLOGICAL	4107	1	PREDICTED: Solanum tuberosum granule-bound starch synthase (GBSS), transcript variant X5, mRNA	1.856375183
CLCdnRY2_3827	1	1	1350	1380	uv|JN874480.1:6795-9434	212	182	Strong	Strong	None	TRUE_BIOLOGICAL	4107	1	PREDICTED: Solanum tuberosum granule-bound starch synthase (GBSS), transcript variant X5, mRNA	1.465559355
PBdnRY1_316	1	1	2019	2034	uv|M77169.1:820-5161	3195	3180	Weak	Weak	Suspect[2035,2047];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602270 (LOC102602270), transcript variant X2, mRNA	0.732779678
CLCdnRY9_43098	1	1	2006	2021	uv|V00604.2:1-6407-49	1238	1223	Weak	Weak	Suspect[2022,2045];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581574 (LOC102581574), transcript variant X1, mRNA	0.733496333
SdnRY1_9305	1	1	2025	2040	uv|DQ839632.1:2694-2846	33	18	Weak	Weak	Suspect[2041,2045];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600866 (LOC102600866), mRNA	0.733496333
CLCdnRY12_51737	1	1	21	36	uv|JF909481.1:3855-5640	1089	1104	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum BRCT domain-containing protein At4g02110-like (LOC102603882), mRNA	0.733855186
SdnRY1_9345	1	1	22	38	uv|L08860.1:1-1129	144	128	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 2.10-like (LOC102604766), mRNA	0.783545544
CLCdnRY4_5395	1	1	2003	2018	uv|AF327712.1:1582-7289	2727	2712	Weak	Weak	Suspect[2019,2042];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum uncharacterized LOC102601271 (LOC102601271), mRNA	0.734573947
SdnRY1_9346	1	1	4	19	uv|JQ927446.1:4885-6835-49	1561	1546	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum pennellii FHA domain-containing protein DDL (LOC107002665), mRNA	0.734573947
CLCdnRY1_5234	1	1	2010	2025	uv|Z50149.1:1824-1918	66	51	Weak	Weak	Suspect[2026,2041];	NO_DATA	1	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase KEG (LOC102602127), transcript variant X3, mRNA	0.734933856
CLCdnRY11_38691	1	1	2004	2019	uv|JN874480.1:1050-2714	498	513	Weak	Weak	Suspect[2020,2036];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589452 (LOC102589452), mRNA	0.736738703
SdnRY1_9402	1	1	2010	2025	uv|M77815.1:2171-2269	57	42	Weak	Weak	Suspect[2026,2036];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable mitochondrial-processing peptidase subunit beta-like (MPP), transcript variant X1, mRNA	0.736738703
SdnRY1_9432	1	1	11	26	uv|JF909481.1:3855-5640	839	824	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586185 (LOC102586185), transcript variant X1, mRNA	0.737463127
CLCdnRY5_27091	1	1	13	28	uv|AF379854.1:3-2710	1619	1634	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587704 (LOC102587704), transcript variant X2, mRNA	0.740375123
PBdnRY1_3024	1	1	2001	2016	uv|KC702231.1:1-1021	903	918	Weak	Weak	Suspect[2017,2025];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 (LOC102577899), mRNA	0.740740741
SdnRY1_9550	1	1	2001	2016	uv|JX560397.1:83-5970	2394	2409	Weak	Weak	Suspect[2017,2024];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At3g59040 (LOC102605894), transcript variant X1, mRNA	0.741106719
CLCdnRY10_28960	1	1	1993	2008	uv|AF379854.1:3-2710	2129	2144	Weak	Weak	Suspect[2009,2024];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599243 (LOC102599243), transcript variant X5, mRNA	0.741106719
SdnRY1_9608	1	1	22	38	uv|L08860.1:1-1129	144	128	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 2.10-like (LOC102604766), mRNA	0.791687284
CLCdnRY6_31440	1	1	24	39	uv|KF718978.1:2204-3575	399	384	Weak	Weak	Suspect[1,23];Suspect[2021,2021];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum transmembrane 9 superfamily member 5 (LOC102598899), mRNA	0.742206828
CLCdnRY6_31440	1	1	2005	2020	uv|AF379854.1:4263-5841	689	674	Weak	Weak	Suspect[1,23];Suspect[2021,2021];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum transmembrane 9 superfamily member 5 (LOC102598899), mRNA	0.742206828
SdnRY1_9656	1	1	15	30	uv|X70481.1:3564-4492	282	297	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum metal transporter Nramp2-like (LOC102602058), mRNA	0.743310208
CLCdnRY2_3783	1	1	1991	2006	uv|L08862.1:1-2039	1027	1042	Weak	Weak	Suspect[2007,2014];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At3g04760, chloroplastic (LOC102586548), mRNA	0.744786495
CLCdnRY12_522	1	1	4	19	uv|U59231.1:5103-7490	2088	2103	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	5658	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604966 (LOC102604966), mRNA	0.746268657
CLCdnRY7_38736	1	1	1984	1999	uv|NGB00413.1:4732-7508	1985	1970	Weak	Weak	Suspect[2000,2002];	TRUE_BIOLOGICAL	12103	1	PREDICTED: Solanum tuberosum carboxyl-terminal-processing peptidase 2, chloroplastic (LOC102593670), transcript variant X1, mRNA	0.749250749
CLCdnRY12_65333	1	1	1981	1996	uv|X53127.1:443-904	421	406	Weak	Weak	Suspect[1997,2000];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial (LOC102604609), transcript variant X1, mRNA	0.75
CLCdnRY12_19918	1	1	1981	1996	uv|KY031724.1:1-5301	716	701	Weak	Weak	Suspect[1997,1998];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592520 (LOC102592520), transcript variant X2, mRNA	0.750750751
SdnRY1_9931	1	1	1	17	uv|KP057689.1:1-859	306	290	Weak	Weak	None	TRUE_BIOLOGICAL	84111	1	PREDICTED: Solanum tuberosum tonoplast dicarboxylate transporter (LOC102594902), mRNA	0.801201803
CLCdnRY10_4128	1	1	1971	1986	uv|JN581374.1:616-2149	308	293	Weak	Weak	Suspect[1987,1996];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum isocitrate dehydrogenase [NADP] (LOC101255848), mRNA	0.751503006
SdnRY1_10038	1	1	5	21	uv|M34298.1:3143-4604	572	588	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	6237	1	Solanum pennellii chromosome ch05, complete genome	0.804424334
SdnRY1_10052	1	1	10	25	uv|KF719005.1:2205-5132	2275	2290	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum pennellii cytochrome P450 89A2-like (LOC107015201), mRNA	0.754527163
CLCdnRY1_21749	1	1	17	33	uv|NGB00587.1:1-3232	2057	2073	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum U-box domain-containing protein 30-like (LOC102584974), mRNA	0.805639476
CLCdnRY5_6962	1	1	7	22	uv|JF909482.1:3850-8059	2345	2360	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum probable inactive purple acid phosphatase 1 (LOC102584747), transcript variant X1, mRNA	0.755287009
PBdnRY1_7052	1	1	7	22	uv|L05083.1:2309-2762	224	209	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102591705 (LOC102591705), mRNA	0.755667506
CLCdnRY11_13790	1	1	16	31	uv|J02400.1:1-5243-49	5013	4998	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum rho GTPase-activating protein 5-like (LOC102599543), mRNA	0.756048387
CLCdnRY10_1998	1	1	1	16	uv|U89960.1:3-1162	601	616	Weak	Weak	None	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum ankyrin repeat-containing protein At3g12360 (LOC102597721), mRNA	0.756811302
CLCdnRY6_31082	1	1	23	39	uv|JN204887.1:1-998	345	361	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum transmembrane 9 superfamily member 1 (LOC102600734), mRNA	0.808489136
SdnRY1_10162	1	1	1964	1979	uv|U09128.1:3334-10218	830	815	Weak	Weak	None	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum cytochrome P450 CYP72A219-like (LOC102583853), misc_RNA	0.757958565
CLCdnRY12_13831	1	1	16	31	uv|J02400.1:1-5243-49	5013	4998	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum rho GTPase-activating protein 5-like (LOC102599543), mRNA	0.759878419
SdnRY1_10320	1	1	18	36	uv|JQ927446.1:4885-6835-49	702	684	Moderate	Moderate	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602405 (LOC102602405), mRNA	0.915099136
CLCdnRY10_10197	1	1	1945	1960	uv|J02459.1:1-48502-49	8349	8364	Weak	Weak	Suspect[1961,1965];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581582 (LOC102581582), transcript variant X4, mRNA	0.763358779
CLCdnRY9_25708	1	1	2	17	uv|U14124.1:3579-3677	88	73	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum F-box/FBD/LRR-repeat protein At1g13570-like (LOC102589901), transcript variant X1, mRNA	0.764525994
CLCdnRY10_23913	1	1	8	24	uv|KM407512.1:886-4985	3237	3253	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum cysteine--tRNA ligase, chloroplastic/mitochondrial (LOC102604325), transcript variant X1, mRNA	0.81591025
CLCdnRY8_22253	1	1	1922	1937	uv|GU593054.1:6136-8806	2100	2115	Weak	Weak	Suspect[1938,1961];	NO_DATA	1	1	PREDICTED: Solanum tuberosum myosin-6 (LOC102584489), transcript variant X2, mRNA	0.764915859
CLCdnRY10_7371	1	1	20	35	uv|V00604.2:1-6407-49	4714	4729	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum AP-1 complex subunit mu-2 (LOC102589986), mRNA	0.766871166
CLCdnRY11_36636	1	1	20	35	uv|U29899.1:4697-5948	455	440	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum sodium/hydrogen exchanger 2-like (LOC102578176), transcript variant X1, mRNA	0.767263427
CLCdnRY10_25681	1	1	24	39	uv|KC702165.1:1-1023	636	651	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable indole-3-acetic acid-amido synthetase GH3.5 (LOC102581789), mRNA	0.768836494
CLCdnRY11_26138	1	1	23	38	uv|KC702165.1:1-1023	636	651	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable indole-3-acetic acid-amido synthetase GH3.5 (LOC102581789), mRNA	0.769230769
CLCdnRY10_30303	1	1	4	24	uv|DQ666273.1:28-245	114	134	Moderate	Moderate	Suspect[1,3];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum homeobox protein ATH1 (LOC102600209), mRNA	1.026694045
CLCdnRY9_40921	1	1	18	33	uv|J01783.1:4575-7894-49	1593	1608	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	724	1	PREDICTED: Solanum tuberosum fatty acid amide hydrolase-like (LOC102604577), transcript variant X1, mRNA	0.772002059
SdnRY1_10644	1	1	16	31	uv|L24193.1:269-372	56	41	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cytochrome P450 CYP72A219-like (LOC102583270), transcript variant X1, mRNA	0.772002059
CLCdnRY12_31440	1	1	1911	1930	uv|AF092169.1:1974-2153	97	78	Moderate	Moderate	Suspect[1931,1941];	NO_DATA	1	1	Solanum tuberosum clone RHPOTKEY021H18, complete sequence	0.978876868
SdnRY1_10885	1	1	16	31	uv|L24193.1:269-372	56	41	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cytochrome P450 CYP72A219-like (LOC102583270), transcript variant X1, mRNA	0.778816199
SdnRY1_10943	1	1	1902	1917	uv|AY217101.1:3918-4201	199	214	Weak	Weak	Suspect[1920,1921];	NO_DATA	1	1	PREDICTED: Solanum pennellii extensin-2-like (LOC107007427), mRNA	0.780843311
SdnRY1_10943	1	1	1904	1919	uv|U55760.1:1-2749	2324	2309	Weak	Weak	Suspect[1920,1921];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum pennellii extensin-2-like (LOC107007427), mRNA	0.780843311
SdnRY1_11082	1	1	11	27	uv|JQ927446.1:4885-6835-49	1836	1820	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum alpha-amylase-like (LOC102582328), transcript variant X1, mRNA	0.837696335
CLCdnRY1_27975	1	1	1879	1894	uv|M16192.1:1-2517-49	758	773	Weak	Weak	Suspect[1895,1910];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum dolichol kinase EVAN (LOC102589990), mRNA	0.785340314
CLCdnRY12_49510	1	1	1885	1900	uv|DQ391279.1:1-10285	9086	9101	Weak	Weak	Suspect[1901,1909];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum receptor-like cytosolic serine/threonine-protein kinase RBK1 (LOC102601171), mRNA	0.785751702
CLCdnRY9_6544	1	1	1877	1892	uv|M16217.1:1-2529	1934	1949	Weak	Weak	Suspect[1893,1909];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum Na(+)/H(+) antiporter NhaD (LOC102582538), mRNA	0.785751702
CLCdnRY10_14089	1	1	1873	1888	uv|AF379854.1:3-2710	693	678	Weak	Weak	Suspect[1889,1908];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum cyclin-dependent kinase D-3-like (LOC102591981), mRNA	0.786163522
PBdnRY1_6605	1	1	24	39	uv|KF853601.1:1021-3588	523	508	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum cyclic dof factor 1 (LOC102603307), transcript variant X1, mRNA	0.786163522
CLCdnRY2_28624	1	1	1867	1882	uv|U89671.1:6765-6860-49	92	107	Weak	Weak	Suspect[1883,1903];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589452 (LOC102589452), mRNA	0.788229112
SdnRY1_11221	1	1	9	25	uv|L08935.1:7553-7651	19	3	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum serine carboxypeptidase-like 17 (LOC107062459), mRNA	0.842105263
SdnRY1_11259	1	1	1878	1893	uv|AF379854.1:4263-5841	687	672	Weak	Weak	Suspect[1894,1898];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum zinc finger protein NUTCRACKER (LOC102588795), mRNA	0.790305585
SdnRY1_11296	1	1	16	31	uv|M28248.1:1-1709	1017	1032	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584135 (LOC102584135), mRNA	0.791139241
CLCdnRY9_22565	1	1	25	40	uv|GU827641.1:3560-3611	24	9	Weak	Weak	Suspect[1,24];Suspect[1875,1894];	NO_DATA	1	1	PREDICTED: Solanum tuberosum NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 homolog (LOC102586949), mRNA	0.791974657
CLCdnRY9_22565	1	1	1859	1874	uv|KC702183.1:1-1023	754	739	Weak	Weak	Suspect[1,24];Suspect[1875,1894];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 homolog (LOC102586949), mRNA	0.791974657
SdnRY1_11379	1	1	9	25	uv|L08935.1:7553-7651	19	3	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum serine carboxypeptidase-like 17 (LOC107062459), mRNA	0.847457627
SdnRY1_11408	1	1	1863	1878	uv|DQ391279.1:1-10285	9086	9101	Weak	Weak	Suspect[1879,1887];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum receptor-like cytosolic serine/threonine-protein kinase RBK1 (LOC102601171), mRNA	0.79491256
CLCdnRY10_27210	1	1	4	19	uv|M16217.1:1-2529	167	182	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein ZINC INDUCED FACILITATOR-LIKE 1-like (LOC102592224), transcript variant X3, mRNA	0.79787234
CLCdnRY3_9466	1	1	12	27	uv|U13860.1:6124-7626-49	988	1003	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	140052	1	PREDICTED: Solanum tuberosum OBERON-like protein (LOC102590088), transcript variant X1, mRNA	0.79787234
CLCdnRY4_28658	1	1	17	32	uv|AF379854.1:3-2710	2144	2129	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599243 (LOC102599243), transcript variant X5, mRNA	0.79787234
CLCdnRY4_23796	1	1	1860	1875	uv|GU593054.1:6136-8806	1258	1273	Weak	Weak	Suspect[1876,1879];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602141 (LOC102602141), transcript variant X1, mRNA	0.798296966
CLCdnRY3_30497	1	1	20	35	uv|J02400.1:1-5243-49	442	427	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599009 (LOC102599009), mRNA	0.798722045
CLCdnRY12_5769	1	1	1844	1859	uv|DQ391279.1:1-10285	5722	5737	Weak	Weak	Suspect[1860,1874];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable galacturonosyltransferase 6 (LOC102594635), mRNA	0.800426894
SdnRY1_11614	1	1	9	25	uv|L08935.1:7553-7651	19	3	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum serine carboxypeptidase-like 17 (LOC107062459), mRNA	0.85515767
CLCdnRY12_32356	1	1	1	30	uv|KC702186.1:1-274	263	234	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii protein IQ-DOMAIN 1-like (LOC107002416), transcript variant X2, mRNA	1.550802139
SdnRY1_11700	1	1	9	25	uv|L08935.1:7553-7651	19	3	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum serine carboxypeptidase-like 11 (LOC102593169), mRNA	0.858369099
CLCdnRY12_64856	1	1	16	31	uv|EF036511.1:4805-4933	29	44	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative pectinesterase/pectinesterase inhibitor 22 (LOC102586789), mRNA	0.805585392
CLCdnRY6_14465	1	1	1829	1846	uv|JF909482.1:3850-8059	1592	1609	Weak	Weak	Suspect[1847,1859];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum probable serine/threonine-protein kinase At5g41260 (LOC102585985), mRNA	0.914470145
CLCdnRY12_3001	1	1	21	36	uv|Z50120.1:1215-5191	2630	2615	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum uncharacterized protein At5g03900, chloroplastic (LOC102601987), mRNA	0.806885422
PBdnRY1_7802	1	1	1829	1844	uv|X70481.1:3564-4492	287	272	Weak	Weak	Suspect[1845,1855];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 2.10-like (LOC102604766), mRNA	0.808625337
CLCdnRY10_27466	1	1	11	26	uv|GU339046.1:5854-6432-49	387	372	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum protein DETOXIFICATION 33-like (LOC102593116), mRNA	0.809935205
CLCdnRY10_46552	1	1	1817	1833	uv|EF694056.1:1-945	590	574	Weak	Weak	Suspect[1834,1848];	TRUE_BIOLOGICAL	33090	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At1g67720 (LOC102589391), mRNA	0.865800866
CLCdnRY10_29281	1	1	1810	1825	uv|M28248.1:1-1709	1481	1496	Weak	Weak	Suspect[1826,1847];	TRUE_BIOLOGICAL	153135	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g26790, mitochondrial (LOC102582865), transcript variant X6, misc_RNA	0.812127775
CLCdnRY8_25675	1	1	1806	1822	uv|J02482.1:1-5386-49	4622	4638	Weak	Weak	Suspect[1823,1844];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC102595414), mRNA	0.867678959
VdnRY7_1123	1	1	29	79	uv|JQ394799.1:1-1559	1214	1264	Strong	Strong	Suspect[1,28];	TRUE_BIOLOGICAL	286	1	Pseudomonas sp. MC1 plasmid KOPRI126573, complete sequence	2.712967987
CLCdnRY11_41235	1	1	4	19	uv|M28829.1:1-8684-49	2644	2659	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	561	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587417 (LOC102587417), mRNA	0.814332248
PBdnRY1_12716	1	1	1809	1824	uv|AY962893.1:2004-2563	158	143	Weak	Weak	Suspect[1825,1839];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum tuberosum F-box/LRR-repeat protein At5g63520-like (LOC102584415), mRNA	0.815660685
CLCdnRY12_24321	1	1	1807	1822	uv|AF379854.1:4263-5841	1043	1028	Weak	Weak	Suspect[1823,1837];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604829 (LOC102604829), mRNA	0.816548721
SdnRY1_12122	1	1	10	26	uv|NGB00055.1:1-1950	1185	1201	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum transcription factor TCP4 (LOC102593018), mRNA	0.872885979
SdnRY1_12191	1	1	23	39	uv|KF718979.1:2206-6730	4311	4327	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum geraniol 8-hydroxylase-like (LOC102594515), mRNA	0.87431694
CLCdnRY10_22369	1	1	1788	1805	uv|KF718995.1:2216-3853	131	148	Weak	Weak	Suspect[1806,1827];	NO_DATA	1	1	PREDICTED: Solanum tuberosum DNA-directed RNA polymerase III subunit RPC3 (LOC102597386), mRNA	0.930487137
PBdnRY1_9418	1	1	1810	1825	uv|KF680544.1:323-942	428	443	Weak	Weak	Suspect[1826,1827];	NO_DATA	1	1	PREDICTED: Solanum tuberosum root phototropism protein 2 (LOC102602517), mRNA	0.821018062
CLCdnRY1_23783	1	1	1793	1808	uv|KC503966.1:3364-3696-49	168	183	Weak	Weak	Suspect[1809,1823];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592885 (LOC102592885), mRNA	0.822819528
PBdnRY1_4260	1	1	14	29	uv|AF102576.1:10832-10921	47	62	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum calcium-dependent protein kinase 10-like (LOC102591452), mRNA	0.826901874
CLCdnRY8_33472	1	1	15	30	uv|JX310867.1:868-3760	2497	2482	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	1224	1	PREDICTED: Solanum tuberosum probable serine/threonine-protein kinase WNK10 (LOC102594076), transcript variant X2, mRNA	0.82735797
SdnRY1_12462	1	1	660	682	uv|KJ541672.1:2690-2839	51	73	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein FAF-like, chloroplastic (LOC107059098), mRNA	1.214128035
PBdnRY1_8239	1	1	10	25	uv|JQ394800.1:3352-3450	90	75	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum amino acid permease 3 (AAP2), mRNA	0.829646018
CLCdnRY12_15021	1	1	1780	1795	uv|KF718979.1:2206-6730	3093	3078	Weak	Weak	Suspect[1796,1803];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum cytochrome P450 CYP82D47-like (LOC102591317), mRNA	0.831946755
SdnRY1_12631	1	1	1779	1796	uv|DQ391279.1:1-10285	9954	9937	Weak	Weak	Suspect[1797,1801];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586667 (LOC102586667), mRNA	0.943920044
SdnRY1_12656	1	1	1770	1785	uv|GU593054.1:1-1305	559	544	Weak	Weak	Suspect[1786,1800];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum cytochrome P450 82C4-like (LOC102582216), mRNA	0.833333333
CLCdnRY12_20311	1	1	1771	1792	uv|FJ380061.1:3772-3921	57	78	Weak	Weak	Suspect[1793,1799];	TRUE_BIOLOGICAL	122277	1	PREDICTED: Solanum tuberosum alpha-L-fucosidase 1-like (LOC102600482), mRNA	1.167315175
CLCdnRY10_6158	1	1	25	42	uv|KC702169.1:1-808	114	131	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586098 (LOC102586098), mRNA	0.944969427
CLCdnRY12_62307	1	1	1761	1776	uv|X06779.1:1-4734	746	761	Weak	Weak	Suspect[1777,1799];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum B3 domain-containing protein Os01g0905400-like (LOC102580520), transcript variant X2, mRNA	0.833796554
CLCdnRY12_27358	1	1	1759	1775	uv|JN874480.1:6795-9434	2291	2307	Weak	Weak	Suspect[1776,1795];	TRUE_BIOLOGICAL	40674	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 (LOC102605532), mRNA	0.891364903
CLCdnRY10_5396	1	1	18	33	uv|GU933126.1:7522-7626	52	67	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102577737 (LOC102577737), mRNA	0.835654596
SdnRY1_12761	1	1	1771	1792	uv|FJ380061.1:3772-3921	57	78	Weak	Weak	Suspect[1793,1794];	TRUE_BIOLOGICAL	122277	1	PREDICTED: Solanum tuberosum alpha-L-fucosidase 1-like (LOC102600482), mRNA	1.170568562
CLCdnRY11_57410	1	1	21	36	uv|KC702183.1:1-1023	739	754	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 homolog (LOC102586949), mRNA	0.836120401
CLCdnRY8_8217	1	1	1	16	uv|U42371.1:920-1342	243	258	Weak	Weak	None	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592329 (LOC102592329), mRNA	0.836586726
PBdnRY1_1952	1	1	1757	1773	uv|U13843.1:1887-9923	6251	6267	Weak	Weak	Suspect[1774,1792];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum uncharacterized protein At5g49945 (LOC102595545), mRNA	0.892857143
CLCdnRY3_35926	1	1	13	28	uv|M35007.1:2730-3838	640	625	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum dnaJ homolog subfamily C member 21-like (LOC102591761), mRNA	0.837520938
SdnRY1_12830	1	1	7	23	uv|JN204885.1:1-763	309	325	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102595922 (LOC102595922), transcript variant X2, mRNA	0.893854749
CLCdnRY3_36871	1	1	1	16	uv|KF718979.1:2206-6730	4219	4234	Weak	Weak	None	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g57250, mitochondrial (LOC102585306), mRNA	0.837988827
SdnRY1_12907	1	1	24	45	uv|KC614689.1:1-590	154	133	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum F-box/kelch-repeat protein At3g23880-like (LOC102583436), transcript variant X1, mRNA	1.176470588
CLCdnRY10_17558	1	1	1	16	uv|J02459.1:1-48502-49	47168	47183	Weak	Weak	None	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum siroheme synthase (LOC102578636), mRNA	0.840336134
CLCdnRY12_80286	1	1	1	16	uv|KF718979.1:2206-6730	4310	4325	Weak	Weak	None	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum potassium channel SKOR (LOC102582312), mRNA	0.840336134
CLCdnRY8_18789	1	1	1755	1770	uv|NGB00055.1:1-1950	1827	1842	Weak	Weak	Suspect[1771,1783];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588790 (LOC102588790), transcript variant X4, mRNA	0.841278744
PBdnRY1_7473	1	1	1745	1760	uv|AF379854.1:3-2710	1534	1549	Weak	Weak	Suspect[1761,1783];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum elongation factor 1-alpha (LOC102600107), mRNA	0.841278744
SdnRY1_12952	1	1	1754	1770	uv|L08862.1:2848-3728-49	421	437	Weak	Weak	Suspect[1771,1782];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583946 (LOC102583946), mRNA	0.897867565
CLCdnRY6_36664	1	1	2	18	uv|KC702170.1:1-1957	1833	1849	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At1g18485-like (LOC102605842), mRNA	0.898371701
SdnRY1_12983	1	1	4	20	uv|DQ391279.1:1-10285	23	7	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum cytochrome P450 71A1-like (LOC102605423), mRNA	0.899381675
CLCdnRY11_24099	1	1	25	40	uv|GU827641.1:3560-3611	24	9	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 homolog (LOC102586949), mRNA	0.84317032
CLCdnRY1_4459	1	1	1751	1766	uv|Z29589.1:3211-4486	905	890	Weak	Weak	Suspect[1767,1778];	TRUE_BIOLOGICAL	4527	1	PREDICTED: Solanum tuberosum protein FREE1 (LOC102605585), mRNA	0.843644544
CLCdnRY10_44480	1	1	6	21	uv|KC702183.1:1-1023	905	920	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum protein PHYTOCHROME KINASE SUBSTRATE 4 (LOC102601310), mRNA	0.844119302
CLCdnRY11_17456	1	1	14	29	uv|DQ092493.1:8086-8184	78	63	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum ACT domain-containing protein ACR4-like (LOC102581080), transcript variant X1, mRNA	0.844594595
CLCdnRY11_12082	1	1	1748	1763	uv|KY031737.1:7306-7320-49	41	56	Weak	Weak	Suspect[1764,1776];	NO_DATA	1	1	Homo sapiens BAC clone RP11-327C24 from UL, complete sequence	0.844594595
SdnRY1_13049	1	1	3	18	uv|M16217.1:3121-3879-49	459	444	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586406 (LOC102586406), transcript variant X1, mRNA	0.845070423
CLCdnRY2_8079	1	1	1751	1766	uv|GU593054.1:1-1305	1155	1140	Weak	Weak	Suspect[1767,1771];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum digalactosyldiacylglycerol synthase 2, chloroplastic-like (LOC102578378), mRNA	0.846979108
CLCdnRY10_32984	1	1	10	28	uv|AY753578.1:1-838	612	594	Moderate	Moderate	Suspect[1,9];	TRUE_BIOLOGICAL	6181	1	PREDICTED: Solanum tuberosum cytochrome P450 94A2-like (LOC102587068), mRNA	1.018675722
SdnRY1_13215	1	1	9	25	uv|L08935.1:7553-7651	19	3	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum serine carboxypeptidase-like 17 (LOC107062459), mRNA	0.906515581
SdnRY1_13258	1	1	16	32	uv|J02400.1:1-5243-49	2905	2921	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum protein FIZZY-RELATED 2-like (LOC102598464), mRNA	0.908059024
CLCdnRY11_13669	1	1	1732	1747	uv|M77169.1:820-5161	3184	3169	Weak	Weak	Suspect[1748,1762];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum histone deacetylase 14 (LOC102589749), transcript variant X1, mRNA	0.851305335
CLCdnRY11_17162	1	1	1722	1738	uv|L05669.1:6110-6207	79	63	Weak	Weak	Suspect[1739,1761];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein DETOXIFICATION 40-like (LOC102599668), mRNA	0.908574673
SdnRY1_13307	1	1	21	37	uv|M77169.1:820-5161	2040	2024	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum pennellii uncharacterized LOC107008286 (LOC107008286), transcript variant X1, mRNA	0.910125142
CLCdnRY10_35367	1	1	1739	1754	uv|DQ391279.1:1-10285	5072	5057	Weak	Weak	Suspect[1755,1757];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable flavin-containing monooxygenase 1 (LOC102605841), mRNA	0.853727945
CLCdnRY12_10499	1	1	15	31	uv|KC702210.1:1-1022	59	43	Weak	Weak	Suspect[1,14];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum probable galactinol--sucrose galactosyltransferase 2 (LOC102596906), mRNA	0.91272105
PBdnRY1_7910	1	1	1721	1737	uv|J02459.1:1-48502-49	47561	47545	Weak	Weak	Suspect[1738,1748];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum lysM domain receptor-like kinase 3 (LOC102580283), mRNA	0.915331808
CLCdnRY10_29328	1	1	1716	1731	uv|JX560397.1:83-5970	4652	4637	Weak	Weak	Suspect[1732,1748];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602559 (LOC102602559), mRNA	0.85812357
SdnRY1_13510	1	1	1722	1737	uv|EF456740.1:6568-6770-29	127	112	Weak	Weak	Suspect[1738,1747];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum mannan endo-1,4-beta-mannosidase 7-like (LOC102588957), mRNA	0.858614768
CLCdnRY11_60791	1	1	1707	1722	uv|JF909482.1:3850-8059	3123	3138	Weak	Weak	Suspect[1723,1743];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593065 (LOC102593065), mRNA	0.860585198
CLCdnRY10_5086	1	1	10	25	uv|AF327718.1:673-1273	69	54	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587465 (LOC102587465), transcript variant X1, mRNA	0.862068966
CLCdnRY2_12243	1	1	1716	1732	uv|U89961.1:1-4240	1947	1931	Weak	Weak	Suspect[1733,1737];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probable polyamine oxidase 5 (LOC102597076), mRNA	0.921128382
CLCdnRY2_5624	1	1	1	16	uv|KM407511.1:1093-1625	204	189	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum ent-kaurene oxidase, chloroplastic-like (LOC102589573), transcript variant X2, mRNA	0.864553314
PBdnRY1_11698	1	1	17	32	uv|FJ750577.1:368-2560	414	399	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	4447	1	PREDICTED: Solanum tuberosum probable nucleolar protein 5-2 (LOC102585448), mRNA	0.865051903
SdnRY1_13718	1	1	1719	1734	uv|U09128.1:3334-10218	830	815	Weak	Weak	None	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum lycopersicum cytochrome P450 CYP72A219-like (LOC101263726), mRNA	0.865051903
SdnRY1_13765	1	1	10	25	uv|X13003.1:2753-4028	771	756	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	561	1	PREDICTED: Solanum tuberosum probable ADP-ribosylation factor GTPase-activating protein AGD5 (LOC102579832), transcript variant X4, mRNA	0.866551127
CLCdnRY10_28622	1	1	1711	1728	uv|M34298.1:3143-4604	476	459	Weak	Weak	None	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 86A1-like (LOC102578982), mRNA	0.983796296
SdnRY1_13855	1	1	1701	1716	uv|AF379854.1:4263-5841	584	599	Weak	Weak	Suspect[1717,1727];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum probable pectate lyase 5 (LOC102602135), mRNA	0.868558193
CLCdnRY10_27385	1	1	13	28	uv|AF379854.1:4263-5841	208	193	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum cinnamate beta-D-glucosyltransferase-like (LOC102593207), mRNA	0.871080139
CLCdnRY10_27385	1	1	19	34	uv|AY962893.1:2004-2563	408	393	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum tuberosum cinnamate beta-D-glucosyltransferase-like (LOC102593207), mRNA	0.871080139
CLCdnRY5_41761	1	1	1700	1715	uv|M35007.1:1-864	225	210	Weak	Weak	Suspect[1716,1722];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor RAP2-7 (LOC102579807), transcript variant X1, mRNA	0.871080139
SdnRY1_14000	1	1	24	39	uv|AF327712.1:1582-7289	1548	1533	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum lycopersicum silicon efflux transporter LSI2-like (LOC101259123), transcript variant X2, mRNA	0.873108265
SdnRY1_14034	1	1	1688	1703	uv|AF025844.2:1-1301	1202	1187	Weak	Weak	Suspect[1704,1716];	TRUE_BIOLOGICAL	6134	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 90A1-like (LOC102584658), mRNA	0.874125874
SdnRY1_14037	1	1	1688	1703	uv|AF025844.2:1-1301	1202	1187	Weak	Weak	Suspect[1704,1716];	TRUE_BIOLOGICAL	6134	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 90A1-like (LOC102584658), mRNA	0.874125874
CLCdnRY6_17163	1	1	15	31	uv|X65316.2:695-984	251	267	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	7049	1	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 12 (LOC102602627), mRNA	0.934033859
PBdnRY1_10663	1	1	1679	1694	uv|AF379854.1:3-2710	1694	1679	Weak	Weak	Suspect[1695,1713];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum putative dual specificity protein phosphatase DSP8 (LOC102603222), mRNA	0.875656743
CLCdnRY10_931	1	1	23	38	uv|M16217.1:1-2529	1288	1273	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum UDP-galactose transporter 2 (LOC102600643), mRNA	0.879249707
SdnRY1_14227	1	1	16	31	uv|M77169.1:820-5161	3169	3184	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum histone deacetylase 14 (LOC102589749), transcript variant X2, mRNA	0.879765396
CLCdnRY10_48436	1	1	3	18	uv|KF718979.1:2206-6730	2561	2576	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum serine carboxypeptidase-like 45 (LOC102591651), mRNA	0.881316099
CLCdnRY10_42699	1	1	1676	1693	uv|AY568055.1:9139-10024	238	221	Weak	Weak	Suspect[1694,1700];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum G2/mitotic-specific cyclin-2-like (LOC101265619), mRNA	1
CLCdnRY10_9630	1	1	3	24	uv|U09128.1:3334-10218	840	861	Weak	Weak	Suspect[1,2];Suspect[1681,1699];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum geraniol 8-hydroxylase-like (LOC102580168), mRNA	1.236021189
CLCdnRY12_55094	1	1	1656	1675	uv|DQ883689.3:1-1994	1369	1388	Moderate	Moderate	Suspect[1676,1699];	NO_DATA	1	1	PREDICTED: Solanum tuberosum WD repeat-containing protein 91 homolog (LOC102590294), transcript variant X2, mRNA	1.118304885
CLCdnRY10_9630	1	1	1665	1680	uv|KF853602.1:1019-2932	262	277	Weak	Weak	Suspect[1,2];Suspect[1681,1699];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum geraniol 8-hydroxylase-like (LOC102580168), mRNA	0.882872278
PBdnRY1_8296	1	1	8	23	uv|AY568055.1:6692-7837	687	672	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein disulfide isomerase-like 5-2 (LOC102593267), mRNA	0.882872278
CLCdnRY7_30319	1	1	7	28	uv|KC702216.1:1-1022	259	238	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum protein IQ-DOMAIN 14-like (LOC102600281), transcript variant X2, mRNA	1.238207547
CLCdnRY5_5349	1	1	24	39	uv|KP126802.1:8623-13621-38	536	521	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum uncharacterized protein At2g24330-like (LOC102584312), mRNA	0.885478158
CLCdnRY8_42122	1	1	1657	1672	uv|JF909482.1:3850-8059	3123	3138	Weak	Weak	Suspect[1673,1693];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593065 (LOC102593065), mRNA	0.886001181
PBdnRY1_143	1	1	6	21	uv|KC614689.1:1-590	88	103	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597217 (LOC102597217), transcript variant X1, mRNA	0.887049083
PBdnRY1_143	1	1	20	35	uv|KC702237.1:1-1024	978	963	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597217 (LOC102597217), transcript variant X1, mRNA	0.887049083
SdnRY1_14576	1	1	11	27	uv|JQ927446.1:4885-6835-49	1836	1820	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum alpha-amylase-like (LOC102598863), mRNA	0.948991696
SdnRY1_14639	1	1	15	31	uv|KC702228.1:1-1023	29	45	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586397 (LOC102586397), mRNA	0.950683304
SdnRY1_14682	1	1	1	18	uv|M34298.1:3143-4604	459	476	Weak	Weak	None	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 86A1-like (LOC102578982), mRNA	1.011302796
CLCdnRY3_28590	1	1	13	29	uv|U89932.1:553-1856	1142	1126	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum myosin heavy chain kinase B-like (LOC102588343), mRNA	0.951814396
SdnRY1_14719	1	1	1658	1675	uv|J02459.1:1-48502-49	24051	24034	Weak	Weak	Suspect[1676,1679];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum zeatin O-glucosyltransferase-like (LOC102587175), mRNA	1.012507445
CLCdnRY11_10629	1	1	21	39	uv|M77169.1:820-5161	1461	1443	Moderate	Moderate	Suspect[1,20];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 10 (LOC102578159), transcript variant X4, mRNA	1.073345259
CLCdnRY10_16703	1	1	1638	1653	uv|J02400.1:1-5243-49	1526	1511	Weak	Weak	Suspect[1654,1677];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum pectin acetylesterase 5-like (LOC102601268), mRNA	0.894454383
PBdnRY1_3351	1	1	1643	1658	uv|J02459.1:1-48502-49	17849	17864	Weak	Weak	Suspect[1659,1674];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604949 (LOC102604949), transcript variant X1, mRNA	0.896057348
SdnRY1_14822	1	1	10	25	uv|L05081.1:2594-3343	610	595	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum histidine decarboxylase-like (LOC102580376), mRNA	0.896057348
CLCdnRY8_1746	1	1	1654	1669	uv|M16217.1:1-2529	555	540	Weak	Weak	Suspect[1670,1673];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum chaperonin-60 beta subunit (LOC102577525), mRNA<>Solanum tuberosum chaperonin-60 beta subunit mRNA, nuclear gene encoding chloroplast protein, complete cds	0.896592947
CLCdnRY1_7150	1	1	1654	1669	uv|KM407512.1:886-4985	2435	2450	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum polyadenylate-binding protein RBP45 (LOC102583610), mRNA	0.898741762
CLCdnRY6_22715	1	1	1628	1645	uv|KF718995.1:2216-3853	131	148	Weak	Weak	Suspect[1646,1667];	NO_DATA	1	1	PREDICTED: Solanum tuberosum DNA-directed RNA polymerase III subunit RPC3 (LOC102597386), mRNA	1.019796041
CLCdnRY10_66714	1	1	1639	1655	uv|JN874481.1:2435-2539	80	64	Weak	Weak	Suspect[1656,1665];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum ras GTPase-activating protein-binding protein 2-like (LOC102583564), transcript variant X1, mRNA	0.960960961
CLCdnRY2_8884	1	1	23	38	uv|X51450.1:2521-3852	348	363	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum magnesium transporter MRS2-4 (LOC102599491), mRNA	0.900900901
CLCdnRY11_22683	1	1	1642	1658	uv|KF853602.1:1019-2932	1675	1691	Weak	Weak	Suspect[1661,1664];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum carnosine N-methyltransferase-like (LOC102600462), mRNA	0.961538462
CLCdnRY11_22683	1	1	1645	1660	uv|U13869.1:2390-2731	125	140	Weak	Weak	Suspect[1661,1664];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum carnosine N-methyltransferase-like (LOC102600462), mRNA	0.901442308
SdnRY1_15019	1	1	1630	1646	uv|KF680544.1:323-942	326	342	Weak	Weak	Suspect[1647,1662];	NO_DATA	1	1	PREDICTED: Solanum tuberosum tRNA (guanine(37)-N1)-methyltransferase 2 (LOC102602194), mRNA	0.962695548
CLCdnRY8_379	1	1	1633	1648	uv|KF853601.1:1021-3588	1976	1961	Weak	Weak	Suspect[1649,1662];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum acetolactate synthase 2, chloroplastic-like (LOC102595762), mRNA	0.902527076
CLCdnRY3_27320	1	1	1620	1635	uv|EU186086.1:9349-10480-30	152	167	Weak	Weak	Suspect[1636,1656];	NO_DATA	1	1	Solanum tuberosum chromosome 3 mitochondrion, complete sequence	0.905797101
CLCdnRY11_29874	1	1	1636	1651	uv|HM162846.2:614-1656	66	81	Weak	Weak	Suspect[1652,1652];	TRUE_BIOLOGICAL	5690	1	PREDICTED: Solanum tuberosum dnaJ protein P58IPK homolog (LOC102592524), mRNA	0.907990315
CLCdnRY9_2368	1	1	1619	1635	uv|KY031726.1:1-7905	5107	5091	Weak	Weak	Suspect[1636,1651];	TRUE_BIOLOGICAL	82115	1	Solanum tuberosum Hsp90-2-like (LOC102577431), mRNA<>Solanum tuberosum clone 054G03 Hsp90-2-like mRNA, complete cds	0.969109631
CLCdnRY3_2117	1	1	1619	1635	uv|KY031726.1:1-7905	5107	5091	Weak	Weak	Suspect[1636,1650];	TRUE_BIOLOGICAL	82115	1	Solanum tuberosum Hsp90-2-like (LOC102577431), mRNA<>Solanum tuberosum clone 054G03 Hsp90-2-like mRNA, complete cds	0.96969697
SdnRY1_15250	1	1	8	24	uv|U02436.1:1330-2607	963	979	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum pennellii uncharacterized LOC107012169 (LOC107012169), mRNA	0.970873786
CLCdnRY5_16536	1	1	1605	1621	uv|L05669.1:6110-6207	79	63	Weak	Weak	Suspect[1622,1644];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein DETOXIFICATION 40-like (LOC102599668), mRNA	0.97323601
CLCdnRY10_14153	1	1	1607	1622	uv|L08862.1:2848-3728-49	362	377	Weak	Weak	Suspect[1623,1643];	NO_DATA	1	1	PREDICTED: Solanum tuberosum UPF0496 protein 1-like (LOC102588099), mRNA	0.91296409
CLCdnRY7_32645	1	1	1623	1640	uv|NGB00135.2:2133-2279	57	40	Weak	Weak	Suspect[1641,1641];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum DNA-directed RNA polymerase V subunit 1 (LOC778258), transcript variant X2, mRNA	1.035953687
SdnRY1_15366	1	1	1617	1633	uv|KF719004.1:2204-2946	637	653	Weak	Weak	Suspect[1634,1641];	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum pennellii deoxyhypusine synthase (LOC107008871), mRNA	0.975015235
CLCdnRY8_18375	1	1	1610	1626	uv|U09476.1:1-864	616	600	Weak	Weak	Suspect[1627,1641];	TRUE_BIOLOGICAL	581	1	PREDICTED: Solanum tuberosum putative disease resistance protein RGA3 (LOC102599401), transcript variant X3, mRNA	0.975015235
CLCdnRY12_35990	1	1	1622	1638	uv|FJ931533.1:7978-12753-49	2506	2490	Weak	Weak	Suspect[1639,1640];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum lysosomal Pro-X carboxypeptidase-like (LOC102586762), mRNA	0.975609756
CLCdnRY10_780	1	1	19	35	uv|DQ391279.1:1-10285	23	7	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum cytochrome P450 71A1-like (LOC102597031), mRNA	0.976800977
SdnRY1_15438	1	1	9	24	uv|DQ391279.1:1-10285	7210	7195	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	0.916310324
CLCdnRY1_17076	1	1	1610	1626	uv|U09476.1:1-864	616	600	Weak	Weak	Suspect[1627,1635];	TRUE_BIOLOGICAL	581	1	PREDICTED: Solanum tuberosum putative disease resistance protein RGA3 (LOC102599401), transcript variant X3, mRNA	0.978593272
CLCdnRY9_23319	1	1	1611	1626	uv|U02452.1:4310-5466	1049	1064	Weak	Weak	Suspect[1627,1635];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum equilibrative nucleotide transporter 3-like (LOC102601592), transcript variant X1, mRNA	0.917431193
CLCdnRY9_4055	1	1	1601	1616	uv|U55760.1:1-2749	2473	2458	Weak	Weak	Suspect[1617,1635];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum cyclic nucleotide-gated ion channel 4-like (LOC102593350), mRNA	0.917431193
CLCdnRY8_29002	1	1	1587	1603	uv|U09128.1:3334-10218	2202	2218	Weak	Weak	Suspect[1604,1627];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum probable ADP-ribosylation factor GTPase-activating protein AGD5 (LOC102579832), transcript variant X5, mRNA	0.98340504
CLCdnRY1_754	1	1	22	43	uv|JX069762.1:9774-9902-49	48	69	Moderate	Moderate	Suspect[1,21];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum eukaryotic translation initiation factor 3 subunit C-like (LOC102595694), mRNA	1.292307692
CLCdnRY1_754	1	1	24	45	uv|NGB00844.1:1-48	1	22	Moderate	Moderate	Suspect[1,21];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum eukaryotic translation initiation factor 3 subunit C-like (LOC102595694), mRNA	1.292307692
CLCdnRY3_5545	1	1	25	42	uv|KC702169.1:1-808	114	131	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586098 (LOC102586098), mRNA	1.04679803
CLCdnRY4_7918	1	1	1607	1623	uv|U30497.1:3230-4814	402	418	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum heterogeneous nuclear ribonucleoprotein R (LOC102601207), transcript variant X2, mRNA	0.985828712
PBdnRY1_6317	1	1	1585	1600	uv|AY568055.1:9139-10024	241	226	Weak	Weak	Suspect[1601,1623];	NO_DATA	1	1	PREDICTED: Solanum tuberosum isoflavone 2'-hydroxylase-like (LOC102579822), mRNA	0.924214418
SdnRY1_15798	1	1	9	25	uv|L08935.1:7553-7651	19	3	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum serine carboxypeptidase-like 17 (LOC107062459), mRNA	0.988875155
CLCdnRY10_18189	1	1	4	20	uv|DQ391279.1:1-10285	23	7	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum cytochrome P450 71A1-like (LOC102605423), mRNA	0.989486704
CLCdnRY10_35355	1	1	21	36	uv|U29899.1:4697-5948	455	440	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum sodium/hydrogen exchanger 2-like (LOC102578176), transcript variant X2, mRNA	0.927643785
CLCdnRY9_29760	1	1	1597	1612	uv|KC503966.1:1435-1589	141	126	Weak	Weak	Suspect[1613,1615];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum pennellii uncharacterized LOC107028866 (LOC107028866), mRNA	0.92879257
CLCdnRY4_28397	1	1	1576	1591	uv|AF223639.1:108-415	176	191	Weak	Weak	Suspect[1592,1614];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 3.1-like (LOC102602682), mRNA	0.92936803
PBdnRY1_3913	1	1	1580	1595	uv|KC702234.1:1-1022	313	298	Weak	Weak	Suspect[1596,1614];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii DNA polymerase delta small subunit (LOC107015118), mRNA	0.92936803
CLCdnRY2_3399	1	1	10	26	uv|X70481.1:3564-4492	611	595	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum F-box protein At2g32560-like (LOC102587314), mRNA	0.991940484
CLCdnRY2_3399	1	1	7	22	uv|KF718979.1:2206-6730	540	555	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum F-box protein At2g32560-like (LOC102587314), mRNA	0.929944203
SdnRY1_15975	1	1	22	37	uv|AF379854.1:3-2710	1161	1176	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum auxin response factor 8-like (LOC102597643), misc_RNA	0.93225606
SdnRY1_15982	1	1	1	16	uv|JN874480.1:1050-2714	499	514	Weak	Weak	None	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum glycerol kinase (LOC102583803), mRNA	0.932835821
SdnRY1_16014	1	1	24	39	uv|L08860.1:1858-2910-49	360	375	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch02, complete genome	0.933997509
SdnRY1_16014	1	1	26	41	uv|JN874480.1:6795-9434	220	235	None	Weak	Suspect[1,23];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	0.933997509
CLCdnRY10_9922	1	1	1571	1587	uv|AF379854.1:4263-5841	385	369	Weak	Weak	Suspect[1593,1603];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum heptahelical transmembrane protein 4-like (LOC102598956), mRNA	0.998128509
CLCdnRY3_10517	1	1	1588	1603	uv|KC702170.1:1-1957	1528	1513	Weak	Weak	None	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum pennellii serine-threonine kinase receptor-associated protein-like (LOC107014720), mRNA	0.935745477
CLCdnRY10_9922	1	1	1577	1592	uv|GU339046.1:5854-6432-49	494	509	Weak	Weak	Suspect[1593,1603];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum heptahelical transmembrane protein 4-like (LOC102598956), mRNA	0.935745477
CLCdnRY10_41829	1	1	23	38	uv|KM407512.1:886-4985	2668	2683	Weak	Weak	Suspect[1,22];Suspect[1579,1601];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592948 (LOC102592948), mRNA	0.936914428
CLCdnRY10_41829	1	1	1563	1578	uv|JN874480.1:1050-2714	744	729	Weak	Weak	Suspect[1,22];Suspect[1579,1601];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592948 (LOC102592948), mRNA	0.936914428
SdnRY1_16125	1	1	1561	1576	uv|FJ931533.1:7978-12753-49	984	999	Weak	Weak	Suspect[1577,1598];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum phospholipase A1-II 1-like (LOC102600993), mRNA	0.938673342
CLCdnRY5_22558	1	1	1573	1589	uv|KF853602.1:1019-2932	1675	1691	Weak	Weak	Suspect[1592,1595];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum carnosine N-methyltransferase-like (LOC102600462), mRNA	1.003134796
CLCdnRY5_22558	1	1	1576	1591	uv|U13869.1:2390-2731	125	140	Weak	Weak	Suspect[1592,1595];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum carnosine N-methyltransferase-like (LOC102600462), mRNA	0.940438871
CLCdnRY11_64637	1	1	1580	1595	uv|DQ883658.3:1-743	66	51	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable receptor-like protein kinase At1g67000 (LOC102582318), mRNA	0.940438871
CLCdnRY12_34146	1	1	1564	1579	uv|M16217.1:1-2529	1963	1978	Weak	Weak	Suspect[1580,1595];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum lanC-like protein GCL2 (LOC102584073), mRNA	0.940438871
CLCdnRY2_20156	1	1	25	42	uv|AJ310442.1:3933-4082	39	22	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	1.067839196
PBdnRY1_2098	1	1	1553	1568	uv|AY785149.1:8490-8652-41	146	131	Weak	Weak	Suspect[1569,1592];	NO_DATA	1	1	PREDICTED: Solanum tuberosum scopoletin glucosyltransferase (LOC102583517), mRNA	0.942211055
CLCdnRY10_25191	1	1	1566	1582	uv|Z50121.2:19-1510	938	954	Weak	Weak	Suspect[1583,1591];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum tRNA threonylcarbamoyladenosine dehydratase (LOC102595601), transcript variant X3, mRNA	1.00565682
PBdnRY1_5116	1	1	1567	1582	uv|M28247.1:2745-2969	222	207	Weak	Weak	Suspect[1583,1590];	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum premnaspirodiene oxygenase-like (LOC102595946), mRNA	0.943396226
CLCdnRY10_29615	1	1	1549	1564	uv|KC702228.1:1-1023	29	14	Weak	Weak	Suspect[1565,1586];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum serine carboxypeptidase 1-like (LOC102594869), mRNA	0.945775536
SdnRY1_16343	1	1	1563	1578	uv|KY031734.1:1-4625	621	636	Weak	Weak	Suspect[1579,1586];	TRUE_BIOLOGICAL	82115	1	Solanum tuberosum tubulin alpha chain (LOC102604019), mRNA<>Solanum tuberosum clone 106F01 unknown mRNA	0.945775536
CLCdnRY7_243	1	1	25	43	uv|M98046.1:2386-3803	654	636	Moderate	Moderate	Suspect[1,24];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum fructose 1,6-bisphosphate aldolase 1 (SlFBA1), mRNA	1.137081491
CLCdnRY12_48532	1	1	20	36	uv|J02400.1:1-5243-49	4292	4276	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum probable receptor-like protein kinase At5g47070 (LOC102602988), transcript variant X5, mRNA	1.010739103
SdnRY1_16422	1	1	1548	1563	uv|KF718979.1:2206-6730	2125	2110	Weak	Weak	Suspect[1564,1582];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum KH domain-containing protein At5g56140 (LOC102596196), transcript variant X1, mRNA	0.948166877
CLCdnRY2_24104	1	1	1551	1566	uv|L08862.1:2848-3728-49	396	411	Weak	Weak	Suspect[1567,1581];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062181 (LOC107062181), ncRNA	0.948766603
CLCdnRY12_17118	1	1	1555	1570	uv|AY390769.1:1-1000	906	891	Weak	Weak	Suspect[1571,1577];	NO_DATA	1	1	Solanum tuberosum polypyrimidine tract-binding protein homolog 3-like (PTB1), mRNA<>Solanum tuberosum polypyrimidine tract-binding protein 1 (PTB1) mRNA, complete cds	0.951173114
CLCdnRY6_35325	1	1	1558	1573	uv|EU186086.1:9349-10480-30	334	319	Weak	Weak	Suspect[1574,1577];	NO_DATA	1	1	PREDICTED: Solanum tuberosum inactive beta-amylase 9 (LOC102590483), mRNA	0.951173114
SdnRY1_16584	1	1	25	45	uv|U89960.1:4738-7717	1341	1321	Moderate	Moderate	Suspect[1,2];Suspect[19,24];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum WAT1-related protein At1g09380-like (LOC102582367), mRNA	1.26984127
CLCdnRY12_66346	1	1	7	23	uv|LC121520.1:2705-3093	336	320	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum putative F-box protein At1g49610 (LOC102603985), transcript variant X9, mRNA	1.015873016
SdnRY1_16584	1	1	3	18	uv|X70481.1:3564-4492	748	733	Weak	Moderate	Suspect[1,2];Suspect[19,24];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum WAT1-related protein At1g09380-like (LOC102582367), mRNA	0.952380952
CLCdnRY10_12568	1	1	18	33	uv|AF379854.1:4263-5841	217	202	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase 16-like (LOC102604374), mRNA	0.952380952
CLCdnRY8_153	1	1	6	21	uv|JN874480.1:1050-2714	942	927	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (LOC102606161), mRNA	0.952380952
CLCdnRY8_11702	1	1	1558	1573	uv|KY031724.1:1-5301	1184	1199	Weak	Weak	Suspect[1574,1575];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like (LOC102593256), transcript variant X2, mRNA	0.952380952
CLCdnRY12_58546	1	1	1542	1558	uv|AY568055.1:6692-7837	888	904	Weak	Weak	Suspect[1559,1570];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cytochrome P450 CYP749A22-like (LOC102584622), mRNA	1.01910828
PBdnRY1_13140	1	1	1546	1561	uv|KC702231.1:1-1021	541	556	Weak	Weak	Suspect[1562,1568];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii zeatin O-glucosyltransferase-like (LOC107004845), mRNA	0.956632653
PBdnRY1_9263	1	1	22	37	uv|HQ418395.1:7430-7530	56	71	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Capsicum annuum metal tolerance protein 1-like (LOC107854807), transcript variant X1, mRNA	0.957854406
SdnRY1_16774	1	1	5	22	uv|GU827641.1:1944-2103	67	50	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein TRANSPORT INHIBITOR RESPONSE 1 (LOC102578999), mRNA	1.086261981
CLCdnRY1_11201	1	1	1	30	uv|NGB01084.1:1-70	33	4	Strong	Strong	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum beta-amyrin 28-oxidase-like (LOC102594160), mRNA	1.854219949
CLCdnRY10_11944	1	1	1540	1556	uv|M34305.1:3197-4538	701	717	Weak	Weak	Suspect[1557,1563];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum cytochrome c-type biogenesis ccda-like chloroplastic protein (LOC102585427), transcript variant X1, mRNA	1.023672425
CLCdnRY10_9878	1	1	1540	1555	uv|NGB00620.1:1102-1287	101	86	Weak	Weak	Suspect[1556,1563];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum homogentisate 1,2-dioxygenase (LOC102579798), mRNA	0.959692898
SdnRY1_16830	1	1	7	23	uv|M64753.1:1943-3400	1276	1292	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	590	1	Solanum demissum isolate 380L15 disease resistance protein R3a-like protein pseudogene, complete sequence	1.024327785
PBdnRY1_832	1	1	17	32	uv|GU593054.1:6136-8806	1839	1854	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	PREDICTED: Solanum tuberosum NAD-dependent epimerase/dehydratase family protein-like protein (LOC102577923), transcript variant X1, mRNA	0.960307298
CLCdnRY7_26349	1	1	13	29	uv|U89932.1:553-1856	1142	1126	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum myosin heavy chain kinase B-like (LOC102588343), mRNA	1.025641026
CLCdnRY9_25316	1	1	1536	1552	uv|JF909481.1:3855-5640	1102	1086	Weak	Weak	Suspect[1553,1560];	NO_DATA	1	1	PREDICTED: Solanum pennellii uncharacterized LOC107015882 (LOC107015882), mRNA	1.025641026
PBdnRY1_8326	1	1	1537	1552	uv|JX025642.1:7290-7461	105	90	Weak	Weak	Suspect[1553,1560];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 5'-nucleotidase SurE-like (LOC102588933), mRNA	0.961538462
PBdnRY1_4205	1	1	9	24	uv|J02400.1:1-5243-49	4161	4146	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum cytochrome P450 71A4-like (LOC102583405), mRNA	0.961538462
CLCdnRY11_51636	1	1	15	32	uv|AF379854.1:4263-5841	189	172	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum tRNA pseudouridine(38/39) synthase (LOC102588947), mRNA	1.090442591
CLCdnRY11_51636	1	1	22	37	uv|M16217.1:1-2529	938	953	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum tRNA pseudouridine(38/39) synthase (LOC102588947), mRNA	0.962155228
CLCdnRY2_33385	1	1	7	23	uv|HM640258.1:3527-5744	872	888	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum tuberosum 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase-like (LOC102593705), transcript variant X1, mRNA	1.028277635
SdnRY1_16999	1	1	1530	1546	uv|J02482.1:1-5386-49	336	320	Weak	Weak	Suspect[1547,1553];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum probable pectate lyase 5 (LOC102598232), mRNA	1.030264005
SdnRY1_17011	1	1	1533	1548	uv|M16217.1:1-2529	1834	1819	Weak	Weak	Suspect[1549,1553];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized GPI-anchored protein At4g28100 (LOC102586269), mRNA	0.965872505
SdnRY1_17020	1	1	1535	1550	uv|U29899.1:4697-5948	1040	1055	Weak	Weak	Suspect[1551,1553];	NO_DATA	1	1	PREDICTED: Solanum tuberosum scopoletin glucosyltransferase-like (LOC102584161), mRNA	0.965872505
PBdnRY1_3434	1	1	1516	1531	uv|KC702205.1:1-1107	57	42	Weak	Weak	Suspect[1532,1552];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum serine acetyltransferase 2-like (LOC102590258), transcript variant X1, mRNA	0.966494845
CLCdnRY6_24774	1	1	2	17	uv|AF379854.1:3-2710	1223	1238	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum putative UPF0481 protein At3g02645 (LOC102595944), transcript variant X1, mRNA	0.967117988
SdnRY1_17150	1	1	1515	1530	uv|DQ851853.1:424-491	34	19	Weak	Weak	Suspect[1531,1544];	NO_DATA	1	1	Solanum lycopersicum cDNA, clone: LEFL2030I21, HTC in fruit	0.971502591
SdnRY1_17156	1	1	7	22	uv|KC702223.1:1-537	203	218	Weak	Weak	Suspect[1,6];Suspect[1541,1544];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum glutamate dehydrogenase A (LOC102599312), mRNA	0.971502591
SdnRY1_17156	1	1	1525	1540	uv|U09128.1:3334-10218	5028	5043	Weak	Weak	Suspect[1,6];Suspect[1541,1544];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum glutamate dehydrogenase A (LOC102599312), mRNA	0.971502591
PBdnRY1_3940	1	1	6	21	uv|FJ750577.1:368-2560	2048	2063	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum 7-deoxyloganetic acid glucosyltransferase (LOC101259920), mRNA	0.97213221
PBdnRY1_14246	1	1	13	28	uv|KC702194.1:1-1023	481	466	Weak	Weak	Suspect[1,12];Suspect[1525,1543];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum protein arginine N-methyltransferase 1.1-like (LOC102585842), mRNA	0.97213221
PBdnRY1_14246	1	1	1509	1524	uv|AF379854.1:4263-5841	446	431	Weak	Weak	Suspect[1,12];Suspect[1525,1543];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum protein arginine N-methyltransferase 1.1-like (LOC102585842), mRNA	0.97213221
CLCdnRY11_89768	1	1	25	40	uv|KF718995.1:2216-3853	849	834	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum laccase-12-like (LOC102605547), mRNA	0.97213221
CLCdnRY10_27878	1	1	15	30	uv|AF379854.1:3-2710	1890	1905	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum sodium-coupled neutral amino acid transporter 2 (LOC102581955), mRNA	0.975292588
PBdnRY1_1457	1	1	1498	1513	uv|KF718979.1:2206-6730	558	543	Weak	Weak	Suspect[1514,1537];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum serine/threonine-protein phosphatase PP2A-2 catalytic subunit (LOC102586030), mRNA	0.975927131
SdnRY1_17554	1	1	1491	1507	uv|KF718978.1:2204-3575	574	590	Weak	Weak	Suspect[1508,1524];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g47360 (LOC102603561), transcript variant X1, mRNA	1.049868766
CLCdnRY9_16933	1	1	3	18	uv|KU936036.1:2396-3564	267	282	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	Solanum pennellii chromosome ch09, complete genome	0.984251969
CLCdnRY10_183	1	1	7	22	uv|JN874480.1:1050-2714	942	927	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (LOC102606161), mRNA	0.984251969
CLCdnRY11_21535	1	1	1493	1511	uv|U30497.1:3230-4814	1532	1550	Moderate	Moderate	Suspect[1512,1523];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585795 (LOC102585795), transcript variant X2, mRNA	1.181877873
CLCdnRY1_17167	1	1	1505	1520	uv|X70481.1:3564-4492	538	523	Weak	Weak	Suspect[1521,1523];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588626 (LOC102588626), transcript variant X1, mRNA	0.984898227
CLCdnRY5_21494	1	1	1492	1510	uv|U30497.1:3230-4814	1532	1550	Moderate	Moderate	Suspect[1511,1522];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585795 (LOC102585795), transcript variant X2, mRNA	1.182654402
CLCdnRY1_146	1	1	6	21	uv|JN874480.1:1050-2714	942	927	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (LOC102606161), mRNA	0.985545335
CLCdnRY3_12944	1	1	1491	1508	uv|KF853602.1:1019-2932	184	201	Weak	Weak	Suspect[1509,1520];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum flavin-containing monooxygenase FMO GS-OX-like 2 (LOC102590178), transcript variant X1, mRNA	1.118421053
PBdnRY1_10542	1	1	1	16	uv|U02436.1:6848-7226	239	254	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum putative hydrolase YtaP (LOC102586798), transcript variant X1, mRNA	0.987491771
CLCdnRY8_40562	1	1	1503	1518	uv|KC702192.1:1-523	266	281	Weak	Weak	Suspect[1519,1519];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum multiple inositol polyphosphate phosphatase 1-like (LOC102580208), mRNA	0.987491771
SdnRY1_17659	1	1	1483	1498	uv|KC702222.1:1-1033	254	269	Weak	Weak	Suspect[1499,1518];	TRUE_BIOLOGICAL	33958	1	PREDICTED: Solanum tuberosum thylakoid membrane protein TERC, chloroplastic (LOC102591196), transcript variant X1, mRNA	0.988142292
CLCdnRY9_58558	1	1	1489	1504	uv|FJ931533.1:7978-12753-49	2029	2014	Weak	Weak	Suspect[1505,1515];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum kinesin-4-like (LOC102597887), mRNA	0.99009901
CLCdnRY10_42640	1	1	17	32	uv|AF061923.1:29-1852	1318	1333	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum TMV resistance protein N-like (LOC107058378), mRNA	0.991407799
PBdnRY1_3607	1	1	16	31	uv|Z22671.1:1221-1388	57	72	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein trichome birefringence-like 19 (LOC102586744), mRNA	0.992720053
SdnRY1_17841	1	1	1486	1502	uv|J02482.1:1-5386-49	336	320	Weak	Weak	Suspect[1503,1509];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum probable pectate lyase 5 (LOC102598232), mRNA	1.060304838
SdnRY1_17878	1	1	1467	1484	uv|NGB00402.1:2108-3532	1299	1316	Weak	Weak	Suspect[1485,1508];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1B-23 (LOC102598942), mRNA	1.127320955
CLCdnRY2_1100	1	1	856	878	uv|Z46234.1:664-3443	703	681	Weak	Weak	None	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum histidinol dehydrogenase, chloroplastic (LOC102590460), transcript variant X1, mRNA	1.463739188
CLCdnRY12_41840	1	1	1477	1492	uv|JF909482.1:3850-8059	1956	1971	Weak	Weak	Suspect[1493,1502];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Nicotiana attenuata DNA-(apurinic or apyrimidinic site) lyase 2 (LOC109231976), transcript variant X3, mRNA	0.998668442
CLCdnRY10_5864	1	1	13	28	uv|KC702209.1:1-2022	1345	1330	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	196118	1	Solanum tuberosum uncharacterized LOC102577677 (LOC102577677), mRNA<>Solanum tuberosum clone 115H04 unknown mRNA	1
CLCdnRY9_14852	1	1	25	40	uv|U02447.1:1-1009	663	678	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	186765	1	PREDICTED: Solanum tuberosum uncharacterized LOC102601384 (LOC102601384), transcript variant X4, mRNA	1
SdnRY1_18072	1	1	1479	1494	uv|KC702187.1:1-1023	671	686	Weak	Weak	Suspect[1495,1499];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g20540-like (LOC102587564), mRNA	1.000667111
VdnRY6_17628	1	1	1474	1489	uv|HM640258.1:317-2913	1635	1650	Weak	Weak	Suspect[1490,1499];	TRUE_BIOLOGICAL	5073	1	PREDICTED: Solanum tuberosum casein kinase II subunit alpha-2-like (LOC102586679), mRNA	1.000667111
SdnRY1_18103	1	1	1476	1492	uv|M35007.1:1327-1473	129	113	Weak	Weak	Suspect[1493,1497];	NO_DATA	1	1	PREDICTED: Solanum tuberosum subtilisin-like protease SBT1.7 (LOC102601698), mRNA	1.068804275
CLCdnRY10_33987	1	1	1465	1480	uv|JF909467.1:4676-4959	137	122	Weak	Weak	Suspect[1481,1497];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein trichome birefringence-like 36 (LOC102605360), mRNA	1.002004008
CLCdnRY12_3827	1	1	1464	1480	uv|U13843.1:1887-9923	2356	2340	Weak	Weak	Suspect[1481,1496];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum protein GPR107 (LOC102594975), mRNA	1.069518717
CLCdnRY10_24497	1	1	1471	1486	uv|U02452.1:4310-5466	1049	1064	Weak	Weak	Suspect[1487,1495];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum equilibrative nucleotide transporter 3-like (LOC102601592), transcript variant X1, mRNA	1.003344482
CLCdnRY8_30353	1	1	1475	1491	uv|KC702202.1:1-1020	590	606	Weak	Weak	Suspect[1492,1492];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable membrane-associated kinase regulator 1 (LOC102596938), mRNA	1.072386059
CLCdnRY2_4995	1	1	6	22	uv|M77169.1:820-5161	2066	2082	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum serine incorporator 3 (LOC102605446), mRNA	1.073825503
CLCdnRY4_43018	1	1	20	36	uv|J02400.1:1-5243-49	4292	4276	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum probable receptor-like protein kinase At5g47070 (LOC102602988), transcript variant X6, mRNA	1.073825503
CLCdnRY6_9970	1	1	1471	1486	uv|U01668.1:7-1288	841	856	Weak	Weak	Suspect[1487,1488];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable beta-1,3-galactosyltransferase 2 (LOC102586590), transcript variant X1, mRNA	1.008064516
CLCdnRY12_78401	1	1	11	27	uv|JN874481.1:2435-2539	64	80	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum ras GTPase-activating protein-binding protein 2-like (LOC102583564), transcript variant X1, mRNA	1.07599193
CLCdnRY11_42030	1	1	5	20	uv|J02459.1:1-48502-49	22671	22656	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum titin (LOC102603317), transcript variant X14, mRNA	1.009421265
CLCdnRY10_11866	1	1	1	16	uv|NGB00599.1:1-47	32	47	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized membrane protein At1g06890-like (LOC102583389), transcript variant X1, mRNA	1.009421265
SdnRY1_18358	1	1	2	17	uv|U67875.1:18-1316	611	596	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum cell division protein FtsY homolog, chloroplastic (LOC102585654), transcript variant X1, mRNA	1.010781671
CLCdnRY11_28795	1	1	1463	1478	uv|KY031724.1:1-5301	1725	1740	Weak	Weak	Suspect[1479,1482];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600551 (LOC102600551), transcript variant X1, mRNA	1.012145749
VdnRY6_16009	1	1	21	36	uv|KY031724.1:1-5301	1921	1906	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum actin-related protein 6 (LOC102596585), mRNA	1.014198783
CLCdnRY11_11553	1	1	25	40	uv|JN874480.1:1050-2714	1056	1041	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum alpha-taxilin (LOC102580094), transcript variant X1, mRNA	1.014198783
CLCdnRY1_36016	1	1	1458	1473	uv|KF718979.1:2206-6730	807	822	Weak	Weak	Suspect[1474,1478];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102582536 (LOC102582536), transcript variant X1, mRNA	1.01488498
PBdnRY1_1198	1	1	1454	1472	uv|M98046.1:2386-3803	636	654	Moderate	Moderate	Suspect[1473,1475];	TRUE_BIOLOGICAL	4930	1	Solanum tuberosum plastidic aldolase (LOC102577738), mRNA<>Solanum tuberosum cultivar Zhongshu 3 plastidic aldolase mRNA, complete cds	1.220338983
CLCdnRY12_76238	1	1	11	26	uv|KF719005.1:2205-5132	1482	1467	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum glutamate receptor 2.8-like (LOC102579176), transcript variant X2, mRNA	1.017639077
CLCdnRY4_7473	1	1	11	26	uv|NGB01020.1:535-633	22	7	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum nuclear pore complex protein NUP50A (LOC102602342), mRNA	1.021102791
CLCdnRY10_891	1	1	14	29	uv|KC702183.1:1-1023	821	836	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum dnaJ protein homolog (LOC102605732), misc_RNA	1.022494888
SdnRY1_18761	1	1	1437	1452	uv|JX560397.1:83-5970	4243	4258	Weak	Weak	Suspect[1453,1464];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor ERF061 (LOC102590166), mRNA	1.024590164
SdnRY1_18768	1	1	18	33	uv|JF909467.1:4676-4959	122	137	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein trichome birefringence-like 36 (LOC102605360), mRNA	1.024590164
CLCdnRY11_48759	1	1	11	27	uv|U67875.1:18-1316	1025	1041	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum uncharacterized membrane protein At1g06890-like (LOC102603522), mRNA	1.093643199
CLCdnRY1_11820	1	1	21	36	uv|U29899.1:1847-4463	918	933	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized LOC102601024 (LOC102601024), mRNA	1.025991792
VdnRY7_4831	1	1	1439	1454	uv|JN874481.1:57-2095	925	940	Weak	Weak	Suspect[1455,1461];	TRUE_BIOLOGICAL	3705	1	PREDICTED: Solanum tuberosum protein ASPARTIC PROTEASE IN GUARD CELL 2 (LOC102583397), mRNA	1.026694045
SdnRY1_18836	1	1	4	19	uv|J02482.1:1-5386-49	1759	1744	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum phosphomannomutase (LOC102589310), transcript variant X2, mRNA	1.02739726
SdnRY1_18857	1	1	754	785	uv|NGB00751.1:1-70	32	1	Moderate	Moderate	None	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial (LOC102590419), mRNA	2.124742975
CLCdnRY1_25162	1	1	20	35	uv|U13187.1:196-287	80	65	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum U11/U12 small nuclear ribonucleoprotein 65 kDa protein (LOC102602989), transcript variant X3, mRNA	1.028101439
CLCdnRY10_19250	1	1	11	27	uv|J02459.1:1-48502-49	25640	25624	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum probable glycosyltransferase At5g03795 (LOC102597972), transcript variant X1, mRNA	1.098146877
CLCdnRY10_17410	1	1	10	25	uv|V00604.2:1-6407-49	3167	3182	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum pseudouridine kinase (LOC102599035), mRNA	1.029512697
CLCdnRY1_21853	1	1	10	25	uv|M16217.1:1-2529	1060	1045	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum agmatine coumaroyltransferase-2-like (LOC102595755), mRNA	1.029512697
PBdnRY1_11948	1	1	16	31	uv|L05081.1:2594-3343	158	173	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	Solanum lycopersicum strain Heinz 1706 chromosome 10 clone slm-51g19 map 10, complete sequence	1.03021978
PBdnRY1_7063	1	1	1429	1444	uv|X70481.1:3564-4492	550	565	Weak	Weak	Suspect[1445,1455];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583331 (LOC102583331), mRNA	1.030927835
CLCdnRY11_25430	1	1	1432	1447	uv|AF310136.1:497-2034	1250	1235	Weak	Weak	Suspect[1448,1455];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum ribonuclease Z, chloroplastic (LOC102579294), mRNA	1.030927835
PBdnRY1_8772	1	1	11	26	uv|U89960.1:4738-7717	1054	1039	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum protein YIPF6 homolog (LOC102600030), mRNA	1.033769814
CLCdnRY11_18792	1	1	11	26	uv|JF909482.1:3850-8059	1590	1605	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum ribonucleoside-diphosphate reductase small chain A (LOC102601428), mRNA	1.035196687
CLCdnRY10_7989	1	1	1432	1447	uv|LC121524.1:2980-3796	487	472	Weak	Weak	Suspect[1448,1448];	NO_DATA	1	1	PREDICTED: Solanum tuberosum UPF0160 protein-like (LOC102600259), mRNA	1.035911602
CLCdnRY9_52549	1	1	17	32	uv|U59231.1:8434-10310-48	1841	1856	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	5658	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC102587497), mRNA	1.037344398
CLCdnRY8_7143	1	1	1421	1436	uv|KC702219.1:1-1059	522	507	Weak	Weak	Suspect[1437,1445];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum BOI-related E3 ubiquitin-protein ligase 1-like (LOC102602558), mRNA	1.038062284
CLCdnRY10_40697	1	1	7	22	uv|JF909482.1:3850-8059	1300	1315	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum vacuolar cation/proton exchanger 3-like (LOC102589501), transcript variant X6, mRNA	1.038062284
SdnRY1_19229	1	1	14	31	uv|KC702216.1:1-1022	48	65	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum BURP domain-containing protein 5-like (LOC102580967), mRNA	1.178101178
SdnRY1_19235	1	1	1408	1423	uv|KC702222.1:1-1033	254	269	Weak	Weak	Suspect[1424,1443];	TRUE_BIOLOGICAL	33958	1	PREDICTED: Solanum pennellii thylakoid membrane protein TERC, chloroplastic (LOC107002268), transcript variant X1, mRNA	1.03950104
CLCdnRY10_23508	1	1	1407	1422	uv|KC702183.1:1-1023	754	739	Weak	Weak	Suspect[1423,1442];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 homolog (LOC102586949), mRNA	1.040221914
CLCdnRY10_16661	1	1	1247	1275	uv|DQ666273.1:28-245	144	116	Moderate	Moderate	None	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum 1-aminocyclopropane-1-carboxylate oxidase (LOC102596265), mRNA	1.948503827
PBdnRY1_12725	1	1	23	39	uv|JN874480.1:1050-2714	513	497	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum protein STRICTOSIDINE SYNTHASE-LIKE 10 (LOC102600163), mRNA	1.113430759
CLCdnRY10_9297	1	1	17	33	uv|AF379854.1:3-2710	1700	1684	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588896 (LOC102588896), mRNA	1.114982578
CLCdnRY12_17088	1	1	1407	1423	uv|KM407512.1:886-4985	3582	3598	Weak	Weak	Suspect[1424,1435];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum protein PMR5 (LOC102591356), mRNA	1.114982578
CLCdnRY9_30783	1	1	1419	1434	uv|KY031734.1:1-4625	1316	1331	Weak	Weak	Suspect[1435,1435];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum ankyrin repeat-containing protein At5g02620-like (LOC102586167), mRNA	1.045296167
CLCdnRY4_31943	1	1	1418	1433	uv|KY031734.1:1-4625	1316	1331	Weak	Weak	Suspect[1434,1434];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum ankyrin repeat-containing protein At5g02620-like (LOC102586167), mRNA	1.046025105
CLCdnRY7_60356	1	1	1411	1427	uv|U09128.1:1-1663	333	349	Weak	Weak	Suspect[1428,1432];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum 3-ketoacyl-CoA synthase 20-like (LOC107061579), mRNA	1.117318436
CLCdnRY12_944	1	1	23	38	uv|M16217.1:1-2529	1288	1273	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum UDP-galactose transporter 2 (LOC102600643), mRNA	1.050420168
PBdnRY1_11591	1	1	1392	1407	uv|L05081.1:2594-3343	472	487	Weak	Weak	Suspect[1408,1428];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative uridine kinase C227.14 (LOC102579105), transcript variant X1, mRNA	1.050420168
CLCdnRY11_70906	1	1	7	23	uv|LC121520.1:2705-3093	336	320	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum putative F-box protein At1g49610 (LOC102603985), transcript variant X9, mRNA	1.122807018
CLCdnRY10_60112	1	1	24	39	uv|AF379854.1:4263-5841	1409	1394	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum pennellii cytochrome P450 CYP72A219-like (LOC107024463), mRNA	1.052631579
CLCdnRY11_45141	1	1	1410	1425	uv|AF379854.1:3-2710	695	680	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum glutamate dehydrogenase A-like (LOC102586580), mRNA	1.052631579
CLCdnRY11_58558	1	1	1394	1409	uv|KC702224.1:1-1022	218	203	Weak	Weak	Suspect[1410,1425];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596055 (LOC102596055), transcript variant X13, mRNA	1.052631579
CLCdnRY1_11358	1	1	10	25	uv|JN204885.1:1-763	689	674	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pre-mRNA-splicing factor SLU7-like (LOC102599170), mRNA	1.054111033
CLCdnRY10_11349	1	1	11	26	uv|HM640258.1:317-2913	1643	1658	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	5073	1	PREDICTED: Solanum tuberosum putative GATA transcription factor 22 (LOC102587834), mRNA	1.059322034
SdnRY1_19932	1	1	9	25	uv|KC702182.1:1-1023	149	133	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum (3S,6E)-nerolidol synthase 1-like (LOC102592813), mRNA	1.137171286
CLCdnRY9_44507	1	1	10	25	uv|KM407509.1:3217-4703	83	98	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum transcription factor bHLH62-like (LOC102591091), mRNA	1.066098081
CLCdnRY12_73603	1	1	7	22	uv|GQ231553.1:512-1019	252	237	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	1301	1	PREDICTED: Solanum tuberosum lysine histidine transporter-like 6 (LOC102587875), mRNA	1.068376068
CLCdnRY8_6165	1	1	24	39	uv|AF310136.1:497-2034	1091	1076	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum zinc finger protein NUTCRACKER-like (LOC102587191), transcript variant X4, mRNA	1.069900143
SdnRY1_20107	1	1	1368	1383	uv|DQ883653.3:1-644	74	89	Weak	Weak	Suspect[1384,1400];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102594717 (LOC102594717), mRNA	1.071428571
CLCdnRY8_273	1	1	1383	1398	uv|KC702194.1:1-1023	707	692	Weak	Weak	Suspect[1399,1399];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum actin-7-like (LOC102599168), mRNA	1.072194425
SdnRY1_20129	1	1	5	20	uv|AF379854.1:4263-5841	372	357	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum Werner Syndrome-like exonuclease (LOC102602785), transcript variant X1, mRNA	1.072194425
CLCdnRY8_13772	1	1	1358	1373	uv|LC121524.1:7013-8404-8	353	368	Weak	Weak	Suspect[1374,1394];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable DNA-3-methyladenine glycosylase 2 (LOC102594175), transcript variant X1, mRNA	1.076040172
SdnRY1_20301	1	1	1359	1374	uv|DQ883653.3:1-644	74	89	Weak	Weak	Suspect[1375,1391];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102594717 (LOC102594717), mRNA	1.078360891
CLCdnRY3_31042	1	1	1349	1365	uv|JQ895027.1:5358-6879-49	771	787	Weak	Weak	Suspect[1366,1388];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum sodium/calcium exchanger NCL1-like (LOC101251749), mRNA	1.152737752
CLCdnRY7_5278	1	1	1349	1365	uv|JQ895027.1:5358-6879-49	771	787	Weak	Weak	Suspect[1366,1388];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum sodium/calcium exchanger NCL1-like (LOC101251749), mRNA	1.152737752
CLCdnRY8_26924	1	1	1349	1365	uv|JQ895027.1:5358-6879-49	771	787	Weak	Weak	Suspect[1366,1387];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum sodium/calcium exchanger NCL1-like (LOC101251749), mRNA	1.153568854
CLCdnRY11_46529	1	1	6	21	uv|JF909482.1:3850-8059	410	425	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum pennellii uncharacterized LOC107018198 (LOC107018198), mRNA	1.0814708
CLCdnRY10_1466	1	1	22	37	uv|NGB00413.1:9419-9516	69	54	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	620	1	Solanum tuberosum myb family transcription factor APL-like (PPS4), mRNA<>Solanum tuberosum PPS4 mRNA for MYB-CC type transfactor, complete cds	1.082251082
CLCdnRY7_43556	1	1	1360	1375	uv|JN874480.1:11708-20103	6635	6620	Weak	Weak	Suspect[1376,1385];	NO_DATA	1	1	PREDICTED: Solanum tuberosum F-box/FBD/LRR-repeat protein At1g13570-like (LOC102581729), transcript variant X2, mRNA	1.083032491
CLCdnRY11_1532	1	1	22	37	uv|NGB00413.1:9419-9516	69	54	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	620	1	Solanum tuberosum myb family transcription factor APL-like (PPS4), mRNA<>Solanum tuberosum PPS4 mRNA for MYB-CC type transfactor, complete cds	1.083032491
CLCdnRY11_8244	1	1	2	18	uv|X02513.1:851-946	22	38	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum malate dehydrogenase, mitochondrial-like (LOC102606140), transcript variant X1, mRNA	1.156905278
PBdnRY1_3438	1	1	1355	1370	uv|U02450.1:497-595	83	98	Weak	Weak	Suspect[1371,1383];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum protein S-acyltransferase 10 (LOC102583577), transcript variant X1, mRNA	1.084598698
CLCdnRY10_7734	1	1	17	32	uv|DQ391279.1:13402-14600	923	938	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	PREDICTED: Solanum tuberosum RHOMBOID-like protein 12, mitochondrial (LOC102580895), transcript variant X1, mRNA	1.085383502
CLCdnRY12_43058	1	1	1354	1369	uv|KC702186.1:1-274	99	114	Weak	Weak	Suspect[1370,1379];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum feruloyl CoA ortho-hydroxylase 2-like (LOC102590939), mRNA	1.087744743
CLCdnRY12_94784	1	1	1352	1367	uv|AY962893.1:8266-9065	565	550	Weak	Weak	Suspect[1368,1379];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587970 (LOC102587970), transcript variant X5, misc_RNA	1.087744743
SdnRY1_20603	1	1	1356	1371	uv|JF909481.1:3855-5640	1305	1320	Weak	Weak	Suspect[1372,1378];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein ECERIFERUM 1-like (LOC102579333), mRNA	1.088534107
PBdnRY1_839	1	1	1361	1376	uv|J02482.1:1-5386-49	4060	4045	Weak	Weak	Suspect[1377,1377];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum pennellii ER membrane protein complex subunit 2 (LOC107004755), mRNA	1.089324619
CLCdnRY4_13942	1	1	1354	1369	uv|KC702223.1:1-537	218	203	Weak	Weak	Suspect[1370,1375];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum glutamate dehydrogenase A (LOC102599312), mRNA	1.090909091
CLCdnRY11_56996	1	1	2	18	uv|KC702208.1:1-1350	949	965	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	1386	1	Solanum pennellii chromosome ch12, complete genome	1.165331391
SdnRY1_20782	1	1	1339	1355	uv|J02400.1:1-5243-49	3503	3487	Weak	Weak	Suspect[1356,1369];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum uncharacterized LOC102582005 (LOC102582005), transcript variant X1, mRNA	1.168736304
CLCdnRY2_20616	1	1	1342	1357	uv|M77169.1:820-5161	1232	1217	Weak	Weak	Suspect[1358,1368];	TRUE_BIOLOGICAL	1485	1	Solanum pennellii chromosome ch05, complete genome	1.096491228
SdnRY1_20846	1	1	1336	1353	uv|X75460.1:3528-3670	28	11	Weak	Weak	Suspect[1354,1366];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum vetispiradiene synthase 1-like (LOC102580114), mRNA	1.244509517
SdnRY1_20858	1	1	1336	1351	uv|DQ851853.1:424-491	34	19	Weak	Weak	Suspect[1352,1365];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102606000 (LOC102606000), transcript variant X1, mRNA	1.098901099
CLCdnRY10_27478	1	1	1333	1349	uv|NGB00114.1:375-473	76	60	Weak	Weak	Suspect[1350,1363];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein UPSTREAM OF FLC-like (LOC102591113), transcript variant X1, mRNA	1.173881145
SdnRY1_20922	1	1	10	25	uv|KC702206.1:1-523	251	236	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum elicitor-responsive protein 1-like (LOC102595029), mRNA	1.101321586
CLCdnRY10_24259	1	1	1343	1358	uv|FJ160466.1:1899-7260-49	4853	4838	Weak	Weak	None	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At4g21190 (LOC102581648), transcript variant X1, mRNA	1.104565538
CLCdnRY8_5656	1	1	11	26	uv|NGB01020.1:535-633	22	7	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum nuclear pore complex protein NUP50A-like (LOC102580884), transcript variant X1, mRNA	1.105379514
SdnRY1_21051	1	1	9	24	uv|LC121524.1:7013-8404-8	1361	1346	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597991 (LOC102597991), transcript variant X2, mRNA	1.105379514
PBdnRY1_6173	1	1	1326	1341	uv|KC702192.1:1-523	402	417	Weak	Weak	Suspect[1342,1355];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum F-box only protein 8-like (LOC102604769), transcript variant X1, mRNA	1.10701107
CLCdnRY1_33551	1	1	1	16	uv|U09128.1:3334-10218	6129	6144	Weak	Weak	None	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum cleavage stimulation factor subunit 50 (LOC102583224), transcript variant X2, mRNA	1.107828656
CLCdnRY3_12915	1	1	1323	1339	uv|V00604.2:1-6407-49	2610	2594	Weak	Weak	Suspect[1340,1353];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum tubulin-folding cofactor C (LOC102590682), mRNA	1.18255728
SdnRY1_21164	1	1	7	23	uv|V00604.2:1-6407-49	4261	4277	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum pennellii probable membrane-associated kinase regulator 4 (LOC107029827), mRNA	1.183431953
CLCdnRY5_26737	1	1	8	23	uv|KY031724.1:1-5301	1723	1738	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum peptide chain release factor PrfB3, chloroplastic (LOC102604754), mRNA	1.110288675
SdnRY1_21207	1	1	1324	1339	uv|KC702228.1:1-1023	50	35	Weak	Weak	Suspect[1340,1350];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum F-box/kelch-repeat protein At3g23880-like (LOC102605399), mRNA	1.111111111
CLCdnRY2_13168	1	1	896	924	uv|EU360889.1:4417-6776-46	1468	1440	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial (LOC102589264), mRNA	2.077151335
CLCdnRY7_4138	1	1	1293	1347	uv|NGB00752.1:1-70	1	55	Strong	Strong	None	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum ATP sulfurylase 1, chloroplastic-like (LOC102593381), mRNA	4.008908686
CLCdnRY1_3135	1	1	1325	1340	uv|U03498.1:4889-5243	7	22	Weak	Weak	Suspect[1341,1346];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum ubiquitin-conjugating enzyme E2 22 (LOC102580115), transcript variant X1, mRNA	1.114413076
CLCdnRY5_23861	1	1	1317	1332	uv|KC702194.1:1-1023	706	691	Weak	Weak	Suspect[1333,1346];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 78 (LOC102597588), mRNA	1.114413076
CLCdnRY1_596	1	1	1314	1331	uv|KF719007.1:3148-3506	289	306	Weak	Weak	Suspect[1332,1338];	NO_DATA	1	1	PREDICTED: Solanum tuberosum mRNA-decapping enzyme subunit 2 (LOC102585242), mRNA	1.270553064
CLCdnRY10_23787	1	1	1310	1325	uv|U29899.1:4697-5948	1191	1206	Weak	Weak	Suspect[1326,1338];	NO_DATA	1	1	PREDICTED: Solanum tuberosum RNA polymerase II C-terminal domain phosphatase-like 2 (LOC102586478), mRNA	1.121076233
CLCdnRY7_669	1	1	1309	1324	uv|DQ883642.3:1-494	460	475	Weak	Weak	Suspect[1325,1338];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602655 (LOC102602655), transcript variant X1, mRNA	1.121076233
PBdnRY1_10125	1	1	12	27	uv|JN581377.1:1749-2242	243	258	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase (LOC102589144), mRNA	1.122754491
SdnRY1_21556	1	1	7	22	uv|JF909482.1:3850-8059	3582	3567	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum clathrin light chain 1-like (LOC102604022), mRNA	1.12528132
CLCdnRY5_15397	1	1	17	32	uv|KM062046.1:3590-3796	43	58	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable 1-acylglycerol-3-phosphate O-acyltransferase (LOC102600597), mRNA	1.127819549
SdnRY1_21642	1	1	1292	1307	uv|U67875.1:18-1316	111	126	Weak	Weak	Suspect[1308,1330];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum receptor-like protein 12 (LOC102583983), mRNA	1.127819549
CLCdnRY5_24233	1	1	1314	1329	uv|FJ160466.1:1899-7260-49	4853	4838	Weak	Weak	None	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At4g21190 (LOC102581648), transcript variant X1, mRNA	1.128668172
CLCdnRY9_59993	1	1	1305	1321	uv|KF853601.1:1021-3588	2162	2146	Weak	Weak	Suspect[1322,1328];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum CDT1-like protein a, chloroplastic (LOC102583611), mRNA	1.204819277
CLCdnRY12_4758	1	1	13	28	uv|LC121520.1:4008-4664	115	100	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum dnaJ homolog subfamily B member 1-like (LOC102592944), mRNA	1.129518072
SdnRY1_21715	1	1	1288	1303	uv|JQ394799.1:3806-3854-49	22	37	Weak	Weak	Suspect[1304,1327];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative lipase ROG1 (LOC102600845), mRNA	1.130369254
CLCdnRY10_15721	1	1	1302	1317	uv|JN874480.1:1050-2714	1014	999	Weak	Weak	Suspect[1318,1326];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum bifunctional protein FolD 4, chloroplastic (LOC102582792), mRNA	1.131221719
CLCdnRY8_7827	1	1	1303	1321	uv|AF379854.1:3-2710	1681	1663	Moderate	Moderate	Suspect[1322,1324];	NO_DATA	1	1	PREDICTED: Solanum tuberosum HD domain-containing protein 2-like (LOC102591421), mRNA	1.359516616
SdnRY1_21850	1	1	1286	1302	uv|DQ493881.2:2963-3059	35	19	Weak	Weak	Suspect[1303,1321];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum exosome complex exonuclease RRP46 homolog (LOC102597142), mRNA	1.211203634
PBdnRY1_12586	1	1	1303	1319	uv|J02459.1:1-48502-49	36970	36954	Weak	Weak	Suspect[1320,1320];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum flavone 3'-O-methyltransferase 1-like (LOC102602154), mRNA	1.212121212
CLCdnRY12_6197	1	1	8	23	uv|KP126802.1:8623-13621-38	3393	3408	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum binding partner of ACD11 1 (LOC102595744), transcript variant X2, mRNA	1.136363636
CLCdnRY10_40566	1	1	1291	1306	uv|KC702187.1:1-1023	166	151	Weak	Weak	Suspect[1307,1319];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cDNA, clone: LEFL1032AG03, HTC in leaf	1.137225171
SdnRY1_21925	1	1	1287	1302	uv|L08860.1:1858-2910-49	1015	1030	Weak	Weak	Suspect[1303,1317];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum calcium uniporter protein 2, mitochondrial (LOC102601122), mRNA	1.138952164
VdnRY5_9959	1	1	1281	1296	uv|U67875.1:18-1316	1068	1083	Weak	Weak	Suspect[1297,1316];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 (LOC102586297), mRNA	1.139817629
CLCdnRY11_23686	1	1	1277	1292	uv|U02436.1:1330-2607	986	971	Weak	Weak	Suspect[1293,1313];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probable adenylate kinase 6, chloroplastic (LOC102582917), mRNA	1.142421935
CLCdnRY11_19606	1	1	1291	1306	uv|U30497.1:5897-6051	140	155	Weak	Weak	Suspect[1307,1312];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein trichome birefringence-like 41 (LOC102599643), transcript variant X1, mRNA	1.143292683
SdnRY1_22096	1	1	24	39	uv|V00604.2:1-6407-49	1200	1215	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum mitochondrial uncoupling protein 3 (LOC102581449), transcript variant X1, mRNA	1.145038168
SdnRY1_22118	1	1	24	39	uv|V00604.2:1-6407-49	1200	1215	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum mitochondrial uncoupling protein 3 (LOC102581449), transcript variant X1, mRNA	1.145912911
CLCdnRY8_12783	1	1	12	27	uv|U37573.1:955-1950	113	128	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 26S proteasome non-ATPase regulatory subunit 13 homolog B-like (LOC102599949), mRNA	1.148545176
CLCdnRY11_16101	1	1	25	40	uv|M98046.1:2386-3803	771	786	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probable beta-1,3-galactosyltransferase 11 (LOC102600323), transcript variant X1, mRNA	1.153846154
CLCdnRY5_53415	1	1	17	32	uv|AF327712.1:1582-7289	2780	2795	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum uncharacterized protein At1g51745-like (LOC102600914), transcript variant X2, mRNA	1.154734411
VdnRY5_251	1	1	1275	1296	uv|U09128.1:3334-10218	861	840	Weak	Weak	Suspect[1297,1298];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum geraniol 8-hydroxylase-like (LOC102586037), mRNA	1.617873652
CLCdnRY9_1995	1	1	19	35	uv|M16192.1:1-2517-49	1387	1371	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579806 (LOC102579806), transcript variant X3, mRNA	1.233616037
CLCdnRY9_1995	1	1	11	26	uv|EU360963.1:261-355	77	92	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579806 (LOC102579806), transcript variant X3, mRNA	1.156515035
CLCdnRY10_459	1	1	1256	1272	uv|J02459.1:1-48502-49	43059	43075	Weak	Weak	Suspect[1273,1296];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum 26S proteasome non-ATPase regulatory subunit 14 homolog (LOC102605209), mRNA	1.234567901
SdnRY1_22490	1	1	1270	1285	uv|U02452.1:4310-5466	571	556	Weak	Weak	Suspect[1286,1296];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum chalcone synthase J-like (LOC102590425), mRNA	1.157407407
VdnRY5_323	1	1	863	915	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	4.024767802
SdnRY1_22578	1	1	1257	1273	uv|JX560397.1:83-5970	3662	3678	Weak	Weak	Suspect[1274,1292];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum protein XRI1-like (LOC102585955), transcript variant X2, mRNA	1.238390093
PBdnRY1_5162	1	1	1253	1268	uv|M77169.1:820-5161	1933	1918	Weak	Weak	Suspect[1269,1292];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum caffeoylshikimate esterase (LOC102585209), mRNA	1.160990712
CLCdnRY12_76105	1	1	1	16	uv|L05669.1:7406-7834	129	144	Weak	Weak	None	TRUE_BIOLOGICAL	110456	1	Solanum tuberosum chalcone synthase 1b mRNA, complete cds	1.161890008
CLCdnRY10_8071	1	1	25	40	uv|AF379854.1:3-2710	1297	1282	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum chitotriosidase-1-like (LOC102599450), mRNA	1.163692785
CLCdnRY12_1576	1	1	22	37	uv|NGB00413.1:9419-9516	69	54	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum myb family transcription factor APL-like (PPS4), transcript variant X1, mRNA	1.164596273
SdnRY1_22669	1	1	1261	1276	uv|U29899.1:4697-5948	799	784	Weak	Weak	Suspect[1277,1288];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum heat shock 70 kDa protein-like (LOC102584601), mRNA	1.164596273
PBdnRY1_4535	1	1	1249	1264	uv|DQ188846.1:1639-2515	280	295	Weak	Weak	Suspect[1265,1285];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ubiquitin-conjugating enzyme E2 34-like (LOC102586223), transcript variant X1, mRNA	1.167315175
SdnRY1_22723	1	1	1263	1278	uv|DQ391279.1:13402-14600	1103	1118	Weak	Weak	Suspect[1279,1285];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein-L-isoaspartate O-methyltransferase 1-like (LOC102598632), mRNA	1.167315175
PBdnRY1_49	1	1	1260	1275	uv|EF694056.1:1-945	266	251	Weak	Weak	Suspect[1276,1282];	NO_DATA	1	1	Solanum tuberosum chloroplast, complete genome	1.170046802
CLCdnRY2_62912	1	1	220	1246	uv|KY031734.1:7505-8698	124	1150	Strong	Strong	None	NO_DATA	1	1	Binary vector pHAtC, complete sequence	80.09367681
CLCdnRY2_62912	1	1	46	268	uv|KF947528.1:4361-4749	223	1	Strong	Strong	None	NO_DATA	1	1	Binary vector pHAtC, complete sequence	17.33021077
CLCdnRY2_62912	1	1	37	125	uv|KM062046.1:4514-4739	88	1	Strong	Strong	None	NO_DATA	1	1	Binary vector pHAtC, complete sequence	6.869633099
CLCdnRY2_62912	1	1	1198	1254	uv|KM062046.1:3232-3441	210	154	Strong	Strong	None	NO_DATA	1	1	Binary vector pHAtC, complete sequence	4.371584699
CLCdnRY2_62912	1	1	1	37	uv|AY568055.1:2738-2848	28	64	Strong	Strong	None	NO_DATA	1	1	Binary vector pHAtC, complete sequence	2.81030445
CLCdnRY2_62912	1	1	1255	1281	uv|EU048869.1:850-942	53	79	Strong	Strong	None	NO_DATA	1	1	Binary vector pHAtC, complete sequence	2.029664325
CLCdnRY11_31898	1	1	18	34	uv|M16192.1:1-2517-49	1055	1039	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum F-box/kelch-repeat protein At3g24760 (LOC102603296), mRNA	1.2490242
CLCdnRY10_53456	1	1	22	37	uv|J02459.1:1-48502-49	26941	26926	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum putative disease resistance protein At3g14460 (LOC102599979), transcript variant X6, misc_RNA	1.172791243
CLCdnRY1_293	1	1	20	35	uv|KC702205.1:1-1107	773	788	Weak	Weak	Suspect[1,19];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum 26S proteasome non-ATPase regulatory subunit 8 homolog A (LOC102603250), mRNA	1.172791243
CLCdnRY4_52424	1	1	21	36	uv|J02459.1:1-48502-49	26941	26926	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum putative disease resistance protein At3g14460 (LOC102599979), transcript variant X6, misc_RNA	1.17370892
CLCdnRY10_5023	1	1	1241	1256	uv|M16217.1:2614-2712	9	24	Weak	Weak	Suspect[1257,1274];	NO_DATA	1	1	PREDICTED: Solanum tuberosum beta-xylosidase/alpha-L-arabinofuranosidase 2-like (LOC102589670), mRNA	1.177394035
CLCdnRY3_1515	1	1	1230	1245	uv|KC702209.1:1-2022	221	206	Weak	Weak	Suspect[1246,1269];	TRUE_BIOLOGICAL	196118	1	Solanum tuberosum clone 135C01 unknown mRNA	1.182033097
CLCdnRY12_39456	1	1	4	19	uv|AB009864.2:304-865	534	549	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum GDSL esterase/lipase At1g29670-like (LOC102585753), mRNA	1.185770751
PBdnRY1_13661	1	1	14	29	uv|L08862.1:1-2039	1504	1489	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum short-chain dehydrogenase/reductase 2b-like (LOC102589715), transcript variant X1, mRNA	1.18858954
CLCdnRY11_68439	1	1	13	28	uv|U02450.1:1-153	89	104	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 (LOC102597345), mRNA	1.189532117
SdnRY1_23287	1	1	18	33	uv|JF909482.1:3850-8059	3572	3587	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum 33 kDa ribonucleoprotein, chloroplastic-like (LOC102600250), mRNA	1.191421763
CLCdnRY2_1657	1	1	5	20	uv|AF379854.1:3-2710	1297	1282	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum chitotriosidase-1-like (LOC102599450), mRNA	1.194267516
SdnRY1_23377	1	1	17	32	uv|JN204883.1:1-1492	836	821	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chitinase domain-containing protein 1 (LOC102605383), transcript variant X1, mRNA	1.195219124
CLCdnRY11_22243	1	1	1228	1244	uv|AF129072.1:907-3477	1715	1731	Weak	Weak	Suspect[1245,1252];	NO_DATA	1	1	PREDICTED: Solanum tuberosum disease resistance protein RPH8A-like (LOC107059220), mRNA	1.277955272
CLCdnRY6_30674	1	1	9	25	uv|AF129072.1:907-3477	1731	1715	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum tuberosum disease resistance protein RPH8A-like (LOC107059220), mRNA	1.277955272
SdnRY1_23450	1	1	6	22	uv|KC702181.1:1-1123	224	208	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101268684 (LOC101268684), mRNA	1.278976819
CLCdnRY10_28165	1	1	15	30	uv|JN874480.1:11708-20103	1766	1781	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	357	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592930 (LOC102592930), mRNA	1.199040767
CLCdnRY1_7061	1	1	17	33	uv|KF719004.1:2204-2946	233	249	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum actin-related protein 3-like (LOC102593392), transcript variant X3, mRNA	1.28
CLCdnRY11_76769	1	1	3	19	uv|U29899.1:1847-4463	1968	1952	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum long chain acyl-CoA synthetase 6, peroxisomal-like (LOC102599103), mRNA	1.284109149
CLCdnRY7_10657	1	1	8	24	uv|M18287.1:1-58	29	45	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum tuberosum homoserine kinase-like (LOC102600638), mRNA	1.285140562
CLCdnRY9_11687	1	1	1219	1234	uv|JN204887.1:1-998	437	422	Weak	Weak	Suspect[1235,1245];	NO_DATA	1	1	PREDICTED: Solanum tuberosum L-type lectin-domain containing receptor kinase IV.1-like (LOC102593319), mRNA	1.204819277
CLCdnRY12_18671	1	1	1219	1234	uv|KF719004.1:2204-2946	321	336	Weak	Weak	Suspect[1235,1244];	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum annexin D2-like (LOC102586975), mRNA	1.205787781
CLCdnRY10_18499	1	1	1219	1234	uv|KF719004.1:2204-2946	321	336	Weak	Weak	Suspect[1235,1243];	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum annexin D2-like (LOC102586975), mRNA	1.206757844
SdnRY1_23639	1	1	19	34	uv|M98046.1:2386-3803	200	215	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized protein At2g23090-like (LOC102603581), mRNA	1.207729469
CLCdnRY3_31469	1	1	6	21	uv|AF379854.1:4263-5841	87	72	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum glycerol-3-phosphate 2-O-acyltransferase 6-like (LOC102588829), mRNA	1.208702659
CLCdnRY9_32788	1	1	6	21	uv|AF379854.1:4263-5841	87	72	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum glycerol-3-phosphate 2-O-acyltransferase 6-like (LOC102588829), mRNA	1.208702659
CLCdnRY8_9961	1	1	1190	1220	uv|NGB00733.1:1-51	31	1	Strong	Strong	Suspect[1223,1239];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum alpha-taxilin (LOC102580094), transcript variant X1, mRNA	2.421307506
CLCdnRY8_9961	1	1	1201	1222	uv|JX069762.1:9774-9902-49	69	48	Moderate	Strong	Suspect[1223,1239];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum alpha-taxilin (LOC102580094), transcript variant X1, mRNA	1.694915254
CLCdnRY5_16551	1	1	1211	1227	uv|KM407512.1:886-4985	3582	3598	Weak	Weak	Suspect[1228,1239];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum protein PMR5 (LOC102591356), mRNA	1.291364003
VdnRY6_19148	1	1	883	1199	uv|U09365.1:5556-6239	319	635	Strong	Strong	Suspect[740,778];Suspect[1237,1238];	TRUE_BIOLOGICAL	357	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	25.52504039
VdnRY6_19148	1	1	779	901	uv|AF234313.1:5884-6104	96	221	Strong	Strong	Suspect[740,778];Suspect[1237,1238];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	9.8546042
VdnRY6_19148	1	1	830	931	uv|JX025644.1:5002-5103	1	102	Strong	Strong	Suspect[740,778];Suspect[1237,1238];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	8.158319871
VdnRY6_19148	1	1	1151	1219	uv|JX025643.1:5074-5255	1	69	Strong	Strong	Suspect[740,778];Suspect[1237,1238];	TRUE_BIOLOGICAL	357	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	5.49273021
VdnRY6_19148	1	1	1	47	uv|U10459.1:7105-7271	166	120	Strong	Strong	Suspect[740,778];Suspect[1237,1238];	TRUE_BIOLOGICAL	10639	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	3.715670436
VdnRY6_19148	1	1	152	192	uv|EF411199.1:633-831	17	57	Strong	Strong	Suspect[740,778];Suspect[1237,1238];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	3.231017771
VdnRY6_19148	1	1	692	729	uv|EF411199.1:633-831	151	188	Strong	Strong	Suspect[740,778];Suspect[1237,1238];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	2.988691438
VdnRY6_19148	1	1	115	146	uv|AF067142.1:51-138	47	16	Strong	Strong	Suspect[740,778];Suspect[1237,1238];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	2.504038772
VdnRY6_19148	1	1	711	739	uv|AY423864.1:5350-5441	21	50	Weak	Strong	Suspect[740,778];Suspect[1237,1238];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	2.261712439
VdnRY6_19148	1	1	114	141	uv|GQ489187.1:1-238	89	62	Moderate	Strong	Suspect[740,778];Suspect[1237,1238];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	2.180936995
VdnRY6_19148	1	1	146	172	uv|NGB00987.1:615-833	49	75	Moderate	Strong	Suspect[740,778];Suspect[1237,1238];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	2.100161551
VdnRY6_19148	1	1	708	734	uv|NGB00358.1:2687-2859	100	126	Moderate	Strong	Suspect[740,778];Suspect[1237,1238];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	2.100161551
VdnRY6_19148	1	1	711	736	uv|HM162846.2:3253-3645	27	52	Moderate	Strong	Suspect[740,778];Suspect[1237,1238];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	2.019386107
VdnRY6_19148	1	1	144	166	uv|LC029925.1:7933-8031	46	24	Weak	Strong	Suspect[740,778];Suspect[1237,1238];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	1.777059774
VdnRY6_19148	1	1	1218	1236	uv|KM062045.1:3072-3217	78	96	Moderate	Strong	Suspect[740,778];Suspect[1237,1238];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	1.453957997
CLCdnRY10_76332	1	1	24	41	uv|NGB00153.1:1-234	191	174	Weak	Weak	Suspect[1,23];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum phospholipase D alpha 1-like (LOC102591907), mRNA	1.373182553
CLCdnRY9_69176	1	1	23	40	uv|NGB00153.1:1-234	191	174	Weak	Weak	Suspect[1,22];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum phospholipase D alpha 1-like (LOC102591907), mRNA	1.374292643
SdnRY1_23800	1	1	1197	1212	uv|J01636.1:1-7477	1667	1682	Weak	Weak	Suspect[1213,1235];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum protein GrpE (LOC102605233), transcript variant X2, mRNA	1.214574899
CLCdnRY2_9412	1	1	1194	1224	uv|NGB00733.1:1-51	31	1	Strong	Strong	Suspect[1227,1234];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum alpha-taxilin (LOC102580094), transcript variant X1, mRNA	2.431118314
CLCdnRY2_9412	1	1	1205	1226	uv|JX069762.1:9774-9902-49	69	48	Moderate	Strong	Suspect[1227,1234];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum alpha-taxilin (LOC102580094), transcript variant X1, mRNA	1.70178282
CLCdnRY7_29632	1	1	1195	1210	uv|KC702236.1:1-1024	867	852	Weak	Weak	Suspect[1211,1233];	TRUE_BIOLOGICAL	196118	1	Lycopersicon esculentum clone 113902F, mRNA sequence	1.216545012
SdnRY1_23848	1	1	3	18	uv|AF379854.1:4263-5841	381	366	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598066 (LOC102598066), ncRNA	1.216545012
CLCdnRY11_16922	1	1	1206	1223	uv|KC702230.1:1-1019	740	757	Weak	Weak	Suspect[1224,1232];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum adenylate kinase, chloroplastic (LOC102604857), mRNA	1.37987013
CLCdnRY11_655	1	1	1205	1221	uv|JQ394799.1:1-1559	1491	1475	Weak	Weak	Suspect[1222,1231];	NO_DATA	1	1	PREDICTED: Solanum tuberosum thylakoid membrane protein slr0575 (LOC102580323), mRNA	1.299756296
CLCdnRY10_2637	1	1	3	18	uv|AF025844.2:1-1301	804	819	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	6134	1	PREDICTED: Capsicum annuum putative late blight resistance protein homolog R1A-3 (LOC107874543), mRNA	1.219512195
SdnRY1_23946	1	1	24	39	uv|J02459.1:1-48502-49	42091	42076	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum protein FAR1-RELATED SEQUENCE 5-like (LOC102592457), transcript variant X4, mRNA	1.221498371
CLCdnRY10_39057	1	1	1197	1213	uv|X05868.1:399-578	138	122	Weak	Weak	Suspect[1214,1226];	NO_DATA	1	1	PREDICTED: Solanum tuberosum expansin-A3-like (LOC102600255), mRNA	1.305057096
CLCdnRY10_45051	1	1	1200	1215	uv|U89961.1:1-4240	2707	2722	Weak	Weak	Suspect[1216,1225];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum iron-sulfur protein NUBPL (LOC102588488), transcript variant X1, mRNA	1.224489796
SdnRY1_24080	1	1	1207	1223	uv|U02430.1:90-146	26	10	Weak	Weak	None	TRUE_BIOLOGICAL	140052	1	Solanum pennellii chromosome ch04, complete genome	1.308258381
CLCdnRY11_38527	1	1	1197	1212	uv|KC702236.1:1-1024	867	852	Weak	Weak	Suspect[1213,1223];	TRUE_BIOLOGICAL	196118	1	Lycopersicon esculentum clone 113902F, mRNA sequence	1.226492232
SdnRY1_24098	1	1	1187	1202	uv|EF437940.1:3516-6082	1807	1792	Weak	Weak	Suspect[1203,1222];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable 2-oxoglutarate-dependent dioxygenase AOP1.2 (LOC102589018), mRNA	1.227495908
VdnRY5_319	1	1	841	893	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	4.262295082
CLCdnRY10_83401	1	1	1197	1214	uv|GQ231553.1:512-1019	352	335	Weak	Weak	Suspect[1215,1219];	TRUE_BIOLOGICAL	1301	1	PREDICTED: Solanum tuberosum eukaryotic translation initiation factor 5B (LOC102599659), transcript variant X2, mRNA	1.394585726
CLCdnRY9_76720	1	1	1197	1214	uv|GQ231553.1:512-1019	352	335	Weak	Weak	Suspect[1215,1219];	TRUE_BIOLOGICAL	1301	1	PREDICTED: Solanum tuberosum eukaryotic translation initiation factor 5B (LOC102599659), transcript variant X2, mRNA	1.394585726
CLCdnRY2_13844	1	1	1190	1205	uv|U13864.1:807-935	93	78	Weak	Weak	Suspect[1206,1219];	NO_DATA	1	1	PREDICTED: Solanum tuberosum calmodulin-like protein 1 (LOC102591062), mRNA	1.230516817
CLCdnRY11_65698	1	1	1198	1213	uv|GU339044.1:3206-3282	20	5	Weak	Weak	Suspect[1214,1218];	NO_DATA	1	1	PREDICTED: Solanum tuberosum geraniol 8-hydroxylase-like (LOC102602540), mRNA	1.231527094
SdnRY1_24263	1	1	1188	1205	uv|AF379854.1:3-2710	700	683	Weak	Weak	Suspect[1206,1215];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum tetratricopeptide repeat protein 1 (LOC102592083), mRNA	1.399176955
CLCdnRY12_1923	1	1	13	28	uv|KF719005.1:2205-5132	2380	2395	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum endo-1,3;1,4-beta-D-glucanase-like (LOC102590056), transcript variant X4, mRNA	1.236603462
SdnRY1_24315	1	1	24	39	uv|J02459.1:1-48502-49	42091	42076	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum protein FAR1-RELATED SEQUENCE 5-like (LOC102592457), transcript variant X4, mRNA	1.236603462
CLCdnRY10_50841	1	1	20	35	uv|NGB01020.1:535-633	11	26	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	Solanum demissum R8 gene cluster, partial sequence	1.238645747
CLCdnRY10_25205	1	1	1192	1207	uv|AF379854.1:3-2710	822	807	Weak	Weak	Suspect[1210,1210];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum methylesterase 17 (LOC102584108), mRNA	1.239669421
CLCdnRY10_25205	1	1	1194	1209	uv|KF718979.1:2206-6730	1395	1410	Weak	Weak	Suspect[1210,1210];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum methylesterase 17 (LOC102584108), mRNA	1.239669421
CLCdnRY10_4458	1	1	18	35	uv|U89960.1:4738-7717	1336	1319	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581913 (LOC102581913), mRNA	1.406120761
CLCdnRY9_57264	1	1	8	24	uv|J02459.1:1-48502-49	7744	7728	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (LOC102587090), transcript variant X4, mRNA	1.324503311
CLCdnRY7_22733	1	1	1187	1202	uv|KY031724.1:1-5301	1725	1740	Weak	Weak	Suspect[1203,1206];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600551 (LOC102600551), transcript variant X1, mRNA	1.243781095
SdnRY1_24495	1	1	1184	1199	uv|J02459.1:1-48502-49	33875	33890	Weak	Weak	Suspect[1200,1206];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 (LOC107059867), mRNA	1.243781095
CLCdnRY8_42175	1	1	1183	1198	uv|U03992.1:408-1934	1232	1217	Weak	Weak	Suspect[1199,1205];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597716 (LOC102597716), mRNA	1.244813278
CLCdnRY7_7474	1	1	1185	1200	uv|M16217.1:1-2529	418	403	Weak	Weak	Suspect[1201,1205];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum premnaspirodiene oxygenase-like (LOC102601724), mRNA	1.244813278
CLCdnRY11_54563	1	1	1181	1202	uv|KJ541666.1:1-220	59	38	Weak	Weak	None	TRUE_BIOLOGICAL	4895	1		1.747088186
CLCdnRY11_54563	1	1	1181	1198	uv|FJ750577.1:368-2560	525	542	Weak	Weak	None	TRUE_BIOLOGICAL	4447	1		1.414309484
CLCdnRY11_9368	1	1	21	37	uv|M16192.1:1-2517-49	2452	2436	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum pennellii transcription factor MYB1R1 (LOC107023103), mRNA	1.331114809
CLCdnRY11_38820	1	1	9	25	uv|M34305.1:3197-4538	558	542	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum nitronate monooxygenase (LOC102604305), mRNA	1.331114809
CLCdnRY6_566	1	1	9	26	uv|AY568055.1:6692-7837	773	790	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum tuberosum phosphoglucan phosphatase LSF2, chloroplastic (LOC102605583), mRNA	1.417848207
CLCdnRY11_25998	1	1	1182	1197	uv|AF379854.1:3-2710	822	807	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum methylesterase 17 (LOC102584108), mRNA	1.251042535
CLCdnRY11_25998	1	1	1184	1199	uv|KF718979.1:2206-6730	1395	1410	Weak	Weak	None	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum methylesterase 17 (LOC102584108), mRNA	1.251042535
CLCdnRY1_10652	1	1	15	30	uv|KC702165.1:1-1023	744	729	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum F-box/kelch-repeat protein At3g23880-like (LOC107062382), mRNA	1.251042535
CLCdnRY2_7259	1	1	1177	1192	uv|M16217.1:1-2529	418	403	Weak	Weak	Suspect[1193,1197];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum premnaspirodiene oxygenase-like (LOC102601724), mRNA	1.253132832
PBdnRY1_531	1	1	1166	1181	uv|KC702194.1:1-1023	947	962	Weak	Weak	Suspect[1182,1197];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable WRKY transcription factor 65 (LOC102597639), transcript variant X1, mRNA	1.253132832
VdnRY5_5325	1	1	13	28	uv|L08860.1:1-1129	753	738	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum serine/threonine-protein phosphatase PP2A-5 catalytic subunit (LOC102590351), mRNA	1.254180602
SdnRY1_24718	1	1	16	31	uv|U09365.1:787-1365	320	305	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum eukaryotic translation initiation factor 3 subunit H (LOC102601497), transcript variant X1, mRNA	1.254180602
CLCdnRY1_4638	1	1	1178	1193	uv|M34298.1:3143-4604	365	350	Weak	Weak	Suspect[1194,1195];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum eukaryotic translation initiation factor 3 subunit H-like (LOC102604600), mRNA	1.255230126
CLCdnRY11_160	1	1	7	22	uv|JN874480.1:1050-2714	942	927	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (LOC102606161), mRNA	1.258389262
CLCdnRY5_148	1	1	7	22	uv|JN874480.1:1050-2714	942	927	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (LOC102606161), mRNA	1.258389262
CLCdnRY7_7669	1	1	1171	1188	uv|JN874480.1:1050-2714	497	514	Weak	Weak	Suspect[1189,1190];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum proteasome subunit alpha type-3-like (LOC102581342), mRNA	1.428571429
CLCdnRY10_16584	1	1	1169	1184	uv|EU496100.1:270-2269	1276	1261	Weak	Weak	Suspect[1185,1188];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable xyloglucan endotransglucosylase/hydrolase protein 23 (LOC102591177), mRNA	1.262626263
CLCdnRY11_54149	1	1	1166	1181	uv|AF379854.1:3-2710	683	698	Weak	Weak	Suspect[1182,1187];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum blue copper protein-like (LOC102581132), mRNA	1.263689975
VdnRY3_59652	1	1	2	17	uv|HQ418395.1:5572-6400	583	568	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	PREDICTED: Solanum tuberosum beta-D-glucosyl crocetin beta-1,6-glucosyltransferase-like (LOC107063420), partial mRNA	1.263689975
CLCdnRY10_1301	1	1	1165	1181	uv|U13860.1:6124-7626-49	480	496	Weak	Weak	Suspect[1182,1186];	TRUE_BIOLOGICAL	140052	1	PREDICTED: Solanum tuberosum uncharacterized protein At2g34460, chloroplastic-like (LOC102588666), mRNA	1.349072513
SdnRY1_24998	1	1	1168	1184	uv|KF680545.1:1-2837	502	486	Weak	Weak	Suspect[1185,1185];	NO_DATA	1	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase SINAT2-like (LOC102590784), mRNA	1.35021097
CLCdnRY3_30932	1	1	11	26	uv|JN874480.1:1050-2714	1076	1061	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum peroxidase 19 (LOC102581969), mRNA	1.266891892
SdnRY1_25021	1	1	1157	1172	uv|KC614689.1:1-590	487	502	Weak	Weak	Suspect[1173,1184];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Nicotiana tabacum uncharacterized LOC107774625 (LOC107774625), mRNA	1.266891892
SdnRY1_25036	1	1	7	23	uv|M64753.1:1943-3400	1276	1292	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	590	1	Solanum demissum isolate 195A19 disease resistance protein R3a-like protein pseudogene, partial sequence	1.35249366
CLCdnRY12_12087	1	1	1160	1175	uv|JN874480.1:1050-2714	513	498	Weak	Weak	Suspect[1176,1183];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583966 (LOC102583966), mRNA	1.267962806
SdnRY1_25044	1	1	4	19	uv|J02459.1:1-48502-49	8979	8964	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like (LOC102581021), mRNA	1.267962806
CLCdnRY5_1268	1	1	1164	1180	uv|U13860.1:6124-7626-49	480	496	Weak	Weak	Suspect[1181,1182];	TRUE_BIOLOGICAL	140052	1	PREDICTED: Solanum tuberosum uncharacterized protein At2g34460, chloroplastic-like (LOC102588666), mRNA	1.353637902
SdnRY1_25067	1	1	1159	1174	uv|M77169.1:820-5161	2573	2588	Weak	Weak	Suspect[1175,1182];	TRUE_BIOLOGICAL	1485	1	Solanum lycopersicum cultivar I-3 chromosome 2	1.269035533
SdnRY1_25092	1	1	20	35	uv|J02459.1:1-48502-49	24086	24071	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor 5-like (LOC102585187), mRNA	1.270110076
SdnRY1_25104	1	1	1162	1177	uv|JN874480.1:1050-2714	289	274	Weak	Weak	Suspect[1178,1181];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum protein indeterminate-domain 9 (LOC102587716), mRNA	1.270110076
CLCdnRY10_63713	1	1	6	21	uv|FJ931533.1:7978-12753-49	886	901	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum kinesin-II 95 kDa subunit (LOC102582662), mRNA	1.270110076
CLCdnRY10_12463	1	1	1163	1178	uv|X06779.1:1-4734	4176	4161	Weak	Weak	Suspect[1179,1180];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum thylakoid lumenal protein TL20.3, chloroplastic (LOC102582546), mRNA	1.271186441
CLCdnRY10_46260	1	1	1154	1169	uv|KM407512.1:886-4985	3198	3213	Weak	Weak	Suspect[1170,1180];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum dof zinc finger protein DOF2.1-like (LOC102592791), mRNA	1.271186441
CLCdnRY11_38509	1	1	1140	1156	uv|M28829.1:1-8684-49	7608	7592	Weak	Weak	Suspect[1157,1179];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable GTP-binding protein OBGM, mitochondrial (LOC102593776), transcript variant X1, mRNA	1.357082273
SdnRY1_25166	1	1	1151	1168	uv|U67875.1:18-1316	421	438	Weak	Weak	Suspect[1169,1178];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum tropinone reductase homolog At5g06060-like (LOC102600938), mRNA	1.443123939
CLCdnRY11_48579	1	1	8	23	uv|JX560334.1:1968-3342	1104	1119	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 6 (LOC102585731), mRNA	1.274426508
VdnRY3_24595	1	1	2	17	uv|HQ418395.1:5572-6400	583	568	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101250467 (LOC101250467), mRNA	1.279863481
SdnRY1_25374	1	1	7	23	uv|M64753.1:1943-3400	1276	1292	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	590	1	PREDICTED: Solanum tuberosum putative disease resistance RPP13-like protein 1 (LOC102591499), misc_RNA	1.367521368
SdnRY1_25404	1	1	1147	1163	uv|U02427.1:2631-2729	30	14	Weak	Weak	Suspect[1164,1169];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch03, complete genome	1.368691189
SdnRY1_25422	1	1	13	28	uv|M16217.1:1-2529	2354	2339	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum pumilio homolog 24 (LOC102600058), mRNA	1.284246575
CLCdnRY11_25403	1	1	1144	1159	uv|JN874480.1:6795-9434	591	576	Weak	Weak	Suspect[1160,1165];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor RAP2-12-like (LOC102586220), transcript variant X2, mRNA	1.287553648
SdnRY1_25511	1	1	8	23	uv|AY597273.1:2264-2316	8	23	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC102603395 (LOC102603395), transcript variant X1, mRNA	1.287553648
CLCdnRY8_23313	1	1	1150	1165	uv|KF719005.1:2205-5132	547	532	Weak	Weak	None	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum tRNA dimethylallyltransferase 2 (LOC102594223), transcript variant X2, mRNA	1.287553648
CLCdnRY8_10899	1	1	21	37	uv|GU593054.1:6136-8806	367	383	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chlorophyllase-2, chloroplastic-like (LOC102584485), mRNA	1.376936317
VdnRY4_1845	1	1	1124	1140	uv|Z46234.1:7923-9273	801	817	Weak	Weak	Suspect[1141,1159];	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (LOC102596435), mRNA	1.380500431
CLCdnRY6_26317	1	1	1140	1155	uv|X75460.1:3528-3670	30	15	Weak	Weak	Suspect[1156,1159];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum protein unc-45 homolog A (LOC102579738), mRNA	1.294219154
SdnRY1_25643	1	1	1127	1142	uv|V00604.2:1-6407-49	4213	4198	Weak	Weak	Suspect[1143,1159];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum pathogenesis-related protein PR-1 (LOC102580826), mRNA	1.294219154
CLCdnRY12_3185	1	1	25	40	uv|M16217.1:1-2529	1959	1944	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein C2-DOMAIN ABA-RELATED 7-like (LOC102585714), mRNA	1.294219154
SdnRY1_25706	1	1	23	38	uv|KU936036.1:2396-3564	999	984	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589298 (LOC102589298), mRNA	1.297577855
CLCdnRY4_11933	1	1	1141	1156	uv|JN874480.1:1050-2714	513	498	Weak	Weak	None	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum coatomer subunit epsilon-1 (LOC102581548), mRNA	1.297577855
SdnRY1_25755	1	1	1128	1143	uv|J02459.1:1-48502-49	25856	25871	Weak	Weak	Suspect[1144,1155];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585256 (LOC102585256), transcript variant X1, ncRNA	1.298701299
CLCdnRY7_207	1	1	16	31	uv|KF853601.1:1021-3588	1961	1976	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum acetolactate synthase 2, chloroplastic-like (LOC102595762), mRNA	1.298701299
VdnRY3_10402	1	1	18	33	uv|KC702178.1:1-2022	442	457	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589913 (LOC102589913), mRNA	1.298701299
CLCdnRY11_19409	1	1	1114	1130	uv|AF379854.1:4263-5841	1158	1174	Weak	Weak	Suspect[1131,1154];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein FLX-like 1 (LOC102589885), transcript variant X2, mRNA	1.386481802
SdnRY1_25856	1	1	7	23	uv|M64753.1:1943-3400	1276	1292	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	590	1	PREDICTED: Solanum tuberosum putative disease resistance RPP13-like protein 1 (LOC102591499), misc_RNA	1.390095569
SdnRY1_25890	1	1	5	20	uv|JX310867.1:868-3760	1637	1622	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	1224	1	PREDICTED: Solanum tuberosum protein phosphatase 2C 37-like (LOC102599348), mRNA	1.304347826
PBdnRY1_357	1	1	4	20	uv|U13189.1:8235-8334	83	67	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum pennellii pre-mRNA cleavage factor Im 25 kDa subunit 2-like (LOC107022361), mRNA	1.39494333
CLCdnRY8_28953	1	1	14	31	uv|U02436.1:3152-4436	616	633	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592462 (LOC102592462), transcript variant X1, mRNA	1.487314086
PBdnRY1_7108	1	1	15	30	uv|JN874480.1:1050-2714	516	501	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum proteasome subunit beta type-7-A (LOC102603340), mRNA	1.313485114
CLCdnRY11_58366	1	1	12	29	uv|M77169.1:820-5161	2534	2517	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum zinc-finger homeodomain protein 10-like (LOC102586742), mRNA	1.49122807
PBdnRY1_14302	1	1	1111	1127	uv|GU593054.1:6136-8806	383	367	Weak	Weak	Suspect[1128,1140];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chlorophyllase-2, chloroplastic-like (LOC102584485), mRNA	1.403508772
CLCdnRY1_21874	1	1	4	56	uv|KF719004.1:2204-2946	113	61	Strong	Strong	Suspect[1,3];	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum protein ABIL3 (LOC102598514), transcript variant X1, mRNA	4.569420035
CLCdnRY11_13541	1	1	1105	1120	uv|KF680544.1:2357-2669	67	52	Weak	Weak	Suspect[1121,1137];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein SYS1 homolog (LOC102603350), transcript variant X1, mRNA	1.319261214
CLCdnRY3_7277	1	1	9	27	uv|J02459.1:1-48502-49	24608	24626	Moderate	Moderate	Suspect[1,8];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum thioredoxin reductase NTRC-like (LOC102585390), mRNA	1.584507042
VdnRY2_28450	1	1	1	16	uv|EU186086.1:9349-10480-30	340	325	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein LTV1 homolog (LOC102583152), mRNA	1.3239188
CLCdnRY9_21036	1	1	1115	1130	uv|X70276.1:4179-4959	101	86	Weak	Weak	Suspect[1131,1132];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum MADS-box protein SOC1-like (LOC102586019), transcript variant X3, mRNA	1.325088339
SdnRY1_26311	1	1	5	20	uv|FJ750577.1:368-2560	372	387	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4447	1	Solanum demissum R8 gene cluster, partial sequence	1.325088339
SdnRY1_26370	1	1	9	25	uv|KF718990.1:2209-4765	1232	1248	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum tuberosum uncharacterized protein At1g51745-like (LOC102596664), mRNA	1.415929204
SdnRY1_26360	1	1	21	36	uv|AF379854.1:3-2710	678	693	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum cyclin-dependent kinase D-3-like (LOC102591981), mRNA	1.327433628
CLCdnRY9_94	1	1	272	324	uv|KF719004.1:2204-2946	113	61	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2c gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	4.609929078
SdnRY1_26440	1	1	1107	1123	uv|KF680544.1:2357-2669	54	70	Weak	Weak	Suspect[1124,1127];	NO_DATA	1	1	PREDICTED: Solanum tuberosum agamous-like MADS-box protein AGL62 (LOC102591375), mRNA	1.419698314
PBdnRY1_12684	1	1	3	20	uv|JN874480.1:1050-2714	514	497	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum proteasome subunit alpha type-3-like (LOC102581342), mRNA	1.509769094
CLCdnRY2_28247	1	1	6	21	uv|KC702187.1:1-1023	686	671	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g20540-like (LOC102587564), mRNA	1.333333333
CLCdnRY1_25951	1	1	1099	1115	uv|NGB00355.1:4529-4626	74	90	Weak	Weak	Suspect[1116,1124];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum WAT1-related protein At3g30340-like (LOC102603735), mRNA	1.423487544
CLCdnRY10_47628	1	1	1089	1106	uv|M16192.1:1-2517-49	1736	1719	Weak	Weak	Suspect[1107,1123];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583464 (LOC102583464), ncRNA	1.513802315
CLCdnRY7_32211	1	1	10	27	uv|M77169.1:820-5161	2376	2393	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum lycopersicum O-fucosyltransferase 29 (LOC101251896), mRNA	1.513802315
PBdnRY1_12227	1	1	1091	1106	uv|KC702186.1:1-274	193	178	Weak	Weak	Suspect[1107,1122];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable plastid-lipid-associated protein 13, chloroplastic (LOC102596905), mRNA	1.336898396
SdnRY1_26595	1	1	1096	1111	uv|M34298.1:3143-4604	1096	1081	Weak	Weak	Suspect[1112,1121];	TRUE_BIOLOGICAL	6237	1	Solanum tuberosum chromosome 1 mitochondrion, complete sequence	1.33809099
CLCdnRY2_30554	1	1	10	27	uv|M77169.1:820-5161	2376	2393	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum lycopersicum O-fucosyltransferase 29 (LOC101251896), mRNA	1.517857143
PBdnRY1_5695	1	1	18	34	uv|KC702178.1:1-2022	326	310	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum protein EXORDIUM-like (LOC102579389), mRNA	1.428571429
CLCdnRY3_28342	1	1	1	16	uv|Z50149.1:1-266	93	108	Weak	Weak	None	TRUE_BIOLOGICAL	482	1	PREDICTED: Solanum tuberosum cationic peroxidase 1-like (LOC102601606), mRNA	1.339285714
SdnRY1_26635	1	1	1084	1099	uv|Z32692.1:5183-6220	959	974	Weak	Weak	Suspect[1100,1119];	TRUE_BIOLOGICAL	10242	1	PREDICTED: Solanum tuberosum aminoacyl tRNA synthase complex-interacting multifunctional protein 1 (LOC102589855), mRNA	1.340482574
SdnRY1_26686	1	1	17	35	uv|U47120.2:791-908	50	68	Moderate	Moderate	Suspect[1,16];	NO_DATA	1	1	P.megasperma gene for 28S ribosomal RNA	1.611459266
CLCdnRY11_59275	1	1	11	26	uv|AF061923.1:29-1852	1590	1575	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579800 (LOC102579800), transcript variant X3, mRNA	1.342882722
CLCdnRY10_7437	1	1	11	26	uv|KF718990.1:2209-4765	292	307	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum tuberosum putative L-ascorbate peroxidase 6 (LOC102579602), transcript variant X2, mRNA	1.342882722
CLCdnRY11_2972	1	1	2	17	uv|NGB00403.1:1-1303	703	688	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase MBR2-like (LOC102580028), transcript variant X3, mRNA	1.342882722
CLCdnRY10_2264	1	1	1095	1110	uv|KC702237.1:1-1024	399	414	Weak	Weak	Suspect[1111,1116];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable aquaporin PIP2-1 (LOC102596028), mRNA	1.344086022
CLCdnRY11_6744	1	1	14	29	uv|U89960.1:1471-2257	774	759	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	4892	1	Solanum tuberosum auxin-responsive protein IAA14-like (IAA2), mRNA<>Solanum tuberosum auxin/indole-3-acetic acid (IAA2) mRNA, complete cds	1.34529148
CLCdnRY12_20616	1	1	10	26	uv|X51450.1:2521-3852	376	360	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein argonaute 18-like (LOC102582242), transcript variant X2, mRNA	1.436265709
CLCdnRY11_26556	1	1	24	39	uv|JX560397.1:83-5970	3747	3732	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum proteasome subunit beta type-6 (LOC102587439), mRNA	1.347708895
CLCdnRY10_49177	1	1	16	32	uv|KF718979.1:2206-6730	1632	1648	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum delta(12)-acyl-lipid-desaturase-like (LOC102584924), transcript variant X2, mRNA	1.442741208
CLCdnRY10_11294	1	1	1085	1100	uv|KF718979.1:2206-6730	3777	3792	Weak	Weak	Suspect[1101,1109];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum protein CDI-like (LOC102599014), transcript variant X1, mRNA	1.352569883
CLCdnRY11_61807	1	1	17	32	uv|L05081.1:2594-3343	357	372	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein PAF1 homolog (LOC102605929), transcript variant X5, mRNA	1.353790614
CLCdnRY12_17334	1	1	20	35	uv|M16192.1:1-2517-49	1085	1070	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum transcription factor Pur-alpha 1 (LOC102589727), transcript variant X1, mRNA	1.353790614
CLCdnRY10_47663	1	1	1088	1106	uv|U67875.1:18-1316	696	678	Moderate	Moderate	None	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum lycopersicum receptor-like protein 14 (LOC112940036), mRNA	1.627486438
CLCdnRY12_1449	1	1	1073	1088	uv|U02447.1:1-1009	722	707	Weak	Weak	Suspect[1089,1105];	TRUE_BIOLOGICAL	186765	1	PREDICTED: Solanum tuberosum quinone oxidoreductase PIG3-like (LOC102583953), mRNA	1.357466063
CLCdnRY8_41256	1	1	1077	1092	uv|DQ883656.3:1-740	211	226	Weak	Weak	Suspect[1093,1104];	NO_DATA	1	1	PREDICTED: Solanum tuberosum NAC domain-containing protein 73 (LOC102580833), transcript variant X1, mRNA	1.358695652
CLCdnRY11_30755	1	1	1080	1095	uv|L08860.1:1134-1231	45	60	Weak	Weak	Suspect[1096,1103];	NO_DATA	1	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 79B8-like (LOC107061873), mRNA	1.359927471
SdnRY1_27081	1	1	1059	1076	uv|KC702228.1:1-1023	48	31	None	Weak	Suspect[1088,1102];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum U2 small nuclear ribonucleoprotein B''-like (LOC102600261), mRNA	1.542649728
VdnRY5_9162	1	1	1081	1096	uv|X70481.1:3564-4492	381	396	Weak	Weak	Suspect[1097,1102];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum SEC23-interacting protein (LOC102592627), mRNA	1.361161525
SdnRY1_27081	1	1	1072	1087	uv|AY568055.1:6692-7837	589	574	Weak	Weak	Suspect[1088,1102];	NO_DATA	1	1	PREDICTED: Solanum tuberosum U2 small nuclear ribonucleoprotein B''-like (LOC102600261), mRNA	1.361161525
VdnRY5_320	1	1	940	980	uv|KF719004.1:2204-2946	73	113	Weak	Moderate	None	TRUE_BIOLOGICAL	3803	1	Solanum tuberosum ribulose bisphosphate carboxylase small chain C, chloroplastic-like (RBCS-C), mRNA<>Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds	3.633060854
VdnRY5_320	1	1	841	872	uv|JX992842.1:2542-2849	270	301	Moderate	Moderate	None	NO_DATA	1	1	Solanum tuberosum ribulose bisphosphate carboxylase small chain C, chloroplastic-like (RBCS-C), mRNA<>Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds	2.815622162
CLCdnRY4_2404	1	1	25	41	uv|KC702167.1:1-1135	913	929	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum methionine aminopeptidase 1B, chloroplastic (LOC102585013), transcript variant X1, mRNA	1.453224342
CLCdnRY11_18667	1	1	1079	1094	uv|KF718976.1:2961-3161	15	30	Weak	Weak	Suspect[1095,1101];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 1-aminocyclopropane-1-carboxylate oxidase 4 (LOC102584001), mRNA	1.36239782
CLCdnRY3_20403	1	1	1083	1100	uv|HQ418395.1:7430-7530	54	71	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum polyadenylate-binding protein-interacting protein 12-like (LOC102586932), transcript variant X2, mRNA	1.545454545
CLCdnRY2_31770	1	1	10	25	uv|M98046.1:2386-3803	276	261	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative ABC transporter C family member 15 (LOC102589832), mRNA	1.363636364
CLCdnRY3_40495	1	1	7	22	uv|U89671.1:1-253	90	75	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum protein ODORANT1-like (LOC102606052), mRNA	1.366120219
PBdnRY1_3851	1	1	13	29	uv|DQ883642.3:1-494	51	35	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	Solanum tuberosum red chlorophyll catabolite reductase, chloroplastic-like (LOC102591737), mRNA<>Solanum tuberosum cultivar Kexin-4 red chlorophyll catabolite reductase mRNA, complete cds	1.459854015
PBdnRY1_4325	1	1	1060	1075	uv|J02459.1:1-48502-49	24624	24609	Weak	Weak	Suspect[1076,1093];	TRUE_BIOLOGICAL	10699	1	Solanum tuberosum chlorophyll a-b binding protein 4, chloroplastic-like (LOC102596966), mRNA<>Solanum tuberosum mRNA for chlorophyll a/b binding protein (cab1 gene)	1.372369625
CLCdnRY12_11001	1	1	22	38	uv|AY962893.1:2004-2563	175	191	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum pennellii proteasome subunit alpha type-7 (LOC107008131), mRNA	1.465201465
PBdnRY1_14133	1	1	22	37	uv|KF719005.1:2205-5132	1644	1659	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	3701	1	Solanum tuberosum SNF1-related protein kinase regulatory subunit beta-1-like (LOC102591352), mRNA<>Solanum tuberosum clone 097D06 GAL83-like protein mRNA, complete cds	1.374885426
SdnRY1_27456	1	1	16	31	uv|AY093584.1:3788-6062	988	973	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	5052	1		1.377410468
CLCdnRY4_28335	1	1	1063	1078	uv|M35007.1:2730-3838	1023	1008	Weak	Weak	Suspect[1079,1086];	NO_DATA	1	1	PREDICTED: Solanum tuberosum NECAP-like protein CG9132 (LOC102595117), mRNA	1.38121547
SdnRY1_27538	1	1	25	41	uv|U02436.1:3152-4436	666	682	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum beta-glucosidase 44-like (LOC102579818), mRNA	1.474654378
SdnRY1_27538	1	1	31	46	uv|AF379854.1:4263-5841	693	678	None	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum beta-glucosidase 44-like (LOC102579818), mRNA	1.382488479
SdnRY1_27628	1	1	1065	1080	uv|KC702194.1:1-1023	187	172	Weak	Weak	Suspect[1081,1082];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum receptor-like protein 12 (LOC102593483), mRNA	1.386321627
CLCdnRY8_15710	1	1	20	35	uv|GU593055.1:13024-13902-49	908	893	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum premnaspirodiene oxygenase-like (LOC102594554), mRNA	1.390176089
CLCdnRY10_85194	1	1	15	30	uv|KF718979.1:2206-6730	2218	2233	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum transcription factor MYB12 (LOC102605418), mRNA	1.39275766
CLCdnRY1_20839	1	1	24	39	uv|J02482.1:1-5386-49	3344	3329	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum BOI-related E3 ubiquitin-protein ligase 1-like (LOC102594630), mRNA	1.39275766
CLCdnRY1_20839	1	1	25	40	uv|U09128.1:3334-10218	6636	6621	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum BOI-related E3 ubiquitin-protein ligase 1-like (LOC102594630), mRNA	1.39275766
PBdnRY1_10350	1	1	2	17	uv|U55760.1:1-2749	541	556	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	PREDICTED: Solanum tuberosum V-type proton ATPase subunit E-like (LOC102589135), mRNA	1.394052045
CLCdnRY11_24732	1	1	19	34	uv|J02459.1:1-48502-49	29819	29804	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	10699	1	Lycopersicon pimpinellifolium orion Hcr9 gene cluster, complete sequence	1.394052045
CLCdnRY1_10096	1	1	1054	1071	uv|KY031735.1:1-4680	827	810	Weak	Weak	Suspect[1072,1073];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum syntaxin-52-like (LOC102591530), mRNA	1.584342964
SdnRY1_27898	1	1	1037	1053	uv|NGB00051.1:1428-2848	1314	1298	Weak	Weak	Suspect[1054,1072];	NO_DATA	1	1	PREDICTED: Solanum tuberosum leucine-rich repeat extensin-like protein 3 (LOC102598102), mRNA	1.492537313
CLCdnRY1_23899	1	1	1052	1067	uv|GU593054.1:1-1305	561	546	Weak	Weak	Suspect[1068,1072];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum F-box protein At1g78100 (LOC102601177), transcript variant X4, mRNA	1.399253731
SdnRY1_27898	1	1	1032	1047	uv|NGB00051.1:1428-2848	1313	1298	None	Weak	Suspect[1054,1072];	NO_DATA	1	1	PREDICTED: Solanum tuberosum leucine-rich repeat extensin-like protein 3 (LOC102598102), mRNA	1.399253731
SdnRY1_27951	1	1	11	26	uv|AF151088.1:607-1233	132	117	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At1g34160 (LOC102588622), mRNA	1.401869159
CLCdnRY12_3497	1	1	1030	1047	uv|FJ160466.1:1899-7260-49	3669	3652	Weak	Weak	Suspect[1048,1065];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599758 (LOC102599758), mRNA	1.596244131
PBdnRY1_4716	1	1	1025	1041	uv|JQ927446.1:4885-6835-49	997	981	Weak	Weak	Suspect[1042,1064];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable WRKY transcription factor 70 (LOC102581335), mRNA	1.503759398
SdnRY1_28102	1	1	12	27	uv|U14124.1:3387-3557	150	135	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587339 (LOC102587339), transcript variant X1, mRNA	1.409774436
SdnRY1_28107	1	1	18	33	uv|KF719005.1:2205-5132	2417	2402	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum octanoyltransferase-like (LOC102599786), transcript variant X2, mRNA	1.409774436
CLCdnRY9_68628	1	1	7	23	uv|LC121520.1:2705-3093	336	320	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum putative F-box protein At1g49610 (LOC102603985), transcript variant X9, mRNA	1.505174036
PBdnRY1_10257	1	1	1038	1053	uv|KC702205.1:1-1107	788	773	Weak	Weak	Suspect[1054,1062];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum 26S proteasome non-ATPase regulatory subunit 8 homolog A (LOC102603250), mRNA	1.412429379
SdnRY1_28185	1	1	4	19	uv|J02482.1:1-5386-49	1754	1739	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum uncharacterized LOC102595274 (LOC102595274), mRNA	1.413760603
SdnRY1_28190	1	1	1023	1038	uv|KC702236.1:1-1024	876	891	Weak	Weak	Suspect[1039,1061];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum LRR receptor-like serine/threonine-protein kinase EFR (LOC107058948), mRNA	1.413760603
CLCdnRY8_19341	1	1	13	28	uv|KY031735.1:1-4680	3203	3188	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum RNA-binding protein NOB1-like (LOC102598034), mRNA	1.416430595
CLCdnRY1_22888	1	1	1032	1048	uv|AF310136.1:497-2034	1103	1087	Weak	Weak	Suspect[1049,1057];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583449 (LOC102583449), mRNA	1.51371807
CLCdnRY10_74303	1	1	23	38	uv|L08862.1:2848-3728-49	355	340	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1279	1		1.419110691
CLCdnRY12_65394	1	1	1021	1036	uv|JF909482.1:3850-8059	3123	3138	Weak	Weak	Suspect[1037,1057];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593065 (LOC102593065), mRNA	1.419110691
SdnRY1_28342	1	1	1021	1037	uv|NGB00051.1:1428-2848	1314	1298	Weak	Weak	Suspect[1038,1056];	NO_DATA	1	1	PREDICTED: Solanum tuberosum leucine-rich repeat extensin-like protein 3 (LOC102598102), mRNA	1.515151515
SdnRY1_28342	1	1	1016	1031	uv|NGB00051.1:1428-2848	1313	1298	None	Weak	Suspect[1038,1056];	NO_DATA	1	1	PREDICTED: Solanum tuberosum leucine-rich repeat extensin-like protein 3 (LOC102598102), mRNA	1.420454545
SdnRY1_28353	1	1	5	20	uv|JX310867.1:868-3760	1637	1622	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	1224	1	PREDICTED: Solanum tuberosum protein phosphatase 2C 37-like (LOC102599348), mRNA	1.420454545
CLCdnRY12_5908	1	1	1039	1054	uv|KC702192.1:1-523	64	49	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum repressor of RNA polymerase III transcription MAF1 homolog (LOC102601791), transcript variant X1, mRNA	1.423149905
PBdnRY1_12825	1	1	1027	1042	uv|KF718979.1:2206-6730	4300	4285	Weak	Weak	Suspect[1043,1054];	TRUE_BIOLOGICAL	3701	1	Solanum tuberosum dehydroascorbate reductase (DHAR2), mRNA<>Solanum tuberosum dehydroascorbate reductase mRNA, complete cds	1.423149905
CLCdnRY10_32029	1	1	13	28	uv|L05669.1:1-1770	1408	1393	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum protein MIZU-KUSSEI 1 (LOC102598361), mRNA	1.424501425
CLCdnRY10_54374	1	1	1033	1048	uv|X13003.1:2753-4028	1219	1204	Weak	Weak	Suspect[1049,1053];	TRUE_BIOLOGICAL	561	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-3 (LOC102590906), transcript variant X2, mRNA	1.424501425
CLCdnRY4_53509	1	1	1033	1048	uv|X13003.1:2753-4028	1219	1204	Weak	Weak	Suspect[1049,1053];	TRUE_BIOLOGICAL	561	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-3 (LOC102590906), transcript variant X2, mRNA	1.424501425
VdnRY6_8292	1	1	1030	1045	uv|KF718996.1:2914-4532	349	364	Weak	Weak	Suspect[1046,1053];	NO_DATA	1	1	PREDICTED: Solanum tuberosum acylamino-acid-releasing enzyme-like (LOC102587454), transcript variant X4, mRNA	1.424501425
CLCdnRY11_18261	1	1	15	30	uv|KF853602.1:1019-2932	1465	1480	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum wall-associated receptor kinase-like 15 (LOC102589255), mRNA	1.425855513
SdnRY1_28497	1	1	5	20	uv|KF680545.1:1-2837	1349	1364	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107059976 (LOC107059976), mRNA	1.428571429
CLCdnRY10_11210	1	1	1027	1048	uv|U55760.1:1-2749	2333	2312	Weak	Weak	None	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase RING1-like (LOC102605063), mRNA	2.003816794
CLCdnRY3_13171	1	1	1015	1031	uv|NGB00917.1:1-45	18	34	Weak	Weak	Suspect[1032,1048];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chaperone protein dnaJ 50 (LOC102583196), mRNA	1.526717557
CLCdnRY1_3337	1	1	6	22	uv|M16217.1:1-2529	198	182	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum gamma carbonic anhydrase 1, mitochondrial-like (LOC102586209), transcript variant X3, misc_RNA	1.53698367
VdnRY4_4500	1	1	716	768	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	Solanum tuberosum ribulose bisphosphate carboxylase small chain C, chloroplastic-like (RBCS-C), mRNA<>Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds	5
SdnRY1_28792	1	1	6	976	uv|U37573.1:2706-4083	1301	331	Strong	Strong	Suspect[1,5];	TRUE_BIOLOGICAL	9443	1	Reporter vector pBNP1, complete sequence	93.44894027
SdnRY1_28792	1	1	777	989	uv|JX310866.1:2211-2467	1	217	Strong	Strong	Suspect[1,5];	NO_DATA	1	1	Reporter vector pBNP1, complete sequence	20.4238921
SdnRY1_28792	1	1	983	1038	uv|JN874481.1:57-2095	1903	1958	Strong	Strong	Suspect[1,5];	TRUE_BIOLOGICAL	86599	1	Reporter vector pBNP1, complete sequence	5.298651252
CLCdnRY1_15572	1	1	997	1013	uv|J02400.1:1-5243-49	5005	5021	Weak	Weak	Suspect[1014,1036];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum calmodulin-binding protein 60 B-like (LOC102591443), mRNA	1.544401544
CLCdnRY8_16429	1	1	997	1013	uv|J02400.1:1-5243-49	5005	5021	Weak	Weak	Suspect[1014,1036];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum calmodulin-binding protein 60 B-like (LOC102591443), mRNA	1.544401544
CLCdnRY1_60511	1	1	23	38	uv|AF379854.1:4263-5841	1028	1043	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	5820	1	Solanum pennellii chromosome ch07, complete genome	1.450676983
SdnRY1_28870	1	1	23	38	uv|J02400.1:1-5243-49	4970	4985	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum ras-related protein RABA5b-like (LOC102600528), mRNA	1.450676983
CLCdnRY4_27076	1	1	1014	1030	uv|M16217.1:1-2529	2040	2056	Weak	Weak	Suspect[1031,1031];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum ATP-citrate synthase beta chain protein 2 (LOC102584948), mRNA	1.551891368
CLCdnRY11_25199	1	1	1005	1021	uv|U55760.1:1-2749	558	542	Weak	Weak	Suspect[1022,1030];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102582518 (LOC102582518), mRNA	1.553398058
CLCdnRY3_56417	1	1	25	40	uv|JQ394799.1:3806-3854-49	37	22	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative lipase ROG1 (LOC102600845), mRNA	1.457725948
SdnRY1_29055	1	1	1000	1015	uv|KC702174.1:1-273	188	173	Weak	Weak	Suspect[1016,1027];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum rhodanese-like domain-containing protein 10 (LOC102583412), mRNA	1.460564752
CLCdnRY10_63514	1	1	1011	1026	uv|Z50120.1:1215-5191	215	230	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum alpha-farnesene synthase-like (LOC102600343), misc_RNA	1.461988304
CLCdnRY11_69074	1	1	1011	1026	uv|Z50120.1:1215-5191	215	230	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum alpha-farnesene synthase-like (LOC102600343), misc_RNA	1.461988304
CLCdnRY12_74585	1	1	1011	1026	uv|Z50120.1:1215-5191	215	230	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum alpha-farnesene synthase-like (LOC102600343), misc_RNA	1.461988304
CLCdnRY8_29921	1	1	22	37	uv|NGB00355.1:6454-6631	60	45	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein DETOXIFICATION 29-like (LOC102583444), transcript variant X2, mRNA	1.461988304
SdnRY1_29102	1	1	1	16	uv|Z50120.1:1215-5191	230	215	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum alpha-farnesene synthase-like (LOC102600343), misc_RNA	1.461988304
SdnRY1_29133	1	1	986	1001	uv|U13189.1:9688-10585	755	770	Weak	Weak	Suspect[1002,1025];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	1.463414634
CLCdnRY1_26567	1	1	5	20	uv|M36415.1:542-712	152	167	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum F-box protein FBW2-like (LOC102593658), transcript variant X1, mRNA	1.46627566
CLCdnRY10_27492	1	1	24	39	uv|L08924.1:1272-1370	85	70	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum rho GDP-dissociation inhibitor 1-like (LOC102585476), mRNA	1.46627566
CLCdnRY10_58414	1	1	995	1010	uv|M28248.1:2832-3628	156	171	Weak	Weak	Suspect[1011,1022];	TRUE_BIOLOGICAL	10066	1	PREDICTED: Solanum tuberosum agamous-like MADS-box protein AGL104 (LOC102581253), transcript variant X7, mRNA	1.467710372
SdnRY1_29252	1	1	993	1008	uv|NGB00051.1:1428-2848	302	317	Weak	Weak	Suspect[1009,1021];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum homeobox-leucine zipper protein GLABRA 2 (LOC102591633), mRNA	1.469147894
CLCdnRY10_46702	1	1	1	16	uv|EU496100.1:270-2269	1176	1191	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102605860 (LOC102605860), mRNA	1.473477407
SdnRY1_29353	1	1	22	43	uv|EU496100.1:270-2269	1189	1168	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative calcium-transporting ATPase 11, plasma membrane-type (LOC102591943), mRNA	2.066929134
CLCdnRY10_4103	1	1	979	995	uv|GU593055.1:13024-13902-49	700	716	Weak	Weak	Suspect[996,1016];	TRUE_BIOLOGICAL	2132	1	PREDICTED: Solanum tuberosum glyoxylate/succinic semialdehyde reductase 1 (LOC102599245), mRNA	1.57480315
CLCdnRY4_14693	1	1	979	994	uv|JN381160.1:2018-4126	1514	1529	Weak	Weak	Suspect[995,1016];	NO_DATA	1	1	PREDICTED: Solanum tuberosum PHD finger protein ALFIN-LIKE 4-like (LOC102578725), mRNA	1.476377953
CLCdnRY4_30020	1	1	979	994	uv|U89671.1:1-253	89	74	Weak	Weak	Suspect[995,1016];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102594232 (LOC102594232), ncRNA	1.476377953
CLCdnRY3_23064	1	1	1	17	uv|AF129072.1:907-3477	1149	1165	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum cell wall protein DAN4-like (LOC102584105), mRNA	1.57635468
PBdnRY1_2767	1	1	19	34	uv|KF680545.1:1-2837	2185	2170	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	PREDICTED: Solanum pennellii lysine-rich arabinogalactan protein 18 (LOC107011501), mRNA	1.477832512
CLCdnRY9_7995	1	1	978	993	uv|AY753578.1:1-838	195	210	Weak	Weak	Suspect[994,1013];	TRUE_BIOLOGICAL	6181	1	PREDICTED: Solanum pennellii uncharacterized LOC107008860 (LOC107008860), transcript variant X2, mRNA	1.480750247
SdnRY1_29487	1	1	979	996	uv|KC702188.1:1-274	138	155	Weak	Weak	Suspect[997,1010];	TRUE_BIOLOGICAL	196118	1	Lycopersicon esculentum ascorbate free radical reductase (AFRR), complete cds	1.683168317
CLCdnRY11_55699	1	1	22	37	uv|JN581377.1:1749-2242	255	240	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 12	1.485148515
CLCdnRY9_30230	1	1	3	18	uv|KF719005.1:2205-5132	1560	1575	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3701	1		1.485148515
CLCdnRY5_56079	1	1	22	37	uv|JN581377.1:1749-2242	255	240	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 12	1.486620416
SdnRY1_29578	1	1	3	18	uv|AY619006.1:1993-2089	43	58	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102603100 (LOC102603100), mRNA	1.488095238
CLCdnRY12_69484	1	1	15	30	uv|U75992.1:4807-5386	73	88	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cyclin-A1-4 (LOC102582879), transcript variant X1, mRNA	1.494023904
CLCdnRY9_30231	1	1	3	18	uv|KF719005.1:2205-5132	1560	1575	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3701	1		1.49551346
CLCdnRY9_42242	1	1	967	983	uv|U55760.1:1-2749	856	840	Weak	Weak	Suspect[984,1002];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable receptor-like protein kinase At1g67000 (LOC102605277), mRNA	1.596806387
CLCdnRY12_29793	1	1	981	996	uv|AF379854.1:4263-5841	1155	1170	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum WW domain-binding protein 4 (LOC102604502), mRNA	1.5
CLCdnRY12_29793	1	1	985	1000	uv|JN581377.1:1749-2242	259	244	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum WW domain-binding protein 4 (LOC102604502), mRNA	1.5
VdnRY7_19501	1	1	970	985	uv|U13843.1:1887-9923	1159	1144	Weak	Weak	Suspect[986,999];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum magnesium-chelatase subunit ChlH, chloroplastic (LOC102605088), mRNA	1.501501502
CLCdnRY4_26105	1	1	1	16	uv|D13792.1:699-858	90	75	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1B-23 (LOC102605750), mRNA	1.504513541
SdnRY1_29896	1	1	977	992	uv|KF718972.1:2253-2351	82	97	Weak	Weak	Suspect[993,995];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum mediator-associated protein 2-like (LOC102581829), mRNA	1.507537688
SdnRY1_29951	1	1	957	972	uv|FM991889.1:1217-1352	18	33	Weak	Weak	Suspect[973,993];	TRUE_BIOLOGICAL	10860	1	PREDICTED: Solanum tuberosum 18.2 kDa class I heat shock protein-like (LOC102606179), mRNA	1.510574018
PBdnRY1_9914	1	1	966	981	uv|JN581374.1:3097-3496	136	121	Weak	Weak	Suspect[982,992];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum ylmG homolog protein 2, chloroplastic (LOC102598192), mRNA	1.512096774
CLCdnRY7_10923	1	1	9	24	uv|J02459.1:1-48502-49	25678	25663	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586135 (LOC102586135), mRNA	1.512096774
CLCdnRY1_23859	1	1	11	27	uv|KM407512.1:886-4985	1716	1700	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 7	1.614530777
VdnRY5_21306	1	1	6	22	uv|U13860.1:6124-7626-49	593	577	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	140052	1	Solanum pennellii chromosome ch06, complete genome	1.616161616
VdnRY4_4505	1	1	558	610	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	5.268490375
CLCdnRY10_76006	1	1	4	19	uv|EU186086.1:9349-10480-30	326	341	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative acyl-activating enzyme 19 (LOC102597659), transcript variant X11, mRNA	1.52284264
CLCdnRY11_23506	1	1	9	25	uv|KF718990.1:2209-4765	1232	1248	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum tuberosum uncharacterized protein At1g51745-like (LOC102596664), mRNA	1.62601626
CLCdnRY9_63658	1	1	5	21	uv|U29899.1:1847-4463	1968	1952	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum long chain acyl-CoA synthetase 6, peroxisomal-like (LOC102599103), mRNA	1.627670397
SdnRY1_30268	1	1	953	968	uv|FJ750577.1:368-2560	1894	1879	Weak	Weak	Suspect[969,981];	TRUE_BIOLOGICAL	4447	1	PREDICTED: Solanum tuberosum uncharacterized LOC102591423 (LOC102591423), mRNA	1.529051988
CLCdnRY11_65349	1	1	11	26	uv|U42373.1:2529-2868	138	123	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase D6PKL2 (LOC102598878), mRNA	1.529051988
CLCdnRY6_5580	1	1	18	33	uv|GU593054.1:6136-8806	1511	1526	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 1.2-like (LOC102579133), mRNA	1.532175689
CLCdnRY9_9123	1	1	16	31	uv|KF718978.1:2204-3575	1137	1122	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum probable polygalacturonase (LOC102592519), transcript variant X1, mRNA	1.532175689
PBdnRY1_1044	1	1	947	963	uv|J02459.1:1-48502-49	25544	25560	Weak	Weak	Suspect[964,974];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein CP24 10B, chloroplastic (LOC102586172), mRNA	1.642710472
SdnRY1_30453	1	1	24	40	uv|U89960.1:4738-7717	2251	2267	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum clathrin light chain 2-like (LOC102585812), mRNA	1.642710472
CLCdnRY1_28244	1	1	11	26	uv|U59231.1:5103-7490	2263	2278	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	5658	1	PREDICTED: Solanum tuberosum cysteine-rich receptor-like protein kinase 2 (LOC102592909), mRNA	1.543209877
CLCdnRY1_14742	1	1	933	948	uv|M16217.1:1-2529	1613	1598	Weak	Weak	Suspect[961,970];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum DCN1-like protein 2 (LOC102582781), mRNA	1.546391753
CLCdnRY1_14742	1	1	945	960	uv|DQ883658.3:1-743	70	55	Weak	Weak	Suspect[961,970];	NO_DATA	1	1	PREDICTED: Solanum tuberosum DCN1-like protein 2 (LOC102582781), mRNA	1.546391753
PBdnRY1_3089	1	1	929	944	uv|M77169.1:820-5161	1143	1128	Weak	Weak	Suspect[945,966];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum cold-regulated 413 plasma membrane protein 2-like (LOC102596410), mRNA	1.552795031
SdnRY1_30712	1	1	927	943	uv|KF719005.1:2205-5132	1570	1554	Weak	Weak	Suspect[944,965];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum protein BIG GRAIN 1-like A (LOC102599331), transcript variant X2, mRNA	1.658031088
CLCdnRY7_33279	1	1	926	941	uv|JF909482.1:3850-8059	2400	2415	Weak	Weak	Suspect[942,963];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum probable sugar phosphate/phosphate translocator At5g04160 (LOC102592269), mRNA	1.557632399
CLCdnRY8_769	1	1	926	941	uv|KC702172.1:1-1026	672	657	Weak	Weak	Suspect[942,963];	TRUE_BIOLOGICAL	1386	1	Solanum chacoense triose phosphate isomerase cytosolic isoform mRNA, complete cds	1.557632399
CLCdnRY8_32996	1	1	926	941	uv|JF909482.1:3850-8059	2400	2415	Weak	Weak	Suspect[942,963];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum probable sugar phosphate/phosphate translocator At5g04160 (LOC102592269), mRNA	1.557632399
CLCdnRY9_8509	1	1	19	34	uv|X70484.1:595-724	60	75	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum apoptosis-inducing factor homolog B-like (LOC102580841), mRNA	1.559251559
SdnRY1_30774	1	1	926	941	uv|KP126802.1:8623-13621-38	4046	4031	Weak	Weak	Suspect[942,962];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum uncharacterized membrane protein At1g16860-like (LOC102581613), transcript variant X4, mRNA	1.559251559
CLCdnRY10_64281	1	1	3	19	uv|U47294.2:1-1774	1175	1191	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	10508	1	PREDICTED: Solanum tuberosum CDT1-like protein a, chloroplastic (LOC102581989), mRNA	1.664932362
SdnRY1_30800	1	1	935	951	uv|V00604.2:1-6407-49	1592	1576	Weak	Weak	Suspect[952,961];	TRUE_BIOLOGICAL	10861	1	Solanum tuberosum acireductone dioxygenase (ARD), mRNA<>Solanum tuberosum acireductone dioxygenase (ARD) mRNA, complete cds	1.664932362
CLCdnRY8_3702	1	1	942	957	uv|AY093584.1:3788-6062	247	232	Weak	Weak	Suspect[958,961];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum tuberosum anamorsin homolog (LOC102592402), transcript variant X2, mRNA	1.560874089
CLCdnRY9_36043	1	1	942	958	uv|M34298.1:3143-4604	602	618	Weak	Weak	Suspect[959,960];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578217 (LOC102578217), mRNA	1.666666667
CLCdnRY10_5352	1	1	936	951	uv|JN874480.1:11708-20103	4791	4806	Weak	Weak	Suspect[952,959];	TRUE_BIOLOGICAL	357	1	PREDICTED: Solanum tuberosum uncharacterized LOC107058496 (LOC107058496), mRNA	1.564129301
SdnRY1_30881	1	1	942	957	uv|KC702164.1:1-1061	125	140	Weak	Weak	Suspect[958,959];	NO_DATA	1	1	Solanum pennellii chromosome ch05, complete genome	1.564129301
CLCdnRY1_3668	1	1	942	957	uv|AY093584.1:3788-6062	247	232	Weak	Weak	Suspect[958,959];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum tuberosum anamorsin homolog (LOC102592402), transcript variant X2, mRNA	1.564129301
SdnRY1_30951	1	1	930	946	uv|V00604.2:1-6407-49	1592	1576	Weak	Weak	Suspect[947,956];	TRUE_BIOLOGICAL	10861	1	Solanum tuberosum acireductone dioxygenase (ARD), mRNA<>Solanum tuberosum acireductone dioxygenase (ARD) mRNA, complete cds	1.673640167
CLCdnRY8_36643	1	1	4	19	uv|KM407505.1:939-2365	601	616	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum peroxisome biogenesis protein 3-2-like (LOC102578667), mRNA	1.569037657
SdnRY1_31053	1	1	1	17	uv|AF028837.1:233-521	150	166	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum tetra-peptide repeat homeobox protein 1-like (LOC107062827), transcript variant X2, mRNA	1.680672269
CLCdnRY10_4645	1	1	924	939	uv|D29830.1:1304-1411	89	74	Weak	Weak	Suspect[940,952];	NO_DATA	1	1	Solanum tuberosum mitochondrial import receptor subunit TOM20-like (TOM20), mRNA<>S.tuberosum mRNA for TOM20 protein	1.575630252
CLCdnRY8_4829	1	1	920	935	uv|L11060.1:23-714	345	330	Weak	Weak	Suspect[936,952];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum superoxide dismutase [Fe], chloroplastic (LOC102577566), transcript variant X1, mRNA	1.575630252
CLCdnRY11_22676	1	1	10	25	uv|JQ394804.1:1-1051	410	395	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum deSI-like protein At4g17486 (LOC102582965), mRNA	1.575630252
SdnRY1_31141	1	1	914	929	uv|J02459.1:1-48502-49	28360	28375	Weak	Weak	Suspect[930,949];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum lignin-forming anionic peroxidase-like (LOC102599828), mRNA	1.58061117
CLCdnRY1_8686	1	1	23	39	uv|J02459.1:1-48502-49	1258	1242	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum vacuolar protein sorting-associated protein 32 homolog 2-like (LOC102581914), mRNA	1.687763713
SdnRY1_31205	1	1	24	39	uv|NGB00984.1:721-816	42	27	Weak	Weak	Suspect[1,23];	NO_DATA	1	1		1.583949314
SdnRY1_31222	1	1	908	923	uv|AF379854.1:4263-5841	452	467	Weak	Weak	Suspect[924,946];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum cytochrome P450 76A2-like (LOC102595697), mRNA	1.585623679
SdnRY1_31279	1	1	926	942	uv|U02436.1:3152-4436	666	682	Weak	Weak	Suspect[943,945];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580363 (LOC102580363), mRNA	1.693121693
VdnRY5_3830	1	1	22	37	uv|AF379854.1:3-2710	2596	2581	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum alpha/beta hydrolase domain-containing protein 17B-like (LOC102598142), mRNA	1.587301587
VdnRY3_75339	1	1	929	944	uv|DQ391279.1:1-10285	8046	8031	Weak	Weak	Suspect[945,945];	NO_DATA	1	1	PREDICTED: Solanum tuberosum BOI-related E3 ubiquitin-protein ligase 1-like (LOC102602558), mRNA	1.587301587
CLCdnRY12_14116	1	1	25	41	uv|M28248.1:2832-3628	228	212	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	10066	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 89A2-like (LOC102599059), mRNA	1.6985138
CLCdnRY12_53754	1	1	6	22	uv|KY031733.1:1-4952	2886	2870	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum TMV resistance protein N-like (LOC102594024), mRNA	1.6985138
CLCdnRY4_26616	1	1	24	39	uv|L08924.1:1272-1370	85	70	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum rho GDP-dissociation inhibitor 1-like (LOC102585476), mRNA	1.594048884
CLCdnRY11_6804	1	1	901	916	uv|AF379854.1:4263-5841	95	80	Weak	Weak	Suspect[917,940];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum probable pyridoxal 5'-phosphate synthase subunit PDX2 (LOC102605133), mRNA	1.595744681
SdnRY1_31400	1	1	1	16	uv|Z46234.1:1-402	192	177	Weak	Weak	None	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum rapid alkalinization factor-like (LOC102582329), mRNA	1.595744681
SdnRY1_31446	1	1	7	23	uv|M64753.1:1943-3400	1276	1292	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	590	1	Solanum demissum isolate 195A19 disease resistance protein R3a-like protein pseudogene, partial sequence	1.703940362
SdnRY1_31464	1	1	906	921	uv|AF379854.1:4263-5841	905	920	Weak	Weak	Suspect[922,939];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum O-acyltransferase WSD1-like (LOC102580972), mRNA	1.597444089
CLCdnRY10_19349	1	1	15	30	uv|M77169.1:820-5161	2426	2411	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum PRA1 family protein A1-like (LOC102588512), mRNA	1.599147122
CLCdnRY2_114	1	1	906	921	uv|KF718979.1:2206-6730	1293	1278	Weak	Weak	Suspect[922,938];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum LOB domain-containing protein 37-like (LOC102590299), mRNA	1.599147122
VdnRY4_4504	1	1	611	651	uv|KF719004.1:2204-2946	73	113	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	Solanum tuberosum ribulose bisphosphate carboxylase small chain C, chloroplastic-like (RBCS-C), mRNA<>Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds	4.268943436
CLCdnRY10_4765	1	1	7	22	uv|X70481.1:3564-4492	259	274	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum wound-induced protein 1 (LOC102582014), mRNA	1.600853789
CLCdnRY3_39166	1	1	23	38	uv|M16217.1:3121-3879-49	334	349	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum pennellii ABC transporter G family member 11-like (LOC107020687), mRNA	1.600853789
CLCdnRY10_59852	1	1	907	922	uv|M77169.1:820-5161	2197	2182	Weak	Weak	Suspect[923,935];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592667 (LOC102592667), transcript variant X14, misc_RNA	1.604278075
VdnRY1_43859	1	1	16	31	uv|U59231.1:8434-10310-48	1160	1145	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	5658	1	Solanum stoloniferum isolate SS16 chloroplast, complete genome	1.605995717
CLCdnRY6_13774	1	1	16	32	uv|M28248.1:2832-3628	228	212	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	10066	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 89A2-like (LOC102599059), mRNA	1.714898178
CLCdnRY4_28092	1	1	900	915	uv|KY031737.1:1-5023	1304	1289	Weak	Weak	Suspect[916,933];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum disease resistance protein RPH8A-like (LOC107059220), mRNA	1.607717042
CLCdnRY2_1939	1	1	908	923	uv|DQ883664.3:1-844	34	19	Weak	Weak	Suspect[924,931];	NO_DATA	1	1	PREDICTED: Solanum tuberosum B-box zinc finger protein 24-like (LOC102601030), transcript variant X1, mRNA	1.611170784
CLCdnRY3_22043	1	1	10	25	uv|AF041247.1:4293-4739	214	229	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	Solanum tuberosum NtPRp27-like protein mRNA, complete cds	1.614639397
PBdnRY1_10522	1	1	3	18	uv|EU048863.1:3563-3658	81	96	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	PREDICTED: Solanum tuberosum polyadenylate-binding protein-interacting protein 6 (LOC102581122), mRNA	1.61637931
CLCdnRY7_1140	1	1	906	921	uv|U02447.1:1-1009	722	707	Weak	Weak	Suspect[922,928];	TRUE_BIOLOGICAL	186765	1	PREDICTED: Solanum tuberosum quinone oxidoreductase PIG3-like (LOC102583953), mRNA	1.61637931
CLCdnRY1_5277	1	1	900	918	uv|KF718979.1:2206-6730	3096	3078	Moderate	Moderate	Suspect[919,925];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum transcription factor TCP11 (LOC102599511), mRNA	1.945945946
SdnRY1_31854	1	1	14	29	uv|KF811456.1:1402-1489	8	23	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	Solanum pennellii chromosome ch03, complete genome	1.621621622
CLCdnRY7_48288	1	1	1	16	uv|Z50120.1:1215-5191	230	215	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum alpha-farnesene synthase-like (LOC102600343), misc_RNA	1.625135428
CLCdnRY8_25020	1	1	14	29	uv|M35007.1:1-864	578	593	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum importin-5-like (LOC102600508), mRNA	1.625135428
CLCdnRY5_744	1	1	16	32	uv|JN900237.1:1151-3072-49	1694	1710	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum enolase-like (LOC102595943), transcript variant X1, mRNA	1.735357918
CLCdnRY12_40010	1	1	16	37	uv|AF379854.1:3-2710	1663	1684	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum LOB domain-containing protein 38-like (LOC101261022), mRNA	2.280130293
CLCdnRY3_35488	1	1	901	917	uv|KC702230.1:1-1019	164	180	Weak	Weak	Suspect[918,920];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum dynamin-related protein 1C (LOC102593220), mRNA	1.739130435
CLCdnRY11_16035	1	1	899	914	uv|JX560397.1:83-5970	3271	3256	Weak	Weak	Suspect[915,920];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum probable disease resistance protein At5g66900 (LOC102593177), transcript variant X2, mRNA	1.630434783
VdnRY5_1575	1	1	881	897	uv|Z46234.1:7923-9273	801	817	Weak	Weak	Suspect[898,916];	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (LOC102596435), mRNA	1.746724891
SdnRY1_32081	1	1	887	902	uv|JN874481.1:57-2095	1105	1090	Weak	Weak	Suspect[903,916];	TRUE_BIOLOGICAL	3705	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062405 (LOC107062405), transcript variant X1, ncRNA	1.637554585
CLCdnRY10_21946	1	1	4	19	uv|KC614689.1:1-590	459	444	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum serine carboxypeptidase-like 11 (LOC102593169), mRNA	1.639344262
CLCdnRY10_21946	1	1	14	29	uv|KM407509.1:3217-4703	807	822	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	40674	1	PREDICTED: Solanum tuberosum serine carboxypeptidase-like 11 (LOC102593169), mRNA	1.639344262
CLCdnRY11_47488	1	1	883	898	uv|KF719002.1:2205-2598	292	307	Weak	Weak	Suspect[899,915];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum disease resistance protein TAO1-like (LOC102604447), transcript variant X1, mRNA	1.639344262
SdnRY1_32198	1	1	885	901	uv|L08860.1:1134-1231	57	41	Weak	Weak	Suspect[902,912];	NO_DATA	1	1	PREDICTED: Solanum tuberosum non-specific lipid-transfer protein-like protein At5g64080 (LOC102594678), transcript variant X1, mRNA	1.754385965
CLCdnRY4_37381	1	1	20	35	uv|EF437940.1:3516-6082	1792	1807	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable 2-oxoglutarate-dependent dioxygenase AOP1.2 (LOC102589018), mRNA	1.644736842
PBdnRY1_5747	1	1	872	893	uv|AF379854.1:3-2710	1684	1663	Weak	Weak	Suspect[894,911];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum LOB domain-containing protein 38-like (LOC101261022), mRNA	2.305159166
CLCdnRY2_37425	1	1	16	31	uv|U67875.1:6835-8216	647	662	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	4895	1	Solanum pennellii chromosome ch09, complete genome	1.646542261
CLCdnRY11_947	1	1	23	39	uv|AF327712.1:16794-18581	919	903	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (LOC102587206), mRNA	1.758241758
CLCdnRY5_918	1	1	23	39	uv|AF327712.1:16794-18581	919	903	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (LOC102587206), mRNA	1.758241758
PBdnRY1_12130	1	1	21	36	uv|J02400.1:1-5243-49	2964	2979	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585649 (LOC102585649), mRNA	1.650165017
CLCdnRY10_625	1	1	877	892	uv|KC702167.1:1-1135	696	681	Weak	Weak	Suspect[893,909];	TRUE_BIOLOGICAL	1386	1	Solanum tuberosum glyceraldehyde 3-phosphate dehydrogenase mRNA, complete cds	1.650165017
CLCdnRY4_717	1	1	877	892	uv|KC702167.1:1-1135	696	681	Weak	Weak	Suspect[893,909];	TRUE_BIOLOGICAL	1386	1	Solanum tuberosum glyceraldehyde 3-phosphate dehydrogenase mRNA, complete cds	1.650165017
SdnRY1_32321	1	1	881	896	uv|U09128.1:1-1663	634	619	Weak	Weak	Suspect[897,909];	TRUE_BIOLOGICAL	1386	1	Solanum pennellii chromosome ch08, complete genome	1.650165017
CLCdnRY10_27868	1	1	890	907	uv|JF909481.1:3855-5640	1103	1086	Weak	Weak	Suspect[908,908];	NO_DATA	1	1	Solanum pennellii chromosome ch06, complete genome	1.872246696
CLCdnRY8_6647	1	1	14	29	uv|JN874481.1:57-2095	1090	1105	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	3705	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062405 (LOC107062405), transcript variant X1, ncRNA	1.651982379
SdnRY1_32480	1	1	876	891	uv|U09128.1:1-1663	634	619	Weak	Weak	Suspect[892,904];	TRUE_BIOLOGICAL	1386	1	Solanum pennellii chromosome ch08, complete genome	1.659292035
CLCdnRY6_33154	1	1	881	896	uv|KC702187.1:1-1023	408	393	Weak	Weak	Suspect[897,904];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like (LOC102604439), mRNA	1.659292035
SdnRY1_32541	1	1	1	17	uv|AF028837.1:233-521	150	166	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum tetra-peptide repeat homeobox protein 1-like (LOC107062827), transcript variant X2, mRNA	1.775804661
SdnRY1_32558	1	1	14	29	uv|Z46234.1:664-3443	943	928	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	4892	1		1.66481687
CLCdnRY10_29511	1	1	875	890	uv|L08860.1:1858-2910-49	692	707	Weak	Weak	Suspect[891,899];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum LOB domain-containing protein 1-like (LOC102603810), mRNA	1.668520578
PBdnRY1_197	1	1	2	17	uv|M77169.1:820-5161	3969	3984	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum secoisolariciresinol dehydrogenase-like (LOC102601033), mRNA	1.668520578
CLCdnRY11_59123	1	1	880	897	uv|LC121520.1:4008-4664	80	63	Weak	Weak	Suspect[898,898];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum pennellii homologous-pairing protein 2 homolog (LOC107018889), transcript variant X1, mRNA	1.893095768
CLCdnRY10_12339	1	1	878	893	uv|L08862.1:1-2039	1679	1694	Weak	Weak	Suspect[894,897];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum homeobox-leucine zipper protein ATHB-13 (LOC102581280), mRNA	1.672240803
CLCdnRY3_14321	1	1	878	893	uv|L08862.1:1-2039	1679	1694	Weak	Weak	Suspect[894,895];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum homeobox-leucine zipper protein ATHB-13 (LOC102581280), mRNA	1.675977654
SdnRY1_32751	1	1	17	32	uv|M98046.1:2386-3803	782	767	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum homeobox-leucine zipper protein ATHB-7-like (LOC102585726), mRNA	1.675977654
CLCdnRY8_1101	1	1	9	25	uv|AF327712.1:16794-18581	919	903	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum tuberosum glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (LOC102587206), mRNA	1.789709172
CLCdnRY7_6630	1	1	14	29	uv|JN874481.1:57-2095	1090	1105	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	3705	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062405 (LOC107062405), transcript variant X1, ncRNA	1.679731243
CLCdnRY10_19551	1	1	863	879	uv|U30497.1:3230-4814	1584	1568	Weak	Weak	Suspect[880,892];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum pennellii formin-like protein 5 (LOC107002427), transcript variant X2, mRNA	1.793721973
SdnRY1_32840	1	1	874	889	uv|U75992.1:11880-11976	26	11	Weak	Weak	Suspect[890,892];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum protein YLS3-like (LOC102592056), mRNA	1.68161435
SdnRY1_32875	1	1	1	18	uv|M28829.1:1-8684-49	7662	7645	Weak	Weak	Suspect[19,19];	TRUE_BIOLOGICAL	620	1	Solanum tuberosum cultivar NS-8 unknown genomic sequence	1.907968575
SdnRY1_32875	1	1	20	36	uv|NGB00413.1:4732-7508	145	129	Weak	Weak	Suspect[19,19];	TRUE_BIOLOGICAL	12103	1	Solanum tuberosum cultivar NS-8 unknown genomic sequence	1.795735129
VdnRY5_29892	1	1	14	30	uv|EF456735.1:7106-7196	62	78	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum wall-associated receptor kinase 2-like (LOC102584244), mRNA	1.795735129
SdnRY1_32918	1	1	1	17	uv|AF028837.1:233-521	150	166	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum tetra-peptide repeat homeobox protein 1-like (LOC107062827), transcript variant X2, mRNA	1.799775028
CLCdnRY8_11594	1	1	857	873	uv|AF379854.1:3-2710	375	391	Weak	Weak	Suspect[874,886];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum ATP-citrate synthase alpha chain protein 2-like (LOC102585745), mRNA	1.805869074
CLCdnRY1_10583	1	1	855	871	uv|AF379854.1:3-2710	375	391	Weak	Weak	Suspect[872,884];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum ATP-citrate synthase alpha chain protein 2-like (LOC102585745), mRNA	1.809954751
CLCdnRY7_11700	1	1	855	871	uv|AF379854.1:3-2710	375	391	Weak	Weak	Suspect[872,884];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum ATP-citrate synthase alpha chain protein 2-like (LOC102585745), mRNA	1.809954751
CLCdnRY10_68344	1	1	12	27	uv|FJ931533.1:7978-12753-49	2899	2914	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	7147	1	PREDICTED: Solanum tuberosum ABC transporter B family member 11-like (LOC102595886), mRNA	1.698754247
SdnRY1_33210	1	1	13	28	uv|EU048863.1:1340-1438	29	44	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	6134	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584732 (LOC102584732), mRNA	1.70261067
CLCdnRY5_15134	1	1	858	873	uv|GU593055.1:4102-4364	229	214	Weak	Weak	Suspect[874,881];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581125 (LOC102581125), transcript variant X3, mRNA	1.70261067
SdnRY1_33250	1	1	842	859	uv|Z46234.1:664-3443	2588	2571	Weak	Weak	Suspect[860,879];	TRUE_BIOLOGICAL	4892	1	Solanum tuberosum SNF1-related protein kinase regulatory subunit beta-1-like (LOC102591352), mRNA<>Solanum tuberosum clone 097D06 GAL83-like protein mRNA, complete cds	1.934015927
CLCdnRY11_51329	1	1	861	876	uv|J02400.1:1-5243-49	3015	3000	Weak	Weak	Suspect[877,877];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum cytochrome P450 714C2-like (LOC102592482), mRNA	1.710376283
CLCdnRY1_29972	1	1	855	870	uv|DQ391279.1:13402-14600	920	935	Weak	Weak	Suspect[871,876];	NO_DATA	1	1		1.712328767
VdnRY1_39678	1	1	850	865	uv|U42373.1:2529-2868	123	138	Weak	Weak	Suspect[866,875];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase D6PKL2 (LOC102598878), mRNA	1.714285714
SdnRY1_33404	1	1	21	36	uv|AF129072.1:907-3477	1967	1952	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 50S ribosomal protein L27-like (LOC102591378), transcript variant X1, mRNA	1.714285714
VdnRY4_14681	1	1	855	870	uv|KC702194.1:1-1023	961	976	Weak	Weak	Suspect[871,875];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum UDP-N-acetylenolpyruvoylglucosamine reductase-like (LOC102604841), mRNA	1.714285714
SdnRY1_33446	1	1	855	870	uv|AY568055.1:6692-7837	548	563	Weak	Weak	Suspect[871,874];	NO_DATA	1	1	Solanum pennellii chromosome ch07, complete genome	1.71624714
CLCdnRY1_43935	1	1	1	16	uv|Z50120.1:1215-5191	230	215	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum alpha-farnesene synthase-like (LOC102600343), misc_RNA	1.718213058
SdnRY1_33480	1	1	849	864	uv|JX560397.1:83-5970	5489	5474	Weak	Weak	Suspect[865,873];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At4g38150-like (LOC102600073), mRNA	1.718213058
PBdnRY1_1375	1	1	13	28	uv|JF909482.1:3850-8059	3586	3571	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	3701	1	Solanum tuberosum calmodulin 5/6/7/8-like protein mRNA, complete cds	1.720183486
CLCdnRY2_3867	1	1	13	28	uv|AF379854.1:3-2710	799	784	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum protein DEHYDRATION-INDUCED 19 homolog 4-like (LOC102581198), mRNA	1.722158439
CLCdnRY2_20364	1	1	850	866	uv|NGB00118.1:1-154	24	40	Weak	Weak	Suspect[867,870];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cyclin-P3-1 (LOC102587169), transcript variant X2, mRNA	1.83908046
CLCdnRY6_22160	1	1	838	854	uv|L08862.1:1-2039	2011	2027	Weak	Weak	Suspect[855,868];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum probable acyl-activating enzyme 6 (LOC102599391), mRNA	1.843317972
CLCdnRY8_13126	1	1	851	867	uv|FJ710109.1:6726-9221	2086	2070	Weak	Weak	None	TRUE_BIOLOGICAL	10375	1	PREDICTED: Solanum tuberosum serine/arginine-rich splicing factor SR30 (LOC102581715), transcript variant X1, mRNA	1.84544406
CLCdnRY8_13126	1	1	848	863	uv|FJ710109.1:6726-9221	2083	2068	Weak	Weak	None	TRUE_BIOLOGICAL	10375	1	PREDICTED: Solanum tuberosum serine/arginine-rich splicing factor SR30 (LOC102581715), transcript variant X1, mRNA	1.730103806
VdnRY7_2919	1	1	843	859	uv|KC702209.1:1-2022	802	818	Weak	Weak	Suspect[860,866];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum thioredoxin-like 1-2, chloroplastic (LOC102596305), mRNA	1.847575058
CLCdnRY1_45654	1	1	8	23	uv|KF718979.1:2206-6730	1400	1415	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum lysine-specific demethylase JMJ25 (LOC102601383), mRNA	1.732101617
CLCdnRY7_8639	1	1	848	863	uv|KF718979.1:2206-6730	1189	1174	Weak	Weak	Suspect[864,866];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum (DL)-glycerol-3-phosphatase 2-like (LOC102605815), mRNA	1.732101617
CLCdnRY1_28447	1	1	15	30	uv|U09128.1:3334-10218	5351	5366	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum protein IQ-DOMAIN 14-like (LOC102601456), transcript variant X3, mRNA	1.736111111
CLCdnRY10_4388	1	1	840	856	uv|L08862.1:1-2039	1041	1025	Weak	Weak	Suspect[857,863];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum novel plant SNARE 13-like (LOC102592689), mRNA	1.853997683
SdnRY1_33803	1	1	9	25	uv|KC702182.1:1-1023	149	133	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum (3S,6E)-nerolidol synthase 1-like (LOC102592813), mRNA	1.853997683
CLCdnRY11_31371	1	1	4	19	uv|DQ058723.1:1934-1979-35	16	1	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102601709 (LOC102601709), mRNA	1.738122827
CLCdnRY2_19297	1	1	19	41	uv|KC702166.1:1-523	347	369	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum anthocyanidin 3-O-glucosyltransferase 2-like (LOC102599449), mRNA	2.555168409
CLCdnRY12_4089	1	1	840	856	uv|L08862.1:1-2039	1041	1025	Weak	Weak	Suspect[857,861];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum novel plant SNARE 13-like (LOC102592689), mRNA	1.858304297
PBdnRY1_12353	1	1	8	24	uv|AF090452.1:1905-2082	76	60	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum tuberosum polyubiquitin-like (LOC102586619), mRNA	1.858304297
CLCdnRY10_28399	1	1	23	38	uv|J02459.1:1-48502-49	30172	30157	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum steroid 5-alpha-reductase DET2 (LOC102583495), mRNA	1.742160279
SdnRY1_33891	1	1	8	23	uv|L08862.1:1-2039	1709	1694	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586844 (LOC102586844), mRNA	1.744186047
CLCdnRY1_1860	1	1	25	40	uv|EF036511.1:4679-4770	88	73	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	Solanum tuberosum AT-hook motif nuclear-localized protein 28-like (LOC102581962), mRNA<>Solanum tuberosum cultivar Superior RSI2 mRNA, complete cds	1.746216531
CLCdnRY8_2044	1	1	820	835	uv|EF036511.1:4679-4770	73	88	Weak	Weak	Suspect[836,859];	NO_DATA	1	1	Solanum tuberosum AT-hook motif nuclear-localized protein 28-like (LOC102581962), mRNA<>Solanum tuberosum cultivar Superior RSI2 mRNA, complete cds	1.746216531
CLCdnRY6_51442	1	1	25	41	uv|JN874480.1:1050-2714	269	285	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum transcription factor bHLH104-like (LOC102594250), mRNA	1.864801865
PBdnRY1_7038	1	1	838	853	uv|Z22761.1:7913-8742-49	473	458	Weak	Weak	Suspect[854,858];	TRUE_BIOLOGICAL	153135	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590485 (LOC102590485), mRNA	1.748251748
SdnRY1_34022	1	1	21	36	uv|AF129072.1:907-3477	1967	1952	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 50S ribosomal protein L27-like (LOC102591378), transcript variant X1, mRNA	1.752336449
VdnRY3_46567	1	1	832	849	uv|DQ883671.3:1-992	74	57	Weak	Weak	Suspect[850,855];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	1.988304094
VdnRY3_1461	1	1	12	27	uv|J02400.1:1-5243-49	2484	2469	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	151341	1	Solanum tuberosum acidic ribosomal protein P1a-like (LOC102577551), mRNA<>Solanum tuberosum clone 157H11 acidic ribosomal protein P1a-like mRNA, complete cds	1.754385965
VdnRY3_1463	1	1	12	27	uv|J02400.1:1-5243-49	2484	2469	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	151341	1	Solanum tuberosum acidic ribosomal protein P1a-like (LOC102577551), mRNA<>Solanum tuberosum clone 157H11 acidic ribosomal protein P1a-like mRNA, complete cds	1.754385965
CLCdnRY9_58368	1	1	333	667	uv|NGB00024.1:1275-1702	94	428	Strong	Strong	Suspect[1,1];	TRUE_BIOLOGICAL	91347	1	E.coli/Kluyveromyces lactis shuttle vector pCXJ6	39.15592028
CLCdnRY9_58368	1	1	2	313	uv|EF437940.1:3516-6082	2531	2221	Strong	Strong	Suspect[1,1];	NO_DATA	1	1	E.coli/Kluyveromyces lactis shuttle vector pCXJ6	36.45955451
CLCdnRY9_58368	1	1	619	853	uv|DQ996013.1:2087-3053	910	676	Strong	Strong	Suspect[1,1];	TRUE_BIOLOGICAL	620	1	E.coli/Kluyveromyces lactis shuttle vector pCXJ6	27.43259086
CLCdnRY9_58368	1	1	331	454	uv|M36415.1:190-390	122	1	Strong	Strong	Suspect[1,1];	TRUE_BIOLOGICAL	91347	1	E.coli/Kluyveromyces lactis shuttle vector pCXJ6	14.41969519
CLCdnRY9_58368	1	1	312	381	uv|U75323.1:1187-1308	70	1	Strong	Strong	Suspect[1,1];	TRUE_BIOLOGICAL	91347	1	E.coli/Kluyveromyces lactis shuttle vector pCXJ6	8.089097304
CLCdnRY3_3085	1	1	14	30	uv|JN874480.1:11708-20103	1507	1523	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	357	1	PREDICTED: Solanum tuberosum actin-depolymerizing factor 5 (LOC102593190), mRNA	1.875732708
CLCdnRY8_795	1	1	816	832	uv|AF327712.1:16794-18581	903	919	Weak	Weak	Suspect[833,853];	NO_DATA	1	1	PREDICTED: Solanum tuberosum glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (LOC102587206), mRNA	1.875732708
CLCdnRY10_65524	1	1	838	853	uv|AF078810.1:1718-2095	215	230	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum NEP1-interacting protein-like 1 (LOC102604950), mRNA	1.758499414
SdnRY1_34115	1	1	816	831	uv|U30497.1:3230-4814	1102	1117	Weak	Weak	Suspect[832,853];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580446 (LOC102580446), ncRNA	1.758499414
VdnRY6_44331	1	1	60	742	uv|DQ666274.1:249-3225	282	964	Strong	Strong	Suspect[1,47];	NO_DATA	1	1	Moss transformation vector pT2GX6 DNA, complete sequence	80.04694836
VdnRY6_44331	1	1	624	748	uv|U13859.1:128-364	237	113	Strong	Strong	Suspect[1,47];	NO_DATA	1	1	Moss transformation vector pT2GX6 DNA, complete sequence	14.55399061
VdnRY6_44331	1	1	653	749	uv|EU496103.1:1820-1918	99	3	Strong	Strong	Suspect[1,47];	NO_DATA	1	1	Moss transformation vector pT2GX6 DNA, complete sequence	11.26760563
VdnRY6_44331	1	1	48	108	uv|KJ541672.1:966-1026	1	61	Strong	Strong	Suspect[1,47];	NO_DATA	1	1	Moss transformation vector pT2GX6 DNA, complete sequence	7.042253521
VdnRY6_44331	1	1	702	756	uv|KF947528.1:837-1064	228	174	Strong	Strong	Suspect[1,47];	NO_DATA	1	1	Moss transformation vector pT2GX6 DNA, complete sequence	6.338028169
SdnRY1_34138	1	1	7	23	uv|V00604.2:1-6407-49	4252	4236	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum uncharacterized protein PAM68-like (LOC102602569), mRNA	1.877934272
PBdnRY1_2710	1	1	649	701	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	6.110458284
SdnRY1_34211	1	1	17	32	uv|KF719002.1:2205-2598	307	292	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 5	1.762632197
CLCdnRY11_9936	1	1	812	828	uv|KF853601.1:1021-3588	70	86	Weak	Weak	Suspect[829,850];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum polygalacturonase inhibitor-like (LOC102585477), mRNA	1.882352941
SdnRY1_34323	1	1	1	26	uv|KC702204.1:1-521	514	489	Moderate	Moderate	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum dof zinc finger protein DOF3.4-like (LOC102597980), partial mRNA	2.948113208
CLCdnRY10_108	1	1	23	38	uv|JX560397.1:83-5970	3765	3780	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum probable aquaporin TIP1-1 (LOC102591890), mRNA	1.768867925
PBdnRY1_2707	1	1	503	555	uv|KF719004.1:2204-2946	61	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	6.13931523
CLCdnRY11_62692	1	1	12	28	uv|U29899.1:4697-5948	52	36	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized protein At1g04910-like (LOC102600825), mRNA	1.889020071
CLCdnRY2_20102	1	1	823	838	uv|L07041.1:1-670	57	42	Weak	Weak	Suspect[839,847];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	1.770956316
CLCdnRY3_59644	1	1	812	827	uv|J02459.1:1-48502-49	28835	28820	Weak	Weak	Suspect[828,847];	TRUE_BIOLOGICAL	10699	1	Solanum lycopersicum cultivar I-3 chromosome 1	1.770956316
CLCdnRY1_35270	1	1	5	21	uv|U13189.1:15605-15827-49	97	113	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 6	1.893491124
CLCdnRY12_12095	1	1	826	841	uv|AF041247.1:4293-4739	367	352	Weak	Weak	Suspect[842,845];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102582508 (LOC102582508), transcript variant X1, mRNA	1.775147929
PBdnRY1_3735	1	1	813	828	uv|J02482.1:1-5386-49	1199	1214	Weak	Weak	Suspect[829,841];	TRUE_BIOLOGICAL	10842	1	Solanum tuberosum translocon-associated protein subunit beta-like (LOC102586746), mRNA<>Solanum tuberosum clone 021G11 translocon-associated protein beta family protein-like mRNA, complete cds	1.783590963
PBdnRY1_8266	1	1	3	18	uv|Z22761.1:1-5585	942	927	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	11632	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590900 (LOC102590900), mRNA	1.783590963
VdnRY1_29879	1	1	6	21	uv|DQ883663.3:1-840	41	56	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum subtilisin-like protease SBT1.7 (LOC102603030), mRNA	1.783590963
CLCdnRY7_25889	1	1	12	27	uv|M98046.1:2386-3803	1035	1020	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600910 (LOC102600910), mRNA	1.785714286
VdnRY3_15344	1	1	1	137	uv|AF078810.1:2263-2602	193	57	Strong	Strong	None	TRUE_BIOLOGICAL	10639	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	16.22911695
VdnRY3_15344	1	1	160	200	uv|EF411199.1:633-831	17	57	Strong	Strong	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	4.77326969
VdnRY3_15344	1	1	154	180	uv|NGB00987.1:615-833	49	75	Moderate	Strong	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	3.102625298
VdnRY3_15344	1	1	137	156	uv|AF092546.1:1-95	46	65	None	Strong	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	2.267303103
VdnRY3_15343	1	1	1	137	uv|AF078810.1:2263-2602	193	57	Strong	Strong	None	TRUE_BIOLOGICAL	10639	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	16.26794258
VdnRY3_15343	1	1	160	200	uv|EF411199.1:633-831	17	57	Strong	Strong	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	4.784688995
VdnRY3_15343	1	1	154	180	uv|NGB00987.1:615-833	49	75	Moderate	Strong	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	3.110047847
CLCdnRY2_38582	1	1	441	463	uv|AF327712.1:16794-18581	351	329	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584831 (LOC102584831), mRNA	2.631578947
VdnRY3_15343	1	1	137	156	uv|AF092546.1:1-95	46	65	None	Strong	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related genes transcriptional activator PTI5 (LOC102580067), mRNA	2.272727273
PBdnRY1_8014	1	1	16	33	uv|AF379854.1:3-2710	688	705	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum universal stress protein A-like protein (LOC102583766), mRNA	2.033492823
PBdnRY1_8014	1	1	7	22	uv|JN381160.1:2018-4126	1327	1312	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum universal stress protein A-like protein (LOC102583766), mRNA	1.794258373
CLCdnRY10_63435	1	1	804	820	uv|U09128.1:12430-14537	187	203	Weak	Weak	Suspect[821,835];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum nuclear transcription factor Y subunit A-10 (LOC102599915), transcript variant X2, mRNA	1.916167665
CLCdnRY4_2947	1	1	817	833	uv|M77169.1:820-5161	2616	2600	Weak	Weak	Suspect[834,834];	TRUE_BIOLOGICAL	1485	1	Solanum tuberosum basic endochitinase (LOC102590998), mRNA<>S.tuberosum mRNA for endochitinase	1.918465228
SdnRY1_34779	1	1	15	30	uv|J02459.1:1-48502-49	1259	1274	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589146 (LOC102589146), mRNA	1.798561151
CLCdnRY2_18144	1	1	11	26	uv|NGB00587.1:1-3232	742	727	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 3-ketoacyl-CoA synthase 3-like (LOC102593970), mRNA	1.800720288
SdnRY1_34789	1	1	6	21	uv|U13864.1:2748-4229-44	311	326	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum 60S ribosomal protein L36-2-like (LOC102603301), transcript variant X2, mRNA	1.800720288
CLCdnRY10_4285	1	1	16	31	uv|KC702206.1:1-523	364	349	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii abscisic acid receptor PYL8 (LOC107008374), mRNA	1.802884615
CLCdnRY1_31281	1	1	8	23	uv|X70481.1:3564-4492	552	567	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probable trehalose-phosphate phosphatase 2 (LOC102584086), mRNA	1.802884615
SdnRY1_34867	1	1	796	811	uv|X53127.1:443-904	109	124	Weak	Weak	Suspect[812,831];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580916 (LOC102580916), mRNA	1.805054152
CLCdnRY6_58007	1	1	27	44	uv|KC702228.1:1-1023	31	48	None	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	196118	1	Solanum tuberosum spliceosomal protein (U2B), mRNA<>Solanum tuberosum spliceosomal protein (U2B) mRNA, complete cds	2.048192771
CLCdnRY6_58007	1	1	16	31	uv|AY568055.1:6692-7837	574	589	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	Solanum tuberosum spliceosomal protein (U2B), mRNA<>Solanum tuberosum spliceosomal protein (U2B) mRNA, complete cds	1.807228916
CLCdnRY7_21151	1	1	7	22	uv|J02400.1:1-5243-49	4138	4153	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 11-like (LOC102604430), transcript variant X2, mRNA	1.807228916
SdnRY1_34938	1	1	806	821	uv|AF379854.1:4263-5841	1550	1535	Weak	Weak	Suspect[822,829];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604489 (LOC102604489), mRNA	1.809408926
CLCdnRY2_8261	1	1	803	818	uv|DQ493886.2:2848-2947	43	28	Weak	Weak	Suspect[819,828];	NO_DATA	1	1	PREDICTED: Solanum tuberosum vacuolar protein sorting-associated protein 20 homolog 2-like (LOC102602334), mRNA	1.811594203
CLCdnRY2_17025	1	1	807	822	uv|KC702220.1:1-771	384	369	Weak	Weak	Suspect[823,828];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum mannose-P-dolichol utilization defect 1 protein homolog 2 (LOC102583488), mRNA	1.811594203
SdnRY1_34998	1	1	16	31	uv|KC702179.1:1-1019	838	823	Weak	Weak	Suspect[1,15];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum acyl carrier protein 2, mitochondrial-like (LOC102587604), mRNA	1.813784764
CLCdnRY9_10687	1	1	789	804	uv|HM640258.1:317-2913	1181	1166	Weak	Weak	Suspect[805,827];	TRUE_BIOLOGICAL	5073	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase SGR9, amyloplastic-like (LOC102602984), mRNA	1.813784764
CLCdnRY12_45084	1	1	3	18	uv|U89960.1:4738-7717	1330	1345	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum thymidine kinase-like (LOC102605312), mRNA	1.81598063
VdnRY3_47804	1	1	798	813	uv|NGB00085.1:1749-1845	47	62	Weak	Weak	Suspect[814,826];	NO_DATA	1	1	PREDICTED: Solanum tuberosum lactosylceramide 4-alpha-galactosyltransferase-like (LOC102584175), mRNA	1.81598063
CLCdnRY3_23329	1	1	11	33	uv|KF719007.1:2203-2693	354	375	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 21.7 kDa class VI heat shock protein (LOC102604571), mRNA	2.666666667
CLCdnRY8_55058	1	1	808	825	uv|KC702185.1:1-522	146	163	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598511 (LOC102598511), ncRNA	2.060606061
CLCdnRY6_24721	1	1	18	33	uv|GU593054.1:6136-8806	1511	1526	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 1.2-like (LOC102579133), mRNA	1.82038835
PBdnRY1_4967	1	1	9	24	uv|FJ931533.1:7978-12753-49	556	541	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	7215	1	Solanum lycopersicum cultivar I-3 chromosome 12	1.82038835
SdnRY1_35213	1	1	8	27	uv|U13860.1:6124-7626-49	1176	1157	Moderate	Moderate	Suspect[1,7];	TRUE_BIOLOGICAL	140052	1	PREDICTED: Solanum tuberosum outer envelope protein 80, chloroplastic-like (LOC102591358), transcript variant X1, mRNA	2.311435523
CLCdnRY10_59275	1	1	803	818	uv|U89960.1:1471-2257	59	44	Weak	Weak	Suspect[819,822];	NO_DATA	1	1	PREDICTED: Solanum tuberosum peroxisomal membrane protein PMP22 (LOC102596776), mRNA	1.824817518
CLCdnRY11_43963	1	1	5	20	uv|U89960.1:1471-2257	44	59	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum tuberosum peroxisomal membrane protein PMP22 (LOC102596776), mRNA	1.824817518
CLCdnRY12_46612	1	1	5	20	uv|U89960.1:1471-2257	44	59	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum tuberosum peroxisomal membrane protein PMP22 (LOC102596776), mRNA	1.824817518
CLCdnRY9_38544	1	1	5	20	uv|U89960.1:1471-2257	44	59	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum tuberosum peroxisomal membrane protein PMP22 (LOC102596776), mRNA	1.824817518
CLCdnRY10_60999	1	1	3	18	uv|DQ391279.1:1-10285	6362	6377	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC102587497), mRNA	1.827040195
CLCdnRY12_16690	1	1	785	801	uv|U30497.1:3230-4814	1278	1294	Weak	Weak	Suspect[802,820];	NO_DATA	1	1	PREDICTED: Solanum tuberosum GILT-like protein F37H8.5 (LOC102597709), mRNA	1.951219512
SdnRY1_35335	1	1	794	809	uv|KM407512.1:886-4985	2874	2859	Weak	Weak	Suspect[810,819];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum dof zinc finger protein DOF1.5 (LOC102592414), mRNA	1.831501832
SdnRY1_35375	1	1	12	27	uv|X53127.1:443-904	137	152	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581176 (LOC102581176), mRNA	1.833740831
CLCdnRY9_50594	1	1	5	20	uv|KF718989.1:2199-3181	108	123	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597903 (LOC102597903), mRNA	1.833740831
CLCdnRY10_31202	1	1	788	803	uv|FJ380061.1:3772-3921	96	81	Weak	Weak	Suspect[804,817];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor 1B (LOC102591359), mRNA	1.835985312
VdnRY6_25673	1	1	799	816	uv|HQ418395.1:4218-4316	69	52	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum succinate dehydrogenase assembly factor 2, mitochondrial (LOC102604677), mRNA	2.083333333
CLCdnRY3_4982	1	1	779	794	uv|KC702178.1:1-2022	238	253	Weak	Weak	Suspect[795,816];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized protein At4g22758-like (LOC102599455), mRNA	1.838235294
SdnRY1_35427	1	1	789	804	uv|J02482.1:1-5386-49	3220	3235	Weak	Weak	Suspect[805,816];	TRUE_BIOLOGICAL	10842	1	Solanum pennellii chromosome ch05, complete genome	1.838235294
CLCdnRY11_67683	1	1	17	32	uv|KP057689.1:1-859	354	339	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	84111	1	PREDICTED: Solanum tuberosum glutamic acid-rich protein-like (LOC102598091), mRNA	1.840490798
CLCdnRY12_73130	1	1	17	32	uv|KP057689.1:1-859	354	339	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	84111	1	PREDICTED: Solanum tuberosum glutamic acid-rich protein-like (LOC102598091), mRNA	1.840490798
CLCdnRY7_138	1	1	24	40	uv|EU546816.1:3419-3615	36	20	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum S-adenosylmethionine synthase 2 (LOC102591461), mRNA	1.965601966
CLCdnRY6_33155	1	1	16	31	uv|KC702187.1:1-1023	393	408	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like (LOC102604439), mRNA	1.842751843
PBdnRY1_7025	1	1	7	23	uv|L05669.1:1-1770	171	187	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum photosynthetic NDH subunit of lumenal location 2, chloroplastic (LOC102579009), transcript variant X1, mRNA	1.97044335
CLCdnRY12_102	1	1	783	802	uv|U59231.1:5103-7490	2261	2242	Moderate	Moderate	Suspect[803,811];	TRUE_BIOLOGICAL	5658	1	PREDICTED: Solanum tuberosum non-specific lipid-transfer protein 1 (LOC102597952), mRNA	2.342786683
CLCdnRY2_39294	1	1	792	807	uv|J02459.1:1-48502-49	8964	8979	Weak	Weak	Suspect[808,810];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like (LOC102581021), mRNA	1.851851852
SdnRY1_35627	1	1	781	796	uv|KC702193.1:1-1136	698	683	Weak	Weak	Suspect[797,810];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum probable carbohydrate esterase At4g34215 (LOC102599150), transcript variant X2, mRNA	1.851851852
CLCdnRY9_48705	1	1	2	21	uv|KC702192.1:1-523	185	204	Moderate	Moderate	Suspect[1,1];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum kaempferol 3-O-beta-D-galactosyltransferase-like (LOC102580477), mRNA	2.354399009
SdnRY1_35778	1	1	1	18	uv|M28829.1:1-8684-49	7662	7645	Weak	Weak	Suspect[19,19];	TRUE_BIOLOGICAL	620	1	Solanum tuberosum cultivar NS-8 unknown genomic sequence	2.106567534
CLCdnRY9_48705	1	1	20	36	uv|JX310867.1:868-3760	2004	1988	Weak	Moderate	Suspect[1,1];	TRUE_BIOLOGICAL	1224	1	PREDICTED: Solanum tuberosum kaempferol 3-O-beta-D-galactosyltransferase-like (LOC102580477), mRNA	1.982651797
SdnRY1_35778	1	1	20	36	uv|NGB00413.1:4732-7508	145	129	Weak	Weak	Suspect[19,19];	TRUE_BIOLOGICAL	12103	1	Solanum tuberosum cultivar NS-8 unknown genomic sequence	1.982651797
CLCdnRY9_48705	1	1	22	37	uv|GU593055.1:13024-13902-49	709	724	Weak	Moderate	Suspect[1,1];	TRUE_BIOLOGICAL	2132	1	PREDICTED: Solanum tuberosum kaempferol 3-O-beta-D-galactosyltransferase-like (LOC102580477), mRNA	1.858736059
CLCdnRY11_34915	1	1	237	274	uv|KF719004.1:2204-2946	110	73	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Nicotiana tabacum ribulose bisphosphate carboxylase small chain S41, chloroplastic-like (LOC107791770), mRNA	4.59057072
CLCdnRY5_35393	1	1	236	273	uv|KF719004.1:2204-2946	110	73	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Nicotiana tabacum ribulose bisphosphate carboxylase small chain S41, chloroplastic-like (LOC107791770), mRNA	4.596273292
CLCdnRY3_47170	1	1	2	21	uv|KC702192.1:1-523	185	204	Moderate	Moderate	Suspect[1,1];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum kaempferol 3-O-beta-D-galactosyltransferase-like (LOC102580477), mRNA	2.36318408
CLCdnRY3_47170	1	1	20	36	uv|JX310867.1:868-3760	2004	1988	Weak	Moderate	Suspect[1,1];	TRUE_BIOLOGICAL	1224	1	PREDICTED: Solanum tuberosum kaempferol 3-O-beta-D-galactosyltransferase-like (LOC102580477), mRNA	1.990049751
CLCdnRY3_47170	1	1	22	37	uv|GU593055.1:13024-13902-49	709	724	Weak	Moderate	Suspect[1,1];	TRUE_BIOLOGICAL	2132	1	PREDICTED: Solanum tuberosum kaempferol 3-O-beta-D-galactosyltransferase-like (LOC102580477), mRNA	1.865671642
SdnRY1_35913	1	1	765	780	uv|KC614689.1:1-590	474	489	Weak	Weak	Suspect[781,803];	TRUE_BIOLOGICAL	4930	1	Solanum demissum chromosome 5 clone PGEC517A09, complete sequence	1.867995019
CLCdnRY9_65622	1	1	763	779	uv|EU360889.1:4417-6776-46	694	678	Weak	Weak	Suspect[780,802];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative F-box/LRR-repeat protein 23 (LOC102588374), mRNA	1.995012469
SdnRY1_35982	1	1	204	232	uv|KM407510.1:737-1318	235	263	Moderate	Moderate	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum histone H3.2-like (LOC102600117), mRNA	3.495630462
CLCdnRY8_14985	1	1	11	27	uv|FJ750577.1:368-2560	608	592	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4447	1	PREDICTED: Solanum tuberosum mediator of RNA polymerase II transcription subunit 15a (LOC102602431), transcript variant X3, mRNA	1.997503121
CLCdnRY12_8787	1	1	776	791	uv|U13843.1:1887-9923	7863	7848	Weak	Weak	Suspect[792,801];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum probable RNA-binding protein EIF1AD (LOC102583002), mRNA	1.872659176
CLCdnRY6_18698	1	1	769	784	uv|EF694056.1:1-945	255	240	Weak	Weak	Suspect[785,801];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 1.2-like (LOC102579133), mRNA	1.872659176
CLCdnRY12_21486	1	1	25	41	uv|GQ469986.1:124-219	13	29	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	Solanum tuberosum uncharacterized LOC102577703 (LOC102577703), mRNA<>Solanum tuberosum clone 050A02 unknown mRNA	2
SdnRY1_36034	1	1	25	40	uv|U13187.1:196-287	86	71	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum squamosa promoter-binding-like protein 6 (LOC102583706), mRNA	1.875
CLCdnRY7_24198	1	1	779	794	uv|L08860.1:1-1129	205	220	Weak	Weak	Suspect[795,799];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum lycopersicum lipid phosphate phosphatase epsilon 2, chloroplastic-like (LOC101265697), mRNA	1.877346683
CLCdnRY2_4545	1	1	780	798	uv|NGB00051.1:1428-2848	1308	1290	Moderate	Moderate	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum acetyl-CoA-benzylalcohol acetyltransferase-like (LOC102595175), mRNA	2.255639098
CLCdnRY9_42310	1	1	3	18	uv|AY093584.1:3788-6062	1775	1760	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum tuberosum patellin-4-like (LOC102606320), mRNA	1.879699248
CLCdnRY3_28851	1	1	13	28	uv|NGB00358.1:5319-5417	32	47	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum auxin-induced protein 22D-like (LOC102590668), mRNA	1.884422111
SdnRY1_36152	1	1	769	784	uv|KF718989.1:2199-3181	94	79	Weak	Weak	Suspect[785,796];	TRUE_BIOLOGICAL	3700	1	Solanum pennellii chromosome ch05, complete genome	1.884422111
CLCdnRY11_18031	1	1	3	20	uv|NGB00413.1:4732-7508	2753	2736	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum thioredoxin M3, chloroplastic-like (LOC102589431), transcript variant X1, mRNA	2.13836478
CLCdnRY11_53622	1	1	18	35	uv|LC121520.1:2705-3093	73	56	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum clone BAC BA66C3 sequence	2.13836478
CLCdnRY12_6131	1	1	21	37	uv|U89933.1:3859-4054	43	27	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At4g36180 (LOC102581200), mRNA	2.01511335
CLCdnRY2_11825	1	1	9	26	uv|M98046.1:2386-3803	862	845	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum guanine nucleotide-binding protein-like NSN1 (LOC102602284), mRNA	2.146464646
CLCdnRY6_11189	1	1	11	27	uv|M77169.1:820-5161	754	738	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum uncharacterized LOC102595495 (LOC102595495), mRNA	2.02020202
CLCdnRY8_8753	1	1	24	39	uv|J02400.1:1-5243-49	4138	4153	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 11-like (LOC102604430), transcript variant X2, mRNA	1.893939394
CLCdnRY2_26480	1	1	765	781	uv|U09476.1:1-864	616	600	Weak	Weak	Suspect[782,790];	TRUE_BIOLOGICAL	581	1	PREDICTED: Solanum tuberosum putative disease resistance protein RGA3 (LOC102599401), transcript variant X3, mRNA	2.025316456
CLCdnRY4_37990	1	1	8	23	uv|NGB00051.1:1428-2848	1298	1313	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum tuberosum glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial (LOC102589548), mRNA	1.901140684
SdnRY1_36417	1	1	9	24	uv|X70481.1:3564-4492	406	391	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum RNA-binding protein 26-like (LOC102591817), transcript variant X3, mRNA	1.901140684
SdnRY1_36442	1	1	16	31	uv|AY093584.1:3788-6062	988	973	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	5052	1		1.903553299
VdnRY7_7295	1	1	3	19	uv|JN381160.1:2018-4126	134	150	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	PREDICTED: Solanum tuberosum digalactosyldiacylglycerol synthase 1, chloroplastic-like (LOC102578535), mRNA	2.033036849
CLCdnRY6_37107	1	1	760	775	uv|AY962893.1:8266-9065	713	728	Weak	Weak	Suspect[776,787];	TRUE_BIOLOGICAL	29487	1	Solanum pennellii chromosome ch04, complete genome	1.905972046
SdnRY1_36463	1	1	5	20	uv|U13867.1:297-483	87	72	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum tuberosum RNA-binding protein 42-like (LOC102586882), mRNA	1.905972046
SdnRY1_36466	1	1	764	779	uv|AF379854.1:3-2710	557	542	Weak	Weak	Suspect[780,787];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588171 (LOC102588171), transcript variant X1, mRNA	1.905972046
SdnRY1_36545	1	1	2	17	uv|AF379854.1:4263-5841	340	355	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580800 (LOC102580800), transcript variant X3, ncRNA	1.910828025
VdnRY1_25335	1	1	770	785	uv|KC702212.1:1-1136	576	591	Weak	Weak	None	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum 39S ribosomal protein L45, mitochondrial (LOC102588846), mRNA	1.910828025
CLCdnRY10_83674	1	1	23	39	uv|DQ317600.1:97-231	103	119	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 11	2.040816327
CLCdnRY12_39281	1	1	23	39	uv|Z22761.1:1-5585	1453	1437	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	11632	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579188 (LOC102579188), mRNA	2.046035806
CLCdnRY5_29073	1	1	12	28	uv|U10459.1:6337-6662	217	201	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	10639	1	PREDICTED: Solanum tuberosum dehydrodolichyl diphosphate synthase 2-like (LOC102581136), transcript variant X1, mRNA	2.04865557
VdnRY3_75338	1	1	765	780	uv|DQ391279.1:1-10285	8046	8031	Weak	Weak	Suspect[781,781];	NO_DATA	1	1	PREDICTED: Solanum tuberosum BOI-related E3 ubiquitin-protein ligase 1-like (LOC102602558), mRNA	1.920614597
CLCdnRY11_85225	1	1	745	761	uv|JN581377.1:1749-2242	258	242	Weak	Weak	Suspect[764,779];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum feruloyl CoA ortho-hydroxylase 1 (LOC102584589), mRNA	2.053915276
CLCdnRY11_85225	1	1	747	763	uv|KJ541666.1:4495-4534-49	89	73	Weak	Weak	Suspect[764,779];	NO_DATA	1	1	PREDICTED: Solanum tuberosum feruloyl CoA ortho-hydroxylase 1 (LOC102584589), mRNA	2.053915276
SdnRY1_36733	1	1	753	771	uv|U47120.2:791-908	50	68	Moderate	Moderate	Suspect[772,778];	NO_DATA	1	1	Bradysia amoena 28S ribosomal RNA gene, partial sequence<>Bradysia tilicola 28S ribosomal RNA gene, partial sequence	2.313624679
SdnRY1_36755	1	1	4	19	uv|KC295444.1:2529-2625	68	53	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor 2-like (LOC102595148), mRNA	1.928020566
VdnRY2_1342	1	1	262	314	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	6.692406692
VdnRY5_15547	1	1	750	771	uv|FJ380061.1:3772-3921	57	78	Weak	Weak	Suspect[772,777];	TRUE_BIOLOGICAL	122277	1	PREDICTED: Solanum tuberosum alpha-L-fucosidase 1-like (LOC102600482), mRNA	2.702702703
PBdnRY1_2713	1	1	487	539	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	6.701030928
SdnRY1_36805	1	1	13	28	uv|KF718979.1:2206-6730	4288	4303	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum inactive protein RESTRICTED TEV MOVEMENT 1-like (LOC102595499), mRNA	1.932989691
CLCdnRY6_45474	1	1	5	20	uv|KC702209.1:1-2022	1031	1016	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable WRKY transcription factor 57 (LOC102603056), transcript variant X1, mRNA	1.935483871
CLCdnRY11_56584	1	1	735	753	uv|U55760.1:1-2749	583	565	Moderate	Moderate	Suspect[754,774];	NO_DATA	1	1	PREDICTED: Solanum tuberosum brefeldin A-inhibited guanine nucleotide-exchange protein 1 (LOC102590847), mRNA	2.325581395
SdnRY1_36920	1	1	24	40	uv|KF718989.1:2199-3181	111	127	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580027 (LOC102580027), mRNA	2.067183463
CLCdnRY8_1329	1	1	24	39	uv|KM407505.1:939-2365	1087	1072	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum ubiquitin-conjugating enzyme E2 28 (LOC102598215), mRNA	1.937984496
CLCdnRY5_57415	1	1	13	28	uv|JN874480.1:6795-9434	1514	1499	Weak	Weak	Suspect[1,12];Suspect[758,774];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101255635 (LOC101255635), transcript variant X1, mRNA	1.937984496
CLCdnRY5_57415	1	1	742	757	uv|X12895.1:1-324	215	230	Weak	Weak	Suspect[1,12];Suspect[758,774];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101255635 (LOC101255635), transcript variant X1, mRNA	1.937984496
VdnRY3_22557	1	1	401	453	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	6.727037516
PBdnRY1_8905	1	1	16	34	uv|EF456735.1:7106-7196	61	79	Moderate	Moderate	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 50S ribosomal protein L18 (LOC102598083), transcript variant X1, mRNA	2.328589909
PBdnRY1_8905	1	1	19	35	uv|Z29589.1:3211-4486	884	900	Weak	Moderate	Suspect[1,15];	TRUE_BIOLOGICAL	4527	1	PREDICTED: Solanum tuberosum 50S ribosomal protein L18 (LOC102598083), transcript variant X1, mRNA	2.069857697
PBdnRY1_14061	1	1	1	16	uv|U67875.1:6835-8216	430	415	Weak	Weak	None	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578172 (LOC102578172), mRNA	1.940491591
SdnRY1_36943	1	1	740	755	uv|KC702178.1:1-2022	191	176	Weak	Weak	Suspect[756,773];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102606048 (LOC102606048), mRNA	1.940491591
CLCdnRY10_54466	1	1	14	29	uv|JF909478.1:3849-4965	758	743	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	10639	1	Solanum lycopersicum cultivar I-3 chromosome 2	1.943005181
CLCdnRY1_12432	1	1	10	27	uv|J02459.1:1-48502-49	29354	29371	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	10699	1	Solanum lycopersicum cultivar I-3 chromosome 5	2.204928664
CLCdnRY8_2483	1	1	755	770	uv|Z46234.1:7923-9273	559	544	Weak	Weak	Suspect[771,771];	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum non-functional pseudokinase ZED1-like (LOC102598154), mRNA	1.945525292
CLCdnRY9_32349	1	1	745	760	uv|AY217101.1:3918-4201	216	231	Weak	Weak	Suspect[761,769];	NO_DATA	1	1	PREDICTED: Solanum tuberosum NAC transcription factor 25 (LOC102590664), mRNA	1.950585176
SdnRY1_37123	1	1	743	758	uv|KC702192.1:1-523	270	285	Weak	Weak	Suspect[759,768];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum classical arabinogalactan protein 5 (LOC102589511), mRNA	1.953125
SdnRY1_37156	1	1	739	754	uv|KF718979.1:2206-6730	1128	1113	Weak	Weak	Suspect[755,768];	TRUE_BIOLOGICAL	3701	1	Solanum tuberosum chromosome 7 clone RHPOTKEY169K08, complete sequence	1.953125
VdnRY2_84835	1	1	12	27	uv|M16217.1:1-2529	142	127	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum mRNA for eukaryotic initiation factor 5A2, complete cds	1.953125
CLCdnRY8_17206	1	1	744	763	uv|KF719002.1:2205-2598	72	53	Moderate	Moderate	Suspect[764,767];	NO_DATA	1	1	PREDICTED: Solanum pennellii uncharacterized LOC107023587 (LOC107023587), mRNA	2.477183833
CLCdnRY6_5197	1	1	749	764	uv|M29626.1:1-275	80	95	Weak	Weak	Suspect[765,767];	TRUE_BIOLOGICAL	561	1	PREDICTED: Nicotiana attenuata 60S ribosomal protein L19-3-like (LOC109211116), mRNA	1.955671447
SdnRY1_37233	1	1	82	251	uv|JF909467.1:4676-4959	51	220	Strong	Strong	None	NO_DATA	1	1	Potato light-inducible tissue-specific ST-LS1 gene	22.06266319
CLCdnRY3_30026	1	1	5	21	uv|M77169.1:820-5161	2192	2176	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum lycopersicum agamous-like MADS-box protein AGL62 (LOC101252236), mRNA	2.091503268
VdnRY2_1944	1	1	14	30	uv|J02482.1:1-5386-49	3527	3543	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	10842	1	Solanum tuberosum uncharacterized LOC102582373 (LOC102582373), mRNA<>Solanum tuberosum clone 104F03 unknown mRNA	2.091503268
CLCdnRY1_57375	1	1	4	764	uv|HQ245711.1:13692-16404	2621	1861	Strong	Strong	None	NO_DATA	1	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	99.47643979
CLCdnRY1_57375	1	1	1	90	uv|LC121523.1:1684-1779	91	1	Strong	Strong	None	NO_DATA	1	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	11.64921466
SdnRY1_37439	1	1	18	34	uv|AY093584.1:3788-6062	154	138	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597353 (LOC102597353), mRNA	2.099737533
CLCdnRY12_1671	1	1	15	30	uv|M98046.1:2386-3803	346	331	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum uncharacterized LOC543817 (LOC543817), mRNA	1.968503937
SdnRY1_37452	1	1	741	756	uv|U09128.1:1-1663	219	204	Weak	Weak	Suspect[757,761];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101250852 (LOC101250852), mRNA	1.97109067
CLCdnRY3_41844	1	1	24	39	uv|JF909482.1:3850-8059	3613	3598	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum mitochondrial phosphate carrier protein 1, mitochondrial-like (LOC102599564), mRNA	1.97109067
VdnRY2_1345	1	1	245	297	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	6.842105263
SdnRY1_37502	1	1	735	750	uv|U64449.2:2902-3114	17	32	Weak	Weak	Suspect[751,760];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581663 (LOC102581663), ncRNA	1.973684211
VdnRY6_18309	1	1	15	30	uv|DQ391279.1:1-10285	878	893	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum 6-hydroxynicotinate 3-monooxygenase (LOC102598835), transcript variant X1, mRNA	1.973684211
CLCdnRY10_66657	1	1	742	758	uv|U02436.1:3152-4436	1144	1160	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch12, complete genome	2.110817942
CLCdnRY7_9056	1	1	736	757	uv|KM062044.1:2507-3208	565	544	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 60 (LOC102600954), mRNA	2.774108322
CLCdnRY4_65703	1	1	741	757	uv|U02436.1:3152-4436	1144	1160	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch12, complete genome	2.113606341
CLCdnRY7_4535	1	1	728	743	uv|Z29589.1:3211-4486	206	191	Weak	Weak	Suspect[744,757];	TRUE_BIOLOGICAL	4527	1	PREDICTED: Solanum tuberosum enolase-like (LOC102595943), transcript variant X1, mRNA	1.981505945
CLCdnRY1_46386	1	1	735	751	uv|AF129072.1:5274-5321-49	55	39	Weak	Weak	Suspect[752,756];	NO_DATA	1	1	PREDICTED: Solanum tuberosum dehydration-responsive element-binding protein 1E-like (LOC102585416), mRNA	2.116402116
CLCdnRY3_7426	1	1	732	747	uv|U47294.2:1-1774	644	629	Weak	Weak	Suspect[748,756];	TRUE_BIOLOGICAL	10508	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590314 (LOC102590314), mRNA	1.984126984
VdnRY6_2401	1	1	22	37	uv|M28248.1:1-1709	1540	1555	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	153135	1	PREDICTED: Solanum tuberosum protein SCAR2 (LOC102601152), transcript variant X2, mRNA	1.984126984
SdnRY1_37693	1	1	739	754	uv|M16192.1:1-2517-49	1069	1084	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum extensin-2-like (LOC102596521), transcript variant X2, mRNA	1.98938992
VdnRY3_2089	1	1	7	22	uv|X05868.1:399-578	138	123	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum flavonol synthase/flavanone 3-hydroxylase-like (LOC102590301), mRNA	1.992031873
VdnRY5_8131	1	1	2	19	uv|JF909481.1:3855-5640	1086	1103	Weak	Weak	Suspect[1,1];	NO_DATA	1	1		2.260638298
CLCdnRY5_24108	1	1	5	20	uv|KC503966.1:1435-1589	140	125	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum axial regulator YABBY 5-like (LOC102578472), mRNA	1.994680851
CLCdnRY10_21989	1	1	725	740	uv|GU593054.1:6136-8806	766	781	Weak	Weak	Suspect[741,750];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative glycine-rich cell wall structural protein 1 (LOC102582525), mRNA	2
SdnRY1_37869	1	1	722	737	uv|JF909482.1:3850-8059	3154	3139	Weak	Weak	Suspect[738,750];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum cytosolic sulfotransferase 12-like (LOC102603392), mRNA	2
PBdnRY1_2324	1	1	553	593	uv|KF719004.1:2204-2946	73	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	Solanum tuberosum ribulose bisphosphate carboxylase small chain C, chloroplastic-like (RBCS-C), mRNA<>Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds	5.340453939
CLCdnRY9_69589	1	1	4	19	uv|M12787.1:700-815	60	75	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585593 (LOC102585593), mRNA	2.005347594
CLCdnRY3_43949	1	1	722	737	uv|U09476.1:1-864	105	90	Weak	Weak	Suspect[738,748];	TRUE_BIOLOGICAL	581	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596342 (LOC102596342), transcript variant X11, mRNA	2.005347594
PBdnRY1_2708	1	1	511	563	uv|KF719004.1:2204-2946	61	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	6.961178046
PBdnRY1_6447	1	1	726	741	uv|U67875.1:18-1316	428	443	Weak	Weak	Suspect[742,747];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum plastocyanin, chloroplastic (LOC102583807), mRNA	2.008032129
CLCdnRY11_22917	1	1	702	729	uv|U13189.1:9688-10585	233	206	Moderate	Moderate	Suspect[730,745];	NO_DATA	1	1	PREDICTED: Solanum pennellii uncharacterized LOC107017124 (LOC107017124), mRNA	3.624161074
CLCdnRY3_3755	1	1	6	21	uv|U03498.1:7366-8059	357	372	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cDNA, clone: LEFL1049AG07, HTC in leaf	2.013422819
VdnRY6_6196	1	1	714	729	uv|M77169.1:820-5161	3491	3506	Weak	Weak	Suspect[730,745];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum SUMO-conjugating enzyme SCE1-like (LOC102581266), mRNA	2.013422819
CLCdnRY2_24268	1	1	718	744	uv|NGB00844.1:1-48	1	27	Strong	Strong	None	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum pathogenesis-related protein PR-1-like (LOC102581167), mRNA	3.494623656
CLCdnRY2_24268	1	1	716	737	uv|JX069762.1:9774-9902-49	48	69	Moderate	Strong	None	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum pathogenesis-related protein PR-1-like (LOC102581167), mRNA	2.822580645
CLCdnRY10_55113	1	1	729	744	uv|KC702198.1:1-1023	487	472	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum lignin-forming anionic peroxidase-like (LOC102599828), mRNA	2.016129032
CLCdnRY11_74804	1	1	726	741	uv|J02459.1:1-48502-49	14053	14038	Weak	Weak	Suspect[742,744];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum dynein assembly factor with WDR repeat domains 1-like (LOC102586150), transcript variant X2, mRNA	2.016129032
CLCdnRY3_36695	1	1	708	724	uv|M77169.1:820-5161	631	615	Weak	Weak	Suspect[1,12];Suspect[725,743];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum auxin-responsive protein IAA3-like (LOC102587488), mRNA	2.153432032
CLCdnRY3_36695	1	1	13	28	uv|AF379854.1:4263-5841	293	278	Weak	Weak	Suspect[1,12];Suspect[725,743];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum auxin-responsive protein IAA3-like (LOC102587488), mRNA	2.01884253
CLCdnRY10_9801	1	1	172	212	uv|KF719004.1:2204-2946	113	73	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	Nicotiana tabacum putative ribulose bisphosphate carboxylase small subunit protein precursor, mRNA, complete cds; nuclear gene for chloroplast product	5.398110661
CLCdnRY11_9705	1	1	172	212	uv|KF719004.1:2204-2946	113	73	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	Nicotiana tabacum putative ribulose bisphosphate carboxylase small subunit protein precursor, mRNA, complete cds; nuclear gene for chloroplast product	5.398110661
CLCdnRY12_23439	1	1	698	725	uv|U13189.1:9688-10585	233	206	Moderate	Moderate	Suspect[726,741];	NO_DATA	1	1	PREDICTED: Solanum pennellii uncharacterized LOC107017124 (LOC107017124), mRNA	3.643724696
SdnRY1_38237	1	1	710	728	uv|AF379854.1:4263-5841	494	476	Moderate	Moderate	Suspect[729,740];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum ubiquitin-like domain-containing CTD phosphatase 1 (LOC102597482), transcript variant X2, mRNA	2.432432432
SdnRY1_38341	1	1	15	31	uv|M98046.1:2386-3803	899	915	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum fatty acyl-CoA reductase 1-like (LOC102581314), transcript variant X2, mRNA	2.16802168
VdnRY5_10315	1	1	699	715	uv|KF719005.1:2205-5132	2699	2683	Weak	Weak	Suspect[716,738];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum vacuolar protein-sorting-associated protein 37 homolog 1 (LOC102601485), mRNA	2.16802168
CLCdnRY12_1947	1	1	18	33	uv|U42371.1:920-1342	115	130	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum small ubiquitin-related modifier 1-like (LOC102593982), mRNA	2.032520325
VdnRY2_25167	1	1	702	719	uv|KF719019.1:2203-2843	503	486	Weak	Weak	Suspect[720,737];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 (LOC102579582), mRNA	2.306648575
CLCdnRY3_59247	1	1	694	711	uv|KC702165.1:1-1023	161	144	Weak	Weak	Suspect[712,734];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum stellacyanin-like (LOC102595852), mRNA	2.316076294
SdnRY1_38467	1	1	15	31	uv|M35007.1:1327-1473	129	113	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	2.179836512
VdnRY1_6133	1	1	712	727	uv|X70481.1:3564-4492	613	598	Weak	Weak	Suspect[728,734];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum lectin-domain containing receptor kinase VI.3-like (LOC102605004), mRNA	2.04359673
CLCdnRY10_70896	1	1	1	22	uv|KM062044.1:2507-3208	543	564	Moderate	Moderate	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable xyloglucan endotransglucosylase/hydrolase protein 10 (LOC102596094), mRNA	2.864938608
VdnRY1_1368	1	1	1	16	uv|HM162846.2:4343-4724	143	158	Weak	Weak	None	TRUE_BIOLOGICAL	5690	1	PREDICTED: Solanum tuberosum oxygen-evolving enhancer protein 1, chloroplastic (LOC102577458), mRNA	2.04638472
CLCdnRY10_22487	1	1	17	33	uv|U02452.1:4310-5466	91	107	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	558016	1	Solanum pennellii chromosome ch08, complete genome	2.18579235
SdnRY1_38591	1	1	10	27	uv|KM407508.1:3392-3619	70	53	Weak	Weak	Suspect[1,9];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum beta-galactosidase 16-like (LOC102584845), transcript variant X3, mRNA	2.325581395
SdnRY1_38579	1	1	1	17	uv|KF718989.1:2199-3181	124	108	Weak	Weak	None	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062181 (LOC107062181), ncRNA	2.18878249
VdnRY4_54523	1	1	689	707	uv|J02459.1:1-48502-49	1248	1266	Moderate	Moderate	Suspect[708,730];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum subtilisin-like protease SBT1.7 (LOC102579454), mRNA	2.465753425
SdnRY1_38621	1	1	709	724	uv|LC121521.1:3233-3335	61	76	Weak	Weak	Suspect[725,730];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum cytochrome P450 71A4-like (LOC102589634), mRNA	2.054794521
SdnRY1_38599	1	1	715	730	uv|M16192.1:1-2517-49	1069	1084	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum extensin-2-like (LOC102596521), transcript variant X2, mRNA	2.054794521
VdnRY1_52356	1	1	12	28	uv|JQ927446.1:4885-6835-49	1114	1098	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 90A1-like (LOC107062557), transcript variant X2, mRNA	2.19478738
CLCdnRY10_15863	1	1	704	719	uv|AY962893.1:8266-9065	713	728	Weak	Weak	Suspect[720,729];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum tuberosum uncharacterized LOC107063177 (LOC107063177), mRNA	2.057613169
VdnRY7_19495	1	1	10	25	uv|AF379854.1:3-2710	1855	1870	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum vesicle transport protein GOT1B-like (LOC102580305), mRNA	2.057613169
SdnRY1_38740	1	1	5	24	uv|GU593055.1:13024-13902-49	789	808	Moderate	Moderate	Suspect[1,4];	TRUE_BIOLOGICAL	2093	1	PREDICTED: Solanum tuberosum fasciclin-like arabinogalactan protein 12 (LOC102593204), mRNA	2.613480055
SdnRY1_38714	1	1	14	29	uv|KF811456.1:1402-1489	8	23	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	Solanum pennellii chromosome ch03, complete genome	2.063273728
CLCdnRY8_10369	1	1	691	706	uv|KC702172.1:1-1026	65	50	Weak	Weak	Suspect[707,726];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum carbamoyl-phosphate synthase small chain, chloroplastic-like (LOC102589678), transcript variant X2, mRNA	2.066115702
CLCdnRY3_28352	1	1	20	36	uv|AF237704.1:5192-5677	420	404	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC102587823), mRNA	2.213001383
CLCdnRY1_11728	1	1	8	23	uv|M16217.1:1-2529	2509	2524	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein NDR1-like (LOC102588433), mRNA	2.074688797
CLCdnRY10_16306	1	1	685	700	uv|U02436.1:3152-4436	643	628	Weak	Weak	Suspect[701,721];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 1	2.080443828
CLCdnRY4_15337	1	1	685	700	uv|U02436.1:3152-4436	643	628	Weak	Weak	Suspect[701,721];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 1	2.080443828
VdnRY2_25786	1	1	19	34	uv|JF909482.1:3850-8059	2453	2468	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592452 (LOC102592452), mRNA	2.080443828
CLCdnRY8_34833	1	1	23	39	uv|KM407512.1:886-4985	3135	3151	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 1	2.222222222
CLCdnRY12_43730	1	1	698	713	uv|U56997.1:666-762	53	38	Weak	Weak	Suspect[714,720];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	2.083333333
CLCdnRY9_55175	1	1	702	717	uv|Z46234.1:7923-9273	1313	1328	Weak	Weak	Suspect[718,720];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060674 (LOC107060674), mRNA	2.083333333
CLCdnRY10_30808	1	1	10	27	uv|L08934.1:171-1487	1112	1129	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum receptor-like kinase TMK4 (LOC102578437), mRNA	2.364394993
CLCdnRY6_14370	1	1	13	30	uv|J01636.1:1-7477	4694	4677	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	620	1	Solanum tuberosum MADS16 protein (MADS16), mRNA<>Solanum tuberosum MADS16 (MADS16) mRNA, complete cds	2.364394993
CLCdnRY7_49314	1	1	21	36	uv|KF718996.1:2914-4532	1487	1472	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102591225 (LOC102591225), mRNA	2.086230876
VdnRY4_56393	1	1	692	707	uv|KF718978.1:2204-3575	550	565	Weak	Weak	Suspect[708,717];	TRUE_BIOLOGICAL	3700	1	Solanum tuberosum TATA-box-binding protein-like (LOC102583666), mRNA<>S.tuberosum mRNA for TATA-binding protein	2.092050209
CLCdnRY11_47631	1	1	684	699	uv|KM407512.1:886-4985	2447	2432	Weak	Weak	Suspect[700,715];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probable mediator of RNA polymerase II transcription subunit 26b (LOC102586751), mRNA	2.097902098
CLCdnRY1_55290	1	1	4	19	uv|KC503967.1:1442-2279	734	749	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC107059974 (LOC107059974), mRNA	2.097902098
VdnRY3_42371	1	1	14	30	uv|FM991889.1:1-391	186	202	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	2.244039271
CLCdnRY3_11845	1	1	695	710	uv|U67875.1:18-1316	732	717	Weak	Weak	Suspect[711,713];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum pennellii malonyl-coenzyme:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase-like (LOC107032570), mRNA	2.103786816
VdnRY3_22564	1	1	401	453	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	7.303370787
CLCdnRY2_7358	1	1	693	710	uv|JN874480.1:1050-2714	497	514	Weak	Weak	Suspect[711,712];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum proteasome subunit alpha type-3-like (LOC102581342), mRNA	2.387640449
CLCdnRY3_5407	1	1	2	18	uv|AF078810.1:1409-1662	159	175	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum uncharacterized LOC104648056 (LOC104648056), mRNA	2.247191011
CLCdnRY10_16488	1	1	10	25	uv|EF036510.1:3131-3650	52	67	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum S-type anion channel SLAH1-like (LOC102595187), mRNA	2.106741573
CLCdnRY8_19761	1	1	683	698	uv|M28248.1:2832-3628	366	381	Weak	Weak	Suspect[699,711];	TRUE_BIOLOGICAL	10066	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1B-13 (LOC102594054), mRNA	2.109704641
CLCdnRY11_17121	1	1	1	17	uv|NGB00117.1:1092-1167	50	34	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum 5'-nucleotidase SurE-like (LOC102600953), mRNA	2.256699577
VdnRY1_37851	1	1	665	687	uv|KC702170.1:1-1957	86	108	Weak	Weak	Suspect[688,708];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC102605830 (LOC102605830), transcript variant X2, mRNA	3.107344633
CLCdnRY12_83127	1	1	680	695	uv|KF719006.1:2204-2928	239	254	Weak	Weak	Suspect[696,707];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578269 (LOC102578269), transcript variant X3, mRNA	2.121640736
CLCdnRY3_38387	1	1	13	28	uv|AB777649.1:1808-4608-49	1116	1101	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1B-13 (LOC107058848), mRNA	2.121640736
CLCdnRY9_39438	1	1	13	28	uv|AB777649.1:1808-4608-49	1116	1101	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1B-13 (LOC107058848), mRNA	2.121640736
SdnRY1_39537	1	1	33	69	uv|KM407503.1:195-967	266	302	Moderate	Moderate	Suspect[1,32];	TRUE_BIOLOGICAL	33208	1	PREDICTED: Solanum tuberosum histone H3.2-like (LOC102584625), mRNA	5.099150142
VdnRY1_9970	1	1	74	698	uv|J02482.1:1-5386-49	3775	3164	Strong	Strong	Suspect[699,705];	TRUE_BIOLOGICAL	10842	1	Coliphage phi-X174, complete genome	88.5106383
VdnRY1_9970	1	1	1	73	uv|J02482.1:1-5386-49	3802	3730	Strong	Strong	Suspect[699,705];	TRUE_BIOLOGICAL	10842	1	Coliphage phi-X174, complete genome	10.21276596
SdnRY1_39591	1	1	666	681	uv|JF909482.1:3850-8059	1762	1747	Weak	Weak	Suspect[682,705];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum kirola-like (LOC102596428), mRNA	2.127659574
CLCdnRY10_6669	1	1	663	679	uv|JF909482.1:3850-8059	3580	3564	Weak	Weak	Suspect[680,703];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum pennellii 50S ribosomal protein L24, chloroplastic (LOC107026312), mRNA	2.275960171
VdnRY7_4218	1	1	2	17	uv|Z32692.1:5183-6220	145	130	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	10240	1	Solanum stoloniferum isolate SS16 chloroplast, complete genome	2.136752137
CLCdnRY12_33000	1	1	18	33	uv|M16192.1:1-2517-49	1557	1542	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum pennellii uncharacterized LOC107004839 (LOC107004839), mRNA	2.142857143
CLCdnRY2_44061	1	1	17	32	uv|U02452.1:4310-5466	97	112	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum F-box protein At4g19940-like (LOC107058441), mRNA	2.142857143
CLCdnRY3_63962	1	1	676	692	uv|M77169.1:820-5161	933	917	Weak	Weak	Suspect[693,699];	TRUE_BIOLOGICAL	1485	1	Solanum pennellii chromosome ch11, complete genome	2.288984263
CLCdnRY12_15656	1	1	3	18	uv|KF718989.1:2199-3181	76	91	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum NEDD8-conjugating enzyme Ubc12-like (LOC102598117), transcript variant X1, mRNA	2.145922747
SdnRY1_39825	1	1	213	265	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	7.449856734
CLCdnRY7_57377	1	1	676	692	uv|U13189.1:15605-15827-49	113	97	Weak	Weak	Suspect[693,698];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 6	2.29226361
CLCdnRY9_13719	1	1	7	23	uv|Z46234.1:7923-9273	983	967	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum dihydrolipoyl dehydrogenase 1, mitochondrial (LOC102605442), mRNA	2.29226361
CLCdnRY2_26003	1	1	10	25	uv|U02456.1:1-1930	1783	1768	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583883 (LOC102583883), mRNA	2.148997135
CLCdnRY10_59701	1	1	672	687	uv|KC702228.1:1-1023	67	82	Weak	Weak	Suspect[688,697];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584423 (LOC102584423), mRNA	2.152080344
PBdnRY1_6218	1	1	671	687	uv|U13843.1:1887-9923	2568	2584	Weak	Weak	Suspect[688,696];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum 60S ribosomal protein L30-like (LOC102583223), mRNA	2.298850575
SdnRY1_39941	1	1	19	35	uv|EU496100.1:270-2269	1143	1127	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	2.298850575
CLCdnRY11_59229	1	1	680	695	uv|KF719005.1:2205-5132	1513	1498	Weak	Weak	Suspect[696,696];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589289 (LOC102589289), mRNA	2.155172414
CLCdnRY2_7221	1	1	14	33	uv|LC121524.1:7013-8404-8	261	242	Moderate	Moderate	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum calmodulin (LOC102593468), mRNA	2.73381295
CLCdnRY3_41602	1	1	664	680	uv|M16192.1:1-2517-49	874	890	Weak	Weak	Suspect[681,693];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC102582520), mRNA	2.308802309
CLCdnRY8_27451	1	1	655	671	uv|JQ394802.1:1401-1564	93	109	Weak	Weak	Suspect[672,692];	NO_DATA	1	1	PREDICTED: Solanum tuberosum replication protein A 70 kDa DNA-binding subunit B-like (LOC102584236), transcript variant X22, misc_RNA	2.312138728
VdnRY7_229	1	1	23	38	uv|KM407512.1:886-4985	1036	1051	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum putative gamma-glutamylcyclotransferase At3g02910 (LOC107059245), mRNA	2.167630058
CLCdnRY12_4740	1	1	670	686	uv|KF719005.1:2205-5132	2312	2296	Weak	Weak	Suspect[687,691];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch08, complete genome	2.315484805
CLCdnRY1_1211	1	1	14	29	uv|DQ230323.1:1751-1819	42	57	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	620	1	Solanum tuberosum malate dehydrogenase-like protein (LOC102577663), mRNA<>Solanum tuberosum clone 093D06 malate dehydrogenase-like protein mRNA, complete cds	2.170767004
CLCdnRY8_41348	1	1	669	685	uv|U29899.1:1847-4463	1755	1771	Weak	Weak	Suspect[686,690];	TRUE_BIOLOGICAL	4892	1		2.31884058
SdnRY1_40201	1	1	674	689	uv|KC702181.1:1-1123	829	844	Weak	Weak	Suspect[690,690];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum WD repeat-containing protein 44-like (LOC102602947), mRNA	2.173913043
SdnRY1_40240	1	1	673	689	uv|AF379854.1:3-2710	501	517	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum BON1-associated protein 2 (LOC102586326), mRNA	2.322206096
VdnRY6_2491	1	1	13	29	uv|NGB00413.1:1-3960	622	606	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	12103	1	Solanum pennellii chromosome ch12, complete genome	2.322206096
SdnRY1_40310	1	1	667	684	uv|KF718996.1:2914-4532	1058	1041	Weak	Weak	Suspect[685,687];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein MODIFIER OF SNC1 11-like (LOC102591754), transcript variant X1, mRNA	2.474526929
SdnRY1_40315	1	1	2	17	uv|JX560397.1:83-5970	707	692	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	1236	1	Solanum tuberosum clone BAC 14B N-like putative resistance gene 1, N-like putative resistance gene 2, N-like putative resistance gene 3, and putative lyases genes, complete cds, complete sequence	2.183406114
SdnRY1_40332	1	1	201	253	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	7.580174927
SdnRY1_40333	1	1	201	253	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	7.580174927
CLCdnRY1_15250	1	1	11	26	uv|AF090452.1:1905-2082	159	174	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum SAGA-associated factor 73-like (LOC102603949), mRNA	2.186588921
CLCdnRY12_74625	1	1	662	677	uv|KC702211.1:1-536	33	48	Weak	Weak	Suspect[678,686];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 38 (LOC102589530), mRNA	2.186588921
VdnRY4_22448	1	1	15	30	uv|U09128.1:3334-10218	707	722	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588626 (LOC102588626), transcript variant X2, mRNA	2.186588921
SdnRY1_40368	1	1	200	252	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	7.591240876
SdnRY1_40369	1	1	200	252	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	7.591240876
CLCdnRY4_77999	1	1	651	667	uv|JN581377.1:1749-2242	258	242	Weak	Weak	Suspect[670,685];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum feruloyl CoA ortho-hydroxylase 1 (LOC102584589), mRNA	2.335766423
CLCdnRY4_77999	1	1	653	669	uv|KJ541666.1:4495-4534-49	89	73	Weak	Weak	Suspect[670,685];	NO_DATA	1	1	PREDICTED: Solanum tuberosum feruloyl CoA ortho-hydroxylase 1 (LOC102584589), mRNA	2.335766423
CLCdnRY1_26136	1	1	648	664	uv|JQ394802.1:1401-1564	93	109	Weak	Weak	Suspect[665,685];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599538 (LOC102599538), transcript variant X14, misc_RNA	2.335766423
CLCdnRY3_58070	1	1	659	675	uv|KF853601.1:1021-3588	2162	2146	Weak	Weak	Suspect[676,682];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum CDT1-like protein a, chloroplastic (LOC102583611), mRNA	2.346041056
CLCdnRY7_54524	1	1	658	673	uv|M16217.1:1-2529	86	101	Weak	Weak	Suspect[674,682];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum probable rhamnogalacturonate lyase B (LOC102598894), mRNA	2.19941349
SdnRY1_40517	1	1	196	248	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	7.635829662
CLCdnRY11_77262	1	1	1	22	uv|KM062044.1:2507-3208	543	564	Moderate	Moderate	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable xyloglucan endotransglucosylase/hydrolase protein 10 (LOC102596094), mRNA	3.083700441
CLCdnRY1_5335	1	1	663	679	uv|U09128.1:3334-10218	4611	4627	Weak	Weak	Suspect[680,681];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum translocon-associated protein subunit alpha-like (LOC102601148), mRNA	2.34948605
VdnRY4_7291	1	1	646	662	uv|KF718979.1:2206-6730	4139	4155	Weak	Weak	Suspect[663,681];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589648 (LOC102589648), transcript variant X1, mRNA	2.34948605
CLCdnRY10_68870	1	1	6	21	uv|KC702194.1:1-1023	857	872	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	196118	1	Solanum tuberosum SWEET transporter protein 1c mRNA, complete cds	2.202643172
CLCdnRY4_1996	1	1	654	672	uv|U13189.1:9688-10585	699	717	Moderate	Moderate	Suspect[673,680];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578315 (LOC102578315), mRNA	2.647058824
VdnRY5_10449	1	1	655	672	uv|U13849.1:745-843	39	56	Weak	Weak	Suspect[673,680];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized protein PAM68-like (LOC102602569), mRNA	2.5
VdnRY4_6926	1	1	643	658	uv|AF379854.1:3-2710	683	698	Weak	Weak	Suspect[659,680];	TRUE_BIOLOGICAL	5820	1	Solanum tuberosum clone RH130M06, complete sequence	2.205882353
VdnRY1_67522	1	1	649	666	uv|L08862.1:1-2039	1309	1292	Weak	Weak	Suspect[667,679];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum non-specific lipid-transfer protein 1-like (LOC102587043), mRNA	2.503681885
CLCdnRY11_75136	1	1	5	20	uv|KC702194.1:1-1023	857	872	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	196118	1	Solanum tuberosum SWEET transporter protein 1c mRNA, complete cds	2.209131075
CLCdnRY6_33662	1	1	3	20	uv|KY031737.1:1-5023	1389	1372	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum HMG-Y-related protein A-like (LOC102582893), mRNA	2.507374631
VdnRY7_8758	1	1	645	660	uv|M33622.1:1-1483	638	653	Weak	Weak	Suspect[661,678];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable galactinol--sucrose galactosyltransferase 6 (LOC102586320), mRNA	2.212389381
SdnRY1_40719	1	1	642	657	uv|EF583812.1:10164-10415	29	44	Weak	Weak	Suspect[658,677];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593552 (LOC102593552), transcript variant X3, ncRNA	2.215657312
CLCdnRY3_4575	1	1	2	17	uv|LC121520.1:2705-3093	168	183	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 73C3-like (LOC102600577), mRNA	2.218934911
SdnRY1_40755	1	1	2	17	uv|KP057689.1:1-859	343	328	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	84111	1	Solanum lycopersicum cultivar I-3 chromosome 4	2.218934911
CLCdnRY12_20560	1	1	18	33	uv|GU593054.1:6136-8806	1511	1526	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 1.2-like (LOC102579133), mRNA	2.222222222
VdnRY5_22056	1	1	643	658	uv|U59231.1:5103-7490	2000	2015	Weak	Weak	Suspect[659,675];	TRUE_BIOLOGICAL	5658	1	PREDICTED: Solanum tuberosum glutaredoxin domain-containing cysteine-rich protein 1 (LOC102606278), mRNA	2.222222222
SdnRY1_40818	1	1	24	41	uv|KC702165.1:1-1023	144	161	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum stellacyanin-like (LOC102595852), mRNA	2.522255193
VdnRY1_68173	1	1	15	31	uv|X70481.1:3564-4492	737	753	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102595401 (LOC102595401), mRNA	2.37388724
VdnRY3_12575	1	1	632	649	uv|U02450.1:267-443	119	102	Weak	Weak	Suspect[650,673];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum mitochondrial inner membrane protease subunit 1-like (LOC102592437), mRNA	2.526002972
VdnRY4_16101	1	1	4	20	uv|U03498.1:4566-4750	4	20	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102598575), transcript variant X1, mRNA	2.384500745
VdnRY4_16099	1	1	4	20	uv|U03498.1:4566-4750	4	20	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102598575), transcript variant X1, mRNA	2.384500745
VdnRY5_9326	1	1	14	30	uv|U03498.1:4566-4750	4	20	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102598575), transcript variant X3, mRNA	2.384500745
VdnRY5_9328	1	1	14	30	uv|U03498.1:4566-4750	4	20	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102598575), transcript variant X3, mRNA	2.384500745
VdnRY5_9327	1	1	14	30	uv|U03498.1:4566-4750	4	20	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102598575), transcript variant X3, mRNA	2.388059701
SdnRY1_41000	1	1	649	666	uv|KF718996.1:2914-4532	1058	1041	Weak	Weak	Suspect[667,669];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein MODIFIER OF SNC1 11-like (LOC102591754), transcript variant X2, mRNA	2.541106129
CLCdnRY10_51520	1	1	10	25	uv|AF379854.1:3-2710	684	669	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587475 (LOC102587475), mRNA	2.242152466
CLCdnRY4_50062	1	1	652	667	uv|AY619006.1:1993-2089	58	43	Weak	Weak	Suspect[668,669];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102603100 (LOC102603100), mRNA	2.242152466
CLCdnRY3_48852	1	1	634	649	uv|NGB00587.1:1-3232	1478	1463	Weak	Weak	Suspect[650,668];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	2.245508982
CLCdnRY6_26437	1	1	22	37	uv|U02436.1:3152-4436	614	629	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum GDSL esterase/lipase At5g45910-like (LOC102592574), mRNA	2.245508982
CLCdnRY4_20749	1	1	22	37	uv|KP057689.1:1-859	809	794	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum exocyst complex component SEC8 (LOC102602228), mRNA	2.248875562
CLCdnRY11_28725	1	1	1	16	uv|D14641.1:1-453	251	236	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum glucan endo-1,3-beta-glucosidase A-like (LOC102579100), mRNA	2.259036145
CLCdnRY5_28468	1	1	1	16	uv|D14641.1:1-453	251	236	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum glucan endo-1,3-beta-glucosidase A-like (LOC102579100), mRNA	2.259036145
PBdnRY1_8465	1	1	22	37	uv|NGB00352.1:1-151	61	46	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 40S ribosomal protein S11 (LOC102584890), mRNA	2.262443439
CLCdnRY5_34642	1	1	640	655	uv|NGB00973.1:1-35	34	19	Weak	Weak	Suspect[656,663];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cyclic phosphodiesterase-like (LOC107062256), mRNA	2.262443439
CLCdnRY10_3294	1	1	6	22	uv|JN900237.1:1151-3072-49	1694	1710	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum enolase-like (LOC102595943), transcript variant X1, mRNA	2.416918429
SdnRY1_41314	1	1	6	21	uv|KC702183.1:1-1023	199	214	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum aldose 1-epimerase-like (LOC102590807), transcript variant X4, mRNA	2.265861027
VdnRY5_3129	1	1	635	650	uv|KM407512.1:886-4985	2761	2776	Weak	Weak	Suspect[651,662];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum PHD finger protein Alfin1-like (LOC102590033), mRNA	2.265861027
VdnRY3_19126	1	1	5	21	uv|EU048866.1:1404-1498	47	31	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ATP-dependent RNA helicase glh-2-like (LOC107061407), mRNA	2.420574887
CLCdnRY12_55563	1	1	623	638	uv|U13864.1:2748-4229-44	1473	1488	Weak	Weak	Suspect[639,661];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597248 (LOC102597248), transcript variant X4, mRNA	2.269288956
CLCdnRY12_29228	1	1	6	22	uv|KC702169.1:1-808	567	551	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum cysteine-rich receptor-like protein kinase 10 (LOC102603268), transcript variant X2, mRNA	2.427921093
CLCdnRY6_29279	1	1	6	22	uv|KC702169.1:1-808	567	551	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum cysteine-rich receptor-like protein kinase 10 (LOC102603268), transcript variant X2, mRNA	2.427921093
CLCdnRY3_13	1	1	10	26	uv|AF327712.1:16794-18581	903	919	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (LOC102587206), mRNA	2.431610942
SdnRY1_41460	1	1	636	651	uv|AF102576.1:1-3461	3281	3296	Weak	Weak	Suspect[652,658];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable transcription factor KAN4 (LOC102601842), mRNA	2.279635258
CLCdnRY12_11117	1	1	642	657	uv|U10459.1:6337-6662	161	176	Weak	Weak	None	TRUE_BIOLOGICAL	10639	1	PREDICTED: Solanum lycopersicum uncharacterized protein At5g64816 (LOC101257761), transcript variant X1, mRNA	2.283105023
CLCdnRY3_11596	1	1	624	639	uv|M34305.1:3197-4538	1186	1201	Weak	Weak	Suspect[640,657];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum PRA1 family protein F3-like (LOC102592193), mRNA	2.283105023
CLCdnRY11_81064	1	1	635	650	uv|JQ394802.1:2347-2475	102	87	Weak	Weak	Suspect[651,656];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum cinnamoyl-CoA reductase 1-like (LOC102579943), mRNA	2.286585366
CLCdnRY5_55599	1	1	622	637	uv|J02482.1:1-5386-49	5131	5116	Weak	Weak	Suspect[638,656];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 91A1-like (LOC102599178), mRNA	2.286585366
VdnRY3_80045	1	1	4	22	uv|KM407512.1:886-4985	2450	2432	Moderate	Moderate	Suspect[1,3];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589514 (LOC102589514), mRNA	2.748091603
SdnRY1_41550	1	1	1	17	uv|U55760.1:1-2749	2087	2071	Weak	Weak	None	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum heat stress transcription factor B-2a-like (LOC102597973), mRNA	2.442748092
VdnRY4_12626	1	1	619	636	uv|U14124.1:1-466	143	160	Weak	Weak	Suspect[637,654];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized LOC102594704 (LOC102594704), mRNA	2.599388379
CLCdnRY3_14	1	1	6	22	uv|AF327712.1:16794-18581	903	919	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (LOC102587206), mRNA	2.44648318
PBdnRY1_4187	1	1	13	28	uv|U09663.1:197-287	70	55	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	40674	1	Solanum tuberosum ribosomal protein PETRP-like (LOC102577682), mRNA<>Solanum tuberosum clone 063E12 ribosomal protein PETRP-like mRNA, complete cds	2.293577982
CLCdnRY12_25305	1	1	622	637	uv|EF216318.1:622-720	25	40	Weak	Weak	Suspect[638,653];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum endoglucanase 6-like (LOC102589512), mRNA	2.297090352
CLCdnRY3_48490	1	1	22	37	uv|KF718979.1:2206-6730	517	502	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum chromosome ch05, complete genome	2.300613497
CLCdnRY9_45976	1	1	1	16	uv|Z46234.1:7923-9273	1031	1016	Weak	Weak	None	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum protein ECERIFERUM 1-like (LOC102579884), mRNA	2.300613497
SdnRY1_41687	1	1	14	29	uv|KF811456.1:1402-1489	8	23	Weak	Weak	Suspect[1,13];Suspect[651,652];	NO_DATA	1	1	Solanum pennellii chromosome ch03, complete genome	2.300613497
SdnRY1_41687	1	1	635	650	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[1,13];Suspect[651,652];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch03, complete genome	2.300613497
VdnRY7_16446	1	1	8	23	uv|X06779.1:1-4734	249	264	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum transcription and mRNA export factor SUS1 (LOC102602973), mRNA	2.304147465
CLCdnRY12_44577	1	1	13	28	uv|DQ493886.2:2848-2947	41	56	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable serine/threonine-protein kinase At1g18390 (LOC102588115), mRNA	2.304147465
VdnRY7_10287	1	1	620	635	uv|LC121520.1:4008-4664	124	109	Weak	Weak	Suspect[636,649];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum axial regulator YABBY 5-like (LOC102578472), mRNA	2.311248074
SdnRY1_41938	1	1	630	645	uv|X51450.1:2521-3852	696	711	Weak	Weak	Suspect[646,647];	TRUE_BIOLOGICAL	91061	1	Solanum pennellii chromosome ch06, complete genome	2.318392581
CLCdnRY7_23124	1	1	12	27	uv|X67019.1:1-666	392	407	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	620	1	Solanum tuberosum putative trehalose synthase (StTS1) gene, exons 1 through 4 and complete cds	2.321981424
CLCdnRY10_51236	1	1	617	632	uv|M28701.1:215-396	153	138	Weak	Weak	Suspect[633,646];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum aspartic proteinase Asp1 (LOC102579195), mRNA	2.321981424
CLCdnRY8_13402	1	1	608	623	uv|JX560397.1:83-5970	3778	3763	Weak	Weak	Suspect[624,646];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum lycopersicum probable glycosyltransferase At5g11130 (LOC101257920), mRNA	2.321981424
CLCdnRY8_13402	1	1	604	619	uv|KM407512.1:886-4985	1656	1641	None	Weak	Suspect[624,646];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum probable glycosyltransferase At5g11130 (LOC101257920), mRNA	2.321981424
SdnRY1_41958	1	1	14	29	uv|KF811456.1:1402-1489	8	23	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	Solanum pennellii chromosome ch03, complete genome	2.321981424
SdnRY1_41959	1	1	14	29	uv|KF811456.1:1402-1489	8	23	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	Solanum pennellii chromosome ch03, complete genome	2.321981424
VdnRY2_41333	1	1	1	16	uv|NGB00143.1:3812-3899-43	28	13	Weak	Weak	None	NO_DATA	1	1	Solanum tuberosum mitogen-activated protein kinase homolog NTF4-like (LOC102583418), mRNA<>Solanum tuberosum StMPK2 mRNA for mitogen-activated protein kinase, complete cds	2.321981424
CLCdnRY12_48713	1	1	620	637	uv|FJ710109.1:6726-9221	2201	2218	Weak	Weak	Suspect[643,644];	TRUE_BIOLOGICAL	10375	1	PREDICTED: Solanum tuberosum uncharacterized LOC107058642 (LOC107058642), transcript variant X2, ncRNA	2.639751553
CLCdnRY12_48713	1	1	627	642	uv|FJ710109.1:6726-9221	2202	2217	Weak	Weak	Suspect[643,644];	TRUE_BIOLOGICAL	10375	1	PREDICTED: Solanum tuberosum uncharacterized LOC107058642 (LOC107058642), transcript variant X2, ncRNA	2.329192547
SdnRY1_42104	1	1	619	634	uv|M77169.1:820-5161	1232	1217	Weak	Weak	Suspect[635,643];	TRUE_BIOLOGICAL	1485	1	Solanum pennellii chromosome ch04, complete genome	2.33281493
CLCdnRY10_69558	1	1	608	623	uv|AY962893.1:3682-3780	30	45	Weak	Weak	Suspect[624,643];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590743 (LOC102590743), mRNA	2.33281493
CLCdnRY12_35682	1	1	25	41	uv|NGB00680.1:1-53	11	27	Weak	Weak	Suspect[1,24];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum uncharacterized LOC102597557 (LOC102597557), mRNA	2.492211838
CLCdnRY8_42776	1	1	607	623	uv|KC702177.1:1-1138	966	950	Weak	Weak	Suspect[624,642];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum uncharacterized LOC102578458 (LOC102578458), transcript variant X2, mRNA	2.492211838
CLCdnRY2_2811	1	1	609	624	uv|JN874480.1:1050-2714	480	465	Weak	Weak	Suspect[625,642];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum succinate dehydrogenase subunit 6, mitochondrial-like (LOC102582349), mRNA	2.336448598
SdnRY1_42167	1	1	604	619	uv|U67875.1:8796-9922	202	217	Weak	Weak	Suspect[620,641];	TRUE_BIOLOGICAL	4895	1	Solanum pennellii chromosome ch12, complete genome	2.340093604
CLCdnRY12_75269	1	1	623	639	uv|DQ317695.1:1340-3572	223	207	Weak	Weak	None	TRUE_BIOLOGICAL	620	1	Solanum pennellii chromosome ch09, complete genome	2.503912363
CLCdnRY7_35590	1	1	599	616	uv|U46493.1:1812-1938	2	19	Weak	Weak	Suspect[617,638];	TRUE_BIOLOGICAL	151341	1	Solanum lycopersicum cultivar I-3 chromosome 1	2.664576803
VdnRY5_32454	1	1	12	29	uv|JN581374.1:616-2149	1424	1441	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum splicing factor 3B subunit 3-like (LOC102606375), mRNA	2.664576803
SdnRY1_42272	1	1	615	630	uv|KC702202.1:1-1020	268	253	Weak	Weak	Suspect[631,638];	TRUE_BIOLOGICAL	196118	1	TPA_inf: Solanum tuberosum SINE SolS-Ia_St1	2.351097179
SdnRY1_42302	1	1	616	631	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[632,637];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102605888), mRNA	2.354788069
CLCdnRY1_35828	1	1	597	616	uv|M15423.1:212-306	78	59	Moderate	Moderate	Suspect[617,636];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum pennellii telomere repeat-binding protein 5-like (LOC107023878), transcript variant X5, mRNA	2.987421384
CLCdnRY7_550	1	1	610	627	uv|KC702226.1:1-538	372	389	Weak	Weak	Suspect[628,636];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum calcineurin B-like protein 3 (LOC102604164), transcript variant X2, mRNA	2.672955975
VdnRY1_139470	1	1	18	34	uv|JN581374.1:616-2149	1319	1335	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	4930	1	Solanum tuberosum chromosome 2 mitochondrion, complete sequence	2.51572327
SdnRY1_42421	1	1	149	201	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	8.201892744
SdnRY1_42461	1	1	148	200	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	8.214849921
SdnRY1_42462	1	1	148	200	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	8.214849921
CLCdnRY2_41819	1	1	597	612	uv|M34298.1:3143-4604	940	955	Weak	Weak	Suspect[613,633];	TRUE_BIOLOGICAL	6237	1	Solanum pennellii chromosome ch02, complete genome	2.369668246
CLCdnRY10_5786	1	1	17	32	uv|EF216318.1:622-720	40	25	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum endoglucanase 6-like (LOC102589512), mRNA	2.369668246
CLCdnRY12_67543	1	1	616	631	uv|J02459.1:1-48502-49	40697	40682	Weak	Weak	Suspect[632,633];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585584 (LOC102585584), ncRNA	2.369668246
SdnRY1_42538	1	1	6	22	uv|KC702222.1:1-1033	762	746	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	33958	1	PREDICTED: Solanum tuberosum UPF0481 protein At3g47200-like (LOC102582582), mRNA	2.53164557
SdnRY1_42540	1	1	24	39	uv|NGB00984.1:721-816	42	27	Weak	Weak	Suspect[1,23];	NO_DATA	1	1		2.373417722
CLCdnRY12_10339	1	1	594	609	uv|KC702194.1:1-1023	395	410	Weak	Weak	Suspect[610,632];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602405 (LOC102602405), mRNA	2.373417722
CLCdnRY12_10339	1	1	592	607	uv|AF129072.1:907-3477	2109	2094	None	Weak	Suspect[610,632];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602405 (LOC102602405), mRNA	2.373417722
CLCdnRY2_2146	1	1	612	627	uv|KM407506.1:2354-4632	1736	1721	Weak	Weak	Suspect[628,632];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604838 (LOC102604838), mRNA	2.373417722
CLCdnRY7_2271	1	1	6	21	uv|KM407506.1:2354-4632	1721	1736	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604838 (LOC102604838), mRNA	2.373417722
CLCdnRY7_10815	1	1	14	29	uv|L08862.1:1-2039	62	47	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum 60S ribosomal protein L9-1 (LOC102585829), mRNA	2.373417722
CLCdnRY7_39005	1	1	606	621	uv|AF234290.1:3149-3247	33	48	Weak	Weak	Suspect[622,632];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102595883 (LOC102595883), transcript variant X1, mRNA	2.373417722
SdnRY1_42537	1	1	9	24	uv|JN874480.1:6795-9434	2264	2279	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	40674	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602423 (LOC102602423), transcript variant X2, mRNA	2.373417722
VdnRY1_139471	1	1	18	34	uv|JN581374.1:616-2149	1319	1335	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	4930	1	Solanum tuberosum chromosome 2 mitochondrion, complete sequence	2.535657686
CLCdnRY12_53125	1	1	595	613	uv|GU827641.1:1944-2103	75	93	Moderate	Moderate	Suspect[614,630];	NO_DATA	1	1	PREDICTED: Solanum tuberosum mental retardation GTPase activating protein homolog 3-like (LOC102605922), mRNA	2.857142857
CLCdnRY12_53125	1	1	592	608	uv|GU827641.1:1944-2103	78	94	Weak	Moderate	Suspect[614,630];	NO_DATA	1	1	PREDICTED: Solanum tuberosum mental retardation GTPase activating protein homolog 3-like (LOC102605922), mRNA	2.53968254
CLCdnRY11_67430	1	1	9	24	uv|GU593055.1:13024-13902-49	710	725	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	2132	1	PREDICTED: Solanum tuberosum pathogenesis-related protein STH-2-like (LOC102586800), mRNA	2.380952381
CLCdnRY2_33866	1	1	599	616	uv|U46493.1:1812-1938	2	19	Weak	Weak	Suspect[617,629];	TRUE_BIOLOGICAL	151341	1	Solanum lycopersicum cultivar I-3 chromosome 1	2.702702703
CLCdnRY4_18878	1	1	610	626	uv|JQ895026.1:1-2192	2175	2159	Weak	Weak	Suspect[627,629];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein ELC-like (LOC102588962), transcript variant X2, misc_RNA	2.543720191
CLCdnRY5_14369	1	1	19	35	uv|NGB00026.1:1029-1408	214	230	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	PREDICTED: Solanum tuberosum alpha-glucosidase-like (LOC102581005), mRNA	2.543720191
CLCdnRY11_19918	1	1	25	40	uv|JX560397.1:83-5970	3763	3778	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum lycopersicum probable glycosyltransferase At5g11130 (LOC101257920), mRNA	2.384737679
CLCdnRY11_19918	1	1	29	44	uv|KM407512.1:886-4985	1641	1656	None	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum probable glycosyltransferase At5g11130 (LOC101257920), mRNA	2.384737679
SdnRY1_42671	1	1	143	195	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	8.280254777
CLCdnRY9_65117	1	1	599	615	uv|U13843.1:1887-9923	798	814	Weak	Weak	Suspect[616,628];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum agamous-like MADS-box protein AGL62 (LOC107058109), mRNA	2.547770701
CLCdnRY10_969	1	1	597	612	uv|U02450.1:497-595	36	21	Weak	Weak	Suspect[613,628];	TRUE_BIOLOGICAL	558016	1	Solanum tuberosum clone StDT94 non-specific lipid transfer protein 2 mRNA, complete cds	2.388535032
CLCdnRY10_49604	1	1	609	624	uv|AF379854.1:4263-5841	464	449	Weak	Weak	Suspect[625,628];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589677 (LOC102589677), transcript variant X3, mRNA	2.388535032
CLCdnRY4_47924	1	1	6	21	uv|EU048865.1:1773-1899	66	51	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum CSC1-like protein At4g35870 (LOC102603906), mRNA	2.388535032
CLCdnRY10_48730	1	1	6	21	uv|EU048865.1:1773-1899	66	51	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum CSC1-like protein At4g35870 (LOC102603906), mRNA	2.392344498
SdnRY1_42744	1	1	18	33	uv|LC029925.1:2825-3869	930	915	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum BTB/POZ and TAZ domain-containing protein 1-like (LOC102583194), mRNA	2.392344498
SdnRY1_42776	1	1	141	193	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	8.306709265
CLCdnRY11_35149	1	1	605	621	uv|U89961.1:1-4240	2329	2345	Weak	Weak	Suspect[622,626];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum pyridoxal reductase, chloroplastic (LOC101244752), transcript variant X2, mRNA	2.555910543
SdnRY1_42803	1	1	597	613	uv|L05669.1:1-1770	1384	1400	Weak	Weak	Suspect[614,626];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum MADS-box protein SOC1-like (LOC102592177), transcript variant X2, mRNA	2.555910543
CLCdnRY10_7986	1	1	14	29	uv|U14124.1:1-466	211	196	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598163 (LOC102598163), mRNA	2.396166134
SdnRY1_42828	1	1	140	192	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	8.32
SdnRY1_42829	1	1	140	192	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	8.32
CLCdnRY4_9124	1	1	14	29	uv|U14124.1:1-466	211	196	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598163 (LOC102598163), mRNA	2.403846154
CLCdnRY3_52457	1	1	4	19	uv|M88476.1:1-88	6	21	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum HVA22-like protein e (LOC102595872), transcript variant X2, mRNA	2.407704655
CLCdnRY7_7933	1	1	23	38	uv|AY568055.1:6692-7837	334	319	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative disease resistance protein RGA4 (LOC102586047), mRNA	2.407704655
CLCdnRY9_6565	1	1	604	619	uv|JN874480.1:1050-2714	944	929	Weak	Weak	Suspect[620,623];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum 50S ribosomal protein L4, chloroplastic (LOC102596426), transcript variant X2, mRNA	2.407704655
VdnRY3_6414	1	1	1	16	uv|U13864.1:2748-4229-44	886	871	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum 18.1 kDa class I heat shock protein-like (LOC102601300), mRNA	2.407704655
CLCdnRY8_41170	1	1	587	603	uv|KC702183.1:1-1023	858	874	Weak	Weak	Suspect[604,621];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii UDP-glycosyltransferase 86A1-like (LOC107029738), mRNA	2.576489533
CLCdnRY4_5643	1	1	17	32	uv|EF216318.1:622-720	40	25	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum endoglucanase 6-like (LOC102589512), mRNA	2.419354839
CLCdnRY11_60045	1	1	24	39	uv|NGB00402.1:2108-3532	122	137	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589679 (LOC102589679), mRNA	2.423263328
CLCdnRY4_39116	1	1	12	27	uv|KM062046.1:2926-3220	116	131	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum replication protein A 70 kDa DNA-binding subunit B-like (LOC102578577), transcript variant X18, mRNA	2.423263328
CLCdnRY5_27215	1	1	2	17	uv|KF853601.1:1021-3588	134	149	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum DNA-directed RNA polymerase III subunit RPC4-like (LOC102597569), transcript variant X2, mRNA	2.423263328
CLCdnRY1_6464	1	1	10	25	uv|KC702209.1:1-2022	155	170	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	196118	1	Solanum tuberosum clone StDT149 inducible plastid-lipid associated protein mRNA, complete cds	2.431118314
SdnRY1_43251	1	1	14	32	uv|U02436.1:3152-4436	614	632	Moderate	Moderate	Suspect[1,13];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch05, complete genome	2.922077922
CLCdnRY10_70389	1	1	588	604	uv|U02452.1:1-991	160	176	Weak	Weak	Suspect[605,616];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum F-box/kelch-repeat protein At3g23880-like (LOC107059204), mRNA	2.597402597
SdnRY1_43254	1	1	14	30	uv|U13843.1:1887-9923	814	798	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum agamous-like MADS-box protein AGL62 (LOC107058109), mRNA	2.597402597
CLCdnRY12_63782	1	1	7	24	uv|KP057689.1:1-859	353	336	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	84111	1	PREDICTED: Solanum tuberosum origin of replication complex subunit 1A-like (LOC102601110), mRNA	2.768729642
CLCdnRY11_88569	1	1	22	37	uv|JQ437370.1:1-703	276	291	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pleiotropic drug resistance protein 1-like (PDR4), transcript variant X2, mRNA	2.442996743
CLCdnRY10_48864	1	1	24	40	uv|L08860.1:1858-2910-49	1046	1030	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	1279	1		2.614379085
CLCdnRY1_22165	1	1	5	21	uv|U02436.1:1330-2607	463	447	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4930	1	Actinomyces naeslundii DNA, complete genome	2.618657938
VdnRY3_22617	1	1	19	35	uv|U89960.1:4738-7717	2251	2267	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum clathrin light chain 2-like (LOC102585812), mRNA	2.618657938
SdnRY1_43441	1	1	572	587	uv|KC702198.1:1-1023	734	749	Weak	Weak	Suspect[588,611];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592462 (LOC102592462), transcript variant X2, mRNA	2.454991817
CLCdnRY1_7866	1	1	581	596	uv|U75992.1:16925-19409	1106	1121	Weak	Weak	Suspect[597,611];	TRUE_BIOLOGICAL	10375	1	PREDICTED: Solanum tuberosum glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like (LOC102603620), transcript variant X2, mRNA	2.454991817
CLCdnRY2_44817	1	1	580	596	uv|U02452.1:1-991	847	863	Weak	Weak	Suspect[597,610];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060813 (LOC107060813), mRNA	2.62295082
CLCdnRY10_6828	1	1	587	602	uv|KC503965.1:3195-3771-42	131	116	Weak	Weak	Suspect[603,610];	TRUE_BIOLOGICAL	1224	1	PREDICTED: Solanum pennellii 60S ribosomal protein L28-1-like (LOC107015217), mRNA	2.459016393
VdnRY3_69871	1	1	5	20	uv|U55760.1:1-2749	2087	2072	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase ATL23 (LOC102579819), mRNA	2.459016393
CLCdnRY12_76378	1	1	575	590	uv|X13003.1:2753-4028	134	119	Weak	Weak	Suspect[591,610];	TRUE_BIOLOGICAL	561	1	Solanum lycopersicum cultivar I-3 chromosome 4	2.459016393
CLCdnRY8_362	1	1	16	34	uv|J02459.1:1-48502-49	37725	37743	Moderate	Moderate	Suspect[1,15];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum zinc finger A20 and AN1 domain-containing stress-associated protein 5-like (LOC102605848), mRNA	2.955665025
SdnRY1_43552	1	1	21	36	uv|KF719005.1:2205-5132	1303	1318	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch09, complete genome	2.463054187
VdnRY6_10142	1	1	19	34	uv|KC702234.1:1-1022	350	365	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum calmodulin-like protein 8 (LOC102584290), mRNA	2.463054187
CLCdnRY10_13575	1	1	21	37	uv|U02436.1:1330-2607	463	447	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	4930	1	Corynebacterium segmentosum strain NCTC934 genome assembly, chromosome: 1	2.631578947
CLCdnRY11_234	1	1	574	589	uv|J02459.1:1-48502-49	31181	31196	Weak	Weak	Suspect[590,608];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102604320), mRNA	2.467105263
SdnRY1_43593	1	1	18	33	uv|M28829.1:1-8684-49	641	656	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589677 (LOC102589677), transcript variant X1, mRNA	2.471169687
VdnRY3_3896	1	1	571	587	uv|KC702201.1:1-1023	289	305	Weak	Weak	Suspect[588,606];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch09, complete genome	2.640264026
CLCdnRY1_51205	1	1	589	605	uv|KC702165.1:1-1023	143	159	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	Solanum tuberosum anthocyanidin synthase (ANS), mRNA<>Solanum tuberosum anthocyanidin synthase (ans) mRNA, complete cds	2.644628099
CLCdnRY12_65298	1	1	3	18	uv|KY031726.1:1-7905	2676	2661	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum F-box protein At1g78100 (LOC102601177), transcript variant X2, mRNA	2.479338843
VdnRY5_4129	1	1	24	39	uv|JX560321.2:370-1372	247	232	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum tyramine N-feruloyltransferase 4/11-like (LOC102578749), mRNA	2.479338843
CLCdnRY3_36651	1	1	19	35	uv|JN204883.1:1-1492	539	523	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein cornichon homolog 4-like (LOC102579679), transcript variant X1, mRNA	2.649006623
CLCdnRY12_82039	1	1	577	593	uv|U29899.1:4697-5948	36	52	Weak	Weak	Suspect[594,604];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized protein At1g04910-like (LOC102600825), mRNA	2.649006623
CLCdnRY1_27654	1	1	15	30	uv|V00604.2:1-6407-49	706	721	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g20540-like (LOC102581947), mRNA	2.483443709
VdnRY5_2253	1	1	9	24	uv|M29362.1:336-523	113	128	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum pennellii tubby-like F-box protein 5 (LOC107015146), mRNA	2.483443709
CLCdnRY12_45736	1	1	19	34	uv|DQ092493.1:5324-5419	15	30	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum putative disease resistance RPP13-like protein 1 (LOC107062303), mRNA	2.495840266
CLCdnRY7_15135	1	1	2	17	uv|KY031733.1:1-4952	4610	4595	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum bifunctional epoxide hydrolase 2-like (LOC102602039), mRNA	2.495840266
CLCdnRY11_35457	1	1	18	33	uv|EU546819.1:3339-3603	264	249	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	Solanum pennellii chromosome ch06, complete genome	2.5
CLCdnRY5_3926	1	1	570	585	uv|KP126802.1:8623-13621-38	2571	2586	Weak	Weak	Suspect[586,600];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum CBL-interacting protein kinase 2-like (LOC102579183), mRNA	2.5
SdnRY1_43939	1	1	114	166	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	8.681135225
CLCdnRY2_21396	1	1	25	42	uv|KC702194.1:1-1023	478	461	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum eukaryotic translation initiation factor 5-like (LOC102587245), mRNA	2.838063439
CLCdnRY3_4200	1	1	559	575	uv|EU496089.1:1713-1960	59	75	Weak	Weak	Suspect[576,599];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598965 (LOC102598965), mRNA	2.671118531
CLCdnRY12_23360	1	1	584	599	uv|J02459.1:1-48502-49	23790	23775	Weak	Weak	None	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596616 (LOC102596616), transcript variant X1, mRNA	2.504173623
VdnRY1_42904	1	1	562	577	uv|JQ927446.1:4885-6835-49	1659	1674	Weak	Weak	Suspect[578,599];	NO_DATA	1	1	PREDICTED: Solanum tuberosum reticulon-4-interacting protein 1, mitochondrial (LOC102581800), mRNA	2.504173623
VdnRY4_28739	1	1	560	575	uv|AF379854.1:4263-5841	347	332	Weak	Weak	Suspect[576,599];	TRUE_BIOLOGICAL	5820	1	Solanum pennellii chromosome ch06, complete genome	2.504173623
CLCdnRY10_39533	1	1	583	598	uv|JF909482.1:3850-8059	3796	3781	Weak	Weak	None	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum zinc-finger homeodomain protein 9-like (LOC102602352), mRNA	2.508361204
CLCdnRY10_2806	1	1	583	598	uv|KC702237.1:1-1024	263	248	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii peroxiredoxin-2B (LOC107026200), mRNA	2.508361204
CLCdnRY4_2946	1	1	582	597	uv|KC702237.1:1-1024	263	248	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii peroxiredoxin-2B (LOC107026200), mRNA	2.512562814
PBdnRY1_10343	1	1	9	24	uv|KF719009.1:2599-3800	264	249	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	1799696	1	PREDICTED: Solanum tuberosum uncharacterized LOC102591569 (LOC102591569), mRNA	2.512562814
VdnRY6_1886	1	1	23	38	uv|AY962893.1:8266-9065	728	713	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum tuberosum uncharacterized LOC107063177 (LOC107063177), mRNA	2.512562814
VdnRY6_2487	1	1	575	590	uv|NGB00051.1:1428-2848	1290	1305	Weak	Weak	Suspect[591,597];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein yippee-like At4g27745 (LOC102578552), transcript variant X2, mRNA	2.512562814
CLCdnRY3_67292	1	1	567	582	uv|KC702234.1:1-1022	537	552	Weak	Weak	Suspect[583,596];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 73C1-like (LOC102592932), mRNA	2.516778523
CLCdnRY6_244	1	1	574	589	uv|J02459.1:1-48502-49	31181	31196	Weak	Weak	Suspect[590,596];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102604320), mRNA	2.516778523
CLCdnRY7_4670	1	1	1	18	uv|NGB00051.1:1428-2848	1291	1308	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum acetyl-CoA-benzylalcohol acetyltransferase-like (LOC102595175), mRNA	2.857142857
SdnRY1_44180	1	1	557	572	uv|NGB00055.1:1-1950	1275	1260	Weak	Weak	Suspect[573,594];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum probable plastid-lipid-associated protein 13, chloroplastic (LOC102596905), mRNA	2.525252525
VdnRY7_10755	1	1	9	31	uv|U55760.1:1-2749	2093	2072	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum zinc-finger homeodomain protein 9-like (LOC102603647), mRNA	3.70994941
CLCdnRY2_14785	1	1	8	23	uv|GU827641.1:1208-1476	113	98	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum peroxidase 12-like (LOC102586327), mRNA	2.529510961
SdnRY1_44335	1	1	562	577	uv|M16192.1:1-2517-49	1063	1048	Weak	Weak	Suspect[578,591];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch09, complete genome	2.538071066
CLCdnRY10_9802	1	1	1	38	uv|KF719004.1:2204-2946	110	73	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Nicotiana tabacum ribulose bisphosphate carboxylase small chain, chloroplastic (LOC107802883), mRNA	6.271186441
CLCdnRY7_19023	1	1	24	39	uv|KF680544.1:323-942	456	441	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum RPM1-interacting protein 4 (LOC102601187), mRNA	2.542372881
SdnRY1_44397	1	1	6	28	uv|EF036511.1:5045-5180-47	24	2	Moderate	Moderate	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102605321 (LOC102605321), mRNA	3.735144312
CLCdnRY6_17962	1	1	567	582	uv|NGB00051.1:1428-2848	1304	1289	Weak	Weak	Suspect[583,589];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum premnaspirodiene oxygenase (LOC101256638), mRNA	2.546689304
SdnRY1_44419	1	1	553	568	uv|X70271.1:1034-1130	73	58	Weak	Weak	Suspect[569,589];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum chromosome ch10, complete genome	2.546689304
CLCdnRY4_9222	1	1	1	38	uv|KF719004.1:2204-2946	110	73	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Nicotiana tabacum ribulose bisphosphate carboxylase small chain, chloroplastic (LOC107802883), mRNA	6.292517007
SdnRY1_44479	1	1	9	25	uv|KC702182.1:1-1023	149	133	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum (3S,6E)-nerolidol synthase 1-like (LOC102592813), mRNA	2.721088435
CLCdnRY1_48137	1	1	554	569	uv|V00604.2:1-6407-49	2920	2905	Weak	Weak	Suspect[570,588];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 (LOC102594030), mRNA	2.551020408
CLCdnRY11_47443	1	1	5	20	uv|L09155.1:3742-3779-49	50	35	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum MLO-like protein 8 (LOC101264283), transcript variant X3, mRNA	2.551020408
CLCdnRY5_47691	1	1	5	20	uv|L09155.1:3742-3779-49	50	35	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum MLO-like protein 8 (LOC101264283), transcript variant X3, mRNA	2.551020408
VdnRY1_4238	1	1	572	587	uv|KJ541672.1:2690-2839	56	71	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586617 (LOC102586617), mRNA	2.555366269
CLCdnRY12_42916	1	1	550	565	uv|AF379854.1:3-2710	1061	1076	Weak	Weak	Suspect[566,585];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580706 (LOC102580706), transcript variant X1, ncRNA	2.564102564
CLCdnRY11_9135	1	1	558	574	uv|U89961.1:1-4240	1830	1846	Weak	Weak	Suspect[575,584];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum tyramine N-feruloyltransferase 4/11-like (LOC102578408), mRNA	2.739726027
CLCdnRY12_40011	1	1	560	576	uv|KC702209.1:1-2022	1283	1299	Weak	Weak	Suspect[577,584];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum aminoacylase-1 (LOC102590216), transcript variant X1, mRNA	2.739726027
CLCdnRY2_10863	1	1	12	27	uv|L24367.1:218-930	97	112	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	1707	1	PREDICTED: Solanum tuberosum soluble inorganic pyrophosphatase 1 (LOC102585875), mRNA	2.568493151
CLCdnRY6_12983	1	1	566	582	uv|DQ391279.1:1-10285	1965	1949	Weak	Weak	None	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum peptidyl-prolyl cis-trans isomerase CYP19-3-like (LOC102605090), mRNA	2.749140893
VdnRY5_6100	1	1	556	571	uv|KC702185.1:1-522	144	159	Weak	Weak	Suspect[572,582];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102601293 (LOC102601293), mRNA	2.577319588
CLCdnRY10_14291	1	1	14	29	uv|NGB00055.1:1-1950	1445	1430	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum uncharacterized LOC102606345 (LOC102606345), mRNA	2.581755594
VdnRY1_76022	1	1	9	24	uv|KY031733.1:1-4952	4677	4692	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum disease resistance protein At4g27190-like (LOC102596811), mRNA	2.581755594
SdnRY1_44832	1	1	2	19	uv|M34298.1:3143-4604	1111	1094	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum mitogen-activated protein kinase kinase kinase 2-like (LOC107061590), mRNA	2.931034483
VdnRY4_16102	1	1	4	20	uv|U03498.1:4566-4750	4	20	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102598575), transcript variant X3, mRNA	2.75862069
CLCdnRY10_4113	1	1	541	556	uv|U89936.1:1117-1464	148	133	Weak	Weak	Suspect[557,580];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 5	2.586206897
SdnRY1_44837	1	1	559	574	uv|JF909467.1:4676-4959	135	150	Weak	Weak	Suspect[575,580];	NO_DATA	1	1	PREDICTED: Solanum tuberosum TMV resistance protein N-like (LOC102594024), mRNA	2.586206897
CLCdnRY7_46835	1	1	551	566	uv|J02459.1:1-48502-49	39895	39910	Weak	Weak	Suspect[567,580];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum glutaredoxin-C9 (LOC102595060), mRNA	2.586206897
CLCdnRY9_55609	1	1	551	566	uv|J02459.1:1-48502-49	39895	39910	Weak	Weak	Suspect[567,580];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum glutaredoxin-C9 (LOC102595060), mRNA	2.586206897
SdnRY1_44867	1	1	24	39	uv|AF379854.1:3-2710	1681	1666	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cysteine-rich repeat secretory protein 38-like (LOC102585164), transcript variant X2, mRNA	2.590673575
SdnRY1_44877	1	1	10	25	uv|KC702187.1:1-1023	684	699	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 1	2.590673575
CLCdnRY11_57468	1	1	553	570	uv|J02482.1:1-5386-49	1762	1745	Weak	Weak	Suspect[571,578];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum alpha-dioxygenase 1-like (LOC102583777), mRNA	2.941176471
CLCdnRY9_14001	1	1	12	27	uv|DQ058733.1:11-150	51	36	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable protein arginine N-methyltransferase 1 (LOC102585349), transcript variant X2, mRNA	2.595155709
CLCdnRY12_59537	1	1	21	36	uv|U02436.1:3152-4436	1162	1177	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum pennellii uncharacterized LOC107014413 (LOC107014413), mRNA	2.59965338
CLCdnRY10_13407	1	1	551	566	uv|KC702178.1:1-2022	131	116	Weak	Weak	Suspect[567,577];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum lycopersicum acylamino-acid-releasing enzyme-like (LOC101264860), transcript variant X5, mRNA	2.59965338
SdnRY1_44948	1	1	13	28	uv|M77169.1:820-5161	3969	3984	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum secoisolariciresinol dehydrogenase-like (LOC102579919), mRNA	2.59965338
VdnRY3_78533	1	1	5	20	uv|AY093584.1:3788-6062	232	247	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum tuberosum anamorsin homolog (LOC102592402), transcript variant X2, mRNA	2.59965338
VdnRY3_78534	1	1	5	20	uv|AY093584.1:3788-6062	232	247	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum tuberosum anamorsin homolog (LOC102592402), transcript variant X2, mRNA	2.59965338
CLCdnRY9_74223	1	1	549	565	uv|U29899.1:4697-5948	36	52	Weak	Weak	Suspect[566,576];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized protein At1g04910-like (LOC102600825), mRNA	2.777777778
CLCdnRY7_23774	1	1	558	573	uv|V00604.2:1-6407-49	4153	4168	Weak	Weak	Suspect[574,576];	TRUE_BIOLOGICAL	10861	1	Cinnamomum camphora NADH dehydrogenase subunit 2 (Nad2) mRNA, complete cds; mitochondrial	2.604166667
SdnRY1_45044	1	1	13	28	uv|J02459.1:1-48502-49	46851	46836	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch12, complete genome	2.608695652
CLCdnRY11_57966	1	1	559	574	uv|NGB00055.1:4046-4803	617	602	Weak	Weak	Suspect[575,575];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum auxin response factor 3-like (LOC102582172), transcript variant X3, mRNA	2.608695652
CLCdnRY3_38168	1	1	12	27	uv|KM407503.1:1118-1278	79	94	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum homeobox-leucine zipper protein HAT22-like (LOC102594542), mRNA	2.613240418
CLCdnRY3_7456	1	1	538	556	uv|JQ927446.1:4885-6835-49	684	702	Moderate	Moderate	Suspect[557,573];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602405 (LOC102602405), mRNA	3.141361257
CLCdnRY12_61117	1	1	544	560	uv|KC702165.1:1-1023	924	908	Weak	Weak	Suspect[561,573];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579903 (LOC102579903), transcript variant X8, ncRNA	2.792321117
VdnRY2_1338	1	1	245	297	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Nicotiana tabacum ribulose bisphosphate carboxylase small chain, chloroplastic-like (LOC107771723), mRNA	9.090909091
VdnRY6_10497	1	1	555	571	uv|L08862.1:1-2039	1079	1063	Weak	Weak	Suspect[572,572];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum histone H2AX-like (LOC102587542), mRNA	2.797202797
CLCdnRY11_7458	1	1	556	572	uv|U55760.1:1-2749	2071	2087	Weak	Weak	None	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum heat stress transcription factor B-2a-like (LOC102597973), mRNA	2.797202797
VdnRY7_2116	1	1	327	367	uv|KF719004.1:2204-2946	73	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	7.01754386
CLCdnRY10_2154	1	1	10	28	uv|KC702222.1:1-1033	745	763	Moderate	Moderate	Suspect[1,9];	TRUE_BIOLOGICAL	33958	1	PREDICTED: Solanum tuberosum 50S ribosomal protein L34, chloroplastic (LOC102588229), transcript variant X1, mRNA	3.157894737
CLCdnRY3_66326	1	1	545	560	uv|KF719005.1:2205-5132	2700	2685	Weak	Weak	Suspect[561,570];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum (E,E)-germacrene B synthase-like (LOC102582072), mRNA	2.631578947
SdnRY1_45272	1	1	15	30	uv|U13843.1:1887-9923	3033	3048	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum TMV resistance protein N-like (LOC107062366), mRNA	2.631578947
VdnRY3_1755	1	1	540	555	uv|KC702198.1:1-1023	335	320	Weak	Weak	Suspect[556,570];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583345 (LOC102583345), mRNA	2.631578947
VdnRY7_2117	1	1	327	367	uv|KF719004.1:2204-2946	73	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	7.029876977
VdnRY2_1896	1	1	13	29	uv|JQ437370.1:1-703	177	161	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum auxin-induced protein PCNT115-like (LOC102605459), transcript variant X2, mRNA	2.811950791
SdnRY1_45319	1	1	539	554	uv|U66885.1:3752-3849	41	26	Weak	Weak	Suspect[555,569];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102594324 (LOC102594324), ncRNA	2.636203866
VdnRY7_22311	1	1	543	558	uv|KF719005.1:2205-5132	2615	2600	Weak	Weak	Suspect[559,569];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590908 (LOC102590908), transcript variant X3, misc_RNA	2.636203866
CLCdnRY12_60702	1	1	12	27	uv|L08860.1:1858-2910-49	1016	1001	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum vacuolar protein sorting-associated protein VTA1 homolog (LOC107061416), mRNA	2.64084507
CLCdnRY8_14476	1	1	12	27	uv|KU936036.1:2396-3564	784	769	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 67 (LOC102606216), transcript variant X2, mRNA	2.64084507
VdnRY5_36046	1	1	23	38	uv|JF909481.1:3855-5640	1105	1090	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum histone H3.3 (LOC102587619), mRNA	2.64084507
PBdnRY1_12511	1	1	5	20	uv|U13843.1:1887-9923	1793	1778	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum 40S ribosomal protein S25 (LOC102584409), mRNA	2.645502646
CLCdnRY12_82401	1	1	5	20	uv|U89961.1:1-4240	988	1003	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g27270 (LOC102580066), transcript variant X2, mRNA	2.645502646
VdnRY5_15863	1	1	24	39	uv|KC702209.1:1-2022	1504	1489	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum ATP-citrate synthase alpha chain protein 2-like (LOC102585745), mRNA	2.645502646
CLCdnRY12_29137	1	1	5	20	uv|V00604.2:1-6407-49	146	161	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599063 (LOC102599063), mRNA	2.654867257
CLCdnRY12_17683	1	1	547	562	uv|JX560397.1:83-5970	571	556	Weak	Weak	Suspect[563,564];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum pennellii ethylene-responsive transcription factor ERF061 (LOC107026860), mRNA	2.659574468
SdnRY1_45528	1	1	534	549	uv|KC702209.1:1-2022	150	165	Weak	Weak	Suspect[550,564];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum transcription repressor OFP6 (LOC107057995), mRNA	2.659574468
CLCdnRY12_29085	1	1	22	38	uv|JQ394800.1:4781-4893	63	79	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum pennellii uncharacterized LOC107017643 (LOC107017643), transcript variant X2, mRNA	2.841918295
CLCdnRY10_13776	1	1	544	559	uv|U13843.1:1887-9923	4630	4645	Weak	Weak	Suspect[560,563];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum reactive oxygen species modulator 1-like (LOC102579057), mRNA	2.664298401
VdnRY5_20353	1	1	535	550	uv|J02459.1:1-48502-49	29928	29913	Weak	Weak	Suspect[551,563];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum homogentisate solanesyltransferase, chloroplastic (LOC102594989), mRNA	2.664298401
SdnRY1_45606	1	1	388	428	uv|KF719004.1:2204-2946	73	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	Solanum tuberosum ribulose bisphosphate carboxylase small chain C, chloroplastic-like (RBCS-C), mRNA<>Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds	7.117437722
VdnRY6_32576	1	1	545	561	uv|AF058756.1:2170-2888	226	210	Weak	Weak	Suspect[562,562];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum indole-3-acetic acid-amido synthetase GH3.6-like (LOC102584700), transcript variant X6, mRNA	2.846975089
CLCdnRY10_80128	1	1	2	17	uv|U75992.1:4807-5386	86	71	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	Solanum pennellii chromosome ch06, complete genome	2.669039146
CLCdnRY12_23717	1	1	547	562	uv|M77815.1:1530-1628	95	80	Weak	Weak	None	TRUE_BIOLOGICAL	10860	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600017 (LOC102600017), mRNA	2.669039146
CLCdnRY7_24911	1	1	531	546	uv|DQ391279.1:1-10285	4733	4718	Weak	Weak	Suspect[547,561];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598397 (LOC102598397), misc_RNA	2.673796791
CLCdnRY1_15694	1	1	2	19	uv|JQ927446.1:4885-6835-49	1529	1512	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	PREDICTED: Solanum tuberosum methyl-CpG-binding domain-containing protein 13 (LOC102605202), transcript variant X3, mRNA	3.035714286
SdnRY1_45696	1	1	6	22	uv|AB215109.1:1703-1800	74	58	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cytochrome P450 71A4-like (LOC102583405), mRNA	2.857142857
CLCdnRY6_15918	1	1	539	554	uv|M29363.1:3595-3692	28	43	Weak	Weak	Suspect[555,560];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587975 (LOC102587975), mRNA	2.678571429
CLCdnRY10_67694	1	1	540	557	uv|KC702165.1:1-1023	161	144	Weak	Weak	Suspect[558,559];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum stellacyanin-like (LOC102595852), mRNA	3.041144902
CLCdnRY10_30669	1	1	537	552	uv|AF379854.1:4263-5841	1184	1169	Weak	Weak	Suspect[553,559];	NO_DATA	1	1	PREDICTED: Solanum tuberosum auxin-induced protein 15A-like (LOC102590858), mRNA	2.683363148
CLCdnRY3_40383	1	1	18	35	uv|NGB00051.1:1428-2848	1306	1289	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum receptor-like protein kinase THESEUS 1 (LOC102593317), mRNA	3.046594982
CLCdnRY7_39882	1	1	522	538	uv|JN874480.1:1050-2714	922	938	Weak	Weak	Suspect[539,558];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum disease resistance protein RPP13-like (LOC102595605), mRNA	2.867383513
CLCdnRY3_40383	1	1	22	37	uv|KF718989.1:2199-3181	126	111	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum receptor-like protein kinase THESEUS 1 (LOC102593317), mRNA	2.688172043
CLCdnRY11_9206	1	1	11	26	uv|JF909482.1:3850-8059	4044	4059	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum pennellii uncharacterized LOC107027136 (LOC107027136), mRNA	2.692998205
VdnRY2_80818	1	1	538	553	uv|M34305.1:3197-4538	1135	1120	Weak	Weak	Suspect[554,557];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1B-12 (LOC102585344), transcript variant X16, mRNA	2.692998205
CLCdnRY11_55049	1	1	540	555	uv|M74750.1:2524-2620	48	63	Weak	Weak	Suspect[556,557];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584739 (LOC102584739), ncRNA	2.692998205
CLCdnRY2_5307	1	1	535	556	uv|KF853601.1:1021-3588	1885	1906	Weak	Weak	None	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum pennellii aquaporin PIP2-1-like (LOC107031663), mRNA	3.776978417
CLCdnRY10_66933	1	1	8	24	uv|JN874480.1:11708-20103	2798	2782	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	357	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase KEG (LOC102585596), mRNA	2.877697842
SdnRY1_45891	1	1	525	541	uv|NGB00055.1:4046-4803	509	493	Weak	Weak	Suspect[542,556];	TRUE_BIOLOGICAL	558016	1	Solanum pennellii chromosome ch07, complete genome	2.877697842
SdnRY1_45867	1	1	530	545	uv|V00604.2:1-6407-49	3103	3118	Weak	Weak	Suspect[546,556];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600019 (LOC102600019), mRNA	2.697841727
SdnRY1_45912	1	1	16	31	uv|U89932.1:553-1856	903	888	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062985 (LOC107062985), mRNA	2.697841727
CLCdnRY2_5307	1	1	534	549	uv|EF456735.1:7106-7196	68	83	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum pennellii aquaporin PIP2-1-like (LOC107031663), mRNA	2.697841727
CLCdnRY9_36872	1	1	517	532	uv|DQ391279.1:1-10285	463	478	Weak	Weak	Suspect[533,556];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 87A1-like (LOC102599069), mRNA	2.697841727
VdnRY6_10308	1	1	532	547	uv|J02459.1:1-48502-49	16121	16106	Weak	Weak	Suspect[548,556];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum deSI-like protein At4g17486 (LOC102597047), transcript variant X3, mRNA	2.697841727
VdnRY1_44082	1	1	520	535	uv|U02436.1:3152-4436	436	421	Weak	Weak	Suspect[536,555];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum coatomer subunit beta'-1-like (LOC102603830), transcript variant X3, mRNA	2.702702703
VdnRY6_1948	1	1	523	538	uv|KF718979.1:2206-6730	2480	2495	Weak	Weak	Suspect[539,555];	TRUE_BIOLOGICAL	3701	1	Lycopersicon esculentum p69d gene	2.702702703
CLCdnRY3_12744	1	1	531	552	uv|KF719005.1:2205-5132	1152	1173	Weak	Weak	Suspect[553,554];	TRUE_BIOLOGICAL	3701	1	Solanum chacoense rapid alkalinization factor 5 (RALF5) mRNA, complete cds	3.790613718
CLCdnRY3_64971	1	1	537	552	uv|LC121520.1:4008-4664	245	230	Weak	Weak	Suspect[553,553];	TRUE_BIOLOGICAL	1279	1		2.712477396
CLCdnRY6_74991	1	1	22	37	uv|KM407505.1:939-2365	357	372	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum auxin-responsive protein SAUR68-like (LOC102591746), mRNA	2.712477396
CLCdnRY11_3842	1	1	527	542	uv|FJ931533.1:7978-12753-49	1567	1552	Weak	Weak	Suspect[543,552];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum feruloyl CoA ortho-hydroxylase 2-like (LOC102589939), mRNA	2.717391304
CLCdnRY12_33007	1	1	13	28	uv|KY031725.1:1-5101	1004	1019	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum dephospho-CoA kinase-like (LOC102586462), transcript variant X5, mRNA	2.717391304
CLCdnRY12_73538	1	1	22	37	uv|KM407505.1:939-2365	357	372	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum auxin-responsive protein SAUR68-like (LOC102591746), mRNA	2.717391304
SdnRY1_46053	1	1	523	538	uv|Z32692.1:2323-5137	2180	2165	Weak	Weak	Suspect[539,552];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum calcineurin B-like protein 10 (LOC102595606), mRNA	2.717391304
VdnRY7_2118	1	1	503	543	uv|KF719004.1:2204-2946	73	113	Strong	Strong	Suspect[544,551];	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	7.259528131
VdnRY7_2118	1	1	327	367	uv|KF719004.1:2204-2946	73	113	Moderate	Strong	Suspect[544,551];	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	7.259528131
CLCdnRY8_25258	1	1	9	30	uv|U19585.1:163-464	103	124	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable inactive serine/threonine-protein kinase scy1 (LOC102584596), mRNA	3.811252269
CLCdnRY7_13449	1	1	3	21	uv|AY390769.1:1-1000	59	77	Moderate	Moderate	Suspect[1,2];	NO_DATA	1	1	Solanum tuberosum glucan endo-1,3-beta-glucosidase 13-like (LOC102587248), mRNA<>Solanum tuberosum beta-1,3-glucanase 23 (B13G_23) mRNA, complete cds	3.266787659
CLCdnRY12_60620	1	1	523	538	uv|AF379854.1:4263-5841	362	377	Weak	Weak	Suspect[539,551];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum pennellii RNA-binding protein 12-like (LOC107028982), mRNA	2.722323049
CLCdnRY5_3739	1	1	526	541	uv|FJ931533.1:7978-12753-49	1567	1552	Weak	Weak	Suspect[542,551];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum feruloyl CoA ortho-hydroxylase 2-like (LOC102589939), mRNA	2.722323049
CLCdnRY6_33722	1	1	25	40	uv|KC702208.1:1-1350	361	346	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At1g10910, chloroplastic (LOC102584578), transcript variant X4, misc_RNA	2.722323049
VdnRY3_80754	1	1	2	18	uv|M34305.1:3197-4538	1294	1278	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum pollen-specific leucine-rich repeat extensin-like protein 1 (LOC107060823), mRNA	2.909090909
CLCdnRY1_44536	1	1	511	526	uv|JQ927446.1:863-2607	200	185	Weak	Weak	Suspect[527,550];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At1g73710 (LOC102579894), transcript variant X3, mRNA	2.727272727
CLCdnRY2_32967	1	1	4	19	uv|X53127.1:443-904	406	421	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial (LOC102604609), transcript variant X3, misc_RNA	2.727272727
CLCdnRY8_47327	1	1	511	526	uv|JQ927446.1:863-2607	200	185	Weak	Weak	Suspect[527,550];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At1g73710 (LOC102579894), transcript variant X3, mRNA	2.727272727
SdnRY1_46245	1	1	116	549	uv|HQ245711.1:5539-7450	1288	855	Strong	Strong	None	NO_DATA	1	1	Binary vector pKM24KHibm10, complete sequence	78.87067395
SdnRY1_46245	1	1	1	110	uv|U09365.1:5556-6239	259	150	Strong	Strong	None	NO_DATA	1	1	Binary vector pKM24KHibm10, complete sequence	19.85428051
SdnRY1_46245	1	1	111	164	uv|AF327720.1:11244-11299-2	54	1	Strong	Strong	None	NO_DATA	1	1	Binary vector pKM24KHibm10, complete sequence	9.653916211
SdnRY1_46245	1	1	62	112	uv|JN874480.1:31317-31418	102	52	Strong	Strong	None	NO_DATA	1	1	Binary vector pKM24KHibm10, complete sequence	9.107468124
SdnRY1_46221	1	1	10	27	uv|KC702219.1:1-1059	106	123	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578403 (LOC102578403), transcript variant X6, misc_RNA	3.096539162
VdnRY4_15369	1	1	534	549	uv|AY568055.1:9139-10024	322	307	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598059 (LOC102598059), mRNA	2.732240437
VdnRY3_289	1	1	7	22	uv|L05083.1:3796-4440	368	353	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 73C5-like (LOC102604180), partial mRNA	2.732240437
VdnRY1_131971	1	1	1	17	uv|KJ541672.1:2690-2839	50	66	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598067 (LOC102598067), mRNA	2.919708029
CLCdnRY1_36260	1	1	13	28	uv|KF718979.1:2206-6730	4324	4309	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	3701	1		2.737226277
SdnRY1_46270	1	1	19	34	uv|KC702178.1:1-2022	1210	1195	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum acanthoscurrin-1-like (LOC102590942), mRNA	2.737226277
VdnRY2_139293	1	1	1	16	uv|KF718978.1:2204-3575	522	537	Weak	Weak	None	TRUE_BIOLOGICAL	3700	1	Solanum tuberosum chromosome 2 mitochondrion, complete sequence	2.742230347
VdnRY7_19878	1	1	20	35	uv|AF102577.1:1-176	118	103	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable leucine-rich repeat receptor-like protein kinase At1g68400 (LOC102582916), mRNA	2.742230347
SdnRY1_46361	1	1	522	538	uv|FJ931533.1:7978-12753-49	986	1002	Weak	Weak	Suspect[539,546];	TRUE_BIOLOGICAL	7215	1	Solanum lycopersicum cultivar I-3 chromosome 2	2.93040293
CLCdnRY4_31701	1	1	510	525	uv|Z22671.1:1221-1388	31	16	Weak	Weak	Suspect[526,546];	NO_DATA	1	1	Solanum demissum chromosome 5 clone PGEC472P22, complete sequence	2.747252747
CLCdnRY10_61354	1	1	3	20	uv|AY962893.1:2004-2563	234	217	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	29487	1	Solanum pennellii chromosome ch06, complete genome	3.119266055
CLCdnRY10_30070	1	1	19	34	uv|U75992.1:16925-19409	1809	1794	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	10375	1	PREDICTED: Solanum tuberosum alpha-amylase-like (LOC102582328), transcript variant X2, mRNA	2.752293578
CLCdnRY12_13629	1	1	10	25	uv|M77169.1:820-5161	2577	2562	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum transcription factor TCP11 (LOC102599511), mRNA	2.752293578
CLCdnRY12_13629	1	1	14	29	uv|U67875.1:5357-5483	89	74	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum transcription factor TCP11 (LOC102599511), mRNA	2.752293578
VdnRY6_3641	1	1	22	37	uv|KY031736.1:1-4885	86	71	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum 17.8 kDa class I heat shock protein (LOC102605425), mRNA	2.752293578
CLCdnRY8_770	1	1	11	27	uv|NGB00026.1:1029-1408	214	230	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum alpha-glucosidase-like (LOC102581005), mRNA	2.941176471
SdnRY1_46426	1	1	521	536	uv|JN874480.1:1050-2714	438	423	Weak	Weak	Suspect[537,544];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 1.2-like (LOC102579133), mRNA	2.757352941
SdnRY1_46430	1	1	514	529	uv|AY390769.1:1-1000	498	513	Weak	Weak	Suspect[530,544];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592161 (LOC102592161), transcript variant X2, mRNA	2.757352941
VdnRY1_63	1	1	507	524	uv|X65323.2:5323-5422	43	26	Weak	Weak	Suspect[525,542];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586868 (LOC102586868), transcript variant X2, mRNA	3.136531365
VdnRY2_97180	1	1	522	539	uv|KF853602.1:1019-2932	1369	1352	Weak	Weak	Suspect[540,542];	TRUE_BIOLOGICAL	7711	1		3.136531365
CLCdnRY12_39153	1	1	515	531	uv|NGB01023.1:1-50	1	17	Weak	Weak	Suspect[532,542];	TRUE_BIOLOGICAL	196118	1	Cellulosimicrobium sp. 137-9 16S ribosomal RNA gene, partial sequence	2.95202952
CLCdnRY10_58966	1	1	525	540	uv|NGB00403.1:5427-5525	36	21	Weak	Weak	Suspect[541,542];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583696 (LOC102583696), transcript variant X3, mRNA	2.767527675
SdnRY1_46501	1	1	9	24	uv|KC702222.1:1-1033	759	744	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	33958	1	PREDICTED: Solanum tuberosum calvin cycle protein CP12-1, chloroplastic (LOC102594918), mRNA	2.767527675
VdnRY3_11394	1	1	522	537	uv|KC702202.1:1-1020	79	94	Weak	Weak	Suspect[538,542];	TRUE_BIOLOGICAL	196118	1	Solanum tuberosum clone BAC BA185h21 sequence	2.767527675
CLCdnRY4_61238	1	1	22	37	uv|KF718980.1:2204-2384	179	164	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	Solanum pennellii chromosome ch12, complete genome	2.772643253
CLCdnRY11_39740	1	1	23	38	uv|U67875.1:8796-9922	217	202	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593254 (LOC102593254), ncRNA	2.777777778
CLCdnRY1_44740	1	1	104	516	uv|JN874480.1:11708-20103	1	413	Strong	Strong	None	TRUE_BIOLOGICAL	357	1	Binary vector pKM24KHibm10, complete sequence	76.43784787
CLCdnRY1_44740	1	1	67	146	uv|U09365.1:8904-9482	446	525	Strong	Strong	None	NO_DATA	1	1	Binary vector pKM24KHibm10, complete sequence	14.6567718
CLCdnRY1_44740	1	1	73	152	uv|AF234290.1:269-1476	118	197	Strong	Strong	None	NO_DATA	1	1	Binary vector pKM24KHibm10, complete sequence	14.6567718
CLCdnRY1_44740	1	1	516	539	uv|AF327720.1:1-52	3	26	Strong	Strong	None	NO_DATA	1	1	Binary vector pKM24KHibm10, complete sequence	4.26716141
VdnRY3_6281	1	1	5	22	uv|JN381160.1:2018-4126	238	221	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062677 (LOC107062677), ncRNA	3.153988868
VdnRY2_42588	1	1	511	527	uv|J02459.1:1-48502-49	29858	29842	Weak	Weak	Suspect[528,539];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum intracellular protein transport protein USO1-like (LOC102605466), mRNA	2.968460111
CLCdnRY2_29310	1	1	23	38	uv|U67875.1:8796-9922	217	202	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593254 (LOC102593254), ncRNA	2.782931354
CLCdnRY7_12274	1	1	12	27	uv|DQ058733.1:11-150	51	36	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable protein arginine N-methyltransferase 1 (LOC102585349), transcript variant X2, mRNA	2.782931354
CLCdnRY12_55179	1	1	511	526	uv|U02436.1:6848-7226	304	289	Weak	Weak	Suspect[527,538];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum putative disease resistance protein RGA1 (LOC102579076), mRNA	2.788104089
CLCdnRY12_76156	1	1	11	26	uv|JN204905.1:1-455	249	234	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	2.788104089
CLCdnRY7_46567	1	1	503	518	uv|AY390769.1:1-1000	533	548	Weak	Weak	Suspect[519,538];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 2	2.788104089
SdnRY1_46713	1	1	4	19	uv|KF718979.1:2206-6730	4445	4460	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum paired amphipathic helix protein Sin3-like 2 (LOC102601531), mRNA	2.788104089
VdnRY1_2661	1	1	507	522	uv|KF718979.1:2206-6730	1585	1570	Weak	Weak	Suspect[523,538];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum lycopersicum GATA transcription factor 26-like (LOC101246747), mRNA	2.788104089
SdnRY1_46767	1	1	500	515	uv|EF442786.1:5164-5252	53	68	Weak	Weak	Suspect[516,537];	TRUE_BIOLOGICAL	620	1	Solanum lycopersicum cultivar I-3 chromosome 2	2.793296089
CLCdnRY3_6879	1	1	513	528	uv|DQ391279.1:1-10285	3052	3037	Weak	Weak	Suspect[529,537];	TRUE_BIOLOGICAL	308911	1	Solanum tuberosum thioredoxin H-type 2-like (LOC102599106), mRNA<>Solanum tuberosum clone StDT51 thioredoxin H-type 2 mRNA, complete cds	2.793296089
SdnRY1_46739	1	1	1	16	uv|U55760.1:1-2749	2316	2331	Weak	Weak	None	TRUE_BIOLOGICAL	558016	1	Solanum pennellii chromosome ch02, complete genome	2.793296089
SdnRY1_46740	1	1	1	16	uv|U55760.1:1-2749	2316	2331	Weak	Weak	None	TRUE_BIOLOGICAL	558016	1	Solanum pennellii chromosome ch02, complete genome	2.793296089
CLCdnRY8_56325	1	1	24	39	uv|KC702173.1:1-751	149	164	Weak	Weak	Suspect[1,23];	TRUE_ARTIFICIAL	81077	81077	Solanum lycopersicum chromosome ch04, complete genome	2.798507463
CLCdnRY4_63797	1	1	507	523	uv|KC702165.1:1-1023	908	924	Weak	Weak	Suspect[524,535];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch04, complete genome	2.990654206
PBdnRY1_2040	1	1	21	36	uv|FM991889.1:857-1060	146	131	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	10860	1	PREDICTED: Solanum tuberosum peptidyl-prolyl cis-trans isomerase FKBP12 (LOC102595124), mRNA	2.803738318
VdnRY2_71314	1	1	20	35	uv|KC702170.1:1-1957	448	433	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum 3-ketoacyl-CoA synthase 20-like (LOC107061579), mRNA	2.803738318
CLCdnRY1_50901	1	1	505	520	uv|J02459.1:1-48502-49	1274	1259	Weak	Weak	Suspect[521,534];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589146 (LOC102589146), mRNA	2.808988764
CLCdnRY2_39139	1	1	503	518	uv|U13843.1:1887-9923	4424	4439	Weak	Weak	Suspect[519,534];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Nicotiana tabacum uncharacterized LOC107789768 (LOC107789768), transcript variant X3, misc_RNA	2.808988764
PBdnRY1_8513	1	1	499	514	uv|AF067196.1:4674-4707-47	44	29	Weak	Weak	Suspect[515,534];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590781 (LOC102590781), mRNA	2.808988764
CLCdnRY10_21932	1	1	510	525	uv|FJ160466.1:1899-7260-49	1218	1203	Weak	Weak	Suspect[526,534];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum RNA-binding protein BRN1-like (LOC102604979), mRNA	2.808988764
SdnRY1_46893	1	1	508	523	uv|V00604.2:1-6407-49	3103	3118	Weak	Weak	Suspect[524,534];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600019 (LOC102600019), mRNA	2.808988764
CLCdnRY7_29915	1	1	15	30	uv|V00604.2:1-6407-49	706	721	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	10861	1	Solanum tuberosum clone RH126J23, complete sequence	2.814258912
CLCdnRY7_56203	1	1	504	519	uv|J02459.1:1-48502-49	1274	1259	Weak	Weak	Suspect[520,533];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589146 (LOC102589146), mRNA	2.814258912
CLCdnRY8_29274	1	1	15	30	uv|V00604.2:1-6407-49	706	721	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	10861	1	Solanum tuberosum clone RH126J23, complete sequence	2.814258912
VdnRY2_7386	1	1	20	35	uv|JX560326.2:346-1260	148	163	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum phospholipase A1-II 1 (LOC101247389), transcript variant X2, mRNA	2.814258912
VdnRY1_2659	1	1	501	516	uv|KF718979.1:2206-6730	1585	1570	Weak	Weak	Suspect[517,532];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum lycopersicum GATA transcription factor 26-like (LOC101246747), mRNA	2.819548872
VdnRY1_40158	1	1	507	522	uv|L08933.1:1-1115	929	944	Weak	Weak	Suspect[523,531];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum F-box protein FBW2-like (LOC102593696), mRNA	2.824858757
CLCdnRY10_65899	1	1	7	24	uv|DQ883671.3:1-992	57	74	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	3.20754717
CLCdnRY10_10730	1	1	506	521	uv|KP057689.1:3175-3319	128	143	Weak	Weak	Suspect[522,530];	TRUE_BIOLOGICAL	841	1	PREDICTED: Solanum tuberosum protein yippee-like At5g53940 (LOC102595438), mRNA	2.830188679
SdnRY1_47096	1	1	513	528	uv|X70276.1:4179-4959	30	45	Weak	Weak	Suspect[529,530];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107059583 (LOC107059583), ncRNA	2.830188679
CLCdnRY11_7564	1	1	15	30	uv|U02447.1:1-1009	734	719	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	186765	1	PREDICTED: Solanum tuberosum histone H2B.2 (LOC102578986), mRNA	2.835538752
CLCdnRY11_66019	1	1	491	506	uv|M34305.1:3197-4538	1135	1120	Weak	Weak	Suspect[514,529];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-10 (LOC107057910), transcript variant X2, mRNA	2.835538752
CLCdnRY11_66019	1	1	498	513	uv|AY532632.1:5216-5418	124	109	Weak	Weak	Suspect[514,529];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-10 (LOC107057910), transcript variant X2, mRNA	2.835538752
CLCdnRY5_66465	1	1	491	506	uv|M34305.1:3197-4538	1135	1120	Weak	Weak	Suspect[514,529];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-10 (LOC107057910), transcript variant X2, mRNA	2.835538752
CLCdnRY5_66465	1	1	498	513	uv|AY532632.1:5216-5418	124	109	Weak	Weak	Suspect[514,529];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-10 (LOC107057910), transcript variant X2, mRNA	2.835538752
CLCdnRY6_483	1	1	504	519	uv|EU360889.1:4417-6776-46	442	457	Weak	Weak	Suspect[520,529];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102604990), mRNA	2.835538752
VdnRY2_30145	1	1	15	30	uv|KF719002.1:2205-2598	245	260	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599897 (LOC102599897), mRNA	2.835538752
CLCdnRY11_79751	1	1	56	370	uv|U09365.1:5556-6239	633	319	Strong	Strong	Suspect[1,2];	TRUE_BIOLOGICAL	357	1	Gateway binary vector pGWB791 DNA, complete sequence	59.46969697
CLCdnRY11_79751	1	1	352	474	uv|AF234313.1:5884-6104	221	96	Strong	Strong	Suspect[1,2];	NO_DATA	1	1	Gateway binary vector pGWB791 DNA, complete sequence	23.10606061
CLCdnRY11_79751	1	1	322	423	uv|JX025644.1:5002-5103	102	1	Strong	Strong	Suspect[1,2];	NO_DATA	1	1	Gateway binary vector pGWB791 DNA, complete sequence	19.12878788
CLCdnRY11_79751	1	1	20	59	uv|JF837312.1:9131-9272	66	105	Strong	Strong	Suspect[1,2];	NO_DATA	1	1	Gateway binary vector pGWB791 DNA, complete sequence	7.386363636
CLCdnRY11_79751	1	1	18	55	uv|EU186085.1:9196-9407-14	176	213	Strong	Strong	Suspect[1,2];	NO_DATA	1	1	Gateway binary vector pGWB791 DNA, complete sequence	7.007575758
CLCdnRY11_79751	1	1	3	23	uv|JF909478.1:3849-4965	468	448	Moderate	Strong	Suspect[1,2];	TRUE_BIOLOGICAL	10639	1	Gateway binary vector pGWB791 DNA, complete sequence	3.787878788
CLCdnRY11_55925	1	1	512	528	uv|KC702198.1:1-1023	182	198	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum zinc finger MYND domain-containing protein 15 (LOC102580887), transcript variant X1, mRNA	3.03030303
CLCdnRY5_56392	1	1	512	528	uv|KC702198.1:1-1023	182	198	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum zinc finger MYND domain-containing protein 15 (LOC102580887), transcript variant X1, mRNA	3.03030303
CLCdnRY10_44512	1	1	498	513	uv|DQ883689.3:1-1994	587	572	Weak	Weak	Suspect[514,528];	NO_DATA	1	1	Solanum tuberosum serine/threonine-protein kinase SAPK1-like (LOC102580461), mRNA<>Solanum tuberosum sucrose non-fermenting 1-related protein kinase 2 family member (SnRK2.7) mRNA, complete cds	2.840909091
CLCdnRY12_800	1	1	496	511	uv|KY031734.1:1-4625	3614	3629	Weak	Weak	Suspect[512,527];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum 40S ribosomal protein S2-4-like (LOC102581781), mRNA	2.84629981
CLCdnRY5_7329	1	1	13	28	uv|U02447.1:1-1009	734	719	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	186765	1	PREDICTED: Solanum tuberosum histone H2B.2 (LOC102578986), mRNA	2.84629981
CLCdnRY7_6832	1	1	499	514	uv|KC702196.1:1-603	531	516	Weak	Weak	Suspect[515,527];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum abscisic-aldehyde oxidase-like (LOC102599541), mRNA	2.84629981
CLCdnRY10_85516	1	1	501	516	uv|KC702187.1:1-1023	623	638	Weak	Weak	Suspect[517,526];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum aspartic proteinase nepenthesin-1 (LOC102603034), mRNA	2.851711027
SdnRY1_47295	1	1	497	512	uv|U13860.1:6124-7626-49	1161	1146	Weak	Weak	Suspect[513,526];	TRUE_BIOLOGICAL	140052	1	Solanum pennellii chromosome ch02, complete genome	2.851711027
VdnRY3_41622	1	1	20	35	uv|KC702209.1:1-2022	1077	1062	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum random slug protein 5 (LOC102605697), mRNA	2.851711027
CLCdnRY2_59825	1	1	496	511	uv|JN874480.1:1050-2714	413	428	Weak	Weak	Suspect[512,525];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum probable trehalose-phosphate phosphatase J (LOC102602183), mRNA	2.857142857
CLCdnRY11_9370	1	1	1	16	uv|X06779.1:1-4734	231	216	Weak	Weak	None	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604825 (LOC102604825), mRNA	2.857142857
VdnRY1_15410	1	1	15	30	uv|KC503966.1:3364-3696-49	231	216	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107057773 (LOC107057773), transcript variant X2, ncRNA	2.857142857
VdnRY5_62076	1	1	169	485	uv|U09365.1:5556-6239	319	635	Strong	Strong	Suspect[26,64];Suspect[523,524];	TRUE_BIOLOGICAL	357	1	Binary vector pHAtC, complete sequence	60.30534351
VdnRY1_179805	1	1	111	333	uv|KF947528.1:4361-4749	1	223	Strong	Strong	Suspect[511,524];	NO_DATA	1	1	Cloning vector pBOMBER, complete sequence	42.36641221
VdnRY1_179805	1	1	1	159	uv|KY031734.1:7505-8698	282	124	Strong	Strong	Suspect[511,524];	NO_DATA	1	1	Cloning vector pBOMBER, complete sequence	30.15267176
VdnRY1_179805	1	1	357	510	uv|U09365.1:7452-8024	305	152	Strong	Strong	Suspect[511,524];	NO_DATA	1	1	Cloning vector pBOMBER, complete sequence	29.19847328
VdnRY5_62076	1	1	65	187	uv|AF234313.1:5884-6104	96	221	Strong	Strong	Suspect[26,64];Suspect[523,524];	NO_DATA	1	1	Binary vector pHAtC, complete sequence	23.28244275
VdnRY5_62076	1	1	116	217	uv|JX025644.1:5002-5103	1	102	Strong	Strong	Suspect[26,64];Suspect[523,524];	NO_DATA	1	1	Binary vector pHAtC, complete sequence	19.27480916
VdnRY1_179805	1	1	254	342	uv|KM062046.1:4514-4739	1	88	Strong	Strong	Suspect[511,524];	NO_DATA	1	1	Cloning vector pBOMBER, complete sequence	16.79389313
VdnRY5_62076	1	1	437	505	uv|JX025643.1:5074-5255	1	69	Strong	Strong	Suspect[26,64];Suspect[523,524];	TRUE_BIOLOGICAL	357	1	Binary vector pHAtC, complete sequence	12.97709924
VdnRY1_179805	1	1	342	405	uv|AY568055.1:2738-2848	64	1	Strong	Strong	Suspect[511,524];	NO_DATA	1	1	Cloning vector pBOMBER, complete sequence	12.02290076
VdnRY5_62076	1	1	1	25	uv|AY423864.1:5350-5441	25	50	Moderate	Strong	Suspect[26,64];Suspect[523,524];	NO_DATA	1	1	Binary vector pHAtC, complete sequence	4.580152672
VdnRY5_62076	1	1	1	22	uv|HM162846.2:3253-3645	31	52	Moderate	Strong	Suspect[26,64];Suspect[523,524];	NO_DATA	1	1	Binary vector pHAtC, complete sequence	4.007633588
VdnRY5_62076	1	1	504	522	uv|KM062045.1:3072-3217	78	96	Moderate	Strong	Suspect[26,64];Suspect[523,524];	NO_DATA	1	1	Binary vector pHAtC, complete sequence	3.435114504
SdnRY1_47434	1	1	10	25	uv|L08934.1:171-1487	813	798	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-10 (LOC107062041), mRNA	2.86259542
CLCdnRY2_9242	1	1	499	514	uv|JX560397.1:83-5970	2607	2592	Weak	Weak	Suspect[515,524];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial (LOC102599771), mRNA	2.86259542
CLCdnRY7_9535	1	1	499	514	uv|JX560397.1:83-5970	2607	2592	Weak	Weak	Suspect[515,524];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial (LOC102599771), mRNA	2.86259542
SdnRY1_47408	1	1	495	510	uv|EF397941.1:1190-1287	68	53	Weak	Weak	Suspect[511,524];	NO_DATA	1	1		2.86259542
CLCdnRY12_17982	1	1	506	521	uv|KC702182.1:1-1023	894	879	Weak	Weak	Suspect[522,523];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch05, complete genome	2.868068834
SdnRY1_47478	1	1	23	38	uv|NGB00055.1:6062-6159	85	70	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum putative cysteine-rich receptor-like protein kinase 43 (LOC102590453), transcript variant X1, mRNA	2.868068834
VdnRY1_119626	1	1	20	35	uv|KC702236.1:1-1024	639	624	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum urease accessory protein F (LOC102587785), transcript variant X2, mRNA	2.868068834
VdnRY3_5869	1	1	495	510	uv|KF718978.1:2204-3575	424	439	Weak	Weak	Suspect[511,523];	TRUE_BIOLOGICAL	3700	1	Solanum pennellii chromosome ch06, complete genome	2.868068834
VdnRY2_6936	1	1	506	522	uv|EU496104.1:1815-2234	357	373	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum aquaporin SIP1-1-like (LOC102587350), transcript variant X2, mRNA	3.0651341
CLCdnRY12_13087	1	1	488	503	uv|KC702216.1:1-1022	29	14	Weak	Weak	Suspect[504,522];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604477 (LOC102604477), transcript variant X1, mRNA	2.873563218
SdnRY1_47523	1	1	495	510	uv|M77169.1:820-5161	292	307	Weak	Weak	Suspect[511,522];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061472 (LOC107061472), ncRNA	2.873563218
CLCdnRY9_60485	1	1	20	35	uv|U89671.1:1-253	74	89	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102594232 (LOC102594232), ncRNA	2.873563218
CLCdnRY9_63809	1	1	6	21	uv|AB095955.1:2407-3399	531	516	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum formin-like protein 2 (LOC102595554), mRNA	2.873563218
VdnRY2_6936	1	1	499	514	uv|U01668.1:7-1288	301	316	Weak	Weak	None	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum aquaporin SIP1-1-like (LOC102587350), transcript variant X2, mRNA	2.873563218
CLCdnRY10_7627	1	1	495	511	uv|AY753578.1:1-838	158	142	Weak	Weak	Suspect[512,521];	TRUE_BIOLOGICAL	6181	1	Solanum pennellii chromosome ch06, complete genome	3.071017274
CLCdnRY2_51000	1	1	17	33	uv|AF379854.1:3-2710	396	380	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum glutaredoxin-C9-like (LOC102593125), mRNA	3.071017274
CLCdnRY9_1755	1	1	14	29	uv|KF718978.1:2204-3575	439	424	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	3700	1	Solanum pennellii chromosome ch06, complete genome	2.879078695
VdnRY1_15220	1	1	483	498	uv|U67875.1:18-1316	111	126	Weak	Weak	Suspect[499,521];	TRUE_BIOLOGICAL	4895	1	Solanum lycopersicum cultivar I-3 chromosome 12	2.879078695
CLCdnRY12_42662	1	1	11	27	uv|AF379854.1:4263-5841	532	516	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590837 (LOC102590837), mRNA	3.076923077
SdnRY1_47638	1	1	493	508	uv|JQ927446.1:4885-6835-49	327	342	Weak	Weak	Suspect[509,520];	NO_DATA	1	1		2.884615385
CLCdnRY4_49857	1	1	14	29	uv|KY031735.1:1-4680	4160	4145	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum putative receptor-like protein kinase At4g00960 (LOC102581299), mRNA	2.884615385
CLCdnRY3_48130	1	1	5	20	uv|NGB00051.1:1428-2848	1304	1289	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 11	2.89017341
VdnRY1_126197	1	1	5	20	uv|KY031734.1:5282-5701	249	234	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum PI-PLC X domain-containing protein At5g67130 (LOC102584675), mRNA	2.895752896
CLCdnRY12_3483	1	1	5	20	uv|KC614689.1:1-590	545	530	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4930	1	Solanum tuberosum clone 145A11 ADP-ribosylation factor 1-like protein mRNA, complete cds	2.895752896
VdnRY7_8660	1	1	10	26	uv|L05669.1:7406-7834	261	245	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	110456	1	PREDICTED: Solanum tuberosum non-specific lipid-transfer protein 1-like (LOC102587043), mRNA	3.094777563
SdnRY1_47778	1	1	480	495	uv|FM991889.1:1-391	160	145	Weak	Weak	Suspect[496,517];	NO_DATA	1	1	Solanum pennellii chromosome ch07, complete genome	2.901353965
CLCdnRY12_41763	1	1	25	40	uv|U67875.1:8796-9922	500	485	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588996 (LOC102588996), transcript variant X1, misc_RNA	2.901353965
CLCdnRY2_17837	1	1	480	495	uv|KY031736.1:1-4885	131	146	Weak	Weak	Suspect[496,517];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum putative F-box/LRR-repeat protein 23 (LOC102583242), transcript variant X2, mRNA	2.901353965
CLCdnRY5_25455	1	1	18	34	uv|KF718978.1:2204-3575	90	74	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum late embryogenesis abundant protein Lea5 (LOC102578780), transcript variant X2, mRNA	3.100775194
VdnRY6_11911	1	1	10	26	uv|KY031724.1:1-5301	1726	1742	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum pennellii uncharacterized LOC107010371 (LOC107010371), mRNA	3.100775194
CLCdnRY1_35331	1	1	486	501	uv|J02459.1:1-48502-49	24013	24028	Weak	Weak	Suspect[502,516];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum EKC/KEOPS complex subunit bud32-like (LOC102592570), transcript variant X3, mRNA	2.906976744
CLCdnRY4_51452	1	1	500	515	uv|M28829.1:1-8684-49	6419	6434	Weak	Weak	None	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101249639 (LOC101249639), transcript variant X2, misc_RNA	2.912621359
SdnRY1_47845	1	1	14	29	uv|JX560397.1:83-5970	1030	1015	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	1236	1	Solanum pennellii chromosome ch05, complete genome	2.912621359
SdnRY1_47845	1	1	22	37	uv|KM407512.1:886-4985	1463	1448	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch05, complete genome	2.912621359
CLCdnRY12_9044	1	1	13	28	uv|JQ394801.1:2385-2481	58	43	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cytochrome P450 83B1-like (LOC102604056), mRNA	2.912621359
VdnRY2_33341	1	1	476	491	uv|J02459.1:1-48502-49	29804	29819	Weak	Weak	Suspect[492,515];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum receptor-like protein 12 (LOC102603958), transcript variant X2, mRNA	2.912621359
VdnRY4_15702	1	1	483	498	uv|DQ391279.1:1-10285	1841	1856	Weak	Weak	Suspect[499,515];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum activating signal cointegrator 1 complex subunit 2 (LOC102599767), mRNA	2.912621359
CLCdnRY12_22316	1	1	487	503	uv|JX573201.1:6265-6362	51	35	Weak	Weak	Suspect[504,514];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583473 (LOC102583473), mRNA	3.112840467
CLCdnRY11_64300	1	1	493	508	uv|KC702194.1:1-1023	427	442	Weak	Weak	Suspect[509,514];	TRUE_BIOLOGICAL	196118	1	Lycopersicon pimpinellifolium orion Hcr9 gene cluster, complete sequence	2.918287938
CLCdnRY10_52468	1	1	5	20	uv|X70276.1:4179-4959	45	30	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107059583 (LOC107059583), ncRNA	2.918287938
CLCdnRY12_22316	1	1	480	495	uv|Z46234.1:664-3443	171	156	Weak	Weak	Suspect[504,514];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583473 (LOC102583473), mRNA	2.918287938
VdnRY1_22325	1	1	490	511	uv|KM062044.1:2507-3208	564	543	Moderate	Moderate	Suspect[512,513];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600609 (LOC102600609), ncRNA	4.093567251
VdnRY2_3899	1	1	5	22	uv|U89937.1:10-1647	744	761	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	40674	1	PREDICTED: Solanum tuberosum serine hydroxymethyltransferase, mitochondrial-like (LOC102599354), mRNA	3.313840156
CLCdnRY9_38504	1	1	495	511	uv|D13792.1:699-858	46	62	Weak	Weak	Suspect[512,513];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599535 (LOC102599535), mRNA	3.118908382
VdnRY2_53522	1	1	11	27	uv|AY217101.1:3918-4201	198	214	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum lisH domain and HEAT repeat-containing protein KIAA1468 homolog (LOC102582556), transcript variant X1, mRNA	3.118908382
VdnRY5_9329	1	1	14	30	uv|U03498.1:4566-4750	4	20	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102598575), transcript variant X1, mRNA	3.118908382
SdnRY1_47916	1	1	492	507	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[508,513];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102605888), mRNA	2.923976608
SdnRY1_47917	1	1	492	507	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[508,513];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102605888), mRNA	2.923976608
VdnRY2_60790	1	1	494	509	uv|KC702183.1:1-1023	920	905	Weak	Weak	Suspect[510,513];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum protein PHYTOCHROME KINASE SUBSTRATE 4 (LOC102601310), mRNA	2.923976608
CLCdnRY9_26479	1	1	492	508	uv|DQ649431.1:3092-4131-49	870	886	Weak	Weak	Suspect[509,512];	TRUE_BIOLOGICAL	10292	1	PREDICTED: Solanum tuberosum rac-like GTP-binding protein RHO1 (LOC102599108), mRNA	3.125
SdnRY1_47996	1	1	19	34	uv|FJ160466.1:1899-7260-49	5166	5181	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	Aeromonas culicicola strain 2238A 23S ribosomal RNA gene, complete sequence	2.9296875
VdnRY1_19459	1	1	24	39	uv|U13189.1:15605-15827-49	161	146	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum GDSL esterase/lipase At5g03980-like (LOC102600484), mRNA	2.9296875
VdnRY2_14616	1	1	16	31	uv|X70481.1:3564-4492	597	612	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	4930	1	Solanum tuberosum strain P6/210 contig R1, complete sequence	2.9296875
VdnRY3_22561	1	1	401	453	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	10.17612524
CLCdnRY2_56302	1	1	13	28	uv|AF327712.1:1582-7289	5417	5402	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum syntaxin-22-like (LOC102601933), mRNA	2.935420744
CLCdnRY8_5071	1	1	479	494	uv|FJ710109.1:6726-9221	2265	2250	Weak	Weak	Suspect[495,511];	TRUE_BIOLOGICAL	10375	1	PREDICTED: Solanum tuberosum transcription elongation factor 1 homolog (LOC102587866), transcript variant X1, mRNA	2.935420744
CLCdnRY10_22090	1	1	480	495	uv|JN874480.1:11708-20103	6381	6396	Weak	Weak	Suspect[496,511];	NO_DATA	1	1	Solanum tuberosum chromosome 3 mitochondrion, complete sequence	2.935420744
CLCdnRY6_47521	1	1	3	24	uv|KC702194.1:1-1023	773	794	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum aminoacylase-1 (LOC102590216), transcript variant X1, mRNA	4.117647059
SdnRY1_48094	1	1	16	31	uv|KY031735.1:1-4680	2743	2758	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579877 (LOC102579877), transcript variant X1, mRNA	2.941176471
CLCdnRY1_31440	1	1	482	497	uv|AY962893.1:2004-2563	307	292	Weak	Weak	Suspect[498,509];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum lycopersicum VAN3-binding protein (LOC101259774), mRNA	2.946954813
VdnRY2_124451	1	1	12	27	uv|M77169.1:820-5161	3487	3502	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	1485	1	Solanum pennellii chromosome ch06, complete genome	2.946954813
VdnRY2_124451	1	1	19	34	uv|KC702187.1:1-1023	484	469	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch06, complete genome	2.946954813
CLCdnRY4_43358	1	1	492	507	uv|J02459.1:1-48502-49	8972	8957	Weak	Weak	Suspect[508,508];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum peroxisomal membrane protein PEX14 (LOC102585238), mRNA	2.952755906
VdnRY7_6461	1	1	7	22	uv|KF719011.1:2838-2981	63	78	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604838 (LOC102604838), mRNA	2.952755906
CLCdnRY2_54574	1	1	470	487	uv|LC029924.1:5516-5613	32	15	Weak	Weak	Suspect[488,507];	TRUE_BIOLOGICAL	186765	1	PREDICTED: Solanum tuberosum auxin transport protein BIG (LOC102599636), mRNA	3.353057199
CLCdnRY1_59371	1	1	16	31	uv|U67875.1:6835-8216	329	344	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	4895	1	Solanum tuberosum glucan endo-1,3-beta-glucosidase 12-like (LOC102595860), mRNA<>Solanum tuberosum beta-1,3-glucanase 10 (B13G_10) mRNA, complete cds	2.964426877
CLCdnRY2_36537	1	1	471	486	uv|AY962893.1:2004-2563	300	285	Weak	Weak	Suspect[487,506];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum tuberosum protein NEN1-like (LOC102585847), mRNA	2.964426877
CLCdnRY3_14111	1	1	478	493	uv|KF718979.1:2206-6730	1658	1673	Weak	Weak	Suspect[494,506];	TRUE_BIOLOGICAL	3701	1	Solanum tuberosum StCBP mRNA for citrate binding protein, complete cds	2.964426877
SdnRY1_48396	1	1	473	488	uv|KC702202.1:1-1020	459	474	Weak	Weak	Suspect[489,505];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 6	2.97029703
CLCdnRY11_3152	1	1	24	39	uv|U13864.1:2748-4229-44	1038	1053	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum chitinase (chtB3) mRNA, partial cds	2.97029703
CLCdnRY11_62195	1	1	25	40	uv|U89961.1:1-4240	240	225	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch04, complete genome	2.97029703
VdnRY1_70667	1	1	10	25	uv|U13859.1:1543-1708	107	122	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum importin-5-like (LOC102592059), mRNA	2.97029703
CLCdnRY10_33365	1	1	465	486	uv|U89929.1:723-1593	600	579	Weak	Weak	Suspect[487,504];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum putative F-box protein PP2-B12 (LOC102591767), mRNA	4.166666667
CLCdnRY6_28773	1	1	25	40	uv|U89961.1:1-4240	240	225	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch04, complete genome	2.976190476
VdnRY3_48156	1	1	11	26	uv|J02459.1:1-48502-49	31181	31196	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102604990), mRNA	2.976190476
CLCdnRY1_42207	1	1	23	38	uv|M77169.1:820-5161	2466	2481	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum LRR receptor-like serine/threonine-protein kinase EFR (LOC107061674), mRNA	2.976190476
CLCdnRY2_472	1	1	2	17	uv|JQ895026.1:12144-12289	73	88	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	PREDICTED: Solanum tuberosum isocitrate dehydrogenase [NADP] (LOC102591365), mRNA	2.976190476
CLCdnRY7_524	1	1	2	17	uv|JQ895026.1:12144-12289	73	88	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	PREDICTED: Solanum tuberosum isocitrate dehydrogenase [NADP] (LOC102591365), mRNA	2.976190476
CLCdnRY2_33420	1	1	1	29	uv|KC702186.1:1-274	262	234	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii protein IQ-DOMAIN 1-like (LOC107002416), transcript variant X2, mRNA	5.566600398
CLCdnRY11_17502	1	1	2	18	uv|HM640258.1:317-2913	1257	1241	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	5073	1	Solanum pennellii chromosome ch09, complete genome	3.180914513
CLCdnRY4_56206	1	1	475	491	uv|NGB00413.1:4732-7508	1939	1955	Weak	Weak	Suspect[492,503];	TRUE_BIOLOGICAL	12103	1	PREDICTED: Solanum tuberosum cysteine-rich receptor-like protein kinase 10 (LOC102603268), transcript variant X2, mRNA	3.180914513
VdnRY2_26560	1	1	481	496	uv|L08860.1:1858-2910-49	194	179	Weak	Weak	Suspect[497,503];	NO_DATA	1	1	PREDICTED: Solanum tuberosum OPA3-like protein (LOC102584488), mRNA	2.982107356
CLCdnRY4_38746	1	1	471	486	uv|FJ160466.1:1899-7260-49	5181	5166	Weak	Weak	Suspect[487,502];	NO_DATA	1	1	Neisseria mucosa strain ATCC 19696 chromosome, complete genome	2.988047809
CLCdnRY6_61806	1	1	22	37	uv|U62637.1:2498-2592	59	44	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 53 (LOC102586367), transcript variant X2, mRNA	2.988047809
VdnRY5_11623	1	1	483	500	uv|EF442786.1:5501-5600	62	79	Weak	Weak	Suspect[501,501];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor ERF054 (LOC102599959), mRNA	3.393213573
CLCdnRY11_5292	1	1	471	487	uv|KC702194.1:1-1023	960	944	Weak	Weak	Suspect[488,501];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum histidine-containing phosphotransfer protein 4-like (LOC102584884), mRNA	3.193612774
SdnRY1_48570	1	1	480	495	uv|Z46234.1:664-3443	171	156	Weak	Weak	Suspect[496,501];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583473 (LOC102583473), mRNA	2.994011976
SdnRY1_48566	1	1	23	38	uv|AY738222.1:55-1801	1068	1053	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	Solanum tuberosum uncharacterized LOC102577759 (LOC102577759), mRNA<>Solanum tuberosum clone 155A10 unknown mRNA	2.994011976
VdnRY2_2980	1	1	8	23	uv|KY031735.1:1-4680	1818	1833	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum ubiquitin-conjugating enzyme E2-23 kDa (LOC102603326), mRNA	2.994011976
VdnRY3_288	1	1	7	22	uv|L05083.1:3796-4440	368	353	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 73C5-like (LOC102604180), partial mRNA	2.994011976
VdnRY3_14647	1	1	470	485	uv|GQ231553.1:512-1019	240	225	Weak	Weak	Suspect[486,501];	TRUE_BIOLOGICAL	1301	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586253 (LOC102586253), mRNA	2.994011976
VdnRY3_14647	1	1	461	476	uv|M99566.1:1654-2277	345	360	None	Weak	Suspect[486,501];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586253 (LOC102586253), mRNA	2.994011976
CLCdnRY4_42845	1	1	464	481	uv|U13843.1:1887-9923	1806	1789	Weak	Weak	Suspect[482,500];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum lycopersicum protein trichome birefringence-like 10 (LOC101251789), mRNA	3.4
VdnRY1_119628	1	1	20	35	uv|KC702236.1:1-1024	639	624	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum urease accessory protein F (LOC102587785), transcript variant X2, mRNA	3.006012024
CLCdnRY11_17453	1	1	19	35	uv|V00604.2:1-6407-49	963	947	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593326 (LOC102593326), mRNA	3.212851406
CLCdnRY10_40906	1	1	474	489	uv|FJ160466.1:1899-7260-49	1218	1203	Weak	Weak	Suspect[490,498];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum RNA-binding protein BRN1-like (LOC102604979), mRNA	3.012048193
CLCdnRY12_10238	1	1	463	478	uv|NGB00030.1:2980-3913	290	275	Weak	Weak	Suspect[479,498];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581666 (LOC102581666), mRNA	3.012048193
CLCdnRY6_4597	1	1	463	478	uv|NGB00030.1:2980-3913	290	275	Weak	Weak	Suspect[479,498];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581666 (LOC102581666), mRNA	3.012048193
VdnRY1_97546	1	1	3	18	uv|KU936037.1:2198-2313	63	78	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	3.012048193
VdnRY4_46859	1	1	465	481	uv|NGB00402.1:2108-3532	1147	1163	Weak	Weak	Suspect[482,497];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	3.219315895
CLCdnRY11_30502	1	1	481	496	uv|KC503966.1:3008-3232	101	116	Weak	Weak	Suspect[497,497];	NO_DATA	1	1	PREDICTED: Solanum tuberosum beta-glucosidase BoGH3B-like (LOC102599864), transcript variant X3, mRNA	3.018108652
CLCdnRY9_31721	1	1	11	26	uv|J02400.1:1-5243-49	3174	3189	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum uncharacterized LOC107058730 (LOC107058730), transcript variant X2, ncRNA	3.018108652
SdnRY1_48845	1	1	1	22	uv|U55760.1:1-2749	2312	2333	Weak	Weak	None	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase RING1-like (LOC102605063), mRNA	4.233870968
CLCdnRY3_16378	1	1	475	491	uv|NGB00413.1:4732-7508	1939	1955	Weak	Weak	Suspect[492,496];	TRUE_BIOLOGICAL	12103	1	PREDICTED: Solanum tuberosum cysteine-rich receptor-like protein kinase 10 (LOC102603268), transcript variant X2, mRNA	3.225806452
SdnRY1_48880	1	1	21	37	uv|KC702178.1:1-2022	176	192	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum UDP-glucose iridoid glucosyltransferase-like (LOC102589593), mRNA	3.225806452
CLCdnRY10_34496	1	1	23	38	uv|J02459.1:1-48502-49	30172	30157	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum steroid 5-alpha-reductase DET2 (LOC102583495), mRNA	3.024193548
VdnRY4_31820	1	1	468	483	uv|JX560397.1:83-5970	4940	4955	Weak	Weak	Suspect[484,496];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583478 (LOC102583478), mRNA	3.024193548
CLCdnRY7_22411	1	1	18	33	uv|M28829.1:1-8684-49	3022	3007	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	561	1		3.024193548
CLCdnRY9_7068	1	1	470	485	uv|M19415.1:1615-1711	82	97	Weak	Weak	Suspect[486,496];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum V-type proton ATPase subunit E-like (LOC102600657), mRNA	3.024193548
CLCdnRY7_23869	1	1	15	30	uv|JX560397.1:83-5970	5380	5395	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	29487	1	Solanum demissum R8 gene cluster, partial sequence	3.03030303
VdnRY2_40114	1	1	474	489	uv|DQ839632.1:2694-2846	33	18	Weak	Weak	Suspect[490,494];	TRUE_BIOLOGICAL	1386	1	Solanum pennellii chromosome ch09, complete genome	3.036437247
VdnRY4_61047	1	1	14	29	uv|JF909482.1:3850-8059	3577	3562	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581510 (LOC102581510), transcript variant X2, mRNA	3.036437247
VdnRY4_10479	1	1	479	494	uv|JN874481.1:20319-20375	18	33	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598527 (LOC102598527), mRNA	3.036437247
VdnRY2_1336	1	1	245	297	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2c gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	10.54766734
SdnRY1_49045	1	1	17	33	uv|U42373.1:2529-2868	36	20	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	8782	1	Solanum lycopersicum chromosome ch12, complete genome	3.245436105
CLCdnRY7_34084	1	1	454	470	uv|JN581377.1:1749-2242	253	269	Weak	Weak	Suspect[471,493];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1B-12 (LOC102583714), transcript variant X6, mRNA	3.245436105
CLCdnRY1_20924	1	1	16	31	uv|M28829.1:1-8684-49	3022	3007	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	561	1		3.042596349
VdnRY4_18945	1	1	22	37	uv|KF719011.1:2838-2981	63	78	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604838 (LOC102604838), mRNA	3.042596349
CLCdnRY11_67211	1	1	12	29	uv|HQ418395.1:5572-6400	544	561	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum WRKY transcription factor 1-like (LOC102605648), mRNA	3.455284553
CLCdnRY3_63322	1	1	4	19	uv|DQ649431.1:3092-4131-49	743	728	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	10292	1		3.048780488
SdnRY1_49118	1	1	472	491	uv|U02436.1:3152-4436	665	646	Moderate	Moderate	None	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 2	3.869653768
CLCdnRY6_77082	1	1	469	485	uv|DQ391279.1:1-10285	1191	1207	Weak	Weak	Suspect[486,491];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum uncharacterized protein YqeH (LOC102583878), mRNA	3.258655804
CLCdnRY1_2506	1	1	18	33	uv|NGB00055.1:1-1950	1445	1430	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum uncharacterized LOC102606345 (LOC102606345), mRNA	3.054989817
CLCdnRY8_2867	1	1	18	33	uv|NGB00055.1:1-1950	1445	1430	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum uncharacterized LOC102606345 (LOC102606345), mRNA	3.054989817
VdnRY6_17695	1	1	463	479	uv|J02459.1:1-48502-49	43904	43920	Weak	Weak	Suspect[480,490];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581072 (LOC102581072), mRNA	3.265306122
VdnRY3_8441	1	1	1	16	uv|LC121520.1:4008-4664	243	258	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum 37S ribosomal protein S9, mitochondrial (LOC102587067), mRNA	3.06122449
SdnRY1_49219	1	1	471	488	uv|AF379854.1:3-2710	1862	1879	Weak	Weak	Suspect[489,489];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum putative germin-like protein 2-1 (LOC102600489), mRNA	3.476482618
SdnRY1_49218	1	1	455	472	uv|KM407505.1:939-2365	489	472	Weak	Weak	Suspect[473,489];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101251336 (LOC101251336), ncRNA	3.476482618
VdnRY4_18284	1	1	15	31	uv|EU048866.1:1404-1498	47	31	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ATP-dependent RNA helicase glh-2-like (LOC107061407), mRNA	3.27198364
CLCdnRY11_31406	1	1	460	475	uv|JN581374.1:616-2149	1074	1089	Weak	Weak	Suspect[476,489];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 1	3.067484663
CLCdnRY5_26930	1	1	1	16	uv|JN381160.1:2018-4126	1217	1232	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum 2-alkenal reductase (NADP(+)-dependent)-like (LOC102583129), mRNA	3.067484663
VdnRY2_41158	1	1	2	17	uv|JX025642.1:5090-5607	224	209	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum 7-deoxyloganetin glucosyltransferase-like (LOC102599261), mRNA	3.067484663
VdnRY2_74433	1	1	472	487	uv|U13189.1:9688-10585	692	677	Weak	Weak	Suspect[488,489];	NO_DATA	1	1	Solanum lycopersicum chromosome ch05, complete genome	3.067484663
CLCdnRY3_39388	1	1	3	18	uv|KC702216.1:1-1022	740	725	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii 60S ribosomal protein L18a-like protein (LOC107023190), mRNA	3.073770492
CLCdnRY10_61725	1	1	462	479	uv|JQ927446.1:4885-6835-49	1182	1199	Weak	Weak	Suspect[480,487];	NO_DATA	1	1	Solanum pennellii chromosome ch09, complete genome	3.490759754
SdnRY1_49335	1	1	457	473	uv|FJ160466.1:1899-7260-49	4609	4625	Weak	Weak	Suspect[474,487];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum amino acid transporter ANTL2-like (LOC102589712), mRNA	3.285420945
CLCdnRY5_55748	1	1	1	16	uv|U02452.1:1-991	510	525	Weak	Weak	None	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum transcription factor PRE6-like (LOC102605552), mRNA	3.080082136
SdnRY1_49286	1	1	472	487	uv|U55760.1:1-2749	2309	2324	Weak	Weak	None	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum pennellii uncharacterized LOC107026224 (LOC107026224), mRNA	3.080082136
CLCdnRY11_60547	1	1	6	21	uv|X53127.1:443-904	406	421	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial (LOC102604609), transcript variant X3, misc_RNA	3.086419753
CLCdnRY11_35831	1	1	1	16	uv|AF379854.1:3-2710	608	623	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	Solanum lycopersicum cultivar I-3 chromosome 12	3.092783505
CLCdnRY3_38987	1	1	16	31	uv|NGB00051.1:1428-2848	631	616	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase Aurora-2 (LOC102596793), mRNA	3.092783505
CLCdnRY6_51248	1	1	1	16	uv|X70481.1:3564-4492	736	751	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 1	3.092783505
CLCdnRY11_853	1	1	452	467	uv|KY031733.1:1-4952	1806	1791	Weak	Weak	Suspect[468,485];	TRUE_BIOLOGICAL	82115	1	Solanum lycopersicum cultivar I-3 chromosome 4	3.092783505
CLCdnRY5_63866	1	1	1	16	uv|AF379854.1:3-2710	608	623	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	Solanum lycopersicum cultivar I-3 chromosome 12	3.092783505
CLCdnRY3_51180	1	1	24	41	uv|KF680544.1:323-942	456	473	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	3.519668737
SdnRY1_49501	1	1	1	17	uv|AF028837.1:233-521	150	166	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum basic proline-rich protein-like (LOC102598061), transcript variant X5, mRNA	3.3126294
CLCdnRY1_37893	1	1	16	32	uv|KC702216.1:1-1022	250	234	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum U3 small nucleolar ribonucleoprotein protein MPP10 (LOC102591201), transcript variant X4, mRNA	3.3126294
CLCdnRY11_78035	1	1	448	463	uv|JX573201.1:3061-3178	64	49	Weak	Weak	Suspect[464,483];	NO_DATA	1	1	Klebsormidium sp. SAG 51.86 chloroplast, partial genome	3.105590062
SdnRY1_49505	1	1	24	39	uv|J02459.1:1-48502-49	44266	44281	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum eukaryotic translation initiation factor 5-like (LOC102586907), transcript variant X3, mRNA	3.105590062
VdnRY7_22366	1	1	11	26	uv|NGB00828.1:1-63	35	20	Weak	Weak	Suspect[1,10];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum 30S ribosomal protein S5, chloroplastic (LOC102585478), mRNA	3.105590062
SdnRY1_49579	1	1	212	252	uv|KF719004.1:2204-2946	73	113	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Nicotiana tabacum ribulose bisphosphate carboxylase small chain, chloroplastic-like (LOC107771723), mRNA	8.298755187
VdnRY5_43539	1	1	1	23	uv|U67875.1:18-1316	1111	1089	Weak	Weak	None	TRUE_BIOLOGICAL	4895	1	Solanum tuberosum proteinase inhibitor I precursor (LOC102577649), mRNA<>Solanum tuberosum clone 066E06 proteinase inhibitor I precursor, mRNA, complete cds	4.564315353
CLCdnRY12_47413	1	1	21	38	uv|J02482.1:1-5386-49	4638	4621	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum heavy metal-associated isoprenylated plant protein 26-like (LOC102599308), mRNA	3.526970954
SdnRY1_49614	1	1	25	40	uv|J02459.1:1-48502-49	21649	21634	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062930 (LOC107062930), ncRNA	3.112033195
SdnRY1_49614	1	1	30	45	uv|KF718995.1:2216-3853	349	334	None	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062930 (LOC107062930), ncRNA	3.112033195
CLCdnRY12_35860	1	1	20	35	uv|EU496100.1:270-2269	570	555	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	Solanum stoloniferum isolate SS16 chloroplast, complete genome	3.112033195
CLCdnRY11_34428	1	1	5	20	uv|U67875.1:6835-8216	718	703	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum inactive protein kinase SELMODRAFT_444075 (LOC102592867), transcript variant X2, mRNA	3.118503119
SdnRY1_49697	1	1	306	346	uv|KF719004.1:2204-2946	73	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS3 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	8.333333333
SdnRY1_49722	1	1	1	16	uv|LC121520.1:2705-3093	95	110	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch10, complete genome	3.125
VdnRY1_84779	1	1	443	458	uv|M77169.1:820-5161	1627	1642	Weak	Weak	Suspect[459,480];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum histone H1-like (LOC102589354), mRNA	3.125
CLCdnRY12_10476	1	1	463	478	uv|JX560397.1:83-5970	571	556	Weak	Weak	Suspect[479,480];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor ERF061-like (LOC102586292), mRNA	3.125
CLCdnRY6_65672	1	1	7	22	uv|GU593055.1:4102-4364	214	229	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581125 (LOC102581125), transcript variant X3, mRNA	3.125
CLCdnRY8_20405	1	1	25	40	uv|KF719007.1:2203-2693	360	345	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum oligopeptide transporter 7-like (LOC102585562), mRNA	3.125
CLCdnRY1_31657	1	1	21	37	uv|U02436.1:3152-4436	844	828	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590102 (LOC102590102), transcript variant X2, mRNA	3.340292276
CLCdnRY6_20879	1	1	442	458	uv|U02447.1:1-1009	833	849	Weak	Weak	Suspect[459,479];	TRUE_BIOLOGICAL	186765	1	PREDICTED: Solanum tuberosum probable L-type lectin-domain containing receptor kinase S.5 (LOC102598245), mRNA	3.340292276
SdnRY1_49786	1	1	454	469	uv|KP057689.1:3175-3319	29	44	Weak	Weak	Suspect[470,479];	TRUE_BIOLOGICAL	841	1	PREDICTED: Solanum tuberosum F-box protein At2g17036-like (LOC102600368), mRNA	3.131524008
CLCdnRY12_74962	1	1	14	29	uv|BD084659.1:262-359	35	50	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum apoptosis-enhancing nuclease (LOC102580448), mRNA	3.131524008
CLCdnRY12_49978	1	1	438	460	uv|U09365.1:787-1365	297	319	Weak	Weak	Suspect[461,478];	NO_DATA	1	1	PREDICTED: Solanum tuberosum zinc finger protein CONSTANS-LIKE 3-like (LOC102600093), mRNA	4.60251046
CLCdnRY3_73987	1	1	443	459	uv|J02459.1:1-48502-49	43634	43618	Weak	Weak	Suspect[460,478];	TRUE_BIOLOGICAL	10699	1	Solanum demissum chromosome 5 clone PGEC568H16, complete sequence	3.347280335
SdnRY1_49815	1	1	457	472	uv|J02459.1:1-48502-49	29804	29819	Weak	Weak	Suspect[473,478];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum receptor-like protein 12 (LOC102603958), transcript variant X1, mRNA	3.138075314
VdnRY7_24726	1	1	442	457	uv|X53127.1:443-904	196	181	Weak	Weak	Suspect[458,478];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum photosystem I reaction center subunit II, chloroplastic (LOC102601295), mRNA	3.138075314
SdnRY1_49901	1	1	11	26	uv|NGB00413.1:4732-7508	758	743	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	12103	1	PREDICTED: Solanum tuberosum protein FRIGIDA-like (LOC102602096), mRNA	3.144654088
CLCdnRY8_68	1	1	8	23	uv|KM407505.1:939-2365	617	602	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum photosystem II 22 kDa protein, chloroplastic (LOC102593103), mRNA	3.144654088
CLCdnRY12_18044	1	1	445	460	uv|U03992.1:408-1934	190	175	Weak	Weak	Suspect[461,476];	TRUE_BIOLOGICAL	28216	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593640 (LOC102593640), transcript variant X1, mRNA	3.151260504
CLCdnRY5_56947	1	1	23	38	uv|M16217.1:1-2529	1676	1691	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum clone RH066A20, complete sequence	3.151260504
VdnRY2_25359	1	1	6	22	uv|EU048866.1:1404-1498	47	31	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum pennellii periaxin-like (LOC107014321), transcript variant X1, mRNA	3.368421053
CLCdnRY4_45391	1	1	25	42	uv|AY529716.1:752-854	77	60	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 10 (LOC102581049), mRNA	3.58649789
CLCdnRY7_10725	1	1	7	23	uv|Z46234.1:664-3443	1344	1360	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum GILT-like protein F37H8.5 (LOC102597709), mRNA	3.375527426
VdnRY4_22583	1	1	458	474	uv|KC702202.1:1-1020	233	217	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At1g53440 (LOC102597840), mRNA	3.375527426
CLCdnRY3_36011	1	1	5	20	uv|J02459.1:1-48502-49	22671	22656	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum titin (LOC102603317), transcript variant X14, mRNA	3.164556962
CLCdnRY9_54622	1	1	448	463	uv|KC702211.1:1-536	253	238	Weak	Weak	Suspect[464,473];	TRUE_ARTIFICIAL	81077	81077	Solanum pennellii chromosome ch02, complete genome	3.171247357
CLCdnRY12_48777	1	1	18	33	uv|EF694056.1:1-945	240	255	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 1.2-like (LOC102579133), mRNA	3.171247357
CLCdnRY2_35175	1	1	458	473	uv|U09663.1:197-287	56	71	Weak	Weak	None	TRUE_BIOLOGICAL	40674	1	PREDICTED: Solanum tuberosum GATA transcription factor 8-like (LOC102587928), transcript variant X2, mRNA	3.171247357
CLCdnRY2_51742	1	1	448	463	uv|U35128.1:2667-2762	19	4	Weak	Weak	Suspect[464,473];	TRUE_BIOLOGICAL	10663	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580851 (LOC102580851), transcript variant X5, ncRNA	3.171247357
VdnRY5_5498	1	1	10	25	uv|J02482.1:1-5386-49	3339	3354	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum putative lipase YOR059C (LOC102598167), transcript variant X2, mRNA	3.171247357
VdnRY5_46983	1	1	19	34	uv|U09128.1:11913-12244	106	121	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial (LOC102585612), mRNA	3.171247357
VdnRY6_24092	1	1	19	34	uv|U09128.1:11913-12244	166	181	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	4892	1	Solanum pennellii chromosome ch03, complete genome	3.171247357
VdnRY7_5807	1	1	450	465	uv|JN581374.1:616-2149	456	441	Weak	Weak	Suspect[466,473];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum gibberellin-regulated protein 11-like (LOC102589718), mRNA	3.171247357
CLCdnRY10_80740	1	1	36	472	uv|AF327711.1:665-1379	45	481	Strong	Strong	Suspect[1,1];Suspect[23,35];	TRUE_BIOLOGICAL	4910	1	Expression vector pHC60, complete sequence	92.37288136
VdnRY1_179804	1	1	1	308	uv|U37573.1:2706-4083	638	331	Strong	Strong	Suspect[458,472];	NO_DATA	1	1	Reporter vector pBNP1, complete sequence	65.04237288
VdnRY1_179804	1	1	109	321	uv|JX310866.1:2211-2467	1	217	Strong	Strong	Suspect[458,472];	NO_DATA	1	1	Reporter vector pBNP1, complete sequence	44.91525424
VdnRY1_179804	1	1	315	457	uv|U09365.1:7452-8024	312	170	Strong	Strong	Suspect[458,472];	NO_DATA	1	1	Reporter vector pBNP1, complete sequence	30.08474576
CLCdnRY10_80740	1	1	2	22	uv|AF327720.1:664-719	36	56	Moderate	Strong	Suspect[1,1];Suspect[23,35];	NO_DATA	1	1	Expression vector pHC60, complete sequence	4.237288136
CLCdnRY10_11560	1	1	16	38	uv|U67875.1:18-1316	1111	1089	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	4895	1	Solanum tuberosum proteinase inhibitor I precursor (LOC102577649), mRNA<>Solanum tuberosum clone 066E06 proteinase inhibitor I precursor, mRNA, complete cds	4.670912951
CLCdnRY4_8539	1	1	16	38	uv|U67875.1:18-1316	1111	1089	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	4895	1	Solanum tuberosum proteinase inhibitor I precursor (LOC102577649), mRNA<>Solanum tuberosum clone 066E06 proteinase inhibitor I precursor, mRNA, complete cds	4.670912951
CLCdnRY5_22054	1	1	439	455	uv|U02452.1:4310-5466	157	141	Weak	Weak	Suspect[456,471];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum pennellii trans-cinnamate 4-monooxygenase-like (LOC107022867), transcript variant X2, mRNA	3.397027601
CLCdnRY10_8311	1	1	452	467	uv|J02400.1:1-5243-49	4785	4800	Weak	Weak	Suspect[468,471];	TRUE_BIOLOGICAL	151341	1	Solanum pennellii chromosome ch12, complete genome	3.184713376
VdnRY2_48944	1	1	12	27	uv|U13864.1:2748-4229-44	970	955	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum non-specific phospholipase C2 (LOC102580356), mRNA	3.184713376
CLCdnRY10_11808	1	1	1	16	uv|J02400.1:1-5243-49	5015	5000	Weak	Weak	None	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum keratin, type II cytoskeletal 60 kDa, component III-like (LOC102581407), mRNA	3.191489362
VdnRY3_6520	1	1	431	446	uv|LC121522.1:1731-1818	28	43	Weak	Weak	Suspect[447,470];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 5	3.191489362
VdnRY7_12847	1	1	7	22	uv|KY031737.1:1-5023	1212	1227	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum soluble inorganic pyrophosphatase 6, chloroplastic-like (LOC102600433), mRNA	3.191489362
CLCdnRY3_54842	1	1	13	31	uv|U02427.1:2631-2729	12	30	Moderate	Moderate	Suspect[1,12];	TRUE_BIOLOGICAL	10699	1	Solanum tuberosum chromosome unknown clone RHPOTKEY012A20, complete sequence	3.837953092
VdnRY5_8877	1	1	441	457	uv|KC702228.1:1-1023	31	47	Weak	Weak	Suspect[458,469];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum stromal 70 kDa heat shock-related protein, chloroplastic (LOC102588246), mRNA	3.411513859
VdnRY3_4573	1	1	9	24	uv|KM407505.1:939-2365	642	627	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585896 (LOC102585896), mRNA	3.198294243
SdnRY1_50473	1	1	20	36	uv|JN581377.1:606-767	115	131	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum ankyrin repeat, bromo and BTB domain-containing protein DDB_G0293800 (LOC102600407), mRNA	3.418803419
CLCdnRY9_51789	1	1	12	28	uv|U89961.1:1-4240	3864	3880	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum dirigent protein 17-like (LOC102603105), transcript variant X2, mRNA	3.418803419
CLCdnRY10_58264	1	1	449	464	uv|AF327895.1:644-842	90	75	Weak	Weak	Suspect[465,468];	NO_DATA	1	1	Solanum pennellii chromosome ch09, complete genome	3.205128205
VdnRY6_15788	1	1	435	450	uv|AF379854.1:3-2710	1316	1331	Weak	Weak	Suspect[451,468];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum protein PAM68, chloroplastic (LOC102590958), mRNA	3.205128205
CLCdnRY3_45902	1	1	20	36	uv|FM991889.1:1-391	180	196	Weak	Weak	Suspect[1,19];	NO_DATA	1	1		3.426124197
SdnRY1_50536	1	1	12	27	uv|KC702236.1:1-1024	528	543	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum protein Brevis radix-like 1 (LOC102578836), mRNA	3.211991435
SdnRY1_50483	1	1	450	465	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[466,467];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch03, complete genome	3.211991435
CLCdnRY3_29301	1	1	19	34	uv|KF719005.1:2205-5132	281	266	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch12, complete genome	3.21888412
VdnRY1_70552	1	1	430	446	uv|M18328.1:1541-1636	46	62	Weak	Weak	Suspect[447,465];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 60S acidic ribosomal protein P1-like (LOC102582163), mRNA	3.440860215
CLCdnRY10_55248	1	1	16	31	uv|V00604.2:1-6407-49	182	197	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	10861	1	Solanum pennellii chromosome ch09, complete genome	3.225806452
SdnRY1_50619	1	1	448	463	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[464,465];	TRUE_BIOLOGICAL	10699	1	Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-2) gene, nuclear gene encoding chloroplast protein, complete cds	3.225806452
SdnRY1_50620	1	1	448	463	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[464,465];	TRUE_BIOLOGICAL	10699	1	Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-2) gene, nuclear gene encoding chloroplast protein, complete cds	3.225806452
VdnRY2_114777	1	1	439	454	uv|EF216318.1:622-720	25	40	Weak	Weak	Suspect[455,465];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum endoglucanase 6-like (LOC102589512), mRNA	3.225806452
VdnRY7_7808	1	1	434	449	uv|JX560397.1:83-5970	5398	5413	Weak	Weak	Suspect[450,465];	TRUE_BIOLOGICAL	29487	1	Solanum lycopersicum cultivar I-3 chromosome 3	3.225806452
VdnRY7_23974	1	1	445	461	uv|NGB00026.1:1029-1408	230	214	Weak	Weak	Suspect[462,464];	NO_DATA	1	1	PREDICTED: Solanum tuberosum alpha-glucosidase-like (LOC102581005), mRNA	3.448275862
CLCdnRY12_38154	1	1	1	16	uv|KF718996.1:2914-4532	383	368	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative G3BP-like protein (LOC102594129), transcript variant X4, mRNA	3.232758621
VdnRY3_9091	1	1	435	450	uv|J02459.1:1-48502-49	25392	25407	Weak	Weak	Suspect[451,464];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum transcription factor FAMA-like (LOC102586799), mRNA	3.232758621
VdnRY7_5531	1	1	445	460	uv|X70481.1:3564-4492	843	828	Weak	Weak	Suspect[461,464];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584429 (LOC102584429), mRNA	3.232758621
CLCdnRY11_59883	1	1	8	23	uv|L08867.1:3320-3525	76	61	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum tuberosum D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like (LOC102588117), mRNA	3.239740821
CLCdnRY7_38646	1	1	443	458	uv|NGB00587.1:1-3232	1770	1755	Weak	Weak	Suspect[459,463];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum telomere repeat-binding protein 5-like (LOC102584447), transcript variant X5, mRNA	3.239740821
VdnRY7_19721	1	1	442	458	uv|KC702201.1:1-1023	305	289	Weak	Weak	Suspect[459,462];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum 3-ketoacyl-CoA thiolase 2, peroxisomal (LOC102578706), mRNA	3.463203463
CLCdnRY11_42324	1	1	25	40	uv|M28248.1:1-1709	274	259	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum lipid droplet-associated hydrolase (LOC102585600), transcript variant X2, mRNA	3.246753247
VdnRY3_64942	1	1	1	16	uv|AF379854.1:4263-5841	1198	1183	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1		3.246753247
VdnRY4_31504	1	1	439	454	uv|KF718978.1:2204-3575	1115	1130	Weak	Weak	Suspect[455,461];	TRUE_BIOLOGICAL	3700	1	Solanum lycopersicum cultivar I-3 chromosome 7	3.253796095
CLCdnRY10_8360	1	1	2	18	uv|X02513.1:851-946	22	38	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum malate dehydrogenase, mitochondrial-like (LOC102606140), transcript variant X1, mRNA	3.47826087
VdnRY1_64454	1	1	6	22	uv|M64753.1:1943-3400	1276	1292	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	590	1	Solanum demissum chromosome 11 clone PGEC591C22, complete sequence	3.47826087
VdnRY4_56840	1	1	435	450	uv|JN874480.1:1050-2714	1171	1186	Weak	Weak	Suspect[451,460];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum putative GTP diphosphokinase RSH1, chloroplastic (LOC102597214), transcript variant X4, mRNA	3.260869565
VdnRY6_26391	1	1	10	25	uv|AF379854.1:3-2710	1855	1870	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum vesicle transport protein GOT1B-like (LOC102580305), mRNA	3.260869565
CLCdnRY11_67625	1	1	440	455	uv|U02436.1:3152-4436	1139	1154	Weak	Weak	Suspect[456,460];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase RGLG2-like (LOC102585646), transcript variant X2, mRNA	3.260869565
VdnRY4_11103	1	1	23	38	uv|L08862.1:1-2039	1450	1435	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1279	1	Solanum demissum chromosome 11 clone PGEC591C22, complete sequence	3.260869565
VdnRY6_9188	1	1	14	29	uv|KF718983.1:3887-3984	37	52	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 1B, chloroplastic-like (LOC102589865), mRNA	3.260869565
CLCdnRY4_69858	1	1	1	22	uv|KM062044.1:2507-3208	543	564	Moderate	Moderate	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable xyloglucan endotransglucosylase/hydrolase protein 10 (LOC102596094), mRNA	4.575163399
VdnRY1_30034	1	1	440	456	uv|KJ541672.1:2690-2839	131	115	Weak	Weak	Suspect[457,458];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102601350 (LOC102601350), transcript variant X1, mRNA	3.493449782
CLCdnRY4_13200	1	1	5	20	uv|KF680545.1:1-2837	2508	2493	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599681 (LOC102599681), mRNA	3.27510917
VdnRY1_5464	1	1	1	16	uv|Z29589.1:3211-4486	958	943	Weak	Weak	None	TRUE_BIOLOGICAL	4527	1	PREDICTED: Solanum pennellii uncharacterized LOC107025379 (LOC107025379), mRNA	3.282275711
CLCdnRY2_20604	1	1	418	433	uv|KY031726.1:1-7905	7621	7606	Weak	Weak	Suspect[434,457];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum thioredoxin-related transmembrane protein 2 (LOC102599657), mRNA	3.282275711
VdnRY1_51663	1	1	429	444	uv|JF909482.1:3850-8059	3154	3139	Weak	Weak	Suspect[445,457];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch09, complete genome	3.282275711
SdnRY1_51236	1	1	420	436	uv|KF719005.1:2205-5132	542	526	Weak	Weak	Suspect[1,17];Suspect[437,456];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596433 (LOC102596433), transcript variant X2, mRNA	3.50877193
CLCdnRY10_63682	1	1	6	22	uv|U89936.1:216-503	146	162	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	3.50877193
CLCdnRY7_1014	1	1	5	21	uv|KF719019.1:2203-2843	558	574	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum pennellii 40S ribosomal protein S3a (LOC107031735), mRNA	3.50877193
SdnRY1_51236	1	1	18	33	uv|J02459.1:1-48502-49	41683	41698	Weak	Weak	Suspect[1,17];Suspect[437,456];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596433 (LOC102596433), transcript variant X2, mRNA	3.289473684
CLCdnRY10_56631	1	1	427	442	uv|GU593054.1:6136-8806	230	245	Weak	Weak	Suspect[443,456];	TRUE_BIOLOGICAL	2132	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597967 (LOC102597967), mRNA	3.289473684
CLCdnRY11_50261	1	1	418	433	uv|U89936.1:1117-1464	105	120	Weak	Weak	Suspect[434,456];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum cysteine-rich receptor-like protein kinase 10 (LOC101264083), transcript variant X1, mRNA	3.289473684
CLCdnRY8_23245	1	1	4	19	uv|AF379854.1:3-2710	608	623	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	5820	1	Solanum lycopersicum cultivar I-3 chromosome 12	3.289473684
CLCdnRY11_55969	1	1	1	17	uv|AF379854.1:3-2710	1046	1062	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum nudix hydrolase 8-like (LOC102600629), mRNA	3.516483516
VdnRY2_7889	1	1	422	438	uv|NGB00402.1:2108-3532	1163	1147	Weak	Weak	Suspect[439,455];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	3.516483516
CLCdnRY2_56556	1	1	419	434	uv|KC702193.1:1-1136	870	855	Weak	Weak	Suspect[435,455];	TRUE_ARTIFICIAL	81077	81077		3.296703297
CLCdnRY9_71344	1	1	18	33	uv|U13189.1:9688-10585	705	690	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	3.296703297
SdnRY1_51276	1	1	8	23	uv|KM407512.1:886-4985	2118	2103	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	4930	1	Lycopersicon pimpinellifolium 9DC resistance gene cluster	3.296703297
CLCdnRY1_20500	1	1	424	439	uv|J01783.1:4575-7894-49	3359	3344	Weak	Weak	Suspect[440,455];	TRUE_BIOLOGICAL	561	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-3 (LOC102582957), transcript variant X3, mRNA	3.296703297
CLCdnRY4_28502	1	1	429	444	uv|KC702178.1:1-2022	131	116	Weak	Weak	Suspect[445,455];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum lycopersicum acylamino-acid-releasing enzyme-like (LOC101264860), transcript variant X5, mRNA	3.296703297
VdnRY4_42425	1	1	437	452	uv|JN874480.1:1050-2714	968	953	Weak	Weak	Suspect[453,455];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum pennellii pentatricopeptide repeat-containing protein At4g18975, chloroplastic (LOC107011316), transcript variant X1, mRNA	3.296703297
CLCdnRY3_66345	1	1	437	452	uv|Z50148.1:1-178	60	45	Weak	Weak	Suspect[453,454];	NO_DATA	1	1	Solanum pennellii chromosome ch05, complete genome	3.303964758
CLCdnRY8_164	1	1	419	434	uv|KF718996.1:2914-4532	694	679	Weak	Weak	Suspect[435,454];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 2	3.303964758
VdnRY5_4994	1	1	426	441	uv|DQ883658.3:1-743	469	454	Weak	Weak	Suspect[442,454];	NO_DATA	1	1	PREDICTED: Solanum tuberosum geranylgeranyl transferase type-2 subunit beta-like (LOC102591180), transcript variant X2, mRNA	3.303964758
CLCdnRY1_19853	1	1	1	16	uv|AF379854.1:3-2710	608	623	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	Solanum lycopersicum cultivar I-3 chromosome 12	3.311258278
CLCdnRY7_78	1	1	8	23	uv|KM407505.1:939-2365	617	602	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum photosystem II 22 kDa protein, chloroplastic (LOC102593103), mRNA	3.311258278
VdnRY2_114776	1	1	427	442	uv|EF216318.1:622-720	25	40	Weak	Weak	Suspect[443,453];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum endoglucanase 6-like (LOC102589512), mRNA	3.311258278
VdnRY3_22612	1	1	9	24	uv|JX992843.1:1953-2155	72	87	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum tuberosum autophagy-related protein 2 (LOC102595099), transcript variant X2, mRNA	3.311258278
VdnRY3_22714	1	1	2	17	uv|NGB00051.1:1428-2848	1289	1304	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ras guanine nucleotide exchange factor P (LOC102588911), mRNA	3.311258278
CLCdnRY10_37141	1	1	416	432	uv|AF379854.1:3-2710	1769	1785	Weak	Weak	Suspect[433,452];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum peamaclein-like (LOC102588340), mRNA	3.539823009
SdnRY1_51481	1	1	420	435	uv|NGB00587.1:1-3232	2056	2041	Weak	Weak	Suspect[436,452];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum phosphate transporter PHO1 (LOC102581109), mRNA	3.318584071
VdnRY3_62928	1	1	25	40	uv|X70469.1:1-57	43	28	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (LOC102596865), transcript variant X4, mRNA	3.318584071
CLCdnRY10_54015	1	1	4	22	uv|DQ851853.1:190-377	152	134	Moderate	Moderate	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum F-box protein PP2-A15-like (LOC102596267), mRNA	3.99113082
VdnRY3_72314	1	1	428	445	uv|AY529716.1:752-854	60	77	Weak	Weak	Suspect[446,451];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 10 (LOC102581049), mRNA	3.76940133
CLCdnRY8_30082	1	1	429	445	uv|U55760.1:1-2749	2309	2325	Weak	Weak	Suspect[447,451];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596796 (LOC102596796), mRNA	3.54767184
CLCdnRY3_17076	1	1	432	447	uv|U29899.1:4697-5948	684	669	Weak	Weak	Suspect[448,451];	TRUE_BIOLOGICAL	4892	1	Solanum pennellii chromosome ch12, complete genome	3.32594235
CLCdnRY8_30082	1	1	431	446	uv|U55760.1:1-2749	2314	2329	Weak	Weak	Suspect[447,451];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596796 (LOC102596796), mRNA	3.32594235
VdnRY5_56244	1	1	1	16	uv|J02459.1:1-48502-49	23775	23790	Weak	Weak	None	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596616 (LOC102596616), transcript variant X1, mRNA	3.32594235
CLCdnRY11_63816	1	1	5	20	uv|KF718979.1:2206-6730	481	466	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 11	3.333333333
CLCdnRY12_66813	1	1	17	32	uv|AY568055.1:2172-2270	83	68	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583598 (LOC102583598), mRNA	3.333333333
CLCdnRY2_60721	1	1	13	28	uv|J02459.1:1-48502-49	30587	30602	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch08, complete genome	3.333333333
CLCdnRY7_8969	1	1	24	39	uv|KY031726.1:1-7905	5799	5814	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	82115	1	Kocuria rhizophila strain NCTC8340 genome assembly, chromosome: 1	3.333333333
CLCdnRY7_56381	1	1	1	16	uv|KF718979.1:2206-6730	4219	4234	Weak	Weak	None	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g57250, mitochondrial (LOC102585306), mRNA	3.333333333
SdnRY1_51677	1	1	13	31	uv|AF379854.1:3-2710	694	712	Moderate	Moderate	Suspect[1,12];	TRUE_BIOLOGICAL	5820	1	Solanum pennellii chromosome ch10, complete genome	4.008908686
CLCdnRY5_51197	1	1	5	23	uv|U47120.2:791-908	68	50	Moderate	Moderate	Suspect[1,4];	NO_DATA	1	1	Schwenckfeldina sp. MAB-2008 28S ribosomal RNA gene, partial sequence	4.008908686
VdnRY4_71981	1	1	428	444	uv|AF379854.1:3-2710	2375	2359	Weak	Weak	Suspect[445,449];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum 2,3-dimethylmalate lyase-like (LOC102580274), mRNA	3.563474388
SdnRY1_51695	1	1	4	19	uv|AF310136.1:497-2034	488	503	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	2	1	Solanum tuberosum chromosome 5 clone RH072I03, complete sequence	3.340757238
VdnRY3_6779	1	1	9	24	uv|NGB00587.1:1-3232	726	711	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	3.340757238
PBdnRY1_11397	1	1	4	20	uv|JF909482.1:3850-8059	3570	3586	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102603639 (LOC102603639), mRNA	3.571428571
CLCdnRY10_62511	1	1	429	444	uv|X70276.1:4179-4959	30	45	Weak	Weak	Suspect[445,448];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107059583 (LOC107059583), ncRNA	3.348214286
VdnRY3_31548	1	1	417	432	uv|KF718979.1:2206-6730	1585	1570	Weak	Weak	Suspect[433,448];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum lycopersicum GATA transcription factor 26-like (LOC101246747), mRNA	3.348214286
CLCdnRY10_29099	1	1	410	427	uv|KC702228.1:1-1023	562	579	Weak	Weak	Suspect[428,447];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum putative UPF0481 protein At3g02645 (LOC102605914), mRNA	3.803131991
CLCdnRY4_29076	1	1	410	427	uv|KC702228.1:1-1023	562	579	Weak	Weak	Suspect[428,447];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum putative UPF0481 protein At3g02645 (LOC102605914), mRNA	3.803131991
CLCdnRY10_57293	1	1	19	34	uv|JF909482.1:3850-8059	2627	2612	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum proline-, glutamic acid- and leucine-rich protein 1 (LOC102604681), mRNA	3.355704698
CLCdnRY10_60149	1	1	11	26	uv|U30497.1:3230-4814	617	602	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein indeterminate-domain 2-like (LOC102603226), mRNA	3.355704698
CLCdnRY5_64242	1	1	5	20	uv|KF718979.1:2206-6730	481	466	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 11	3.355704698
SdnRY1_51788	1	1	25	40	uv|KC702236.1:1-1024	876	891	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC102602598), transcript variant X2, mRNA	3.355704698
VdnRY2_77264	1	1	10	25	uv|DQ391279.1:13402-14600	1181	1196	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum trihelix transcription factor GT-2-like (LOC102597646), mRNA	3.3632287
CLCdnRY3_52836	1	1	423	438	uv|KC702211.1:1-536	253	238	Weak	Weak	Suspect[439,446];	TRUE_ARTIFICIAL	81077	81077	Solanum pennellii chromosome ch02, complete genome	3.3632287
VdnRY2_39452	1	1	25	41	uv|U80929.2:2715-2856	48	64	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602661 (LOC102602661), ncRNA	3.595505618
CLCdnRY3_52512	1	1	13	29	uv|M98046.1:2386-3803	848	832	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum carbon catabolite repressor protein 4 homolog 6 (LOC101244977), transcript variant X3, mRNA	3.595505618
VdnRY1_87823	1	1	407	423	uv|JX310867.1:868-3760	190	206	Weak	Weak	Suspect[424,445];	TRUE_BIOLOGICAL	1224	1	PREDICTED: Solanum tuberosum peptidyl-tRNA hydrolase 2, mitochondrial (LOC102590934), transcript variant X2, mRNA	3.595505618
VdnRY3_39537	1	1	21	37	uv|AY217101.1:3918-4201	198	214	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum lisH domain and HEAT repeat-containing protein KIAA1468 homolog (LOC102582556), transcript variant X1, mRNA	3.595505618
CLCdnRY12_67473	1	1	425	440	uv|L08862.1:1-2039	296	281	Weak	Weak	Suspect[441,445];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum exocyst complex component EXO70B1-like (LOC102590396), mRNA	3.370786517
CLCdnRY3_17666	1	1	407	422	uv|U89961.1:1-4240	225	240	Weak	Weak	Suspect[423,445];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch04, complete genome	3.370786517
SdnRY1_51885	1	1	20	35	uv|KF853601.1:1021-3588	1583	1568	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	7711	1	Solanum lycopersicum cultivar I-3 chromosome 7	3.370786517
VdnRY1_134115	1	1	411	426	uv|U09365.1:1592-3128	866	881	Weak	Weak	Suspect[427,445];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein FAR1-RELATED SEQUENCE 6 (LOC102599522), transcript variant X2, mRNA	3.370786517
SdnRY1_51948	1	1	23	40	uv|U13843.1:1-1126	1056	1039	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	9989	1	PREDICTED: Solanum tuberosum transcription factor VIP1 (LOC102579710), mRNA	3.828828829
VdnRY1_41764	1	1	23	38	uv|M29363.1:3595-3692	39	24	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	3.378378378
CLCdnRY4_55737	1	1	415	430	uv|GU593054.1:6136-8806	230	245	Weak	Weak	Suspect[431,444];	TRUE_BIOLOGICAL	2132	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597967 (LOC102597967), mRNA	3.378378378
VdnRY1_15944	1	1	407	422	uv|AF025844.2:1-1301	1210	1195	Weak	Weak	Suspect[423,444];	TRUE_BIOLOGICAL	6134	1	Solanum lycopersicum chromosome ch07, complete genome	3.378378378
VdnRY1_57085	1	1	8	23	uv|KY031735.1:1-4680	1069	1054	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum ABSCISIC ACID-INSENSITIVE 5-like protein 7 (LOC102581652), transcript variant X2, mRNA	3.378378378
SdnRY1_52059	1	1	16	32	uv|X70481.1:3564-4492	256	240	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107063455 (LOC107063455), transcript variant X3, ncRNA	3.611738149
CLCdnRY8_58602	1	1	409	424	uv|U55760.1:1-2749	2217	2232	Weak	Weak	Suspect[425,443];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589547 (LOC102589547), mRNA	3.386004515
VdnRY3_68029	1	1	2	17	uv|U30497.1:3230-4814	419	404	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g66520-like (LOC102601105), mRNA	3.386004515
VdnRY7_15431	1	1	424	439	uv|JX025642.1:5090-5607	229	244	Weak	Weak	Suspect[440,443];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588001 (LOC102588001), mRNA	3.386004515
CLCdnRY4_6231	1	1	9	24	uv|KC503965.1:3195-3771-42	116	131	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	1224	1	Solanum pennellii chromosome ch03, complete genome	3.393665158
VdnRY2_89856	1	1	409	424	uv|M18804.1:259-389	61	46	Weak	Weak	Suspect[425,442];	TRUE_BIOLOGICAL	153135	1	Solanum lycopersicum cultivar I-3 chromosome 1	3.393665158
VdnRY3_31549	1	1	411	426	uv|KF718979.1:2206-6730	1585	1570	Weak	Weak	Suspect[427,442];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum lycopersicum GATA transcription factor 26-like (LOC101246747), mRNA	3.393665158
VdnRY5_22057	1	1	410	425	uv|U59231.1:5103-7490	2000	2015	Weak	Weak	Suspect[426,442];	TRUE_BIOLOGICAL	5658	1	PREDICTED: Solanum tuberosum glutaredoxin domain-containing cysteine-rich protein 1 (LOC102606278), mRNA	3.393665158
VdnRY3_41397	1	1	12	29	uv|KF718972.1:1283-1552	123	140	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum serine/arginine repetitive matrix protein 2 (LOC102590127), transcript variant X5, mRNA	3.854875283
CLCdnRY11_31913	1	1	419	434	uv|AF379854.1:4263-5841	1184	1169	Weak	Weak	Suspect[435,441];	NO_DATA	1	1	PREDICTED: Solanum tuberosum auxin-induced protein 15A-like (LOC102590858), mRNA	3.401360544
CLCdnRY1_19843	1	1	4	19	uv|U89960.1:1471-2257	782	767	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579566 (LOC102579566), mRNA	3.401360544
VdnRY2_88029	1	1	15	30	uv|X70469.1:1-57	43	28	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (LOC102596865), transcript variant X4, mRNA	3.401360544
CLCdnRY12_78050	1	1	3	18	uv|U67875.1:8796-9922	1000	985	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592637 (LOC102592637), transcript variant X2, ncRNA	3.401360544
CLCdnRY5_22733	1	1	413	428	uv|KC702202.1:1-1020	588	603	Weak	Weak	Suspect[429,441];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581052 (LOC102581052), mRNA	3.401360544
CLCdnRY1_20253	1	1	6	22	uv|U02436.1:3152-4436	844	828	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102594173 (LOC102594173), mRNA	3.636363636
VdnRY1_23447	1	1	411	426	uv|KF718989.1:2199-3181	126	111	Weak	Weak	Suspect[427,440];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum protein N-lysine methyltransferase METTL21A (LOC102604015), mRNA	3.409090909
CLCdnRY6_46267	1	1	425	440	uv|HM162846.2:614-1656	617	602	Weak	Weak	None	TRUE_BIOLOGICAL	5690	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583214 (LOC102583214), mRNA	3.409090909
VdnRY1_59113	1	1	1	16	uv|LC121520.1:4008-4664	243	258	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum 37S ribosomal protein S9, mitochondrial (LOC102587067), mRNA	3.409090909
VdnRY6_12196	1	1	419	434	uv|KF719005.1:2205-5132	1663	1648	Weak	Weak	Suspect[435,440];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum delta(12) oleic acid desaturase FAD2-like (LOC102598608), mRNA	3.409090909
CLCdnRY10_3208	1	1	21	38	uv|KF718995.1:2216-3853	1559	1542	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum decapping nuclease DXO homolog, chloroplastic (LOC102587755), transcript variant X2, mRNA	3.872437358
SdnRY1_52322	1	1	407	422	uv|KC503965.1:3195-3771-42	386	401	Weak	Weak	Suspect[423,439];	TRUE_BIOLOGICAL	1224	1	PREDICTED: Solanum tuberosum putative disease resistance protein RGA4 (LOC102589061), transcript variant X2, mRNA	3.416856492
VdnRY2_60788	1	1	420	435	uv|KC702183.1:1-1023	920	905	Weak	Weak	Suspect[436,439];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum protein PHYTOCHROME KINASE SUBSTRATE 4 (LOC102601310), mRNA	3.416856492
CLCdnRY1_45764	1	1	420	436	uv|JF909481.1:3855-5640	1089	1105	Weak	Weak	Suspect[437,438];	NO_DATA	1	1	PREDICTED: Solanum pennellii F-box/FBD/LRR-repeat protein At1g13570-like (LOC107021872), mRNA	3.652968037
CLCdnRY12_29886	1	1	418	433	uv|U13843.1:1887-9923	5885	5900	Weak	Weak	Suspect[434,438];	TRUE_BIOLOGICAL	325454	1	Solanum lycopersicum cultivar I-3 chromosome 1	3.424657534
CLCdnRY11_56547	1	1	2	17	uv|AF379854.1:3-2710	1918	1903	Weak	Weak	Suspect[1,1];	NO_DATA	1	1		3.424657534
CLCdnRY12_49427	1	1	5	20	uv|KC702171.1:1-1136	902	917	Weak	Weak	Suspect[1,4];	TRUE_ARTIFICIAL	81077	81077	Solanum tuberosum cultivar Russet Burbank eukaryotic translation initiation factor 4E (eIF4E) mRNA, complete cds	3.424657534
CLCdnRY2_2477	1	1	418	433	uv|AF076311.1:690-787	55	70	Weak	Weak	Suspect[435,438];	NO_DATA	1	1	Solanum tuberosum proteasome-like protein alpha subunit (LOC102577646), mRNA<>Solanum tuberosum clone 149D10 proteasome-like protein alpha subunit mRNA, complete cds	3.424657534
CLCdnRY2_2477	1	1	419	434	uv|FJ750580.1:2379-2529	48	63	Weak	Weak	Suspect[435,438];	NO_DATA	1	1	Solanum tuberosum proteasome-like protein alpha subunit (LOC102577646), mRNA<>Solanum tuberosum clone 149D10 proteasome-like protein alpha subunit mRNA, complete cds	3.424657534
SdnRY1_52367	1	1	4	19	uv|M12787.1:700-815	60	75	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585593 (LOC102585593), mRNA	3.424657534
VdnRY1_69520	1	1	17	32	uv|U03498.1:7366-8059	378	363	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107058981 (LOC107058981), ncRNA	3.424657534
VdnRY3_7353	1	1	416	431	uv|JN581374.1:616-2149	237	222	Weak	Weak	Suspect[432,438];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probable nucleoredoxin 1 (LOC102606289), mRNA	3.424657534
CLCdnRY1_46188	1	1	8	24	uv|KF719005.1:2205-5132	2009	2025	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC102604876), transcript variant X6, misc_RNA	3.661327231
CLCdnRY10_2061	1	1	3	19	uv|KF719005.1:2205-5132	2147	2163	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597991 (LOC102597991), transcript variant X2, mRNA	3.661327231
SdnRY1_52416	1	1	405	421	uv|EF456735.1:5025-5175	65	49	Weak	Weak	Suspect[423,437];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062954 (LOC107062954), ncRNA	3.661327231
CLCdnRY3_18579	1	1	16	31	uv|M29589.1:1-173	8	23	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589836 (LOC102589836), transcript variant X1, mRNA	3.432494279
VdnRY1_97133	1	1	421	436	uv|M35007.1:891-982	55	40	Weak	Weak	Suspect[437,437];	NO_DATA	1	1	PREDICTED: Solanum pennellii replication factor C subunit 3 (LOC107020979), mRNA	3.432494279
SdnRY1_52416	1	1	407	422	uv|KF718989.1:2199-3181	90	75	Weak	Weak	Suspect[423,437];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062954 (LOC107062954), ncRNA	3.432494279
VdnRY1_54523	1	1	416	431	uv|KF719005.1:2205-5132	734	749	Weak	Weak	Suspect[432,437];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase EDR1 (LOC102604394), mRNA	3.432494279
VdnRY2_4302	1	1	400	415	uv|M77169.1:820-5161	1469	1454	Weak	Weak	Suspect[416,437];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum acyl-coenzyme A thioesterase 13-like (LOC102585989), mRNA	3.432494279
VdnRY4_40679	1	1	418	433	uv|KC702183.1:1-1023	920	905	Weak	Weak	Suspect[434,437];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum protein PHYTOCHROME KINASE SUBSTRATE 4 (LOC102601310), mRNA	3.432494279
VdnRY1_27304	1	1	412	429	uv|U13843.1:1887-9923	5604	5587	Weak	Weak	Suspect[430,436];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum pennellii probable glycosyltransferase At3g07620 (LOC107003331), mRNA	3.899082569
VdnRY6_39065	1	1	415	431	uv|AF379854.1:3-2710	2375	2359	Weak	Weak	Suspect[432,436];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum 2,3-dimethylmalate lyase-like (LOC102580274), mRNA	3.669724771
VdnRY2_72760	1	1	403	419	uv|M34298.1:3143-4604	601	617	Weak	Weak	Suspect[420,436];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579199 (LOC102579199), ncRNA	3.669724771
VdnRY2_152581	1	1	6	22	uv|U89960.1:4738-7717	2251	2267	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum clathrin light chain 2-like (LOC102585812), mRNA	3.669724771
CLCdnRY10_11106	1	1	8	23	uv|AF379854.1:3-2710	1583	1568	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum SNF1-related protein kinase regulatory subunit beta-3-like (LOC102595708), transcript variant X4, mRNA	3.440366972
CLCdnRY3_33999	1	1	9	24	uv|NGB00026.1:1029-1408	208	223	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum tuberosum BAG family molecular chaperone regulator 6 (LOC102592057), mRNA	3.440366972
CLCdnRY11_86416	1	1	5	20	uv|U13843.1:1887-9923	874	859	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	325454	1	Solanum lycopersicum cultivar I-3 chromosome 6	3.440366972
CLCdnRY12_14609	1	1	18	33	uv|U55760.1:1-2749	2120	2135	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum phenylalanine ammonia-lyase-like (LOC102596343), mRNA	3.440366972
SdnRY1_52472	1	1	1	16	uv|LC121520.1:2705-3093	95	110	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch12, complete genome	3.440366972
SdnRY1_52489	1	1	1	16	uv|KF718989.1:2199-3181	111	126	Weak	Weak	None	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum LRR receptor-like serine/threonine-protein kinase GSO1 (LOC102581827), mRNA	3.440366972
CLCdnRY12_36440	1	1	23	43	uv|KC702228.1:1-1023	627	647	Moderate	Moderate	Suspect[1,22];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum mechanosensitive ion channel protein 2, chloroplastic (LOC102603869), transcript variant X5, mRNA	4.597701149
VdnRY5_36367	1	1	4	20	uv|AF102576.1:7950-8118	116	132	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum wall-associated receptor kinase 3-like (LOC101262780), mRNA	3.67816092
CLCdnRY10_6829	1	1	9	24	uv|KC503965.1:3195-3771-42	116	131	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	1224	1	Solanum pennellii chromosome ch03, complete genome	3.448275862
CLCdnRY1_32476	1	1	6	21	uv|KC702194.1:1-1023	755	740	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 8	3.448275862
VdnRY4_5872	1	1	420	435	uv|JQ394800.1:4781-4893	79	64	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592287 (LOC102592287), transcript variant X3, misc_RNA	3.448275862
CLCdnRY12_39725	1	1	7	23	uv|KM407512.1:886-4985	3237	3253	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum cysteine--tRNA ligase, chloroplastic/mitochondrial (LOC102604325), transcript variant X2, mRNA	3.686635945
CLCdnRY2_5371	1	1	3	18	uv|KY031735.1:1-4680	1269	1284	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	82115	1	Solanum tuberosum Cu/Zn-superoxide dismutase mRNA, partial cds	3.456221198
SdnRY1_52688	1	1	259	299	uv|KF719004.1:2204-2946	73	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS3 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	9.237875289
CLCdnRY1_54750	1	1	3	19	uv|U67875.1:6835-8216	859	875	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	4895	1	Solanum pennellii chromosome ch09, complete genome	3.695150115
CLCdnRY7_29594	1	1	13	28	uv|AB777649.1:1808-4608-49	1116	1101	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1B-13 (LOC107058848), mRNA	3.464203233
VdnRY6_6120	1	1	386	408	uv|JF909482.1:3850-8059	2069	2091	Weak	Weak	Suspect[409,432];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum serine/threonine-protein phosphatase BSL3-like (BSL2), transcript variant X1, mRNA	5.092592593
CLCdnRY2_43280	1	1	16	31	uv|Z46234.1:1-402	156	141	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	4892	1	Solanum demissum chromosome 5 clone PGEC093P17, complete sequence	3.472222222
SdnRY1_52828	1	1	4	19	uv|JF909482.1:3850-8059	1444	1429	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 4	3.472222222
VdnRY1_104412	1	1	20	35	uv|JQ394800.1:1424-1522	38	53	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cell division control protein 2 homolog A-like (LOC102598342), mRNA	3.472222222
SdnRY1_52831	1	1	257	297	uv|KF719004.1:2204-2946	73	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS3 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	9.280742459
CLCdnRY7_59378	1	1	19	35	uv|HM162842.2:1523-1632	108	92	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum lycopersicum uncharacterized LOC104645442 (LOC104645442), ncRNA	3.712296984
CLCdnRY3_50584	1	1	18	33	uv|KF718978.1:2204-3575	767	782	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	3700	1	Solanum lycopersicum chromosome ch05, complete genome	3.480278422
CLCdnRY1_57921	1	1	20	35	uv|U13843.1:1887-9923	2299	2284	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	325454	1	Solanum lycopersicum cultivar I-3 chromosome 4	3.480278422
CLCdnRY3_47516	1	1	4	19	uv|M88476.1:1-88	6	21	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum HVA22-like protein e (LOC102595872), transcript variant X1, mRNA	3.480278422
VdnRY7_185	1	1	394	409	uv|GU593054.1:6136-8806	1447	1432	Weak	Weak	Suspect[410,431];	NO_DATA	1	1	PREDICTED: Solanum tuberosum beta-1,3-galactosyltransferase 7 (LOC102588772), transcript variant X1, mRNA	3.480278422
CLCdnRY7_156	1	1	398	414	uv|AF379854.1:3-2710	1008	1024	Weak	Weak	Suspect[415,430];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum cold and drought-regulated protein CORA-like (LOC102590349), mRNA	3.720930233
VdnRY1_137521	1	1	13	29	uv|JN204887.1:1-998	361	345	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum transmembrane 9 superfamily member 1 (LOC102600734), mRNA	3.720930233
CLCdnRY11_42084	1	1	407	423	uv|KF680544.1:323-942	561	577	Weak	Weak	Suspect[424,430];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	3.720930233
CLCdnRY7_46836	1	1	11	27	uv|JN381160.1:2018-4126	1324	1340	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	Solanum lycopersicum strain Heinz 1706 chromosome 10 clone hba-45f21 map 10, complete sequence	3.720930233
CLCdnRY10_60702	1	1	413	428	uv|U09128.1:3334-10218	169	184	Weak	Weak	Suspect[429,430];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum acetylajmalan esterase-like (LOC102585911), transcript variant X2, mRNA	3.488372093
CLCdnRY11_16829	1	1	414	429	uv|KC702170.1:1-1957	470	455	Weak	Weak	Suspect[430,430];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum SKP1-like protein 1B (LOC102591070), mRNA	3.488372093
SdnRY1_52912	1	1	415	430	uv|X05261.1:1-181	69	84	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum lycopersicum leucine-rich repeat protein kinase family protein (LOC101244667), mRNA	3.488372093
VdnRY1_41767	1	1	23	38	uv|M29363.1:3595-3692	39	24	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	3.488372093
VdnRY1_1656	1	1	194	245	uv|KF719004.1:2204-2946	62	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 1, chloroplastic-like (LOC102577450), mRNA	11.88811189
CLCdnRY1_12366	1	1	12	28	uv|EF694056.1:1-945	729	713	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ras-related protein RABA1f (LOC102591005), mRNA	3.72960373
CLCdnRY11_77158	1	1	24	40	uv|EF036511.1:4679-4770	53	69	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative pentatricopeptide repeat-containing protein At1g74580 (LOC102585346), transcript variant X1, mRNA	3.72960373
VdnRY2_10546	1	1	404	419	uv|KM407512.1:886-4985	2874	2859	Weak	Weak	Suspect[420,429];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum upstream activation factor subunit spp27-like (LOC102599905), transcript variant X2, mRNA	3.496503497
CLCdnRY5_44922	1	1	25	40	uv|NGB00813.1:1-63	41	26	Weak	Weak	Suspect[1,24];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum pennellii proliferating cell nuclear antigen (LOC107023890), mRNA	3.496503497
SdnRY1_52972	1	1	403	418	uv|KF853602.1:1019-2932	716	731	Weak	Weak	Suspect[419,429];	TRUE_BIOLOGICAL	7711	1	Solanum tuberosum clone 087B08 ADP,ATP carrier protein precursor-like mRNA, complete cds	3.496503497
VdnRY4_14058	1	1	13	28	uv|KF811459.1:1014-1106	74	59	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum glucan endo-1,3-beta-glucosidase 14-like (LOC102587570), mRNA	3.504672897
VdnRY4_67629	1	1	19	34	uv|LC121524.1:7013-8404-8	1361	1346	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596587 (LOC102596587), transcript variant X3, mRNA	3.504672897
SdnRY1_53130	1	1	253	293	uv|KF719004.1:2204-2946	73	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS3 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	9.367681499
SdnRY1_53131	1	1	253	293	uv|KF719004.1:2204-2946	73	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS3 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	9.367681499
VdnRY3_72315	1	1	404	421	uv|AY529716.1:752-854	60	77	Weak	Weak	Suspect[422,427];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 10 (LOC102581049), mRNA	3.981264637
VdnRY1_112898	1	1	24	41	uv|M35007.1:5507-6428	121	104	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596171 (LOC102596171), mRNA	3.981264637
CLCdnRY12_7572	1	1	391	407	uv|KF718974.2:698-2126	1297	1281	Weak	Weak	Suspect[408,427];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum DAG protein, chloroplastic (LOC102597199), mRNA	3.7470726
CLCdnRY10_45531	1	1	23	38	uv|JX560397.1:83-5970	4416	4431	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum cysteine-rich receptor-like protein kinase 2 (LOC102594780), transcript variant X8, mRNA	3.512880562
VdnRY1_26592	1	1	393	408	uv|U89961.1:1-4240	2303	2318	Weak	Weak	Suspect[420,427];	TRUE_BIOLOGICAL	4930	1		3.512880562
VdnRY1_26592	1	1	404	419	uv|M16192.1:1-2517-49	1491	1476	Weak	Weak	Suspect[420,427];	TRUE_BIOLOGICAL	1279	1		3.512880562
VdnRY1_103977	1	1	395	410	uv|KM407506.1:2354-4632	584	569	Weak	Weak	Suspect[411,427];	TRUE_BIOLOGICAL	4930	1	Solanum chacoense isolate SC3-12 chloroplast, complete genome	3.512880562
VdnRY3_20031	1	1	15	30	uv|GU827641.1:1944-2103	49	64	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600332 (LOC102600332), transcript variant X2, mRNA	3.512880562
SdnRY1_53206	1	1	252	292	uv|KF719004.1:2204-2946	73	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS3 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	9.389671362
SdnRY1_53207	1	1	252	292	uv|KF719004.1:2204-2946	73	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS3 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	9.389671362
SdnRY1_53244	1	1	404	419	uv|FM991887.1:2667-2707-49	66	81	Weak	Weak	Suspect[420,426];	NO_DATA	1	1	Solanum pennellii chromosome ch12, complete genome	3.521126761
VdnRY4_40417	1	1	395	410	uv|KY031724.1:1-5301	268	283	Weak	Weak	Suspect[411,426];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum lycopersicum leucine-rich repeat receptor kinase RGFR3-like protein (LOC101244788), mRNA	3.521126761
VdnRY6_29374	1	1	408	423	uv|KF718990.1:2209-4765	1885	1870	Weak	Weak	Suspect[424,426];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum tuberosum receptor-like kinase TMK4 (LOC102599434), mRNA	3.521126761
SdnRY1_53347	1	1	12	27	uv|AF237704.1:5192-5677	186	201	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	3.529411765
CLCdnRY5_4966	1	1	19	34	uv|AF379854.1:3-2710	439	424	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum ubiquitin-like protein ATG12 (LOC102587445), transcript variant X1, mRNA	3.529411765
CLCdnRY9_57799	1	1	8	23	uv|KY031726.1:1-7905	4960	4975	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At4g19220, mitochondrial (LOC107063138), mRNA	3.529411765
CLCdnRY9_4931	1	1	17	34	uv|JF909482.1:3850-8059	3758	3775	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum suberization-associated anionic peroxidase 2-like (LOC102583921), mRNA	4.009433962
CLCdnRY11_68811	1	1	16	31	uv|AY568055.1:6692-7837	142	157	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102603960 (LOC102603960), mRNA	3.537735849
VdnRY1_117239	1	1	6	21	uv|LC121520.1:2705-3093	293	308	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600983 (LOC102600983), mRNA	3.537735849
VdnRY1_38933	1	1	386	401	uv|JN204883.1:1-1492	594	579	Weak	Weak	Suspect[402,424];	NO_DATA	1	1	PREDICTED: Solanum tuberosum heat shock factor protein HSF8 (LOC102591896), transcript variant X2, mRNA	3.537735849
CLCdnRY1_9944	1	1	3	20	uv|JF909482.1:3850-8059	1578	1595	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch03, complete genome	4.01891253
CLCdnRY1_11257	1	1	23	39	uv|AF379854.1:4263-5841	279	263	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 1.2-like (LOC102581453), mRNA	3.78250591
CLCdnRY3_33938	1	1	21	36	uv|EU546814.1:7770-7919	47	62	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum sericin-1-like (LOC107057823), mRNA	3.546099291
CLCdnRY4_42394	1	1	386	401	uv|LC121520.1:4008-4664	258	243	Weak	Weak	Suspect[402,423];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum 37S ribosomal protein S9, mitochondrial (LOC102587067), mRNA	3.546099291
VdnRY1_16165	1	1	404	419	uv|U89930.1:826-1212	167	182	Weak	Weak	Suspect[420,423];	TRUE_BIOLOGICAL	620	1	Solanum tuberosum mRNA for putative glycosyltransferase (x34.2 gene)	3.546099291
CLCdnRY10_802	1	1	406	421	uv|U09128.1:3334-10218	1634	1649	Weak	Weak	Suspect[422,423];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum ATP synthase subunit delta, chloroplastic (LOC102598933), mRNA	3.546099291
VdnRY1_6429	1	1	1	17	uv|J02459.1:1-48502-49	21629	21645	Weak	Weak	None	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum sodium channel modifier 1-like (LOC102598841), transcript variant X1, mRNA	3.791469194
CLCdnRY11_48069	1	1	394	409	uv|KC702199.1:1-273	226	241	Weak	Weak	Suspect[410,422];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum putative disease resistance protein RGA3 (LOC102601499), mRNA	3.55450237
CLCdnRY2_15562	1	1	15	30	uv|M34305.1:3197-4538	1135	1120	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1B-12 (LOC102585344), transcript variant X16, mRNA	3.55450237
CLCdnRY2_15562	1	1	22	37	uv|AY532632.1:5216-5418	124	109	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1B-12 (LOC102585344), transcript variant X16, mRNA	3.55450237
VdnRY2_57401	1	1	398	413	uv|AF129072.1:907-3477	1798	1813	Weak	Weak	Suspect[414,422];	NO_DATA	1	1	PREDICTED: Solanum tuberosum alanine aminotransferase 2-like (LOC102588758), transcript variant X2, mRNA	3.55450237
VdnRY2_64895	1	1	398	413	uv|FJ931533.1:7978-12753-49	2029	2014	Weak	Weak	Suspect[414,422];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum kinesin-4-like (LOC102580904), mRNA	3.55450237
VdnRY4_16097	1	1	4	20	uv|U03498.1:4566-4750	4	20	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102598575), transcript variant X3, mRNA	3.800475059
CLCdnRY1_55246	1	1	405	420	uv|KM407512.1:886-4985	2438	2453	Weak	Weak	Suspect[421,421];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592220 (LOC102592220), transcript variant X3, mRNA	3.562945368
VdnRY2_113450	1	1	401	416	uv|AF310136.1:4127-5198	463	478	Weak	Weak	Suspect[417,421];	TRUE_BIOLOGICAL	620	1	PREDICTED: Nicotiana tabacum uncharacterized LOC107829545 (LOC107829545), mRNA	3.562945368
SdnRY1_53594	1	1	25	40	uv|KF718989.1:2199-3181	108	123	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum plastocyanin, chloroplastic (LOC102583807), mRNA	3.562945368
SdnRY1_53622	1	1	385	400	uv|KF718978.1:2204-3575	413	428	Weak	Weak	Suspect[401,421];	TRUE_BIOLOGICAL	3700	1	Solanum demissum R8 gene cluster, partial sequence	3.562945368
VdnRY6_8959	1	1	383	398	uv|JF909481.1:3855-5640	1665	1650	Weak	Weak	Suspect[399,421];	NO_DATA	1	1	Solanum tuberosum linoleate 13S-lipoxygenase 2-1, chloroplastic-like (LOC102596122), mRNA<>S.tuberosum mRNA for 13-lipoxygenase, clone H1	3.562945368
CLCdnRY7_67356	1	1	397	414	uv|KY031726.1:1-7905	2864	2881	Weak	Weak	Suspect[415,420];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum subtilisin-like protease SBT1.2 (LOC102591055), mRNA	4.047619048
SdnRY1_53676	1	1	1	17	uv|AF028837.1:233-521	150	166	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum tetra-peptide repeat homeobox protein 1-like (LOC107062827), transcript variant X2, mRNA	3.80952381
VdnRY5_31244	1	1	25	41	uv|JN874480.1:1050-2714	269	285	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum transcription factor bHLH104-like (LOC102594250), mRNA	3.80952381
VdnRY2_38310	1	1	384	399	uv|AF237704.1:4412-4593	116	101	Weak	Weak	Suspect[400,420];	NO_DATA	1	1	PREDICTED: Solanum tuberosum transcription factor RF2b-like (LOC102581906), mRNA	3.571428571
CLCdnRY12_86671	1	1	400	415	uv|FJ931533.1:7978-12753-49	4068	4083	Weak	Weak	Suspect[416,420];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum acanthoscurrin-1-like (LOC102590942), mRNA	3.571428571
CLCdnRY2_53991	1	1	1	16	uv|J02459.1:1-48502-49	27515	27500	Weak	Weak	None	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-10 (LOC102590501), mRNA	3.571428571
CLCdnRY1_29677	1	1	397	414	uv|X70481.1:3564-4492	549	566	Weak	Weak	Suspect[415,419];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 9	4.057279236
CLCdnRY3_31040	1	1	388	404	uv|FJ710109.1:6726-9221	2202	2218	Weak	Weak	Suspect[405,419];	TRUE_BIOLOGICAL	10375	1	PREDICTED: Solanum tuberosum transcription factor TCP4-like (LOC102578818), mRNA	3.818615752
VdnRY6_16702	1	1	387	402	uv|U42371.1:920-1342	130	115	Weak	Weak	Suspect[403,419];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum small ubiquitin-related modifier 1-like (LOC102593982), mRNA	3.579952267
SdnRY1_53827	1	1	225	265	uv|KF719004.1:2204-2946	73	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS3 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	9.56937799
CLCdnRY11_29879	1	1	10	32	uv|U67875.1:18-1316	863	885	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597274 (LOC102597274), transcript variant X3, mRNA	5.263157895
VdnRY1_28390	1	1	386	403	uv|L05081.1:2594-3343	83	66	Weak	Weak	Suspect[404,418];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein LURP-one-related 10-like (LOC102601536), mRNA	4.066985646
CLCdnRY2_5507	1	1	16	31	uv|NGB00035.1:5128-5231	15	30	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch04, complete genome	3.588516746
VdnRY1_144670	1	1	386	401	uv|J02459.1:1-48502-49	17849	17864	Weak	Weak	Suspect[402,418];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604949 (LOC102604949), transcript variant X2, mRNA	3.588516746
CLCdnRY1_39626	1	1	379	396	uv|L05669.1:1-1770	1530	1547	Weak	Weak	Suspect[397,417];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g13600-like (LOC102582858), transcript variant X1, mRNA	4.076738609
VdnRY1_40672	1	1	24	40	uv|DQ188843.1:1734-2619	24	40	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum GPI transamidase component PIG-S (LOC102592961), mRNA	3.836930456
CLCdnRY12_59633	1	1	18	33	uv|GU827641.1:1944-2103	65	50	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107058734 (LOC107058734), mRNA	3.597122302
CLCdnRY8_8396	1	1	16	31	uv|M77169.1:820-5161	2452	2437	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum uncharacterized LOC102603076 (LOC102603076), mRNA	3.597122302
SdnRY1_54008	1	1	12	28	uv|X13003.1:2753-4028	1171	1187	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	561	1	PREDICTED: Solanum tuberosum DDT domain-containing protein DDB_G0282237 (LOC102600126), mRNA	3.846153846
CLCdnRY3_661	1	1	7	22	uv|KF719005.1:2205-5132	2532	2547	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum peptide methionine sulfoxide reductase B1, chloroplastic (LOC102591898), transcript variant X2, mRNA	3.605769231
CLCdnRY3_65896	1	1	400	415	uv|KF718978.1:2204-3575	1272	1257	Weak	Weak	Suspect[416,416];	TRUE_BIOLOGICAL	3700	1	Solanum pennellii chromosome ch06, complete genome	3.605769231
CLCdnRY10_66372	1	1	16	31	uv|DQ391279.1:1-10285	3419	3434	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum cysteine-rich receptor-like protein kinase 10 (LOC102603268), transcript variant X2, mRNA	3.605769231
CLCdnRY11_70592	1	1	1	16	uv|NGB00403.1:1-1303	764	779	Weak	Weak	None	TRUE_BIOLOGICAL	91347	1	Solanum pennellii chromosome ch10, complete genome	3.605769231
CLCdnRY12_15512	1	1	16	31	uv|AF519766.1:2372-2991	503	518	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	Solanum tuberosum cultivar Lemhi UDP-glucose:solanidine glucosyltransferase (Sgt2) mRNA, Sgt2.1 allele, complete cds	3.605769231
VdnRY1_104272	1	1	15	30	uv|JN874480.1:6795-9434	315	330	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102594852 (LOC102594852), mRNA	3.605769231
VdnRY3_32701	1	1	32	48	uv|AF327712.1:1582-7289	4217	4233	None	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum NEDD8-conjugating enzyme Ubc12-like (LOC102598117), transcript variant X2, mRNA	3.855421687
VdnRY3_32701	1	1	24	39	uv|KF718989.1:2199-3181	91	76	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum NEDD8-conjugating enzyme Ubc12-like (LOC102598117), transcript variant X2, mRNA	3.614457831
VdnRY6_38827	1	1	388	403	uv|KF718979.1:2206-6730	1313	1298	Weak	Weak	Suspect[404,415];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum U-box domain-containing protein 40 (LOC102580324), mRNA	3.614457831
VdnRY7_18505	1	1	3	18	uv|U42371.1:920-1342	348	333	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum ATP synthase subunit delta', mitochondrial-like (LOC102594486), mRNA	3.614457831
CLCdnRY10_17559	1	1	181	233	uv|KF719004.1:2204-2946	61	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS3 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	12.56038647
CLCdnRY7_2808	1	1	392	413	uv|U59231.1:8434-10310-48	1233	1212	Weak	Weak	Suspect[414,414];	TRUE_BIOLOGICAL	5658	1	PREDICTED: Solanum tuberosum uncharacterized protein At5g39570 (LOC102603773), mRNA	5.072463768
VdnRY2_38600	1	1	383	398	uv|KF718979.1:2206-6730	1585	1570	Weak	Weak	Suspect[399,414];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum GATA transcription factor 26-like (LOC102593619), mRNA	3.623188406
SdnRY1_54138	1	1	379	394	uv|JF909481.1:3855-5640	1104	1089	Weak	Weak	Suspect[395,414];	NO_DATA	1	1	PREDICTED: Solanum tuberosum BRCT domain-containing protein At4g02110-like (LOC102603882), mRNA	3.623188406
CLCdnRY8_15115	1	1	17	32	uv|NGB00055.1:1-1950	1086	1071	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum chorismate synthase 2, chloroplastic (LOC102580455), transcript variant X2, mRNA	3.631961259
VdnRY3_22760	1	1	21	36	uv|JX560397.1:83-5970	5395	5380	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	29487	1	Solanum demissum R8 gene cluster, partial sequence	3.631961259
CLCdnRY10_21174	1	1	13	28	uv|KF853602.1:1019-2932	1473	1488	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600551 (LOC102600551), transcript variant X2, mRNA	3.631961259
CLCdnRY11_45542	1	1	397	412	uv|U67875.1:18-1316	338	353	Weak	Weak	Suspect[413,413];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum pennellii deacetoxyvindoline 4-hydroxylase-like (LOC107031730), transcript variant X2, mRNA	3.631961259
CLCdnRY5_46108	1	1	397	412	uv|U67875.1:18-1316	338	353	Weak	Weak	Suspect[413,413];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum pennellii deacetoxyvindoline 4-hydroxylase-like (LOC107031730), transcript variant X1, mRNA	3.631961259
CLCdnRY6_38919	1	1	10	25	uv|NGB00403.1:1-1303	583	598	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586986 (LOC102586986), mRNA	3.631961259
VdnRY1_22501	1	1	9	24	uv|HM162842.2:1904-2262	34	49	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum probable 2-carboxy-D-arabinitol-1-phosphatase (LOC102592219), mRNA	3.631961259
VdnRY3_29405	1	1	394	411	uv|L08862.1:1-2039	688	671	Weak	Weak	Suspect[412,412];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum developmentally-regulated G-protein 1-like (LOC102605365), mRNA	4.126213592
CLCdnRY9_51320	1	1	17	33	uv|EF456735.1:5025-5175	49	65	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107063504 (LOC107063504), mRNA	3.883495146
VdnRY4_31294	1	1	7	23	uv|Z22761.1:1-5585	3413	3429	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	153135	1	PREDICTED: Solanum tuberosum heat shock cognate 70 kDa protein 2-like (LOC102580808), mRNA	3.883495146
CLCdnRY2_933	1	1	385	400	uv|NGB00729.1:1-51	15	30	Weak	Weak	Suspect[401,412];	TRUE_ARTIFICIAL	81077	81077	Solanum pennellii chromosome ch10, complete genome	3.640776699
CLCdnRY6_8408	1	1	21	36	uv|DQ391279.1:1-10285	9287	9272	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum uncharacterized LOC102603152 (LOC102603152), mRNA	3.640776699
CLCdnRY9_51320	1	1	16	31	uv|KF718989.1:2199-3181	75	90	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum uncharacterized LOC107063504 (LOC107063504), mRNA	3.640776699
VdnRY1_69584	1	1	19	34	uv|AF102576.1:7950-8118	118	103	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	PREDICTED: Solanum tuberosum vacuolar protein sorting-associated protein 18 homolog (LOC102603014), transcript variant X4, mRNA	3.640776699
VdnRY2_38158	1	1	375	390	uv|EF036511.1:4414-4577	146	161	Weak	Weak	Suspect[391,412];	TRUE_BIOLOGICAL	140052	1	PREDICTED: Solanum tuberosum probable E3 ubiquitin-protein ligase RHA2B (LOC107059125), mRNA	3.640776699
CLCdnRY1_30034	1	1	3	23	uv|AF379854.1:3-2710	1369	1389	Moderate	Moderate	Suspect[1,2];	TRUE_BIOLOGICAL	5820	1	Solanum demissum chromosome 11 clone PGEC589, complete sequence	4.866180049
SdnRY1_54406	1	1	10	27	uv|NGB00051.1:1428-2848	1307	1290	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	Solanum pennellii chromosome ch12, complete genome	4.136253041
SdnRY1_54338	1	1	1	17	uv|AF028837.1:233-521	150	166	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum tetra-peptide repeat homeobox protein 1-like (LOC107062827), transcript variant X2, mRNA	3.892944039
SdnRY1_54368	1	1	19	34	uv|JN874480.1:1050-2714	655	670	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum lycopersicum probable mitochondrial adenine nucleotide transporter BTL1 (LOC101262794), transcript variant X2, mRNA	3.649635036
VdnRY5_4774	1	1	6	21	uv|J02459.1:1-48502-49	7180	7195	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588750 (LOC102588750), transcript variant X1, mRNA	3.649635036
CLCdnRY10_49186	1	1	8	23	uv|U13843.1:1-1126	1021	1036	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	9989	1	Solanum tuberosum partial Tvv1 family retrotransposon, clone ST-ROSA54	3.649635036
CLCdnRY12_24701	1	1	387	402	uv|NGB00599.1:1-47	45	30	Weak	Weak	Suspect[403,411];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum protein THYLAKOID ASSEMBLY 8, chloroplastic (LOC101267975), mRNA	3.649635036
CLCdnRY4_65433	1	1	11	26	uv|DQ391279.1:1-10285	3419	3434	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum cysteine-rich receptor-like protein kinase 10 (LOC102603268), transcript variant X2, mRNA	3.649635036
VdnRY4_941	1	1	23	38	uv|JF909481.1:3855-5640	1105	1090	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum histone H3.3 (LOC102587619), mRNA	3.649635036
CLCdnRY6_77248	1	1	12	29	uv|EF456739.1:5683-5787	72	89	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum tetraketide alpha-pyrone reductase 1-like (LOC102601283), transcript variant X1, mRNA	4.146341463
SdnRY1_54427	1	1	13	30	uv|AF379854.1:4263-5841	296	313	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 33 (LOC102594092), mRNA	4.146341463
CLCdnRY3_18259	1	1	384	400	uv|L08862.1:1-2039	1025	1041	Weak	Weak	Suspect[401,410];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum novel plant SNARE 13-like (LOC102592689), mRNA	3.902439024
CLCdnRY12_73906	1	1	10	25	uv|AF327718.1:673-1273	346	361	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	407	1	Solanum tuberosum chromosome 5 mitochondrion, complete sequence	3.658536585
CLCdnRY6_77248	1	1	10	25	uv|AY568055.1:6692-7837	888	903	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum tetraketide alpha-pyrone reductase 1-like (LOC102601283), transcript variant X1, mRNA	3.658536585
CLCdnRY6_40523	1	1	16	31	uv|JF909482.1:3850-8059	1967	1982	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum pennellii nitrilase-like protein 2 (LOC107018517), transcript variant X2, mRNA	3.658536585
VdnRY4_14447	1	1	382	397	uv|DQ666274.1:249-3225	1611	1626	Weak	Weak	Suspect[398,410];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum 60S ribosomal protein L18a-like protein (LOC102586609), mRNA	3.658536585
VdnRY5_30186	1	1	12	27	uv|U47120.2:791-908	81	66	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cytochrome c oxidase assembly protein COX16, mitochondrial (LOC102589896), transcript variant X2, mRNA	3.658536585
CLCdnRY11_52216	1	1	16	31	uv|L08860.1:1858-2910-49	358	373	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch08, complete genome	3.667481663
SdnRY1_54524	1	1	386	401	uv|KC702188.1:1-274	121	106	Weak	Weak	Suspect[402,409];	TRUE_BIOLOGICAL	196118	1		3.667481663
VdnRY1_118517	1	1	24	39	uv|KC702207.1:1-1143	60	75	Weak	Weak	Suspect[1,23];	TRUE_ARTIFICIAL	81077	81077	Solanum lycopersicum cultivar I-3 chromosome 2	3.667481663
VdnRY2_88840	1	1	24	39	uv|KC702207.1:1-1143	60	75	Weak	Weak	Suspect[1,23];	TRUE_ARTIFICIAL	81077	81077	Solanum lycopersicum cultivar I-3 chromosome 2	3.667481663
SdnRY1_54591	1	1	12	29	uv|U09365.1:787-1365	51	34	Weak	Weak	Suspect[1,11];	NO_DATA	1	1		4.166666667
CLCdnRY6_30842	1	1	4	20	uv|KF718979.1:2206-6730	4129	4113	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593823 (LOC102593823), transcript variant X2, mRNA	3.921568627
CLCdnRY10_11128	1	1	1	16	uv|KF718989.1:2199-3181	767	782	Weak	Weak	None	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586920 (LOC102586920), mRNA	3.676470588
CLCdnRY12_43356	1	1	12	27	uv|KM062046.1:2926-3220	131	116	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum replication protein A 70 kDa DNA-binding subunit B-like (LOC102578577), transcript variant X20, mRNA	3.676470588
CLCdnRY4_60554	1	1	370	385	uv|NGB00055.1:1-1950	594	609	Weak	Weak	Suspect[386,408];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum putative F-box/LRR-repeat protein At3g18150 (LOC102595785), transcript variant X2, mRNA	3.676470588
VdnRY1_82311	1	1	18	33	uv|V00604.2:1-6407-49	4316	4331	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578689 (LOC102578689), mRNA	3.676470588
VdnRY5_23553	1	1	18	33	uv|L08860.1:1858-2910-49	1056	1071	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum F-box protein At2g16365-like (LOC102584744), transcript variant X5, misc_RNA	3.676470588
CLCdnRY10_26283	1	1	391	407	uv|U09128.1:3334-10218	5192	5208	Weak	Weak	None	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum inosine-5'-monophosphate dehydrogenase 2-like (LOC102598516), mRNA	3.931203931
VdnRY1_46071	1	1	16	31	uv|KC702216.1:1-1022	138	123	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum nuclear transcription factor Y subunit B-3-like (LOC102588708), mRNA	3.685503686
VdnRY3_95504	1	1	20	35	uv|KC702194.1:1-1023	428	443	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum ABC transporter G family member 11-like (LOC102606102), mRNA	3.685503686
CLCdnRY7_25758	1	1	2	17	uv|X51450.1:2521-3852	981	996	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 8	3.694581281
CLCdnRY9_63628	1	1	387	402	uv|V00604.2:1-6407-49	5249	5264	Weak	Weak	Suspect[403,406];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586538 (LOC102586538), ncRNA	3.694581281
VdnRY3_17213	1	1	367	382	uv|X65279.1:5154-5471	176	161	Weak	Weak	Suspect[383,406];	TRUE_BIOLOGICAL	460517	1	Uncultured fungus clone K-8-14-51 28S ribosomal RNA gene, partial sequence	3.694581281
VdnRY3_27466	1	1	12	27	uv|KC702167.1:1-1135	681	696	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	1386	1	Solanum tuberosum glyceraldehyde 3-phosphate dehydrogenase mRNA, complete cds	3.694581281
VdnRY4_10510	1	1	22	37	uv|KF680544.1:1121-1218	37	52	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable inactive receptor kinase At1g27190 (LOC102582671), mRNA	3.694581281
SdnRY1_54828	1	1	368	384	uv|U09128.1:3334-10218	207	191	Weak	Weak	Suspect[385,405];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588007 (LOC102588007), transcript variant X1, mRNA	3.950617284
SdnRY1_54855	1	1	4	20	uv|EF694056.1:1-945	669	653	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	33090	1	Solanum pennellii chromosome ch09, complete genome	3.950617284
CLCdnRY4_51605	1	1	373	388	uv|KF718991.1:3175-3271	28	43	Weak	Weak	Suspect[389,405];	NO_DATA	1	1	PREDICTED: Solanum pennellii uncharacterized LOC107009110 (LOC107009110), ncRNA	3.703703704
VdnRY1_58637	1	1	382	397	uv|JQ927446.1:4885-6835-49	481	496	Weak	Weak	Suspect[398,405];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596632 (LOC102596632), transcript variant X2, mRNA	3.703703704
VdnRY3_59704	1	1	374	395	uv|AF379854.1:3-2710	2152	2174	Weak	Weak	Suspect[396,404];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probable trehalose-phosphate phosphatase J (LOC102591031), mRNA	5.198019802
SdnRY1_54952	1	1	370	387	uv|KM407505.1:939-2365	489	472	Weak	Weak	Suspect[388,404];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101251336 (LOC101251336), ncRNA	4.207920792
SdnRY1_54953	1	1	370	387	uv|KM407505.1:939-2365	489	472	Weak	Weak	Suspect[388,404];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101251336 (LOC101251336), ncRNA	4.207920792
SdnRY1_54954	1	1	370	387	uv|KM407505.1:939-2365	489	472	Weak	Weak	Suspect[388,404];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101251336 (LOC101251336), ncRNA	4.207920792
CLCdnRY3_57901	1	1	371	387	uv|AY529716.1:5262-5334-49	77	93	Weak	Weak	Suspect[388,404];	NO_DATA	1	1		3.96039604
SdnRY1_54941	1	1	372	388	uv|JF909482.1:3850-8059	2876	2892	Weak	Weak	Suspect[389,404];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch10, complete genome	3.96039604
CLCdnRY1_2557	1	1	13	28	uv|KC702201.1:1-1023	490	505	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 7	3.712871287
CLCdnRY11_41636	1	1	11	26	uv|DQ867071.1:2191-2316	42	57	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum UDP-glucose flavonoid 3-O-glucosyltransferase 7-like (LOC102581928), mRNA	3.712871287
CLCdnRY1_28712	1	1	370	385	uv|JF909467.1:4676-4959	99	114	Weak	Weak	Suspect[386,404];	NO_DATA	1	1	Solanum tuberosum chromosome 7 clone RHPOTKEY128M24, complete sequence	3.712871287
CLCdnRY5_67010	1	1	11	26	uv|DQ867071.1:2191-2316	42	57	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum UDP-glucose flavonoid 3-O-glucosyltransferase 7-like (LOC102581928), mRNA	3.712871287
SdnRY1_54937	1	1	22	37	uv|AF379854.1:4263-5841	278	293	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum auxin-responsive protein IAA3-like (LOC102587488), mRNA	3.712871287
VdnRY4_58054	1	1	8	23	uv|EF694056.1:1-945	240	255	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 1.2-like (LOC102579455), mRNA	3.712871287
CLCdnRY1_59024	1	1	9	25	uv|NGB00402.1:2108-3532	299	315	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g66520-like (LOC102601149), mRNA	3.970223325
CLCdnRY11_73029	1	1	364	379	uv|M35007.1:1-864	99	84	Weak	Weak	Suspect[380,403];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum putative late blight resistance protein homolog R1B-14 (LOC101250509), mRNA	3.722084367
CLCdnRY12_23330	1	1	19	34	uv|AY785149.1:8490-8652-41	131	146	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	PREDICTED: Solanum tuberosum two-component response regulator-like APRR7 (LOC102590489), transcript variant X2, mRNA	3.722084367
SdnRY1_55026	1	1	376	391	uv|KY031736.1:1-4885	1836	1821	Weak	Weak	Suspect[392,403];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592641 (LOC102592641), ncRNA	3.722084367
VdnRY4_20229	1	1	381	396	uv|NGB00587.1:1-3232	2155	2170	Weak	Weak	Suspect[397,403];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum syntaxin-43-like (LOC102593977), mRNA	3.722084367
VdnRY2_148283	1	1	379	402	uv|KJ541667.1:165-247	4	27	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584778 (LOC102584778), mRNA	5.721393035
CLCdnRY3_50030	1	1	370	388	uv|U03454.1:5684-5780	66	48	Moderate	Moderate	Suspect[389,402];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum UDP-N-acetylmuramoylalanine--D-glutamate ligase-like (LOC102582193), mRNA	4.47761194
CLCdnRY4_39552	1	1	16	32	uv|U30497.1:5897-6051	137	153	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	Solanum tuberosum chromosome 5 clone RH072I03, complete sequence	3.980099502
VdnRY4_28785	1	1	372	387	uv|J02400.1:1-5243-49	4998	5013	Weak	Weak	Suspect[388,402];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum rho GTPase-activating protein 5-like (LOC102599543), mRNA	3.731343284
CLCdnRY9_58772	1	1	384	399	uv|M77169.1:820-5161	3874	3889	Weak	Weak	Suspect[400,402];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum putative disease resistance protein RGA4 (LOC102585486), mRNA	3.731343284
CLCdnRY12_52544	1	1	25	41	uv|M18287.1:1-58	44	28	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586802 (LOC102586802), mRNA	3.990024938
SdnRY1_55180	1	1	373	388	uv|KC614689.1:1-590	134	149	Weak	Weak	Suspect[389,401];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 4	3.740648379
CLCdnRY10_42457	1	1	377	392	uv|KM407512.1:886-4985	3415	3430	Weak	Weak	Suspect[393,401];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061934 (LOC107061934), ncRNA	3.740648379
CLCdnRY12_67234	1	1	7	22	uv|J02459.1:1-48502-49	31181	31196	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102603980), mRNA	3.740648379
CLCdnRY3_14385	1	1	25	40	uv|EU048870.1:6860-8251	1349	1364	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	Solanum tuberosum clone 106G11 glycine rich protein-like mRNA, complete cds	3.740648379
VdnRY1_19118	1	1	21	36	uv|JQ394802.1:99-194	41	56	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum protein indeterminate-domain 5, chloroplastic (LOC101254782), transcript variant X3, mRNA	3.740648379
VdnRY1_26660	1	1	380	395	uv|U13189.1:9688-10585	740	725	Weak	Weak	Suspect[396,401];	NO_DATA	1	1	PREDICTED: Solanum tuberosum tubby-like F-box protein 3 (LOC102583347), mRNA	3.740648379
VdnRY1_129142	1	1	373	388	uv|JX560397.1:83-5970	3732	3747	Weak	Weak	Suspect[389,401];	TRUE_BIOLOGICAL	1236	1	Solanum pennellii chromosome ch05, complete genome	3.740648379
VdnRY2_66815	1	1	15	30	uv|HM640258.1:3527-5744	2147	2132	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	Solanum lycopersicum cDNA, clone: LEFL2005E06, HTC in fruit	3.740648379
VdnRY4_12846	1	1	383	398	uv|J02459.1:1-48502-49	10812	10827	Weak	Weak	Suspect[399,401];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase RHF2A-like (LOC102590573), transcript variant X3, mRNA	3.740648379
VdnRY5_44083	1	1	375	390	uv|U09128.1:1-1663	1505	1490	Weak	Weak	Suspect[391,401];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum lycopersicum monogalactosyldiacylglycerol synthase 2, chloroplastic (LOC101263085), transcript variant X2, mRNA	3.740648379
CLCdnRY12_71858	1	1	362	380	uv|KC702170.1:1-1957	343	361	Moderate	Moderate	Suspect[381,400];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum protein DENND6A (LOC102604805), transcript variant X5, mRNA	4.5
VdnRY2_25591	1	1	7	22	uv|KU936037.1:2198-2313	63	78	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596532 (LOC102596532), mRNA	3.75
CLCdnRY1_40172	1	1	383	398	uv|L08851.1:5828-5995	133	118	Weak	Weak	Suspect[399,400];	NO_DATA	1	1	PREDICTED: Solanum pennellii armadillo repeat-containing protein 7 (LOC107016078), transcript variant X2, mRNA	3.75
CLCdnRY5_12096	1	1	5	20	uv|U09128.1:2938-3036	19	34	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4892	1	Solanum lycopersicum cultivar I-3 chromosome 4	3.75
VdnRY1_91699	1	1	7	22	uv|X70469.1:1-57	43	28	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (LOC102596865), transcript variant X4, mRNA	3.75
SdnRY1_55307	1	1	1	17	uv|AF028837.1:233-521	150	166	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum tetra-peptide repeat homeobox protein 1-like (LOC107062827), transcript variant X2, mRNA	4.010025063
VdnRY3_20965	1	1	361	377	uv|KC702177.1:1-1138	571	587	Weak	Weak	Suspect[378,399];	TRUE_ARTIFICIAL	81077	81077	Solanum tuberosum mRNA for TOM7 protein	4.010025063
VdnRY2_13324	1	1	372	387	uv|J02482.1:1-5386-49	3220	3235	Weak	Weak	Suspect[388,399];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060866 (LOC107060866), ncRNA	3.759398496
CLCdnRY4_4633	1	1	4	19	uv|AF519766.1:2372-2991	503	518	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	Solanum tuberosum cultivar Lemhi UDP-glucose:solanidine glucosyltransferase (Sgt2) mRNA, Sgt2.2 allele, complete cds	3.759398496
CLCdnRY8_17646	1	1	364	379	uv|KP899259.1:2190-2518	42	57	Weak	Weak	Suspect[380,399];	TRUE_BIOLOGICAL	629	1	Solanum pennellii chromosome ch03, complete genome	3.759398496
CLCdnRY9_30438	1	1	376	391	uv|KF853602.1:1019-2932	1771	1756	Weak	Weak	Suspect[392,399];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like (LOC102579411), transcript variant X2, mRNA	3.759398496
VdnRY1_67132	1	1	365	380	uv|HQ418395.1:4218-4316	59	44	Weak	Weak	Suspect[381,399];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 3	3.759398496
VdnRY1_118515	1	1	24	39	uv|KC702207.1:1-1143	60	75	Weak	Weak	Suspect[1,23];	TRUE_ARTIFICIAL	81077	81077	Solanum lycopersicum cultivar I-3 chromosome 2	3.759398496
CLCdnRY2_41908	1	1	5	21	uv|KC702228.1:1-1023	51	35	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch07, complete genome	4.020100503
VdnRY1_2994	1	1	374	390	uv|GU593055.1:13024-13902-49	808	824	Weak	Weak	Suspect[391,398];	TRUE_BIOLOGICAL	2093	1	PREDICTED: Solanum tuberosum cytochrome P450 71A1-like (LOC102584170), mRNA	4.020100503
CLCdnRY10_58251	1	1	15	30	uv|JX310868.1:10577-10680	53	38	Weak	Weak	Suspect[1,14];	NO_DATA	1	1		3.768844221
CLCdnRY11_53117	1	1	24	39	uv|M34298.1:3143-4604	294	279	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum auxin-responsive protein SAUR21-like (LOC102601395), mRNA	3.768844221
CLCdnRY1_28548	1	1	359	374	uv|L11060.1:6045-6136	42	57	Weak	Weak	Suspect[375,398];	NO_DATA	1	1	PREDICTED: Solanum pennellii formyltetrahydrofolate deformylase 1, mitochondrial-like (LOC107023666), mRNA	3.768844221
VdnRY1_50810	1	1	1	16	uv|JN874481.1:57-2095	328	343	Weak	Weak	None	TRUE_BIOLOGICAL	3705	1	PREDICTED: Solanum tuberosum putative pentatricopeptide repeat-containing protein At1g02420 (LOC102601203), mRNA	3.768844221
CLCdnRY11_63004	1	1	15	30	uv|JX310868.1:10577-10680	53	38	Weak	Weak	Suspect[1,14];	NO_DATA	1	1		3.768844221
CLCdnRY2_7584	1	1	8	23	uv|KP064031.1:296-391	59	44	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604303 (LOC102604303), mRNA	3.768844221
VdnRY2_41311	1	1	371	389	uv|U14124.1:4742-4833	26	8	Moderate	Moderate	Suspect[390,397];	TRUE_BIOLOGICAL	460517	1	Solanum tuberosum clone RH066A20, complete sequence	4.534005038
CLCdnRY11_30089	1	1	20	36	uv|DQ493881.2:2963-3059	19	35	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum exosome complex exonuclease RRP46 homolog (LOC102597142), mRNA	4.0302267
VdnRY2_77623	1	1	373	389	uv|M16217.1:1-2529	1232	1248	Weak	Weak	Suspect[390,397];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.0302267
VdnRY1_3718	1	1	366	381	uv|NGB00620.1:2470-2656	63	78	Weak	Weak	Suspect[382,397];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum potassium transporter 8-like (LOC102586526), mRNA	3.778337531
CLCdnRY1_23078	1	1	4	19	uv|FJ160466.1:1899-7260-49	4378	4363	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum transmembrane emp24 domain-containing protein p24beta3-like (LOC102593710), mRNA	3.778337531
CLCdnRY1_39593	1	1	24	39	uv|J02459.1:1-48502-49	6932	6917	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	10699	1		3.778337531
CLCdnRY5_1884	1	1	22	37	uv|GU339046.1:3357-4718	1246	1231	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	Solanum tuberosum protease inhibitor-related protein (PI) mRNA, complete cds	3.778337531
VdnRY1_25692	1	1	372	387	uv|KC702192.1:1-523	270	285	Weak	Weak	Suspect[388,397];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum classical arabinogalactan protein 5 (LOC102589511), mRNA	3.778337531
VdnRY3_21799	1	1	12	27	uv|NGB00685.1:1-53	44	29	Weak	Weak	Suspect[1,11];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum sodium/hydrogen exchanger 8-like (LOC102594424), transcript variant X3, mRNA	3.778337531
CLCdnRY1_26274	1	1	24	39	uv|JN204883.1:1-1492	579	594	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum heat shock factor protein HSF8 (LOC102591896), transcript variant X2, mRNA	3.787878788
CLCdnRY12_5442	1	1	5	20	uv|JX560397.1:83-5970	2401	2386	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic (LOC102588177), mRNA	3.787878788
CLCdnRY12_87687	1	1	366	381	uv|J02400.1:1-5243-49	2918	2903	Weak	Weak	Suspect[382,396];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum probable serine/threonine-protein kinase At1g18390 (LOC102602578), transcript variant X3, mRNA	3.787878788
CLCdnRY3_52067	1	1	11	26	uv|U02436.1:1330-2607	984	969	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4930	1		3.787878788
CLCdnRY9_49504	1	1	380	395	uv|U89961.1:1-4240	3471	3486	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107059761 (LOC107059761), mRNA	3.797468354
CLCdnRY12_3189	1	1	363	378	uv|J02459.1:1-48502-49	31181	31196	Weak	Weak	Suspect[379,395];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic (LOC102605549), mRNA	3.797468354
CLCdnRY3_62600	1	1	377	392	uv|U02436.1:3152-4436	168	183	Weak	Weak	Suspect[393,395];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 4	3.797468354
CLCdnRY6_70252	1	1	380	395	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	None	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102603980), mRNA	3.797468354
VdnRY4_19946	1	1	1	16	uv|FJ710109.1:6726-9221	449	464	Weak	Weak	None	TRUE_BIOLOGICAL	10375	1	PREDICTED: Solanum pennellii extensin-2-like (LOC107031093), transcript variant X3, mRNA	3.797468354
VdnRY1_5490	1	1	5	23	uv|J02459.1:1-48502-49	27243	27261	Moderate	Moderate	Suspect[1,4];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum H/ACA ribonucleoprotein complex subunit 3-like protein (LOC102579299), mRNA	4.568527919
CLCdnRY10_61600	1	1	365	381	uv|U09128.1:3334-10218	4581	4565	Weak	Weak	Suspect[382,394];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598819 (LOC102598819), mRNA	4.060913706
CLCdnRY12_78839	1	1	24	40	uv|X70481.1:3564-4492	739	723	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	4930	1		4.060913706
VdnRY1_136160	1	1	367	382	uv|KY031736.1:1-4885	3920	3935	Weak	Weak	Suspect[383,394];	TRUE_BIOLOGICAL	82115	1	Solanum tuberosum chromosome 1 mitochondrion, complete sequence	3.807106599
CLCdnRY12_33363	1	1	20	35	uv|KM407512.1:886-4985	2940	2955	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch04, complete genome	3.816793893
VdnRY3_11285	1	1	366	381	uv|J02482.1:1-5386-49	3220	3235	Weak	Weak	Suspect[382,393];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060866 (LOC107060866), ncRNA	3.816793893
CLCdnRY1_2036	1	1	368	387	uv|U55760.1:1-2749	2060	2079	Moderate	Moderate	Suspect[390,392];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum probable inactive serine/threonine-protein kinase slob2 (LOC102585320), mRNA	4.846938776
CLCdnRY1_2036	1	1	374	389	uv|U55760.1:1-2749	2060	2075	Weak	Moderate	Suspect[390,392];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum probable inactive serine/threonine-protein kinase slob2 (LOC102585320), mRNA	3.826530612
CLCdnRY10_64703	1	1	19	34	uv|Z46234.1:664-3443	328	343	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	4892	1	Solanum pennellii chromosome ch04, complete genome	3.826530612
CLCdnRY11_86248	1	1	357	372	uv|KC702179.1:1-1019	520	505	Weak	Weak	Suspect[373,392];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum histidine decarboxylase-like (LOC102580376), mRNA	3.826530612
CLCdnRY2_31324	1	1	24	39	uv|LC121524.1:7013-8404-8	714	729	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum pennellii phytochrome C (LOC107026045), transcript variant X7, mRNA	3.826530612
VdnRY2_58310	1	1	357	372	uv|KF718979.1:2206-6730	3024	3039	Weak	Weak	Suspect[373,392];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum lycopersicum CBL-interacting serine/threonine-protein kinase 1 (LOC101249805), transcript variant X1, mRNA	3.826530612
SdnRY1_56095	1	1	10	25	uv|EU048863.1:3783-3883	20	35	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	10639	1	PREDICTED: Solanum tuberosum homeobox-leucine zipper protein HDG11-like (LOC102595532), mRNA	3.836317136
VdnRY2_88841	1	1	24	39	uv|KC702207.1:1-1143	60	75	Weak	Weak	Suspect[1,23];	TRUE_ARTIFICIAL	81077	81077	Solanum lycopersicum cultivar I-3 chromosome 2	3.836317136
CLCdnRY3_3374	1	1	199	251	uv|KF719004.1:2204-2946	113	61	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2c gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	13.33333333
CLCdnRY1_57781	1	1	371	387	uv|J02459.1:1-48502-49	3483	3499	Weak	Weak	Suspect[388,390];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch09, complete genome	4.102564103
CLCdnRY3_63443	1	1	23	39	uv|NGB00125.1:1-108	103	87	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor 8-like (LOC102596847), mRNA	4.102564103
CLCdnRY10_61533	1	1	4	19	uv|U02452.1:1-991	354	339	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	558016	1	Solanum lycopersicum cultivar I-3 chromosome 5	3.846153846
VdnRY1_16825	1	1	1	16	uv|KC702236.1:1-1024	625	640	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 4	3.846153846
VdnRY4_12	1	1	23	38	uv|KF718996.1:2914-4532	461	446	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	Solanum pennellii chromosome ch10, complete genome	3.846153846
CLCdnRY1_6714	1	1	6	22	uv|HM162841.2:3175-3273	74	90	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum crocetin glucosyltransferase, chloroplastic-like (LOC102580161), mRNA	4.11311054
VdnRY1_983	1	1	363	378	uv|NGB00030.1:1033-1606	458	443	Weak	Weak	Suspect[379,389];	TRUE_BIOLOGICAL	153057	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580618 (LOC102580618), transcript variant X3, mRNA	3.856041131
CLCdnRY10_82434	1	1	368	383	uv|L08862.1:1-2039	257	242	Weak	Weak	Suspect[384,389];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum vetispiradiene synthase 3-like (LOC102592011), mRNA	3.856041131
CLCdnRY11_88097	1	1	368	383	uv|L08862.1:1-2039	257	242	Weak	Weak	Suspect[384,389];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum vetispiradiene synthase 3-like (LOC102592011), mRNA	3.856041131
VdnRY3_21285	1	1	7	23	uv|JQ927446.1:4885-6835-49	1635	1651	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	Solanum chacoense isolate SC3-12 chloroplast, complete genome	4.12371134
CLCdnRY11_57605	1	1	359	374	uv|AF327895.1:644-842	90	75	Weak	Weak	Suspect[375,388];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600585 (LOC102600585), mRNA	3.865979381
CLCdnRY10_59579	1	1	359	374	uv|U89961.1:1-4240	2130	2145	Weak	Weak	Suspect[375,388];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 4	3.865979381
CLCdnRY10_71060	1	1	18	33	uv|AF013258.1:795-893	42	57	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 4	3.875968992
SdnRY1_56500	1	1	365	380	uv|AY962893.1:2004-2563	235	220	Weak	Weak	Suspect[381,387];	TRUE_BIOLOGICAL	29487	1	Solanum pennellii chromosome ch06, complete genome	3.875968992
SdnRY1_56509	1	1	2	17	uv|M74186.1:2188-2959	157	142	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum chromosome ch06, complete genome	3.875968992
CLCdnRY10_12464	1	1	370	385	uv|X06779.1:1-4734	4176	4161	Weak	Weak	Suspect[386,387];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum thylakoid lumenal protein TL20.3, chloroplastic (LOC102582546), mRNA	3.875968992
CLCdnRY6_89092	1	1	357	372	uv|J02400.1:1-5243-49	2918	2903	Weak	Weak	Suspect[373,387];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum probable serine/threonine-protein kinase At1g18390 (LOC102602578), transcript variant X3, mRNA	3.875968992
CLCdnRY2_56631	1	1	366	381	uv|JN874480.1:1050-2714	513	498	Weak	Weak	Suspect[384,386];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch08, complete genome	3.886010363
CLCdnRY2_56631	1	1	368	383	uv|KC702222.1:1-1033	758	743	Weak	Weak	Suspect[384,386];	TRUE_BIOLOGICAL	33958	1	Solanum pennellii chromosome ch08, complete genome	3.886010363
SdnRY1_56650	1	1	20	35	uv|Y10545.1:2940-3095	51	36	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 (LOC102600893), mRNA	3.886010363
CLCdnRY3_38883	1	1	350	365	uv|J02400.1:1-5243-49	4002	3987	Weak	Weak	Suspect[366,386];	TRUE_BIOLOGICAL	151341	1	Solanum pennellii chromosome ch04, complete genome	3.886010363
VdnRY1_50601	1	1	1	16	uv|JF909482.1:3850-8059	1782	1767	Weak	Weak	None	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum Werner Syndrome-like exonuclease (LOC102594853), mRNA	3.886010363
VdnRY2_11622	1	1	364	379	uv|AY568055.1:9139-10024	391	376	Weak	Weak	Suspect[380,386];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060027 (LOC107060027), mRNA	3.886010363
VdnRY3_17220	1	1	347	362	uv|X65279.1:5154-5471	176	161	Weak	Weak	Suspect[363,386];	TRUE_BIOLOGICAL	460517	1	Davidiella sp. C42 28S large subunit ribosomal RNA gene, partial sequence	3.886010363
VdnRY5_13982	1	1	347	362	uv|Z22671.1:1221-1388	34	19	Weak	Weak	Suspect[363,386];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum uncharacterized LOC104644774 (LOC104644774), ncRNA	3.886010363
VdnRY7_159	1	1	12	27	uv|NGB00587.1:1-3232	815	830	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative casein kinase II subunit beta-4 (LOC102597719), transcript variant X2, mRNA	3.886010363
CLCdnRY12_57313	1	1	365	381	uv|FJ160466.1:1899-7260-49	3239	3223	Weak	Weak	Suspect[382,385];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592293 (LOC102592293), mRNA	4.155844156
CLCdnRY10_61039	1	1	367	382	uv|M18131.1:962-1051	41	56	Weak	Weak	Suspect[383,385];	TRUE_BIOLOGICAL	620	1	Solanum pennellii chromosome ch03, complete genome	3.896103896
CLCdnRY11_54202	1	1	370	385	uv|JN581374.1:616-2149	153	138	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1		3.896103896
CLCdnRY10_18877	1	1	22	37	uv|AF102576.1:7950-8118	116	101	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related protein R major form-like (LOC102595298), mRNA	3.896103896
SdnRY1_56656	1	1	10	25	uv|JN243345.1:599-853	3	18	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	Solanum tuberosum uncharacterized LOC102577710 (LOC102577710), mRNA<>Solanum tuberosum clone 057E05 unknown mRNA	3.896103896
VdnRY2_8423	1	1	347	362	uv|KC702235.1:1-872	414	429	Weak	Weak	Suspect[363,385];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum 1-aminocyclopropane-1-carboxylate oxidase homolog (LOC102597881), transcript variant X2, mRNA	3.896103896
VdnRY1_79023	1	1	11	28	uv|L08860.1:1-1129	38	55	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 3	4.427083333
CLCdnRY7_14647	1	1	20	36	uv|EU140750.1:5600-5698	84	68	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum heme-binding-like protein At3g10130, chloroplastic (LOC102602209), mRNA	4.166666667
SdnRY1_56774	1	1	12	28	uv|GU593054.1:1-1305	829	813	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584309 (LOC102584309), transcript variant X4, ncRNA	4.166666667
CLCdnRY3_50779	1	1	14	29	uv|J02459.1:1-48502-49	47209	47194	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch11, complete genome	3.90625
VdnRY4_29014	1	1	356	371	uv|NGB01065.1:1-66	44	29	Weak	Weak	Suspect[372,384];	NO_DATA	1	1	PREDICTED: Solanum tuberosum vesicle-associated membrane protein 714 (LOC102600875), mRNA	3.90625
CLCdnRY10_85667	1	1	366	381	uv|KF718996.1:2914-4532	222	207	Weak	Weak	Suspect[382,384];	NO_DATA	1	1	PREDICTED: Solanum tuberosum myosin heavy chain kinase B-like (LOC102598364), mRNA	3.90625
CLCdnRY12_74435	1	1	350	365	uv|Z46234.1:664-3443	2410	2395	Weak	Weak	Suspect[366,384];	TRUE_BIOLOGICAL	4892	1	Solanum demissum R8 gene cluster, partial sequence	3.90625
CLCdnRY1_15064	1	1	23	38	uv|GU593054.1:6136-8806	1511	1526	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 1.2-like (LOC102579133), mRNA	3.90625
CLCdnRY6_75940	1	1	350	365	uv|Z46234.1:664-3443	2410	2395	Weak	Weak	Suspect[366,384];	TRUE_BIOLOGICAL	4892	1	Solanum demissum R8 gene cluster, partial sequence	3.90625
CLCdnRY7_8172	1	1	6	21	uv|L08879.1:293-419	43	58	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102603897 (LOC102603897), mRNA	3.90625
CLCdnRY8_11728	1	1	23	38	uv|GU593054.1:6136-8806	1511	1526	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein NRT1/ PTR FAMILY 1.2-like (LOC102579133), mRNA	3.90625
VdnRY4_14312	1	1	15	30	uv|M98046.1:2386-3803	735	720	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	4930	1	Homo sapiens isolate hybrid A9-22 NOR distal junction on HSA22 genomic sequence	3.90625
VdnRY7_9350	1	1	19	34	uv|J02459.1:1-48502-49	22148	22163	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum E3 ubiquitin protein ligase RIN2 (LOC102592947), mRNA	3.90625
CLCdnRY7_47943	1	1	336	361	uv|U67875.1:5357-5483	88	63	Moderate	Moderate	Suspect[362,383];	TRUE_BIOLOGICAL	2759	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At1g53430 (LOC102588396), transcript variant X2, mRNA	6.527415144
CLCdnRY5_34020	1	1	344	365	uv|JN874481.1:57-2095	1733	1754	Weak	Weak	Suspect[366,383];	TRUE_BIOLOGICAL	86599	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593566 (LOC102593566), transcript variant X17, ncRNA	5.483028721
CLCdnRY11_47556	1	1	9	25	uv|EU186086.1:9349-10480-30	721	705	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum tuberosum U3 small nucleolar RNA-associated protein 18 homolog (LOC102587394), mRNA	4.177545692
CLCdnRY12_18229	1	1	350	366	uv|FJ710109.1:6726-9221	662	646	Weak	Weak	Suspect[367,383];	TRUE_BIOLOGICAL	10375	1	PREDICTED: Solanum tuberosum probable galacturonosyltransferase-like 3 (LOC102584036), mRNA	4.177545692
CLCdnRY6_48176	1	1	350	366	uv|L08862.1:2848-3728-49	820	804	Weak	Weak	Suspect[367,383];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589158 (LOC102589158), transcript variant X4, mRNA	4.177545692
CLCdnRY1_24673	1	1	355	370	uv|KC614689.1:4213-4921	554	569	Weak	Weak	Suspect[371,383];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 4	3.916449086
SdnRY1_56914	1	1	24	39	uv|KC702183.1:1-1023	866	881	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	196118	1		3.916449086
SdnRY1_56926	1	1	358	373	uv|L08862.1:1-2039	1666	1651	Weak	Weak	Suspect[374,383];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102601821 (LOC102601821), transcript variant X1, mRNA	3.916449086
VdnRY2_13326	1	1	356	371	uv|J02482.1:1-5386-49	3220	3235	Weak	Weak	Suspect[372,383];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060866 (LOC107060866), ncRNA	3.916449086
CLCdnRY8_41767	1	1	25	40	uv|DQ391279.1:1-10285	1439	1424	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum GATA transcription factor 26-like (LOC102593619), mRNA	3.916449086
VdnRY1_85006	1	1	365	380	uv|KF718979.1:2206-6730	4375	4390	Weak	Weak	Suspect[381,383];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch11, complete genome	3.916449086
VdnRY3_5979	1	1	367	382	uv|NGB00587.1:1-3232	1351	1336	Weak	Weak	Suspect[383,383];	NO_DATA	1	1	PREDICTED: Solanum tuberosum bifunctional purine biosynthesis protein PurH (LOC102602993), mRNA	3.916449086
VdnRY6_21592	1	1	368	383	uv|NGB00402.1:2108-3532	337	322	Weak	Weak	None	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604791 (LOC102604791), mRNA	3.916449086
CLCdnRY1_44519	1	1	17	32	uv|FJ750577.1:368-2560	521	536	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	4447	1	Solanum pennellii chromosome ch04, complete genome	3.926701571
SdnRY1_57004	1	1	343	358	uv|KC702201.1:1-1023	623	608	Weak	Weak	Suspect[359,382];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch08, complete genome	3.926701571
CLCdnRY1_61100	1	1	344	359	uv|NGB00051.1:1428-2848	268	253	Weak	Weak	Suspect[360,382];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578511 (LOC102578511), mRNA	3.926701571
CLCdnRY7_21531	1	1	3	18	uv|KF718979.1:2206-6730	4129	4114	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum dehydrodolichyl diphosphate synthase 2-like (LOC102581796), mRNA	3.926701571
VdnRY3_292	1	1	7	22	uv|L05083.1:3796-4440	368	353	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 73C5-like (LOC102604180), partial mRNA	3.926701571
VdnRY4_19213	1	1	356	371	uv|M77169.1:820-5161	2111	2126	Weak	Weak	Suspect[372,382];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum chloride channel protein CLC-e (LOC102592091), transcript variant X3, misc_RNA	3.926701571
VdnRY6_18203	1	1	350	365	uv|KC702186.1:1-274	193	178	Weak	Weak	Suspect[366,382];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable plastid-lipid-associated protein 13, chloroplastic (LOC102596905), mRNA	3.926701571
SdnRY1_57055	1	1	84	236	uv|JF909467.1:4676-4959	58	214	Strong	Strong	None	NO_DATA	1	1	Potato light-inducible tissue-specific ST-LS1 gene	39.89501312
SdnRY1_57068	1	1	56	78	uv|JX025643.1:1-2941	308	330	Weak	Weak	None	NO_DATA	1	1	Solanum tuberosum chromosome 5 clone PGEC13, complete sequence	5.774278215
CLCdnRY10_5358	1	1	354	369	uv|KC702231.1:1-1021	838	823	Weak	Weak	Suspect[370,381];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 12	3.937007874
VdnRY5_37855	1	1	19	34	uv|LC121524.1:7013-8404-8	239	224	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum ycf3-interacting protein 1, chloroplastic (LOC101259586), transcript variant X1, mRNA	3.937007874
VdnRY6_10041	1	1	356	371	uv|KC702234.1:1-1022	280	265	Weak	Weak	Suspect[372,381];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum RNA polymerase I-specific transcription initiation factor RRN3 (LOC102602356), mRNA	3.937007874
CLCdnRY2_423	1	1	359	374	uv|U09476.1:1-864	494	479	Weak	Weak	Suspect[375,381];	TRUE_BIOLOGICAL	581	1	PREDICTED: Solanum pennellii apolipoprotein A-I (LOC107028626), mRNA	3.937007874
CLCdnRY4_67651	1	1	18	33	uv|AF102576.1:7950-8118	116	101	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pathogenesis-related protein R major form-like (LOC102595298), mRNA	3.937007874
VdnRY2_26305	1	1	16	38	uv|NGB00839.1:1-63	9	31	Weak	Weak	Suspect[1,15];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum receptor-like kinase TMK4 (LOC102578437), mRNA	5.789473684
CLCdnRY9_51645	1	1	355	371	uv|Z46234.1:7923-9273	1032	1016	Weak	Weak	Suspect[372,380];	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum protein ECERIFERUM 1-like (LOC102579884), mRNA	4.210526316
CLCdnRY1_55835	1	1	351	366	uv|FJ160466.1:1899-7260-49	3671	3656	Weak	Weak	Suspect[367,380];	TRUE_BIOLOGICAL	620	1	Solanum pennellii chromosome ch05, complete genome	3.947368421
CLCdnRY2_31439	1	1	352	367	uv|M86847.1:4610-4716	65	80	Weak	Weak	Suspect[368,380];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase XBAT33 (LOC102579551), mRNA	3.947368421
SdnRY1_57225	1	1	2	17	uv|AF013258.1:557-763	24	39	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	3.947368421
SdnRY1_57240	1	1	362	377	uv|U02436.1:6848-7226	154	139	Weak	Weak	Suspect[378,380];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch12, complete genome	3.947368421
CLCdnRY12_1021	1	1	365	380	uv|KY031733.1:1-4952	1806	1791	Weak	Weak	None	TRUE_BIOLOGICAL	82115	1	Solanum lycopersicum cultivar I-3 chromosome 10	3.947368421
CLCdnRY12_61540	1	1	342	357	uv|U13189.1:13856-14470	198	213	Weak	Weak	Suspect[358,380];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum F-box protein At3g59000-like (LOC102602045), mRNA	3.947368421
CLCdnRY4_24340	1	1	20	35	uv|EF456735.1:7106-7196	77	62	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum leucine-rich repeat extensin-like protein 6 (LOC102582490), mRNA	3.947368421
VdnRY3_74145	1	1	359	374	uv|J02482.1:1-5386-49	1253	1268	Weak	Weak	Suspect[375,380];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum kynurenine formamidase-like (LOC102591479), partial mRNA	3.947368421
VdnRY2_10931	1	1	347	364	uv|KY031727.1:11896-11979-16	2	19	Weak	Weak	Suspect[365,378];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 10	4.497354497
SdnRY1_57415	1	1	11	27	uv|KM407512.1:886-4985	1657	1641	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 7	4.232804233
CLCdnRY12_70090	1	1	2	18	uv|M98046.1:2386-3803	848	832	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum carbon catabolite repressor protein 4 homolog 6 (LOC101244977), transcript variant X3, mRNA	4.232804233
VdnRY2_60461	1	1	12	28	uv|KF719005.1:2205-5132	542	526	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch07, complete genome	4.232804233
CLCdnRY1_13769	1	1	12	27	uv|U59231.1:5103-7490	1271	1286	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	5658	1	Solanum pennellii chromosome ch04, complete genome	3.968253968
CLCdnRY1_56614	1	1	21	36	uv|KF718979.1:2206-6730	3764	3779	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch12, complete genome	3.968253968
CLCdnRY3_29483	1	1	3	18	uv|KC702222.1:1-1033	758	743	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	33958	1	PREDICTED: Solanum tuberosum transmembrane protein 230-like (LOC102584498), mRNA	3.968253968
SdnRY1_57357	1	1	9	24	uv|KC702178.1:1-2022	1021	1006	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch07, complete genome	3.968253968
SdnRY1_57388	1	1	353	368	uv|NGB00587.1:1-3232	1463	1478	Weak	Weak	Suspect[369,378];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	3.968253968
VdnRY1_33358	1	1	358	373	uv|KF718994.1:2210-3019	323	338	Weak	Weak	Suspect[378,378];	NO_DATA	1	1	Solanum edinense EDNR2GH4 protein gene, complete cds	3.968253968
VdnRY1_33358	1	1	362	377	uv|GU593055.1:13024-13902-49	176	191	Weak	Weak	Suspect[378,378];	NO_DATA	1	1	Solanum edinense EDNR2GH4 protein gene, complete cds	3.968253968
CLCdnRY8_10641	1	1	363	378	uv|L05669.1:1-1770	691	676	Weak	Weak	None	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum 60S ribosomal protein L3-2 (LOC102590107), transcript variant X2, mRNA	3.968253968
CLCdnRY9_23135	1	1	354	369	uv|EF456735.1:7106-7196	62	77	Weak	Weak	Suspect[370,378];	NO_DATA	1	1	PREDICTED: Solanum tuberosum leucine-rich repeat extensin-like protein 6 (LOC102582490), mRNA	3.968253968
SdnRY1_57337	1	1	5	20	uv|JQ394798.1:1156-1255	17	2	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	3.968253968
CLCdnRY8_44627	1	1	355	376	uv|FM991889.1:1-391	200	179	Weak	Weak	Suspect[377,377];	NO_DATA	1	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase SAPK1-like (LOC102590012), transcript variant X1, mRNA	5.570291777
CLCdnRY10_82033	1	1	18	33	uv|KP057689.1:1-859	354	339	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	84111	1	PREDICTED: Solanum tuberosum glutamic acid-rich protein-like (LOC102598091), mRNA	3.978779841
CLCdnRY7_4148	1	1	25	40	uv|M77169.1:820-5161	3873	3858	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum uncharacterized LOC102594807 (LOC102594807), mRNA	3.978779841
VdnRY6_22722	1	1	353	368	uv|M16217.1:1-2529	1458	1473	Weak	Weak	Suspect[369,377];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein FATTY ACID EXPORT 1, chloroplastic-like (LOC102590318), mRNA	3.978779841
VdnRY4_69802	1	1	347	364	uv|KF718979.1:2206-6730	1023	1006	Weak	Weak	Suspect[365,376];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like (LOC102587860), mRNA	4.521276596
VdnRY4_41229	1	1	350	366	uv|AF379854.1:4263-5841	698	682	Weak	Weak	Suspect[367,376];	TRUE_BIOLOGICAL	5820	1		4.255319149
CLCdnRY6_27666	1	1	350	365	uv|KC702194.1:1-1023	68	83	Weak	Weak	Suspect[366,376];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum protein NBR1 homolog (LOC102582603), transcript variant X2, mRNA	3.989361702
VdnRY1_78284	1	1	24	39	uv|M16192.1:1-2517-49	1679	1664	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584830 (LOC102584830), mRNA	3.989361702
VdnRY7_21157	1	1	23	38	uv|JX992842.1:2542-2849	187	202	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum DAG protein, chloroplastic (LOC102597199), mRNA	3.989361702
CLCdnRY1_47248	1	1	1	375	uv|FJ160466.1:1899-7260-49	4845	5219	Strong	Strong	None	TRUE_BIOLOGICAL	91347	1	Escherichia albertii strain 05-3106 plasmid unnamed2, complete sequence	99.73333333
VdnRY1_94177	1	1	24	42	uv|AY508732.1:1351-1608	163	145	Moderate	Moderate	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102591973 (LOC102591973), mRNA	4.8
CLCdnRY9_39388	1	1	21	38	uv|J02482.1:1-5386-49	4638	4621	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum heavy metal-associated isoprenylated plant protein 26-like (LOC102599308), mRNA	4.533333333
CLCdnRY8_44823	1	1	17	34	uv|KM407505.1:939-2365	472	489	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101251336 (LOC101251336), ncRNA	4.533333333
SdnRY1_57660	1	1	16	32	uv|EU546814.1:7770-7919	38	54	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 2	4.266666667
VdnRY1_42486	1	1	25	41	uv|KF680545.1:1-2837	619	603	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cullin-1-like (LOC102605003), mRNA	4.266666667
CLCdnRY10_56986	1	1	20	35	uv|M27550.1:4-74	52	67	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized protein At1g04910-like (LOC102585106), mRNA	4
VdnRY1_73519	1	1	359	374	uv|M16192.1:1-2517-49	2009	1994	Weak	Weak	Suspect[375,375];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch06, complete genome	4
CLCdnRY10_58073	1	1	3	18	uv|AF379854.1:3-2710	1918	1903	Weak	Weak	Suspect[1,2];	NO_DATA	1	1		4
CLCdnRY3_11520	1	1	336	351	uv|JX560321.2:370-1372	232	247	Weak	Weak	Suspect[352,375];	NO_DATA	1	1	PREDICTED: Solanum tuberosum tyramine N-feruloyltransferase 4/11-like (LOC102578749), mRNA	4
VdnRY1_98753	1	1	11	26	uv|Z50148.1:1-178	45	60	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum thioredoxin H2-like (LOC102593604), transcript variant X2, mRNA	4
VdnRY4_2330	1	1	1	16	uv|DQ666274.1:249-3225	2792	2807	Weak	Weak	None	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586591 (LOC102586591), mRNA	4
VdnRY6_5888	1	1	351	366	uv|LC121523.1:7712-7810	32	17	Weak	Weak	Suspect[367,375];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586186 (LOC102586186), transcript variant X16, mRNA	4
CLCdnRY7_6826	1	1	344	360	uv|X51450.1:2521-3852	958	974	Weak	Weak	Suspect[361,374];	TRUE_BIOLOGICAL	1279	1		4.278074866
CLCdnRY8_24729	1	1	338	353	uv|M77169.1:820-5161	2030	2015	Weak	Weak	Suspect[354,374];	TRUE_BIOLOGICAL	1485	1	Solanum pennellii chromosome ch09, complete genome	4.010695187
CLCdnRY10_44484	1	1	14	29	uv|KF680545.1:1-2837	1558	1573	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein EXECUTER 1, chloroplastic (LOC102589029), mRNA	4.010695187
CLCdnRY12_39336	1	1	8	23	uv|M37852.1:43-109	51	36	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum tuberosum phosphoenolpyruvate carboxylase kinase 1-like (LOC102594673), mRNA	4.010695187
CLCdnRY7_46828	1	1	347	362	uv|EU186086.1:9349-10480-30	532	547	Weak	Weak	Suspect[363,374];	NO_DATA	1	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase CDL1 (LOC102585340), mRNA	4.010695187
CLCdnRY9_2185	1	1	346	361	uv|U89961.1:1-4240	3646	3661	Weak	Weak	Suspect[362,374];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum protein ECERIFERUM 1-like (LOC102593084), mRNA	4.010695187
VdnRY1_44080	1	1	339	354	uv|U02436.1:3152-4436	436	421	Weak	Weak	Suspect[355,374];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum coatomer subunit beta'-2-like (LOC102604581), mRNA	4.010695187
VdnRY1_82302	1	1	356	371	uv|KC503965.1:3195-3771-42	361	376	Weak	Weak	Suspect[372,374];	TRUE_BIOLOGICAL	1224	1	Solanum demissum chromosome 5 clone PGEC747E24, complete sequence	4.010695187
VdnRY2_116632	1	1	19	34	uv|KY031735.1:1-4680	4038	4053	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum auxin response factor 17 (LOC102588218), mRNA	4.010695187
VdnRY6_12115	1	1	3	20	uv|KF718996.1:2914-4532	385	368	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative G3BP-like protein (LOC102594129), transcript variant X4, mRNA	4.557640751
VdnRY3_38005	1	1	354	370	uv|X70276.1:4179-4959	399	415	Weak	Weak	Suspect[371,373];	TRUE_BIOLOGICAL	4930	1	Hyoscyamus niger mitochondrion, complete genome	4.289544236
CLCdnRY11_69082	1	1	347	362	uv|L07041.1:1-670	264	279	Weak	Weak	Suspect[363,373];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599669 (LOC102599669), mRNA	4.021447721
CLCdnRY10_57176	1	1	12	27	uv|KC702237.1:1-1024	365	380	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.021447721
CLCdnRY12_43127	1	1	20	35	uv|KY031736.1:1-4885	1799	1814	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum subtilisin-like protease SBT1.7 (LOC102595699), misc_RNA	4.021447721
SdnRY1_57840	1	1	5	20	uv|KC702201.1:1-1023	899	884	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At4g26540 (LOC102596550), mRNA	4.021447721
VdnRY1_31207	1	1	15	30	uv|KM407509.1:3217-4703	807	822	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	40674	1	Solanum lycopersicum peptidyl-prolyl cis-trans isomerase FKBP16-2, chloroplastic (SlFKBP16-2), long non-coding RNA	4.021447721
VdnRY2_5503	1	1	15	30	uv|NGB00176.1:1-51	17	2	Weak	Weak	Suspect[1,14];	TRUE_ARTIFICIAL	81077	81077	Solanum lycopersicum cultivar I-3 chromosome 7	4.021447721
VdnRY2_38601	1	1	342	357	uv|KF718979.1:2206-6730	1585	1570	Weak	Weak	Suspect[358,373];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum lycopersicum GATA transcription factor 26-like (LOC101246747), mRNA	4.021447721
CLCdnRY2_44218	1	1	345	360	uv|EU186086.1:9349-10480-30	532	547	Weak	Weak	Suspect[361,372];	NO_DATA	1	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase CDL1 (LOC102585340), mRNA	4.032258065
CLCdnRY9_5081	1	1	340	355	uv|U13843.1:1887-9923	7731	7746	Weak	Weak	Suspect[356,372];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum potassium transporter 8-like (LOC102586526), mRNA	4.032258065
VdnRY3_13072	1	1	349	364	uv|M35007.1:1-864	79	94	Weak	Weak	Suspect[365,372];	NO_DATA	1	1	PREDICTED: Solanum tuberosum UPF0481 protein At3g47200-like (LOC102582582), mRNA	4.032258065
CLCdnRY6_35240	1	1	348	364	uv|J02459.1:1-48502-49	44940	44924	Weak	Weak	Suspect[365,371];	TRUE_BIOLOGICAL	10699	1	Solanum tuberosum putative membrane bound NAC transcription factor 2 mRNA, complete cds	4.312668464
CLCdnRY11_66935	1	1	15	30	uv|Z32692.1:2323-5137	1039	1054	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum lycopersicum vacuolar sorting protein 18 (LOC101246251), mRNA	4.043126685
CLCdnRY1_42633	1	1	344	359	uv|EU186086.1:9349-10480-30	532	547	Weak	Weak	Suspect[360,371];	NO_DATA	1	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase CDL1 (LOC102585340), mRNA	4.043126685
VdnRY6_27710	1	1	350	366	uv|J02459.1:1-48502-49	22836	22820	Weak	Weak	Suspect[367,370];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum DNA-binding protein DDB_G0278111 (LOC102592706), mRNA	4.324324324
SdnRY1_58217	1	1	334	349	uv|KF680545.1:1-2837	1038	1053	Weak	Weak	Suspect[350,370];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 10	4.054054054
VdnRY1_29045	1	1	341	356	uv|M98046.1:2386-3803	882	897	Weak	Weak	Suspect[357,370];	TRUE_BIOLOGICAL	4930	1	Solanum tuberosum SnRK1 alpha subunit mRNA, complete cds	4.054054054
CLCdnRY1_53943	1	1	2	17	uv|U02427.1:2631-2729	15	30	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch02, complete genome	4.054054054
CLCdnRY3_18312	1	1	15	30	uv|AF379854.1:3-2710	706	691	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase HT1-like (LOC102582891), mRNA	4.054054054
CLCdnRY5_57273	1	1	13	28	uv|J01636.1:1-7477	5281	5266	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum alpha/beta hydrolase domain-containing protein 17B-like (LOC102583447), mRNA	4.054054054
CLCdnRY8_26076	1	1	22	37	uv|AF327712.1:1582-7289	1094	1109	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum flowering time control protein FY (LOC102597827), mRNA	4.054054054
VdnRY3_71779	1	1	340	355	uv|AY568055.1:6692-7837	157	142	Weak	Weak	Suspect[356,370];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102603960 (LOC102603960), mRNA	4.054054054
CLCdnRY7_9803	1	1	1	367	uv|HQ245711.1:5539-7450	1221	855	Strong	Strong	Suspect[368,369];	NO_DATA	1	1	Cloning vector pPS-NR, complete sequence	99.18699187
CLCdnRY8_38832	1	1	352	369	uv|M16192.1:1-2517-49	1574	1557	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum pennellii phosphoribulokinase, chloroplastic (LOC107028386), mRNA	4.60704607
CLCdnRY4_48357	1	1	25	41	uv|L08927.1:4048-4049-49	42	26	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum multisubstrate pseudouridine synthase 7 (LOC102592116), transcript variant X2, mRNA	4.33604336
VdnRY2_118306	1	1	344	360	uv|JX181778.1:10266-10316-48	1	17	Weak	Weak	Suspect[361,369];	NO_DATA	1	1	Solanum lycopersicum strain Heinz 1706 chromosome 10 clone hba-58o17 map 10, complete sequence	4.33604336
SdnRY1_58309	1	1	24	39	uv|AY301066.1:1-1261	848	863	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	28105	1	PREDICTED: Solanum tuberosum proline-rich receptor-like protein kinase PERK9 (LOC102585366), transcript variant X1, mRNA	4.06504065
VdnRY4_21012	1	1	340	355	uv|KC702228.1:1-1023	25	40	Weak	Weak	Suspect[356,369];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum replication protein A 70 kDa DNA-binding subunit B-like (LOC102599322), transcript variant X14, misc_RNA	4.06504065
CLCdnRY1_56671	1	1	350	365	uv|J02459.1:1-48502-49	29136	29151	Weak	Weak	Suspect[366,369];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592988 (LOC102592988), mRNA	4.06504065
CLCdnRY6_43414	1	1	8	23	uv|M37852.1:43-109	51	36	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum tuberosum phosphoenolpyruvate carboxylase kinase 1-like (LOC102594673), mRNA	4.06504065
VdnRY7_22487	1	1	337	352	uv|L08860.1:1134-1231	45	60	Weak	Weak	Suspect[353,369];	NO_DATA	1	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 79B8-like (LOC107061873), mRNA	4.06504065
CLCdnRY4_83745	1	1	82	147	uv|JX025643.1:5074-5255	115	180	Strong	Strong	None	NO_DATA	1	1	Cloning vector p35S::CASP2:GFP, complete sequence	17.66304348
CLCdnRY3_68694	1	1	19	35	uv|NGB00413.1:4732-7508	238	222	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	12103	1	PREDICTED: Solanum tuberosum extensin-2-like (LOC102601519), mRNA	4.347826087
SdnRY1_58405	1	1	337	353	uv|U09476.1:1-864	87	103	Weak	Weak	Suspect[354,368];	TRUE_BIOLOGICAL	581	1	Solanum pennellii chromosome ch09, complete genome	4.347826087
VdnRY1_97598	1	1	333	349	uv|DQ493881.2:2963-3059	35	19	Weak	Weak	Suspect[350,368];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum exosome complex exonuclease RRP46 homolog (LOC102597142), mRNA	4.347826087
VdnRY3_61552	1	1	22	38	uv|KC702183.1:1-1023	985	969	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum ammonium transporter 1 member 1 (LOC102578709), partial mRNA	4.347826087
CLCdnRY4_60582	1	1	4	19	uv|U02452.1:1-991	354	339	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	558016	1	Solanum lycopersicum cultivar I-3 chromosome 5	4.076086957
CLCdnRY8_26237	1	1	18	33	uv|KC702169.1:1-808	567	552	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum cysteine-rich receptor-like protein kinase 10 (LOC102603268), transcript variant X3, mRNA	4.076086957
SdnRY1_58425	1	1	349	364	uv|J02459.1:1-48502-49	32815	32830	Weak	Weak	Suspect[365,368];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch02, complete genome	4.076086957
SdnRY1_58440	1	1	351	366	uv|KF719005.1:2205-5132	2144	2129	Weak	Weak	Suspect[367,368];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum pennellii uncharacterized LOC107026825 (LOC107026825), transcript variant X23, ncRNA	4.076086957
CLCdnRY7_439	1	1	346	361	uv|U09476.1:1-864	494	479	Weak	Weak	Suspect[362,368];	TRUE_BIOLOGICAL	581	1	PREDICTED: Solanum pennellii apolipoprotein A-I (LOC107028626), mRNA	4.076086957
CLCdnRY9_12908	1	1	20	35	uv|JX560397.1:83-5970	2409	2394	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At3g59040 (LOC102605894), transcript variant X2, mRNA	4.076086957
SdnRY1_58360	1	1	10	25	uv|KM407508.1:753-839	9	24	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch11, complete genome	4.076086957
SdnRY1_58361	1	1	10	25	uv|KM407508.1:753-839	9	24	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum O-fucosyltransferase family protein (LOC101246780), transcript variant X1, mRNA	4.076086957
SdnRY1_58512	1	1	110	139	uv|NGB00051.1:1428-2848	1318	1289	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585618 (LOC102585618), ncRNA	7.901907357
CLCdnRY1_48421	1	1	8	25	uv|AY753578.1:1-838	485	502	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	6181	1	Solanum lycopersicum cultivar I-3 chromosome 4	4.632152589
CLCdnRY11_59381	1	1	4	20	uv|AF379854.1:3-2710	1519	1535	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.359673025
CLCdnRY3_42159	1	1	7	23	uv|JF909478.1:3849-4965	579	563	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	10639	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g62370 (LOC102601868), transcript variant X8, mRNA	4.359673025
CLCdnRY10_54393	1	1	17	32	uv|KY031725.1:1-5101	2708	2723	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum uncharacterized LOC102591624 (LOC102591624), transcript variant X6, mRNA	4.08719346
VdnRY6_22004	1	1	329	344	uv|M18804.1:1-214	171	156	Weak	Weak	Suspect[345,367];	NO_DATA	1	1	PREDICTED: Solanum tuberosum nuclear transcription factor Y subunit C-1-like (LOC102603380), mRNA	4.08719346
SdnRY1_58648	1	1	2	18	uv|J02459.1:1-48502-49	41935	41919	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	10699	1		4.371584699
CLCdnRY8_8622	1	1	344	360	uv|DQ883689.3:1-1994	1596	1612	Weak	Weak	Suspect[361,366];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized protein sll1770 (LOC102587186), transcript variant X2, mRNA	4.371584699
VdnRY2_21194	1	1	17	33	uv|AF123770.1:15289-15411	103	119	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	4.371584699
CLCdnRY12_61398	1	1	344	359	uv|M77169.1:820-5161	1077	1092	Weak	Weak	Suspect[360,366];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum FRIGIDA-like protein 3 (LOC102598110), transcript variant X4, mRNA	4.098360656
CLCdnRY12_91858	1	1	5	20	uv|M16192.1:1-2517-49	1367	1382	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Nicotiana sylvestris uncharacterized LOC104225914 (LOC104225914), transcript variant X2, mRNA	4.098360656
CLCdnRY3_74811	1	1	338	353	uv|JX069764.1:9156-9498	195	180	Weak	Weak	Suspect[354,366];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At5g45780 (LOC102601304), transcript variant X2, mRNA	4.098360656
CLCdnRY6_93149	1	1	5	20	uv|M16192.1:1-2517-49	1367	1382	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Nicotiana sylvestris uncharacterized LOC104225914 (LOC104225914), transcript variant X2, mRNA	4.098360656
VdnRY1_168643	1	1	333	348	uv|J02459.1:1-48502-49	26606	26591	Weak	Weak	Suspect[349,366];	TRUE_BIOLOGICAL	10699	1	Solanum tuberosum clone RH066A20, complete sequence	4.098360656
CLCdnRY5_59796	1	1	4	20	uv|AF379854.1:3-2710	1519	1535	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.383561644
CLCdnRY10_77333	1	1	1	16	uv|JX573199.1:4967-5095	85	70	Weak	Weak	None	NO_DATA	1	1		4.109589041
CLCdnRY12_8644	1	1	13	28	uv|X06402.1:3128-3225	84	69	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cytokinesis protein sepA-like (LOC102582165), mRNA	4.109589041
CLCdnRY12_38775	1	1	7	22	uv|M17546.1:1-215	18	33	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	9030	1		4.109589041
CLCdnRY8_17382	1	1	11	26	uv|JF909482.1:3850-8059	3985	3970	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum inactive poly [ADP-ribose] polymerase RCD1 (LOC102584569), transcript variant X3, mRNA	4.109589041
CLCdnRY9_63425	1	1	343	358	uv|JX560397.1:83-5970	3441	3426	Weak	Weak	Suspect[359,365];	TRUE_BIOLOGICAL	1236	1		4.109589041
VdnRY2_40772	1	1	326	341	uv|AF379854.1:4263-5841	347	332	Weak	Weak	Suspect[342,365];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum copper transporter 6-like (LOC102591949), mRNA	4.109589041
VdnRY3_33928	1	1	337	352	uv|L08860.1:1858-2910-49	688	703	Weak	Weak	Suspect[353,365];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum guanine nucleotide exchange factor SPIKE 1 (LOC102590845), mRNA	4.109589041
VdnRY3_33928	1	1	323	338	uv|M77169.1:820-5161	3879	3894	None	Weak	Suspect[353,365];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum guanine nucleotide exchange factor SPIKE 1 (LOC102590845), mRNA	4.109589041
CLCdnRY3_61916	1	1	10	26	uv|EF036511.1:4679-4770	53	69	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative pentatricopeptide repeat-containing protein At1g74580 (LOC102585346), transcript variant X4, misc_RNA	4.395604396
CLCdnRY3_69796	1	1	24	40	uv|KF718979.1:2206-6730	3636	3620	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	3701	1	Solanum tuberosum chromosome 2 mitochondrion, complete sequence	4.395604396
CLCdnRY10_4657	1	1	20	35	uv|AY568055.1:6692-7837	199	214	Weak	Weak	Suspect[1,19];Suspect[362,364];	NO_DATA	1	1	PREDICTED: Solanum tuberosum rac-like GTP-binding protein 5 (LOC102598995), mRNA	4.120879121
CLCdnRY10_4657	1	1	346	361	uv|KM062047.1:4179-4302	74	59	Weak	Weak	Suspect[1,19];Suspect[362,364];	NO_DATA	1	1	PREDICTED: Solanum tuberosum rac-like GTP-binding protein 5 (LOC102598995), mRNA	4.120879121
CLCdnRY12_81213	1	1	336	351	uv|AY568055.1:6692-7837	415	430	Weak	Weak	Suspect[352,364];	NO_DATA	1	1	Solanum tuberosum chromosome 7 clone RHPOTKEY101K20, complete sequence	4.120879121
CLCdnRY3_20101	1	1	10	25	uv|Z46234.1:664-3443	948	933	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum mitogen-activated protein kinase 9-like (LOC102586279), transcript variant X3, mRNA	4.120879121
VdnRY1_120075	1	1	12	27	uv|AY962893.1:8266-9065	118	133	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	29487	1	Solanum pennellii chromosome ch05, complete genome	4.120879121
CLCdnRY10_5568	1	1	329	344	uv|DQ666274.1:249-3225	2735	2720	Weak	Weak	Suspect[345,364];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum dephospho-CoA kinase-like (LOC102587364), transcript variant X7, mRNA	4.120879121
CLCdnRY12_10262	1	1	334	349	uv|AF061931.1:2946-4188-49	1034	1019	Weak	Weak	Suspect[350,364];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable inactive purple acid phosphatase 1 (LOC102595766), mRNA	4.120879121
CLCdnRY12_40414	1	1	347	362	uv|GU593054.1:6136-8806	1311	1326	Weak	Weak	Suspect[363,364];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protease Do-like 9 (LOC102582796), mRNA	4.120879121
CLCdnRY6_63120	1	1	342	357	uv|M77169.1:820-5161	1077	1092	Weak	Weak	Suspect[358,364];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum FRIGIDA-like protein 3 (LOC102598110), transcript variant X4, mRNA	4.120879121
CLCdnRY7_45003	1	1	334	349	uv|DQ317695.1:1340-3572	554	539	Weak	Weak	Suspect[350,364];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum vetispiradiene synthase 3-like (LOC102583484), mRNA	4.120879121
CLCdnRY9_21611	1	1	333	348	uv|JN874480.1:11708-20103	6381	6396	Weak	Weak	Suspect[349,364];	NO_DATA	1	1	Solanum tuberosum chromosome 1 mitochondrion, complete sequence	4.120879121
VdnRY1_29319	1	1	342	357	uv|DQ666274.1:249-3225	2865	2850	Weak	Weak	Suspect[358,364];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum pennellii BTB/POZ domain-containing protein At5g41330-like (LOC107026727), transcript variant X3, mRNA	4.120879121
VdnRY2_55112	1	1	345	360	uv|JQ394800.1:4781-4893	26	11	Weak	Weak	Suspect[361,364];	NO_DATA	1	1	PREDICTED: Solanum tuberosum leucine--tRNA ligase, cytoplasmic-like (LOC102583300), mRNA	4.120879121
VdnRY1_9310	1	1	6	22	uv|J02400.1:1-5243-49	2921	2905	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 17 (LOC102590225), mRNA	4.407713499
VdnRY1_133767	1	1	343	359	uv|AF379854.1:3-2710	1474	1490	Weak	Weak	Suspect[360,363];	TRUE_BIOLOGICAL	5820	1	Solanum pennellii chromosome ch11, complete genome	4.407713499
CLCdnRY11_74932	1	1	326	341	uv|M77169.1:820-5161	2571	2586	Weak	Weak	Suspect[342,363];	TRUE_BIOLOGICAL	1485	1		4.132231405
VdnRY1_9310	1	1	11	26	uv|J01783.1:4575-7894-49	2906	2921	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	724	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 17 (LOC102590225), mRNA	4.132231405
CLCdnRY1_16725	1	1	4	19	uv|FJ160466.1:1899-7260-49	4378	4363	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum transmembrane emp24 domain-containing protein p24beta3-like (LOC102593710), mRNA	4.132231405
CLCdnRY6_39851	1	1	14	29	uv|EU186086.1:9349-10480-30	902	917	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized protein C630.12-like (LOC102589173), mRNA	4.132231405
CLCdnRY8_32412	1	1	13	28	uv|NGB00587.1:1-3232	3002	3017	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598761 (LOC102598761), transcript variant X2, mRNA	4.132231405
VdnRY6_31741	1	1	1	16	uv|U75992.1:16925-19409	1809	1794	Weak	Weak	None	TRUE_BIOLOGICAL	10375	1	PREDICTED: Solanum tuberosum alpha-amylase-like (LOC102582328), transcript variant X2, mRNA	4.132231405
SdnRY1_58973	1	1	272	312	uv|KF719004.1:2204-2946	73	113	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	11.04972376
SdnRY1_58974	1	1	272	312	uv|KF719004.1:2204-2946	73	113	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	11.04972376
SdnRY1_58975	1	1	272	312	uv|KF719004.1:2204-2946	73	113	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	11.04972376
SdnRY1_58978	1	1	272	312	uv|KF719004.1:2204-2946	73	113	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	11.04972376
SdnRY1_58979	1	1	272	312	uv|KF719004.1:2204-2946	73	113	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	11.04972376
SdnRY1_58980	1	1	272	312	uv|KF719004.1:2204-2946	73	113	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	11.04972376
SdnRY1_58981	1	1	272	312	uv|KF719004.1:2204-2946	73	113	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	11.04972376
SdnRY1_58982	1	1	272	312	uv|KF719004.1:2204-2946	73	113	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	11.04972376
CLCdnRY10_23475	1	1	334	351	uv|J02459.1:1-48502-49	95	78	Weak	Weak	Suspect[352,362];	TRUE_BIOLOGICAL	10699	1	Solanum lycopersicum cultivar I-3 chromosome 10	4.696132597
CLCdnRY7_1481	1	1	344	361	uv|KF853602.1:1019-2932	1666	1683	Weak	Weak	Suspect[362,362];	TRUE_BIOLOGICAL	7711	1	Solanum tuberosum calmodulin 5/6/7/8-like protein mRNA, complete cds	4.696132597
CLCdnRY1_10703	1	1	2	18	uv|L08862.1:1-2039	924	940	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum chromosome 7 clone RHPOTKEY169K08, complete sequence	4.419889503
VdnRY4_5439	1	1	17	33	uv|KF718989.1:2199-3181	435	419	Weak	Weak	Suspect[1,16];Suspect[357,362];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590827 (LOC102590827), mRNA	4.419889503
CLCdnRY6_46521	1	1	15	30	uv|NGB00587.1:1-3232	1175	1190	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102594734 (LOC102594734), mRNA	4.143646409
SdnRY1_59085	1	1	25	40	uv|U02436.1:3152-4436	359	344	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062487 (LOC107062487), ncRNA	4.143646409
CLCdnRY12_39287	1	1	20	35	uv|KC702190.1:1-1136	534	549	Weak	Weak	Suspect[1,19];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum RING-H2 finger protein ATL2 (LOC107063120), mRNA	4.143646409
CLCdnRY12_90525	1	1	337	352	uv|U13843.1:1887-9923	7858	7843	Weak	Weak	Suspect[353,362];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580662 (LOC102580662), transcript variant X3, ncRNA	4.143646409
CLCdnRY4_6889	1	1	339	354	uv|U13843.1:1887-9923	5648	5663	Weak	Weak	Suspect[355,362];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum phosphate transporter PHO1 homolog 3-like (LOC102604110), mRNA	4.143646409
CLCdnRY7_2304	1	1	15	30	uv|AF102576.1:1-3461	3282	3297	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	Solanum chacoense plasma membrane intrinsic protein PIP2 mRNA, complete cds	4.143646409
CLCdnRY7_28345	1	1	19	34	uv|U13864.1:2748-4229-44	220	205	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum chromosome 9 clone RH186C17, complete sequence	4.143646409
VdnRY1_113683	1	1	22	37	uv|KC702219.1:1-1059	519	504	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC107057799 (LOC107057799), transcript variant X2, ncRNA	4.143646409
VdnRY4_5439	1	1	341	356	uv|J02400.1:1-5243-49	1913	1928	Weak	Weak	Suspect[1,16];Suspect[357,362];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590827 (LOC102590827), mRNA	4.143646409
CLCdnRY5_6622	1	1	326	342	uv|L08876.1:690-1006	278	262	Weak	Weak	Suspect[343,361];	NO_DATA	1	1	Solanum tuberosum clone StDT28 cytochrome c mRNA, complete cds	4.432132964
CLCdnRY10_17027	1	1	24	40	uv|M77169.1:820-5161	3761	3745	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum UPF0051 protein ABCI8, chloroplastic-like (LOC102590382), mRNA	4.432132964
CLCdnRY2_54650	1	1	327	343	uv|AB669567.1:641-3111	360	376	Weak	Weak	Suspect[344,361];	NO_DATA	1	1	PREDICTED: Solanum pennellii WPP domain-associated protein-like (LOC107012052), transcript variant X3, mRNA	4.432132964
CLCdnRY11_22594	1	1	345	360	uv|J02459.1:1-48502-49	25311	25326	Weak	Weak	Suspect[361,361];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial (LOC102602262), mRNA	4.155124654
VdnRY6_26331	1	1	328	343	uv|KC702209.1:1-2022	158	173	Weak	Weak	Suspect[344,361];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable methyltransferase PMT14 (LOC102599529), transcript variant X2, mRNA	4.155124654
CLCdnRY11_34951	1	1	333	348	uv|U89935.1:1389-1487	68	53	Weak	Weak	Suspect[349,361];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum pennellii benzyl alcohol O-benzoyltransferase (LOC107024360), mRNA	4.155124654
CLCdnRY12_10057	1	1	8	23	uv|KF719005.1:2205-5132	1648	1663	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum delta(12) oleic acid desaturase FAD2-like (LOC102598608), mRNA	4.155124654
CLCdnRY2_56007	1	1	21	36	uv|JN874480.1:1050-2714	852	837	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	3701	1		4.155124654
VdnRY3_100526	1	1	5	20	uv|U29899.1:1847-4463	953	938	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 24 (LOC102596658), transcript variant X2, mRNA	4.155124654
CLCdnRY10_28372	1	1	323	340	uv|M98046.1:2386-3803	402	419	Weak	Weak	Suspect[341,360];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum EIN3-binding F-box protein 1-like (LOC102604327), mRNA	4.722222222
VdnRY3_69821	1	1	12	28	uv|X06779.1:1-4734	747	763	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum pennellii probable methyltransferase PMT13 (LOC107007951), mRNA	4.444444444
CLCdnRY1_40322	1	1	24	39	uv|AF102576.1:1-3461	3277	3292	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	Solanum pennellii chromosome ch06, complete genome	4.166666667
VdnRY2_29199	1	1	22	37	uv|JN874480.1:11708-20103	7073	7088	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 14-3-3 protein 7 (LOC102581950), mRNA	4.166666667
CLCdnRY8_18269	1	1	337	352	uv|M28248.1:1-1709	486	471	Weak	Weak	Suspect[353,360];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like (LOC102580777), transcript variant X2, mRNA	4.166666667
VdnRY2_29201	1	1	22	37	uv|JN874480.1:11708-20103	7073	7088	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 14-3-3 protein 7 (LOC102581950), mRNA	4.166666667
SdnRY1_59331	1	1	15	32	uv|GU827641.1:1944-2103	68	51	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060628 (LOC107060628), ncRNA	4.735376045
CLCdnRY12_56533	1	1	22	38	uv|KF718989.1:2199-3181	108	124	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	3700	1	Solanum lycopersicum cDNA, clone: LEFL1023BB02, HTC in leaf	4.456824513
CLCdnRY12_42335	1	1	13	28	uv|DQ058733.1:11-150	51	36	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable protein arginine N-methyltransferase 1 (LOC102585349), transcript variant X2, mRNA	4.178272981
CLCdnRY2_21126	1	1	10	25	uv|AF013258.1:940-1118	24	9	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	40674	1	PREDICTED: Solanum tuberosum putative F-box protein At3g10430 (LOC107062293), transcript variant X1, mRNA	4.178272981
VdnRY1_20360	1	1	320	335	uv|DQ317695.1:1340-3572	258	243	Weak	Weak	Suspect[336,359];	TRUE_BIOLOGICAL	620	1	Solanum lycopersicum cultivar I-3 chromosome 10	4.178272981
VdnRY5_565	1	1	320	335	uv|Z32692.1:2323-5137	1591	1606	Weak	Weak	Suspect[336,359];	TRUE_BIOLOGICAL	620	1	Solanum pennellii chromosome ch04, complete genome	4.178272981
CLCdnRY12_20956	1	1	12	30	uv|X06779.1:1-4734	4721	4703	Moderate	Moderate	None	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum uncharacterized protein ycf45 (LOC102605144), mRNA	5.027932961
CLCdnRY1_49556	1	1	22	38	uv|X70276.1:4179-4959	475	459	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized protein At1g51745-like (LOC102596664), mRNA	4.469273743
CLCdnRY12_20956	1	1	1	16	uv|KC702234.1:1-1022	350	365	Weak	Moderate	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized protein ycf45 (LOC102605144), mRNA	4.189944134
CLCdnRY11_51955	1	1	330	345	uv|KF718996.1:2914-4532	132	147	Weak	Weak	Suspect[346,358];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative serine/threonine-protein kinase-like protein CCR3 (LOC102601082), transcript variant X2, mRNA	4.189944134
CLCdnRY1_44314	1	1	12	27	uv|M77169.1:820-5161	3869	3884	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	1485	1	Solanum pennellii chromosome ch05, complete genome	4.189944134
CLCdnRY3_29419	1	1	328	343	uv|NGB00587.1:1-3232	1184	1169	Weak	Weak	Suspect[344,358];	NO_DATA	1	1		4.189944134
CLCdnRY5_57725	1	1	12	27	uv|HM640258.1:317-2913	733	718	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	5073	1	PREDICTED: Solanum tuberosum biotin--protein ligase 2-like (LOC102584525), mRNA	4.189944134
VdnRY1_43860	1	1	16	31	uv|U59231.1:8434-10310-48	1160	1145	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	5658	1	Capsicum pubescens chloroplast, complete genome	4.189944134
CLCdnRY4_58723	1	1	210	250	uv|KF719004.1:2204-2946	73	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS3 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	11.20448179
CLCdnRY3_27372	1	1	16	32	uv|NGB00402.1:644-1577	122	138	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	Solanum tuberosum chromosome 11 clone RH195J04, complete sequence	4.481792717
CLCdnRY9_28781	1	1	16	32	uv|NGB00402.1:644-1577	122	138	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	Solanum tuberosum chromosome 11 clone RH195J04, complete sequence	4.481792717
CLCdnRY2_50272	1	1	19	34	uv|U75992.1:4807-5386	351	366	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 2	4.201680672
VdnRY1_156798	1	1	334	349	uv|M77169.1:820-5161	361	376	Weak	Weak	Suspect[350,357];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum pennellii uncharacterized LOC107004516 (LOC107004516), transcript variant X2, misc_RNA	4.201680672
CLCdnRY1_55850	1	1	16	31	uv|DQ133906.1:2593-3425-49	124	109	Weak	Weak	Suspect[1,15];	NO_DATA	1	1		4.201680672
CLCdnRY5_24817	1	1	338	353	uv|KF718979.1:2206-6730	3666	3651	Weak	Weak	Suspect[354,357];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum pectin acetylesterase 8-like (LOC102593635), mRNA	4.201680672
SdnRY1_59522	1	1	10	25	uv|KM407508.1:753-839	9	24	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized protein At1g04910 (LOC102604866), transcript variant X1, mRNA	4.201680672
VdnRY6_39837	1	1	336	351	uv|U89960.1:4738-7717	879	894	Weak	Weak	Suspect[352,357];	TRUE_BIOLOGICAL	4892	1	Solanum lycopersicum cDNA, clone: LEFL1077CE04, HTC in leaf	4.201680672
VdnRY1_1660	1	1	120	172	uv|KF719004.1:2204-2946	61	113	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 1, chloroplastic-like (LOC102577450), mRNA	14.60674157
SdnRY1_59725	1	1	16	32	uv|X70481.1:3564-4492	256	240	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107063455 (LOC107063455), transcript variant X3, ncRNA	4.494382022
VdnRY7_20572	1	1	341	356	uv|KC702198.1:1-1023	113	98	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii triose phosphate/phosphate translocator, chloroplastic (LOC107002248), mRNA	4.213483146
VdnRY1_13803	1	1	17	32	uv|FJ750577.1:368-2560	593	608	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	4447	1	PREDICTED: Solanum tuberosum uncharacterized LOC102601222 (LOC102601222), mRNA	4.213483146
VdnRY3_21878	1	1	327	342	uv|KC702228.1:1-1023	25	40	Weak	Weak	Suspect[343,356];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum replication protein A 70 kDa DNA-binding subunit B-like (LOC102582531), transcript variant X14, mRNA	4.213483146
VdnRY4_19375	1	1	21	36	uv|AF050464.1:204-355	49	64	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum carboxypeptidase Y (LOC102604152), mRNA	4.213483146
VdnRY7_13277	1	1	329	344	uv|J02459.1:1-48502-49	21813	21828	Weak	Weak	Suspect[345,356];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum prostamide/prostaglandin F synthase (LOC102585914), mRNA	4.213483146
CLCdnRY11_83284	1	1	4	21	uv|NGB00412.1:1-1359	242	259	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum auxin-responsive protein SAUR68-like (LOC107061000), mRNA	4.788732394
CLCdnRY1_46567	1	1	7	23	uv|M35007.1:1-864	704	720	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	Solanum pennellii chromosome ch06, complete genome	4.507042254
CLCdnRY1_57481	1	1	319	335	uv|KY031729.1:6650-6748	55	71	Weak	Weak	Suspect[336,355];	TRUE_BIOLOGICAL	1386	1	Solanum pennellii chromosome ch10, complete genome	4.507042254
CLCdnRY12_36710	1	1	324	340	uv|U89961.1:1-4240	2329	2345	Weak	Weak	Suspect[341,355];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum pyridoxal reductase, chloroplastic (LOC101244752), transcript variant X2, mRNA	4.507042254
CLCdnRY4_62404	1	1	338	354	uv|HM640258.1:3527-5744	164	180	Weak	Weak	Suspect[355,355];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum lycopersicum cytochrome P450 CYP72A219-like (LOC101263726), mRNA	4.507042254
VdnRY1_3437	1	1	6	22	uv|JF909482.1:3850-8059	1719	1703	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum pennellii delta(12)-fatty-acid desaturase FAD2-like (LOC107007614), transcript variant X1, mRNA	4.507042254
CLCdnRY11_65843	1	1	18	33	uv|EF456735.1:7106-7196	62	77	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum glycine-rich cell wall structural protein 1.0-like (LOC107058936), mRNA	4.225352113
CLCdnRY3_23454	1	1	320	335	uv|HM640258.1:3527-5744	1286	1301	Weak	Weak	Suspect[336,355];	TRUE_BIOLOGICAL	5052	1	Solanum pennellii chromosome ch03, complete genome	4.225352113
VdnRY1_121592	1	1	334	349	uv|X51450.1:2521-3852	711	726	Weak	Weak	Suspect[350,355];	TRUE_BIOLOGICAL	91061	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602653 (LOC102602653), mRNA	4.225352113
VdnRY7_9661	1	1	17	32	uv|EU496101.1:2181-2269	43	58	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581330 (LOC102581330), mRNA	4.225352113
SdnRY1_59959	1	1	20	36	uv|JN581377.1:606-767	115	131	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum chromosome ch01, complete genome	4.519774011
CLCdnRY10_4658	1	1	20	35	uv|AY568055.1:6692-7837	199	214	Weak	Weak	Suspect[1,19];Suspect[351,354];	NO_DATA	1	1	PREDICTED: Solanum tuberosum rac-like GTP-binding protein 5 (LOC102598995), mRNA	4.237288136
CLCdnRY10_4658	1	1	335	350	uv|KM062047.1:4179-4302	74	59	Weak	Weak	Suspect[1,19];Suspect[351,354];	NO_DATA	1	1	PREDICTED: Solanum tuberosum rac-like GTP-binding protein 5 (LOC102598995), mRNA	4.237288136
CLCdnRY3_4418	1	1	335	350	uv|U13860.1:6124-7626-49	191	176	Weak	Weak	Suspect[351,354];	TRUE_BIOLOGICAL	140052	1	PREDICTED: Solanum tuberosum 40S ribosomal protein S11-like (LOC102585207), mRNA	4.237288136
VdnRY1_136881	1	1	327	342	uv|AY568055.1:6692-7837	96	111	Weak	Weak	Suspect[343,354];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ankyrin repeat domain-containing protein 13A (LOC102591768), transcript variant X3, mRNA	4.237288136
VdnRY4_57740	1	1	338	353	uv|KC702236.1:1-1024	217	202	Weak	Weak	Suspect[354,354];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable carboxylesterase 2 (LOC102602233), mRNA	4.237288136
CLCdnRY9_30620	1	1	160	312	uv|JF909467.1:4676-4959	214	58	Strong	Strong	Suspect[313,353];	NO_DATA	1	1	Potato light-inducible tissue-specific ST-LS1 gene	43.05949008
VdnRY1_23210	1	1	4	22	uv|U67875.1:6835-8216	941	959	Moderate	Moderate	Suspect[1,3];	TRUE_BIOLOGICAL	4895	1	Solanum lycopersicum cultivar I-3 chromosome 3	5.099150142
VdnRY6_31777	1	1	12	28	uv|J02400.1:1-5243-49	2921	2905	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum prostatic spermine-binding protein-like (LOC107061103), mRNA	4.532577904
CLCdnRY11_47045	1	1	330	345	uv|HM162842.2:1904-2262	49	34	Weak	Weak	Suspect[346,353];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum probable 2-carboxy-D-arabinitol-1-phosphatase (LOC102592219), mRNA	4.249291785
CLCdnRY12_64516	1	1	334	349	uv|NGB00620.1:1854-2089	7	22	Weak	Weak	Suspect[350,353];	TRUE_BIOLOGICAL	4930	1		4.249291785
CLCdnRY12_81029	1	1	25	40	uv|KF680544.1:323-942	516	501	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 9	4.249291785
VdnRY1_64706	1	1	330	345	uv|U16857.1:2678-3227	331	346	Weak	Weak	Suspect[346,353];	TRUE_BIOLOGICAL	620	1	Solanum lycopersicum cultivar I-3 chromosome 2	4.249291785
VdnRY1_130127	1	1	314	329	uv|JF909482.1:3850-8059	3906	3921	Weak	Weak	Suspect[330,353];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597707 (LOC102597707), transcript variant X2, mRNA	4.249291785
VdnRY2_4587	1	1	324	339	uv|L00595.1:1-393	370	355	Weak	Weak	Suspect[340,353];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC107057847 (LOC107057847), mRNA	4.249291785
VdnRY4_44983	1	1	5	20	uv|M28248.1:1-1709	1481	1496	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	153135	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g26790, mitochondrial (LOC102582865), transcript variant X8, misc_RNA	4.249291785
CLCdnRY10_81368	1	1	314	329	uv|M74186.1:2188-2959	273	258	Weak	Weak	Suspect[330,353];	TRUE_BIOLOGICAL	1279	1		4.249291785
CLCdnRY11_72854	1	1	17	32	uv|JX560397.1:83-5970	4514	4499	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	1236	1		4.249291785
CLCdnRY3_29412	1	1	317	332	uv|Z22671.1:1221-1388	31	16	Weak	Weak	Suspect[333,353];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	4.249291785
VdnRY1_100387	1	1	329	344	uv|JX573201.1:3249-3345	20	5	Weak	Weak	Suspect[345,353];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604540 (LOC102604540), mRNA	4.249291785
VdnRY2_29200	1	1	22	37	uv|JN874480.1:11708-20103	7073	7088	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 14-3-3 protein 7 (LOC102581950), mRNA	4.249291785
VdnRY1_75799	1	1	329	346	uv|KF680545.1:1-2837	980	997	Weak	Weak	Suspect[347,352];	NO_DATA	1	1	Solanum pennellii chromosome ch07, complete genome	4.829545455
SdnRY1_60182	1	1	23	39	uv|M16217.1:3121-3879-49	496	480	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum probable leucine-rich repeat receptor-like protein kinase At1g35710 (LOC102583509), partial mRNA	4.545454545
VdnRY1_97599	1	1	317	333	uv|DQ493881.2:2963-3059	35	19	Weak	Weak	Suspect[334,352];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum exosome complex exonuclease RRP46 homolog (LOC102597142), mRNA	4.545454545
VdnRY4_42681	1	1	25	40	uv|GU827641.1:1944-2103	50	65	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 57 (LOC102586674), transcript variant X2, mRNA	4.261363636
VdnRY7_10313	1	1	1	16	uv|HQ418395.1:7430-7530	72	57	Weak	Weak	Suspect[17,17];	TRUE_BIOLOGICAL	4930	1	Solanum tuberosum 26S proteasome subunit 4-like (LOC102577756), mRNA<>Solanum tuberosum clone 115D06 26S proteasome subunit 4-like mRNA, complete cds	4.261363636
VdnRY7_10313	1	1	18	33	uv|JN874480.1:11708-20103	4769	4784	Weak	Weak	Suspect[17,17];	TRUE_BIOLOGICAL	357	1	Solanum tuberosum 26S proteasome subunit 4-like (LOC102577756), mRNA<>Solanum tuberosum clone 115D06 26S proteasome subunit 4-like mRNA, complete cds	4.261363636
CLCdnRY1_36774	1	1	332	348	uv|U02436.1:3152-4436	666	682	Weak	Weak	Suspect[349,351];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580363 (LOC102580363), mRNA	4.558404558
CLCdnRY3_8724	1	1	326	342	uv|KF719014.1:2590-2954	215	199	Weak	Weak	Suspect[343,351];	TRUE_BIOLOGICAL	163743	1	PREDICTED: Nicotiana tomentosiformis ribulose bisphosphate carboxylase small chain, chloroplastic (LOC104103374), mRNA	4.558404558
CLCdnRY9_46861	1	1	332	348	uv|U02436.1:3152-4436	666	682	Weak	Weak	Suspect[349,351];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580363 (LOC102580363), mRNA	4.558404558
CLCdnRY7_18435	1	1	336	351	uv|NGB01025.1:1-55	35	50	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum cellulose synthase-like protein G3 (LOC102604929), mRNA	4.273504274
CLCdnRY12_53085	1	1	9	24	uv|DQ883653.3:1-644	151	136	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	Methylobacterium brachiatum strain TX0642 chromosome	4.273504274
VdnRY4_61048	1	1	14	29	uv|JF909482.1:3850-8059	3577	3562	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581510 (LOC102581510), transcript variant X2, mRNA	4.273504274
CLCdnRY9_23314	1	1	12	29	uv|U67875.1:18-1316	734	717	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum pennellii malonyl-coenzyme:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase-like (LOC107032570), mRNA	4.857142857
CLCdnRY1_43608	1	1	322	337	uv|KM407505.1:939-2365	631	646	Weak	Weak	Suspect[338,350];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 12	4.285714286
CLCdnRY8_2827	1	1	333	348	uv|X13003.1:2753-4028	318	333	Weak	Weak	Suspect[349,350];	TRUE_BIOLOGICAL	561	1	PREDICTED: Solanum tuberosum dihydroorotase, mitochondrial (LOC102595472), transcript variant X4, mRNA	4.285714286
CLCdnRY6_86863	1	1	23	38	uv|LC121520.1:4008-4664	187	172	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1279	1	Tydeidae gen. sp. AD1284 voucher UMMZ BMOC 08-0807-006 AD1284 28S ribosomal RNA gene, partial sequence	4.285714286
CLCdnRY7_2336	1	1	23	38	uv|X06779.1:1-4734	4347	4332	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum indole-3-acetic acid-amido synthetase GH3.6-like (LOC102584700), transcript variant X6, mRNA	4.285714286
CLCdnRY8_54386	1	1	21	36	uv|EF437940.1:7199-10690-48	2110	2095	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604569 (LOC102604569), mRNA	4.285714286
SdnRY1_60517	1	1	3	18	uv|EU546814.1:7770-7919	64	49	Weak	Weak	Suspect[1,2];	NO_DATA	1	1		4.285714286
VdnRY4_12030	1	1	328	343	uv|KM407512.1:886-4985	3652	3637	Weak	Weak	Suspect[344,350];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum auxin-responsive protein IAA27-like (LOC102595402), mRNA	4.285714286
VdnRY5_41683	1	1	18	33	uv|EU546816.1:3419-3615	124	139	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum BTB/POZ domain-containing protein POB1-like (LOC102602997), transcript variant X3, mRNA	4.285714286
CLCdnRY12_56338	1	1	3	24	uv|KM062044.1:2507-3208	543	564	Moderate	Moderate	Suspect[1,2];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588141 (LOC102588141), transcript variant X2, mRNA	6.017191977
CLCdnRY3_75823	1	1	321	337	uv|KC614689.1:1-590	135	151	Weak	Weak	Suspect[338,349];	TRUE_BIOLOGICAL	4930	1		4.584527221
CLCdnRY2_63541	1	1	315	330	uv|AF151088.1:607-1233	314	299	Weak	Weak	Suspect[331,349];	TRUE_BIOLOGICAL	4930	1		4.297994269
CLCdnRY5_55524	1	1	333	348	uv|Z22761.1:1-5585	1750	1765	Weak	Weak	Suspect[349,349];	TRUE_BIOLOGICAL	11632	1	PREDICTED: Solanum pennellii protein SHOOT GRAVITROPISM 5-like (LOC107012333), transcript variant X2, mRNA	4.297994269
VdnRY3_89775	1	1	21	36	uv|L08862.1:1-2039	1710	1725	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum cytochrome P450 98A2-like (LOC102590870), mRNA	4.297994269
VdnRY4_43897	1	1	11	26	uv|AY217101.1:3918-4201	199	214	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum extensin-3-like (LOC102583036), transcript variant X2, mRNA	4.297994269
CLCdnRY8_26295	1	1	22	41	uv|NGB00052.1:2042-2164	68	87	Moderate	Moderate	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 (LOC102588603), mRNA	5.459770115
VdnRY1_113106	1	1	1	18	uv|JN874480.1:1050-2714	927	944	Weak	Weak	None	TRUE_BIOLOGICAL	3701	1	PREDICTED: Capsicum annuum UMP-CMP kinase (LOC107863418), mRNA	4.885057471
VdnRY4_56181	1	1	322	338	uv|KM407506.1:2354-4632	2079	2063	Weak	Weak	Suspect[339,348];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum vacuolar protein sorting-associated protein 35B-like (LOC102587668), mRNA	4.597701149
CLCdnRY3_27803	1	1	315	331	uv|KM407508.1:3392-3619	53	69	Weak	Weak	Suspect[332,348];	TRUE_ARTIFICIAL	81077	81077	Solanum pennellii chromosome ch03, complete genome	4.597701149
CLCdnRY5_7999	1	1	9	24	uv|KF719007.1:2203-2693	257	272	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum tuberosum mitochondrial adenine nucleotide transporter ADNT1-like (LOC102596075), mRNA	4.310344828
CLCdnRY12_7224	1	1	8	23	uv|JX025642.1:7290-7461	100	85	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	Solanum pennellii chromosome ch07, complete genome	4.310344828
CLCdnRY3_66827	1	1	21	36	uv|KF718979.1:2206-6730	2140	2155	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Capsicum annuum protein FANTASTIC FOUR 3-like (LOC107856850), mRNA	4.310344828
CLCdnRY4_61823	1	1	322	337	uv|HQ418395.1:2834-3936	801	786	Weak	Weak	Suspect[338,348];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cytochrome c-type biogenesis protein CcmE-like (LOC102606066), transcript variant X3, mRNA	4.310344828
CLCdnRY8_23154	1	1	328	343	uv|AB095955.1:2407-3399	516	531	Weak	Weak	Suspect[344,348];	NO_DATA	1	1	PREDICTED: Solanum tuberosum formin-like protein 2 (LOC102595554), mRNA	4.310344828
VdnRY3_36901	1	1	333	348	uv|Z50148.1:1-178	60	45	Weak	Weak	None	NO_DATA	1	1	Solanum pennellii chromosome ch05, complete genome	4.310344828
VdnRY2_16043	1	1	10	26	uv|KC702236.1:1-1024	624	640	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 4	4.610951009
CLCdnRY10_61657	1	1	327	343	uv|KY031733.1:1-4952	514	530	Weak	Weak	Suspect[344,347];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum structural maintenance of chromosomes protein 2-1 (LOC102595146), mRNA	4.610951009
VdnRY2_118307	1	1	322	338	uv|JX181778.1:10266-10316-48	1	17	Weak	Weak	Suspect[339,347];	NO_DATA	1	1	Solanum pennellii chromosome ch12, complete genome	4.610951009
CLCdnRY1_35838	1	1	310	325	uv|J02459.1:1-48502-49	2580	2595	Weak	Weak	Suspect[326,347];	TRUE_BIOLOGICAL	10699	1	Solanum lycopersicum cultivar I-3 chromosome 8	4.322766571
VdnRY2_106831	1	1	328	343	uv|U74374.1:2356-2450-49	8	23	Weak	Weak	Suspect[344,347];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	4.322766571
CLCdnRY10_11179	1	1	324	339	uv|U55760.1:1-2749	2332	2317	Weak	Weak	Suspect[340,347];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum glycine-rich cell wall structural protein-like (LOC107061045), mRNA	4.322766571
CLCdnRY10_34948	1	1	16	31	uv|JF909482.1:3850-8059	2194	2179	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602383 (LOC102602383), ncRNA	4.322766571
CLCdnRY6_78106	1	1	321	336	uv|J02482.1:1-5386-49	1653	1668	Weak	Weak	Suspect[337,347];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum TMV resistance protein N-like (LOC102600816), mRNA	4.322766571
CLCdnRY8_11353	1	1	19	34	uv|JX560397.1:83-5970	2311	2326	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	1236	1	Solanum bulbocastanum clone BAC UW117J16 chromosome 8, complete sequence	4.322766571
VdnRY4_52043	1	1	320	335	uv|KP126802.1:8623-13621-38	2231	2246	Weak	Weak	Suspect[336,347];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum heterogeneous nuclear ribonucleoprotein A1-like (LOC102605451), mRNA	4.322766571
CLCdnRY8_36328	1	1	310	327	uv|HM162846.2:614-1656	635	652	Weak	Weak	Suspect[328,346];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cyclin-L1-1 (LOC102586704), transcript variant X3, misc_RNA	4.913294798
VdnRY1_15125	1	1	25	41	uv|V00604.2:1-6407-49	4971	4987	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	10861	1	Cutibacterium acnes strain FDAARGOS_503 chromosome, complete genome	4.624277457
VdnRY1_12615	1	1	313	329	uv|AF379854.1:3-2710	1907	1923	Weak	Weak	Suspect[332,346];	NO_DATA	1	1	Solanum tuberosum clone BAC BC206B16 sequence	4.624277457
SdnRY1_61158	1	1	22	37	uv|Z32692.1:2323-5137	602	587	Weak	Weak	Suspect[1,21];Suspect[338,346];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum putative ubiquitin-conjugating enzyme E2 38 (LOC102595328), mRNA	4.335260116
SdnRY1_61158	1	1	322	337	uv|DQ883689.3:1-1994	1166	1151	Weak	Weak	Suspect[1,21];Suspect[338,346];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative ubiquitin-conjugating enzyme E2 38 (LOC102595328), mRNA	4.335260116
VdnRY1_33402	1	1	320	335	uv|U29899.1:4697-5948	64	79	Weak	Weak	Suspect[336,346];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum 50S ribosomal protein L17-like (LOC102584866), mRNA	4.335260116
CLCdnRY10_62543	1	1	308	323	uv|AF379854.1:3-2710	2019	2004	Weak	Weak	Suspect[324,346];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062276 (LOC107062276), ncRNA	4.335260116
CLCdnRY3_24384	1	1	9	24	uv|JN874480.1:1050-2714	1029	1044	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum probable carboxylesterase 13 (LOC107060381), mRNA	4.335260116
CLCdnRY7_28309	1	1	15	30	uv|JF909482.1:3850-8059	2194	2179	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602383 (LOC102602383), ncRNA	4.335260116
SdnRY1_61178	1	1	320	335	uv|KC702212.1:1-1136	84	69	Weak	Weak	Suspect[336,346];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum TMV resistance protein N-like (LOC107059430), mRNA	4.335260116
VdnRY1_12615	1	1	316	331	uv|Z22671.1:1221-1388	29	14	Weak	Weak	Suspect[332,346];	NO_DATA	1	1	Solanum tuberosum clone BAC BC206B16 sequence	4.335260116
VdnRY2_49258	1	1	312	327	uv|JF909467.1:4676-4959	114	99	Weak	Weak	Suspect[328,346];	NO_DATA	1	1	Solanum tuberosum clone BAC BC206B16 sequence	4.335260116
VdnRY2_99813	1	1	328	343	uv|M16217.1:1-2529	182	167	Weak	Weak	Suspect[344,346];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein ZINC INDUCED FACILITATOR-LIKE 1-like (LOC102592224), transcript variant X3, mRNA	4.335260116
VdnRY4_23137	1	1	23	38	uv|NGB00587.1:1-3232	2067	2052	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587298 (LOC102587298), transcript variant X2, mRNA	4.335260116
VdnRY7_5601	1	1	6	21	uv|KC702222.1:1-1033	759	744	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	33958	1	PREDICTED: Solanum tuberosum calvin cycle protein CP12-1, chloroplastic (LOC102594918), mRNA	4.335260116
SdnRY1_61305	1	1	19	343	uv|J01749.1:1-4361-49	2254	2578	Strong	Strong	Suspect[1,18];Suspect[344,345];	TRUE_BIOLOGICAL	460517	1	Cloning vector pPS-NR, complete sequence	93.91304348
CLCdnRY12_47612	1	1	10	32	uv|J02400.1:1-5243-49	2124	2102	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like (LOC102598587), transcript variant X1, mRNA	6.376811594
CLCdnRY11_70369	1	1	329	345	uv|M16192.1:1-2517-49	874	890	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum chromosome 7 clone RH190I20, complete sequence	4.637681159
CLCdnRY12_32451	1	1	315	331	uv|AF327712.1:1582-7289	4217	4233	Weak	Weak	Suspect[332,345];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum NEDD8-conjugating enzyme Ubc12-like (LOC102598117), transcript variant X2, mRNA	4.637681159
VdnRY3_34317	1	1	2	18	uv|M98046.1:2386-3803	811	795	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum putative disease resistance protein RGA3 (LOC102590697), mRNA	4.637681159
CLCdnRY11_30117	1	1	8	23	uv|KY031735.1:1-4680	1812	1827	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum superoxide dismutase [Fe] 3, chloroplastic (LOC102589895), transcript variant X2, mRNA	4.347826087
CLCdnRY9_63182	1	1	18	33	uv|M28829.1:1-8684-49	3022	3007	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	561	1		4.347826087
CLCdnRY10_11180	1	1	4	19	uv|U55760.1:1-2749	2317	2332	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum glycine-rich cell wall structural protein-like (LOC107061045), mRNA	4.347826087
CLCdnRY10_73665	1	1	306	321	uv|NGB00028.1:2102-2197	89	74	Weak	Weak	Suspect[322,345];	NO_DATA	1	1	Solanum tuberosum clone RH066A20, complete sequence	4.347826087
CLCdnRY12_32451	1	1	307	322	uv|KF718989.1:2199-3181	91	76	Weak	Weak	Suspect[332,345];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum NEDD8-conjugating enzyme Ubc12-like (LOC102598117), transcript variant X2, mRNA	4.347826087
CLCdnRY12_69844	1	1	320	335	uv|KC702228.1:1-1023	67	82	Weak	Weak	Suspect[336,345];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584423 (LOC102584423), mRNA	4.347826087
CLCdnRY2_26336	1	1	1	16	uv|KY031737.1:1-5023	1290	1305	Weak	Weak	None	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum disease resistance protein RPP13-like (LOC102585994), mRNA	4.347826087
CLCdnRY7_20958	1	1	16	31	uv|DQ391279.1:1-10285	5318	5303	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum transmembrane protein 184A (LOC102600400), transcript variant X2, mRNA	4.347826087
CLCdnRY9_46652	1	1	7	22	uv|JX560397.1:83-5970	3517	3532	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum pennellii G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 (LOC107025882), transcript variant X3, mRNA	4.347826087
SdnRY1_61222	1	1	328	343	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[344,345];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch02, complete genome	4.347826087
SdnRY1_61223	1	1	328	343	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[344,345];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch02, complete genome	4.347826087
SdnRY1_61224	1	1	328	343	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[344,345];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch02, complete genome	4.347826087
SdnRY1_61225	1	1	328	343	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[344,345];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch02, complete genome	4.347826087
SdnRY1_61226	1	1	328	343	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[344,345];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch02, complete genome	4.347826087
SdnRY1_61227	1	1	328	343	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[344,345];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch02, complete genome	4.347826087
VdnRY5_28726	1	1	312	327	uv|U09128.1:3334-10218	709	724	Weak	Weak	Suspect[328,345];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum calcineurin B-like protein 10 (LOC102595606), mRNA	4.347826087
CLCdnRY10_44021	1	1	25	40	uv|JF909482.1:3850-8059	2585	2600	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.360465116
CLCdnRY11_36188	1	1	13	28	uv|JF909482.1:3850-8059	2194	2179	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602383 (LOC102602383), ncRNA	4.360465116
CLCdnRY12_68719	1	1	25	40	uv|DQ666274.1:249-3225	1507	1492	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum receptor-like protein kinase HERK 1 (LOC102604283), mRNA	4.360465116
CLCdnRY6_70053	1	1	25	40	uv|DQ666274.1:249-3225	1507	1492	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum receptor-like protein kinase HERK 1 (LOC102604283), mRNA	4.360465116
CLCdnRY8_51618	1	1	8	23	uv|JQ394799.1:1-1559	1477	1492	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase SAPK1-like (LOC102590012), transcript variant X1, mRNA	4.360465116
CLCdnRY8_51618	1	1	10	25	uv|KF718989.1:2199-3181	77	92	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase SAPK1-like (LOC102590012), transcript variant X1, mRNA	4.360465116
SdnRY1_61447	1	1	317	332	uv|KY031736.1:1-4885	1836	1821	Weak	Weak	Suspect[333,344];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592641 (LOC102592641), ncRNA	4.360465116
VdnRY1_36580	1	1	326	341	uv|M18328.1:1541-1636	45	60	Weak	Weak	Suspect[342,344];	NO_DATA	1	1	PREDICTED: Solanum tuberosum tryptophan synthase beta chain 1 (LOC102588810), mRNA	4.360465116
CLCdnRY5_83549	1	1	4	21	uv|NGB00412.1:1-1359	242	259	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Solanum tuberosum auxin-responsive protein SAUR68-like (LOC107061000), mRNA	4.956268222
CLCdnRY8_16514	1	1	19	36	uv|Z46234.1:664-3443	2571	2588	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	4892	1	Solanum lycopersicum cultivar I-3 chromosome 12	4.956268222
VdnRY3_60736	1	1	10	26	uv|JQ394799.1:1-1559	1496	1480	Weak	Weak	Suspect[1,9];	NO_DATA	1	1		4.664723032
VdnRY1_58590	1	1	304	319	uv|L05669.1:1-1770	910	895	Weak	Weak	Suspect[320,343];	TRUE_BIOLOGICAL	620	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.373177843
CLCdnRY10_40911	1	1	5	20	uv|KC702198.1:1-1023	522	537	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii receptor-like protein kinase HSL1 (LOC107017804), mRNA	4.373177843
CLCdnRY3_64528	1	1	304	319	uv|NGB00028.1:2102-2197	89	74	Weak	Weak	Suspect[320,343];	NO_DATA	1	1	Solanum tuberosum clone RH066A20, complete sequence	4.373177843
VdnRY4_63874	1	1	23	38	uv|KC702219.1:1-1059	522	507	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum BOI-related E3 ubiquitin-protein ligase 1-like (LOC102602558), mRNA	4.373177843
VdnRY3_71304	1	1	305	323	uv|KF718979.1:2206-6730	810	792	Moderate	Moderate	Suspect[324,342];	TRUE_BIOLOGICAL	3701	1		5.263157895
VdnRY1_30954	1	1	313	329	uv|KC702165.1:1-1023	558	574	Weak	Weak	Suspect[330,342];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum U-box domain-containing protein 5 (LOC102583140), transcript variant X2, mRNA	4.678362573
CLCdnRY10_32757	1	1	25	40	uv|U13843.1:1887-9923	4752	4737	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101251591 (LOC101251591), transcript variant X3, mRNA	4.385964912
CLCdnRY3_27240	1	1	314	329	uv|L08862.1:1-2039	1698	1713	Weak	Weak	Suspect[330,342];	TRUE_BIOLOGICAL	1279	1	Solanum chacoense SWIb domain-containing protein (SWIb2) mRNA, complete cds	4.385964912
CLCdnRY5_64334	1	1	25	40	uv|M28248.1:1-1709	274	259	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum lipid droplet-associated hydrolase (LOC102585600), transcript variant X2, mRNA	4.385964912
VdnRY1_88576	1	1	9	24	uv|KF718979.1:2206-6730	481	466	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 11	4.385964912
CLCdnRY3_463	1	1	94	146	uv|KF719004.1:2204-2946	113	61	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	15.24926686
CLCdnRY10_82588	1	1	11	27	uv|GU593054.1:1-1305	218	234	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum piezo-type mechanosensitive ion channel homolog (LOC102605335), transcript variant X2, mRNA	4.692082111
SdnRY1_61942	1	1	319	335	uv|L08862.1:2848-3728-49	162	146	Weak	Weak	Suspect[336,341];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum phosphate transporter PHO1 homolog 3-like (LOC102604451), mRNA	4.692082111
CLCdnRY12_67038	1	1	311	327	uv|M35007.1:5507-6428	607	623	Weak	Weak	Suspect[328,341];	NO_DATA	1	1	PREDICTED: Solanum tuberosum truncated transcription factor CAULIFLOWER A-like (LOC102605812), mRNA	4.692082111
CLCdnRY2_33304	1	1	23	38	uv|X65279.1:5941-7353	279	264	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein DETOXIFICATION 49 (LOC102587302), mRNA	4.398826979
SdnRY1_61960	1	1	23	38	uv|KM407513.1:2556-2659	70	85	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061525 (LOC107061525), ncRNA	4.398826979
VdnRY1_119355	1	1	322	339	uv|AF379854.1:3-2710	1862	1879	Weak	Weak	Suspect[340,340];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum putative germin-like protein 2-1 (LOC102599162), mRNA	5
CLCdnRY1_90	1	1	301	317	uv|KF718989.1:2199-3181	124	108	Weak	Weak	Suspect[318,340];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586362 (LOC102586362), mRNA	4.705882353
SdnRY1_62065	1	1	325	340	uv|X05261.1:1-181	69	84	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum pennellii probable LRR receptor-like serine/threonine-protein kinase At5g63710 (LOC107020602), transcript variant X1, mRNA	4.411764706
CLCdnRY12_29940	1	1	17	32	uv|KM407512.1:886-4985	1114	1099	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum 60S ribosomal protein L35 (LOC102598040), mRNA	4.411764706
SdnRY1_62208	1	1	22	37	uv|KF719014.1:2590-2954	191	206	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	163743	1	Solanum lycopersicum cultivar I-3 chromosome 2	4.411764706
VdnRY3_41879	1	1	1	16	uv|AY568055.1:6692-7837	687	672	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein disulfide isomerase-like 5-2 (LOC102593267), mRNA	4.411764706
VdnRY5_21525	1	1	320	335	uv|AF379854.1:3-2710	683	698	Weak	Weak	Suspect[336,340];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum pennellii early nodulin-like protein 2 (LOC107024441), mRNA	4.411764706
SdnRY1_62360	1	1	24	40	uv|JN874480.1:1050-2714	502	486	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum beta-1,3-galactosyltransferase 7-like (LOC102591908), transcript variant X3, misc_RNA	4.719764012
CLCdnRY10_53403	1	1	316	332	uv|KC702182.1:1-1023	617	601	Weak	Weak	Suspect[333,339];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable indole-3-acetic acid-amido synthetase GH3.5 (LOC102603612), transcript variant X2, mRNA	4.719764012
VdnRY2_6200	1	1	7	23	uv|AF129072.1:907-3477	1847	1831	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum trihelix transcription factor GT-3b-like (LOC102591120), mRNA	4.719764012
VdnRY3_7256	1	1	2	18	uv|M98046.1:2386-3803	772	756	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593752 (LOC102593752), mRNA	4.719764012
CLCdnRY10_46643	1	1	317	332	uv|U02447.1:1-1009	139	124	Weak	Weak	Suspect[333,339];	TRUE_BIOLOGICAL	186765	1	PREDICTED: Solanum tuberosum uncharacterized calcium-binding protein At1g02270 (LOC102594109), transcript variant X2, mRNA	4.424778761
CLCdnRY3_68408	1	1	321	336	uv|U75992.1:16925-19409	711	726	Weak	Weak	Suspect[337,339];	TRUE_BIOLOGICAL	10375	1	Solanum tuberosum, complete sequence	4.424778761
CLCdnRY10_76367	1	1	307	322	uv|L05081.1:2594-3343	372	357	Weak	Weak	Suspect[323,339];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 3	4.424778761
CLCdnRY5_13231	1	1	5	20	uv|JX025642.1:5090-5607	209	194	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592452 (LOC102592452), mRNA	4.424778761
CLCdnRY8_12547	1	1	304	319	uv|EU918604.1:599-689	38	53	Weak	Weak	Suspect[320,339];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584998 (LOC102584998), mRNA	4.424778761
VdnRY1_88299	1	1	18	33	uv|U67875.1:6835-8216	285	300	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum pennellii uncharacterized LOC107005103 (LOC107005103), transcript variant X1, mRNA	4.424778761
CLCdnRY1_11997	1	1	305	322	uv|AB215109.1:1703-1800	83	66	Weak	Weak	Suspect[323,338];	NO_DATA	1	1	Solanum pennellii chromosome ch05, complete genome	5.029585799
CLCdnRY12_48151	1	1	11	26	uv|AY423865.1:2659-2760	52	67	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein MOR1 (LOC102605395), transcript variant X2, mRNA	4.437869822
CLCdnRY6_70460	1	1	304	319	uv|X65316.2:695-984	154	169	Weak	Weak	Suspect[320,338];	TRUE_BIOLOGICAL	7049	1	PREDICTED: Solanum tuberosum uncharacterized LOC102605289 (LOC102605289), mRNA	4.437869822
CLCdnRY7_55525	1	1	6	22	uv|J02459.1:1-48502-49	27247	27231	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch09, complete genome	4.747774481
CLCdnRY11_3621	1	1	12	27	uv|M13163.1:477-1287	40	55	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein CURVATURE THYLAKOID 1B, chloroplastic (LOC102602283), mRNA	4.451038576
SdnRY1_62647	1	1	309	324	uv|U13843.1:1887-9923	410	425	Weak	Weak	Suspect[325,337];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase TOR-like (LOC102584801), transcript variant X50, misc_RNA	4.451038576
CLCdnRY12_94523	1	1	16	31	uv|KF719005.1:2205-5132	2300	2315	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch12, complete genome	4.451038576
CLCdnRY2_27113	1	1	301	316	uv|U02447.1:1-1009	359	344	Weak	Weak	Suspect[317,337];	TRUE_BIOLOGICAL	186765	1	Solanum tuberosum beta-(1,2)-xylosyltransferase-like (LOC102594653), mRNA<>Solanum tuberosum mRNA for Beta-1,2-xylosyltransferase (xt1 gene)	4.451038576
SdnRY1_62576	1	1	320	335	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[336,337];	TRUE_BIOLOGICAL	10699	1	Solanum lycopersicum cultivar I-3 chromosome 2	4.451038576
VdnRY1_23874	1	1	24	39	uv|JN874480.1:11708-20103	7073	7088	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 14-3-3 protein 7 (LOC102581950), mRNA	4.451038576
CLCdnRY12_34106	1	1	298	314	uv|U64448.1:417-935	172	188	Weak	Weak	Suspect[315,336];	TRUE_BIOLOGICAL	10358	1	Solanum lycopersicum cultivar I-3 chromosome 2	4.761904762
CLCdnRY2_14164	1	1	298	314	uv|M35007.1:5507-6428	287	271	Weak	Weak	Suspect[315,336];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative disease resistance RPP13-like protein 1 (LOC102599213), transcript variant X2, mRNA	4.761904762
VdnRY3_31442	1	1	21	37	uv|KF718979.1:2206-6730	4055	4039	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590733 (LOC102590733), mRNA	4.761904762
CLCdnRY10_68360	1	1	311	326	uv|DQ867071.1:2191-2316	57	42	Weak	Weak	Suspect[327,336];	NO_DATA	1	1	PREDICTED: Solanum tuberosum UDP-glucose flavonoid 3-O-glucosyltransferase 7-like (LOC102581928), mRNA	4.464285714
CLCdnRY10_68760	1	1	19	34	uv|M77169.1:820-5161	3615	3600	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	1485	1	Solanum pennellii chromosome ch08, complete genome	4.464285714
VdnRY1_23873	1	1	24	39	uv|JN874480.1:11708-20103	7073	7088	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 14-3-3 protein 7 (LOC102581950), mRNA	4.464285714
VdnRY1_23875	1	1	24	39	uv|JN874480.1:11708-20103	7073	7088	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 14-3-3 protein 7 (LOC102581950), mRNA	4.464285714
VdnRY2_122876	1	1	303	318	uv|L08860.1:1-1129	306	291	Weak	Weak	Suspect[319,336];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 5 (LOC102605870), transcript variant X2, mRNA	4.464285714
CLCdnRY12_79636	1	1	24	41	uv|KC702165.1:1-1023	144	161	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum stellacyanin-like (LOC102595852), mRNA	5.074626866
CLCdnRY1_30798	1	1	10	26	uv|U02452.1:2051-2147	45	61	Weak	Weak	Suspect[1,9];Suspect[331,335];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 (LOC102577899), mRNA	4.776119403
CLCdnRY10_56821	1	1	300	315	uv|KC702209.1:1-2022	1418	1403	Weak	Weak	Suspect[316,335];	TRUE_BIOLOGICAL	196118	1	Solanum tuberosum clone RH141P18, complete sequence	4.47761194
CLCdnRY1_30798	1	1	315	330	uv|KC702231.1:1-1021	918	903	Weak	Weak	Suspect[1,9];Suspect[331,335];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 (LOC102577899), mRNA	4.47761194
SdnRY1_63043	1	1	19	34	uv|KF718979.1:2206-6730	698	683	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	3701	1		4.47761194
VdnRY2_34267	1	1	23	38	uv|X53127.1:443-904	152	137	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	6237	1	Solanum pennellii chromosome ch09, complete genome	4.47761194
VdnRY2_104199	1	1	312	327	uv|KC702178.1:1-2022	1864	1879	Weak	Weak	Suspect[328,335];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 5	4.47761194
CLCdnRY10_33937	1	1	8	23	uv|X70477.1:2926-2992	51	66	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum RING-H2 finger protein ATL34 (LOC101268225), mRNA	4.47761194
CLCdnRY10_78655	1	1	23	40	uv|J01783.1:4575-7894-49	375	358	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	724	1		5.089820359
VdnRY3_52755	1	1	303	320	uv|KY031727.1:11896-11979-16	2	19	Weak	Weak	Suspect[321,334];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 10	5.089820359
SdnRY1_63170	1	1	313	329	uv|EU360889.1:4417-6776-46	2093	2109	Weak	Weak	Suspect[330,334];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 6	4.790419162
VdnRY2_87463	1	1	308	324	uv|AY753578.1:1-838	134	150	Weak	Weak	Suspect[325,334];	TRUE_BIOLOGICAL	6181	1	Solanum tuberosum chromosome 11 clone RH186L12, complete sequence	4.790419162
VdnRY4_56443	1	1	318	334	uv|NGB00413.1:1-3960	276	260	Weak	Weak	None	TRUE_BIOLOGICAL	12103	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604173 (LOC102604173), transcript variant X2, mRNA	4.790419162
CLCdnRY10_65042	1	1	13	28	uv|V00604.2:1-6407-49	5264	5249	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum gamma aminobutyrate transaminase 1, mitochondrial (LOC102599962), transcript variant X2, mRNA	4.491017964
CLCdnRY1_40069	1	1	305	320	uv|KF719005.1:2205-5132	604	619	Weak	Weak	Suspect[321,334];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum ATP-dependent RNA helicase DHX36 (LOC102592008), mRNA	4.491017964
CLCdnRY4_68231	1	1	13	28	uv|JF909482.1:3850-8059	3404	3419	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	3701	1		4.491017964
CLCdnRY7_4446	1	1	22	37	uv|U89960.1:4738-7717	879	894	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum 12-oxophytodienoate reductase 1-like (LOC102579964), mRNA	4.491017964
VdnRY2_109545	1	1	11	26	uv|NGB00051.1:1428-2848	1308	1293	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	Solanum pennellii chromosome ch05, complete genome	4.491017964
VdnRY6_19800	1	1	14	29	uv|EF216317.1:1966-2681	555	570	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum V-type proton ATPase subunit E-like (LOC102600657), mRNA	4.491017964
CLCdnRY5_43272	1	1	22	39	uv|DQ391279.1:1-10285	959	942	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum homeobox-leucine zipper protein HAT4 (LOC102597132), mRNA	5.105105105
VdnRY1_132204	1	1	305	321	uv|AF327713.1:4881-4979	78	94	Weak	Weak	Suspect[322,333];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580131 (LOC102580131), mRNA	4.804804805
CLCdnRY10_57866	1	1	306	321	uv|LC121524.1:5721-6815	840	855	Weak	Weak	Suspect[322,333];	NO_DATA	1	1	PREDICTED: Solanum tuberosum mitogen-activated protein kinase kinase kinase YODA (LOC102594961), transcript variant X3, mRNA	4.504504505
CLCdnRY8_31215	1	1	300	315	uv|KY031724.1:1-5301	3780	3765	Weak	Weak	Suspect[316,333];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum putative disease resistance protein At3g14460 (LOC107063531), mRNA	4.504504505
VdnRY3_78004	1	1	300	315	uv|U13843.1:1887-9923	6414	6429	Weak	Weak	Suspect[316,333];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 22 (LOC102603759), mRNA	4.504504505
VdnRY2_70970	1	1	305	326	uv|M77169.1:820-5161	2511	2489	Weak	Weak	Suspect[327,332];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum cytochrome P450 83B1-like (LOC102593183), transcript variant X1, mRNA	6.325301205
CLCdnRY3_46873	1	1	303	318	uv|AF379854.1:3-2710	1368	1383	Weak	Weak	Suspect[319,332];	TRUE_BIOLOGICAL	5820	1	Solanum demissum chromosome 5 clone PGEC132D05, complete sequence	4.518072289
SdnRY1_63440	1	1	22	37	uv|AF379854.1:4263-5841	278	293	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum auxin-responsive protein IAA3-like (LOC102587488), mRNA	4.518072289
CLCdnRY10_58853	1	1	18	33	uv|V00604.2:1-6407-49	4822	4837	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum (3S,6E)-nerolidol synthase 1-like (LOC102580873), mRNA	4.518072289
CLCdnRY4_57866	1	1	18	33	uv|V00604.2:1-6407-49	4822	4837	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum (3S,6E)-nerolidol synthase 1-like (LOC102580873), mRNA	4.518072289
CLCdnRY6_82966	1	1	294	309	uv|L00595.1:1-393	116	101	Weak	Weak	Suspect[310,332];	TRUE_BIOLOGICAL	620	1	Xanthophyllomyces dendrorhous genome assembly Xden1, scaffold Scaffold_193	4.518072289
CLCdnRY9_48262	1	1	303	318	uv|AF379854.1:3-2710	1368	1383	Weak	Weak	Suspect[319,332];	TRUE_BIOLOGICAL	5820	1	Solanum demissum chromosome 5 clone PGEC132D05, complete sequence	4.518072289
SdnRY1_63531	1	1	4	19	uv|KF719005.1:2205-5132	914	929	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch02, complete genome	4.518072289
CLCdnRY3_51727	1	1	19	35	uv|JQ927446.1:4885-6835-49	1079	1095	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 00	4.833836858
VdnRY6_28365	1	1	9	25	uv|KM407506.1:2354-4632	417	401	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum pennellii aspartic proteinase-like protein 1 (LOC107016004), mRNA	4.833836858
CLCdnRY1_24883	1	1	300	315	uv|KC702190.1:1-1136	872	887	Weak	Weak	Suspect[316,331];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum uncharacterized LOC102601487 (LOC102601487), mRNA	4.531722054
SdnRY1_63681	1	1	310	325	uv|DQ917670.1:4-137	79	64	Weak	Weak	Suspect[326,331];	NO_DATA	1	1	PREDICTED: Capsicum annuum mitochondrial inner membrane protease subunit 2-like (LOC107862168), transcript variant X3, mRNA	4.531722054
CLCdnRY4_2248	1	1	8	23	uv|KF718979.1:2206-6730	2732	2747	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	3701	1	Solanum tuberosum UDP-glucose flavonoid 3-O-glucosyltransferase 7-like (LOC102592699), mRNA<>Solanum tuberosum UDP-glucose:solanidine glucosyltransferase (sgt2) mRNA, sgt2-2 allele, complete cds	4.531722054
CLCdnRY6_61585	1	1	11	26	uv|M34298.1:3143-4604	855	870	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	6237	1	Solanum lycopersicum cultivar I-3 chromosome 4	4.531722054
CLCdnRY7_13143	1	1	308	323	uv|V00604.2:1-6407-49	3171	3156	Weak	Weak	Suspect[324,331];	TRUE_BIOLOGICAL	10861	1	Solanum lycopersicum cultivar I-3 chromosome 7	4.531722054
CLCdnRY8_4430	1	1	18	33	uv|U89960.1:4738-7717	879	894	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum 12-oxophytodienoate reductase 1-like (LOC102579964), mRNA	4.531722054
SdnRY1_63730	1	1	293	308	uv|M15130.1:255-406	34	19	Weak	Weak	Suspect[309,331];	TRUE_BIOLOGICAL	620	1	Solanum pennellii chromosome ch07, complete genome	4.531722054
VdnRY2_13718	1	1	308	323	uv|LC121524.1:5721-6815	296	311	Weak	Weak	Suspect[324,331];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107058470 (LOC107058470), mRNA	4.531722054
VdnRY2_27904	1	1	17	32	uv|U55760.1:1-2749	2329	2314	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	558016	1	Solanum lycopersicum cultivar I-3 chromosome 4	4.531722054
SdnRY1_63781	1	1	294	320	uv|NGB00276.1:1-56	56	30	Moderate	Moderate	Suspect[321,330];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum uncharacterized LOC107062625 (LOC107062625), mRNA	7.878787879
CLCdnRY12_80763	1	1	12	29	uv|NGB00587.1:1-3232	3121	3104	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable purine permease 9 (LOC102579559), mRNA	5.151515152
CLCdnRY2_18942	1	1	299	315	uv|U09365.1:787-1365	310	294	Weak	Weak	Suspect[316,330];	NO_DATA	1	1	PREDICTED: Solanum tuberosum high mobility group B protein 1 (LOC102581733), transcript variant X2, mRNA	4.848484848
VdnRY2_65072	1	1	297	313	uv|AY093584.1:3788-6062	2159	2143	Weak	Weak	Suspect[314,330];	TRUE_BIOLOGICAL	5052	1	Solanum pennellii chromosome ch04, complete genome	4.848484848
CLCdnRY4_20823	1	1	23	39	uv|AF379854.1:4263-5841	888	904	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum F-box protein PP2-A13-like (LOC102581488), mRNA	4.848484848
VdnRY2_91207	1	1	298	314	uv|U02436.1:1330-2607	447	463	Weak	Weak	Suspect[315,330];	TRUE_BIOLOGICAL	4930	1	Paracoccus yeei strain CCUG 32053 chromosome, complete genome	4.848484848
VdnRY7_21010	1	1	25	41	uv|J02459.1:1-48502-49	43904	43920	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581072 (LOC102581072), mRNA	4.848484848
CLCdnRY2_7857	1	1	19	34	uv|V00604.2:1-6407-49	4714	4729	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum AP-1 complex subunit mu-2 (LOC102589986), mRNA	4.545454545
CLCdnRY9_58675	1	1	24	39	uv|U03498.1:7366-8059	549	534	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch06, complete genome	4.545454545
CLCdnRY10_37105	1	1	8	23	uv|U89961.1:1-4240	3912	3927	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum PHD finger protein At1g33420 (LOC102593406), mRNA	4.545454545
CLCdnRY11_67865	1	1	25	40	uv|U67875.1:8796-9922	500	485	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588996 (LOC102588996), transcript variant X1, misc_RNA	4.545454545
SdnRY1_63931	1	1	24	39	uv|U03498.1:7366-8059	549	534	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch06, complete genome	4.545454545
VdnRY1_11173	1	1	23	38	uv|U09128.1:3334-10218	709	724	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	91347	1	Nicotiana tabacum sucrose-phosphate synthase isoform B (SPSB) mRNA, complete cds	4.545454545
VdnRY2_1103	1	1	299	314	uv|KF718996.1:2914-4532	679	694	Weak	Weak	Suspect[315,330];	NO_DATA	1	1	PREDICTED: Solanum tuberosum oxygen-evolving enhancer protein 1, chloroplastic (LOC102577458), mRNA	4.545454545
SdnRY1_64072	1	1	307	325	uv|M34298.1:3143-4604	1119	1101	Moderate	Moderate	Suspect[326,329];	TRUE_BIOLOGICAL	6237	1	Solanum lycopersicum cultivar I-3 chromosome 5	5.47112462
CLCdnRY1_31729	1	1	296	313	uv|J01783.1:4575-7894-49	1376	1393	Weak	Weak	Suspect[314,329];	TRUE_BIOLOGICAL	724	1	PREDICTED: Solanum tuberosum histone H3.3 (LOC102586673), mRNA	5.167173252
SdnRY1_64072	1	1	305	321	uv|M34298.1:3143-4604	239	255	Weak	Moderate	Suspect[326,329];	TRUE_BIOLOGICAL	6237	1	Solanum lycopersicum cultivar I-3 chromosome 5	4.863221884
CLCdnRY10_30831	1	1	18	33	uv|J02400.1:1-5243-49	2892	2877	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At4g13650 (LOC102598486), transcript variant X1, mRNA	4.559270517
CLCdnRY10_51709	1	1	10	25	uv|AF379854.1:4263-5841	345	330	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	5820	1		4.559270517
CLCdnRY8_13254	1	1	2	17	uv|GU593054.1:6136-8806	1179	1194	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	PREDICTED: Solanum tuberosum glucan endo-1,3-beta-glucosidase A-like (LOC102579100), mRNA	4.559270517
SdnRY1_64030	1	1	8	23	uv|JX560397.1:83-5970	5395	5380	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	29487	1	Solanum demissum R8 gene cluster, partial sequence	4.559270517
SdnRY1_64061	1	1	2	17	uv|JX992842.1:806-1052	114	99	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	3701	1		4.559270517
SdnRY1_64069	1	1	297	312	uv|X53127.1:443-904	184	199	Weak	Weak	Suspect[313,329];	TRUE_BIOLOGICAL	6237	1		4.559270517
CLCdnRY6_18195	1	1	16	31	uv|KC702179.1:1-1019	520	505	Weak	Weak	Suspect[1,15];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum histidine decarboxylase-like (LOC102582616), mRNA	4.559270517
VdnRY6_7296	1	1	305	320	uv|U73899.1:1933-2031	66	81	Weak	Weak	Suspect[321,329];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable receptor-like protein kinase At2g42960 (LOC102582748), transcript variant X6, misc_RNA	4.559270517
VdnRY7_9851	1	1	11	26	uv|JN204905.1:1-455	249	234	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum pennellii aminomethyltransferase, mitochondrial (LOC107011011), transcript variant X1, mRNA	4.559270517
CLCdnRY11_2981	1	1	277	328	uv|KF719004.1:2204-2946	113	62	Strong	Strong	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2c gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	15.54878049
VdnRY1_3487	1	1	4	21	uv|HM640258.1:3527-5744	149	132	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum tuberosum protein RER1B-like (LOC102601257), mRNA	5.182926829
VdnRY1_123862	1	1	290	305	uv|J02459.1:1-48502-49	22815	22830	Weak	Weak	Suspect[306,328];	TRUE_BIOLOGICAL	10699	1		4.573170732
CLCdnRY2_23308	1	1	295	310	uv|DQ883650.3:1-642	587	602	Weak	Weak	Suspect[311,328];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600663 (LOC102600663), mRNA	4.573170732
CLCdnRY3_54018	1	1	14	29	uv|AF379854.1:3-2710	2004	2019	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060975 (LOC107060975), mRNA	4.573170732
CLCdnRY8_2345	1	1	8	23	uv|JX560326.2:346-1260	148	163	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum pennellii phospholipase A1-II 1-like (LOC107009434), mRNA	4.573170732
SdnRY1_64237	1	1	14	29	uv|Z50121.2:19-1510	175	160	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	620	1	Solanum pennellii chromosome ch11, complete genome	4.573170732
VdnRY2_55536	1	1	302	317	uv|KC702224.1:1-1022	653	638	Weak	Weak	Suspect[318,328];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum zinc finger protein ZAT5 (LOC102605970), mRNA	4.573170732
VdnRY4_49460	1	1	302	317	uv|KC702194.1:1-1023	755	740	Weak	Weak	Suspect[318,328];	TRUE_BIOLOGICAL	196118	1	Solanum tuberosum zeaxanthin epoxidase (ZEP) gene, ZEP-1 allele, complete cds; and LINE-1-like retrotransposon, complete sequence	4.573170732
VdnRY4_47323	1	1	245	271	uv|JX069762.1:9774-9902-49	113	87	Moderate	Moderate	None	TRUE_ARTIFICIAL	81077	81077	Solanum tuberosum mRNA for extensin-like protein, partial	7.951070336
VdnRY2_15749	1	1	295	311	uv|AF310136.1:4127-5198	1037	1021	Weak	Weak	Suspect[316,327];	TRUE_BIOLOGICAL	620	1	Solanum pennellii chromosome ch04, complete genome	4.892966361
CLCdnRY10_48675	1	1	8	24	uv|KC702212.1:1-1136	580	596	Weak	Weak	Suspect[1,7];	TRUE_ARTIFICIAL	81077	81077	Solanum lycopersicum cultivar I-3 chromosome 1	4.892966361
CLCdnRY4_72420	1	1	298	314	uv|KF719005.1:2205-5132	1795	1811	Weak	Weak	Suspect[315,327];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604388 (LOC102604388), transcript variant X3, ncRNA	4.892966361
VdnRY2_91206	1	1	295	311	uv|U02436.1:1330-2607	447	463	Weak	Weak	Suspect[312,327];	TRUE_BIOLOGICAL	4930	1	Paracoccus yeei strain CCUG 32053 chromosome, complete genome	4.892966361
CLCdnRY1_58043	1	1	290	305	uv|AY568055.1:9139-10024	108	123	Weak	Weak	Suspect[306,327];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	4.587155963
VdnRY1_31345	1	1	304	319	uv|AB215109.1:4349-4398-49	62	77	Weak	Weak	Suspect[320,327];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 8	4.587155963
VdnRY2_15749	1	1	300	315	uv|AF379854.1:4263-5841	1188	1173	Weak	Weak	Suspect[316,327];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	4.587155963
VdnRY2_35917	1	1	305	320	uv|KC702192.1:1-523	263	278	Weak	Weak	Suspect[321,327];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum protein STAY-GREEN, chloroplastic-like (LOC102597935), transcript variant X1, mRNA	4.587155963
CLCdnRY4_19904	1	1	299	314	uv|LC029925.1:8436-8631	145	160	Weak	Weak	Suspect[315,327];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ribosome biogenesis protein BOP1 homolog (LOC102596556), mRNA	4.587155963
VdnRY6_23003	1	1	289	304	uv|M97937.1:846-1007	62	77	Weak	Weak	Suspect[305,327];	NO_DATA	1	1	PREDICTED: Solanum tuberosum glycine-rich cell wall structural protein 2 (LOC102590732), mRNA	4.587155963
VdnRY2_57437	1	1	295	311	uv|KM407512.1:886-4985	1696	1680	Weak	Weak	Suspect[312,326];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (LOC107059933), mRNA	4.90797546
CLCdnRY7_6420	1	1	18	33	uv|NGB00030.1:2980-3913	837	852	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum protein CDC73 homolog (LOC102581317), mRNA	4.601226994
CLCdnRY8_9615	1	1	6	21	uv|KC702206.1:1-523	94	79	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum gamma-glutamyltranspeptidase 1-like (LOC102597338), mRNA	4.601226994
CLCdnRY6_12438	1	1	9	27	uv|L00595.1:1-393	341	359	Moderate	Moderate	Suspect[1,4];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588972 (LOC102588972), mRNA	5.538461538
VdnRY1_104851	1	1	297	314	uv|U13843.1:1887-9923	2034	2017	Weak	Weak	Suspect[315,325];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 60 (LOC102589830), transcript variant X2, mRNA	5.230769231
VdnRY5_30545	1	1	292	308	uv|U67875.1:6835-8216	552	536	Weak	Weak	Suspect[309,325];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum uncharacterized membrane protein At1g06890-like (LOC102583124), mRNA	4.923076923
VdnRY1_31919	1	1	309	325	uv|U02436.1:3152-4436	1144	1160	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 2	4.923076923
VdnRY2_38140	1	1	2	18	uv|X06779.1:1-4734	747	763	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum pennellii probable methyltransferase PMT13 (LOC107007951), mRNA	4.923076923
VdnRY2_57438	1	1	294	310	uv|KM407512.1:886-4985	1696	1680	Weak	Weak	Suspect[311,325];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (LOC107059933), mRNA	4.923076923
CLCdnRY6_12438	1	1	5	20	uv|KC702209.1:1-2022	313	298	Weak	Moderate	Suspect[1,4];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588972 (LOC102588972), mRNA	4.615384615
CLCdnRY1_29881	1	1	290	305	uv|FJ160466.1:1899-7260-49	3081	3066	Weak	Weak	Suspect[306,325];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598715 (LOC102598715), transcript variant X14, misc_RNA	4.615384615
CLCdnRY10_80599	1	1	305	320	uv|JN581374.1:616-2149	307	292	Weak	Weak	Suspect[321,325];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum uncharacterized LOC109120547 (LOC109120547), ncRNA	4.615384615
CLCdnRY11_3217	1	1	13	28	uv|U02450.1:497-595	99	84	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	558016	1	Solanum tuberosum 8-hydroxygeraniol dehydrogenase-like (LOC102589753), mRNA<>Solanum tuberosum mRNA for alcohol NADP+ oxidoreductase (drd-1 gene)	4.615384615
CLCdnRY11_61568	1	1	310	325	uv|AF327895.1:644-842	97	82	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable copper-transporting ATPase HMA5 (LOC102583551), mRNA	4.615384615
CLCdnRY12_14652	1	1	21	36	uv|U89929.1:723-1593	265	250	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum 60S ribosomal protein L32-1-like (LOC102603686), mRNA	4.615384615
CLCdnRY3_2416	1	1	300	315	uv|JX560326.2:346-1260	163	148	Weak	Weak	Suspect[316,325];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum phospholipase A1-II 1 (LOC101247389), transcript variant X2, mRNA	4.615384615
CLCdnRY5_3149	1	1	13	28	uv|U02450.1:497-595	99	84	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum lycopersicum 8-hydroxygeraniol dehydrogenase (LOC543602), transcript variant X1, mRNA	4.615384615
CLCdnRY8_48445	1	1	14	29	uv|JN874480.1:11708-20103	1827	1812	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	357	1	Solanum lycopersicum cultivar I-3 chromosome 4	4.615384615
VdnRY2_204580	1	1	3	18	uv|DQ666274.1:249-3225	269	284	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597903 (LOC102597903), mRNA	4.615384615
VdnRY6_24825	1	1	286	304	uv|J02400.1:1-5243-49	884	902	Moderate	Moderate	Suspect[305,324];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum serine/arginine-rich splicing factor 2-like (LOC102597653), transcript variant X3, mRNA	5.555555556
VdnRY1_32242	1	1	287	304	uv|V00604.2:1-6407-49	5008	5025	Weak	Weak	Suspect[1,18];Suspect[305,324];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum lycopersicum 2-oxoglutarate-Fe(II) type oxidoreductase hxnY (LOC101264216), transcript variant X6, mRNA	5.24691358
VdnRY2_60985	1	1	285	302	uv|AY568055.1:6692-7837	739	722	Weak	Weak	Suspect[303,324];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589560 (LOC102589560), transcript variant X2, mRNA	5.24691358
SdnRY1_64955	1	1	303	319	uv|M64753.1:1943-3400	1276	1292	Weak	Weak	Suspect[320,324];	TRUE_BIOLOGICAL	590	1	Solanum demissum isolate 568A14a disease resistance protein R3a-like protein gene, partial cds	4.938271605
CLCdnRY11_63892	1	1	303	318	uv|Z32692.1:1-221	71	56	Weak	Weak	Suspect[319,324];	TRUE_BIOLOGICAL	10242	1	PREDICTED: Solanum tuberosum zinc finger protein 3-like (LOC102605040), mRNA	4.62962963
CLCdnRY11_86477	1	1	305	320	uv|JN581374.1:616-2149	307	292	Weak	Weak	Suspect[321,324];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum uncharacterized LOC109120547 (LOC109120547), ncRNA	4.62962963
CLCdnRY1_5085	1	1	308	323	uv|JN874481.1:57-2095	233	248	Weak	Weak	Suspect[324,324];	TRUE_BIOLOGICAL	3705	1	PREDICTED: Solanum tuberosum protein TIC 20-I, chloroplastic-like (LOC102601586), mRNA	4.62962963
CLCdnRY7_52962	1	1	2	17	uv|NGB00143.1:3812-3899-43	28	13	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	Solanum pennellii chromosome ch07, complete genome	4.62962963
VdnRY1_32242	1	1	19	34	uv|J01783.1:4575-7894-49	640	625	Weak	Weak	Suspect[1,18];Suspect[305,324];	TRUE_BIOLOGICAL	724	1	PREDICTED: Solanum lycopersicum 2-oxoglutarate-Fe(II) type oxidoreductase hxnY (LOC101264216), transcript variant X6, mRNA	4.62962963
CLCdnRY10_29872	1	1	306	322	uv|M34305.1:3197-4538	1278	1294	Weak	Weak	Suspect[323,323];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum pollen-specific leucine-rich repeat extensin-like protein 1 (LOC107060823), mRNA	4.953560372
CLCdnRY12_22607	1	1	7	23	uv|KC702208.1:1-1350	1203	1219	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580459 (LOC102580459), mRNA	4.953560372
CLCdnRY12_79762	1	1	1	17	uv|FJ710109.1:6726-9221	2084	2068	Weak	Weak	None	TRUE_BIOLOGICAL	10375	1	PREDICTED: Solanum lycopersicum ubiquitin receptor RAD23c (LOC101258124), transcript variant X3, mRNA	4.953560372
CLCdnRY6_14352	1	1	7	23	uv|KC702208.1:1-1350	1203	1219	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580459 (LOC102580459), mRNA	4.953560372
SdnRY1_65023	1	1	6	22	uv|AB215109.1:1703-1800	74	58	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cytochrome P450 71A4-like (LOC102583405), mRNA	4.953560372
CLCdnRY1_57178	1	1	17	32	uv|KP057689.1:1-859	354	339	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	84111	1	PREDICTED: Solanum tuberosum glutamic acid-rich protein-like (LOC102598091), mRNA	4.643962848
VdnRY1_59846	1	1	7	22	uv|KF719005.1:2205-5132	1522	1507	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum chaperone protein dnaJ 8, chloroplastic (LOC102587221), mRNA	4.643962848
VdnRY2_156962	1	1	308	323	uv|U57606.1:1286-1372	68	83	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587874 (LOC102587874), mRNA	4.643962848
CLCdnRY10_81752	1	1	15	31	uv|DQ666274.1:249-3225	2733	2749	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	1386	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.968944099
CLCdnRY11_51342	1	1	1	17	uv|AY301066.1:1-1261	1210	1226	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum cycloeucalenol cycloisomerase (LOC102603067), transcript variant X1, mRNA	4.968944099
CLCdnRY7_55804	1	1	284	300	uv|GU593055.1:13024-13902-49	817	833	Weak	Weak	Suspect[301,322];	TRUE_BIOLOGICAL	2093	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.968944099
SdnRY1_65321	1	1	11	26	uv|DQ883685.3:1-994	640	625	Weak	Weak	Suspect[1,10];	NO_DATA	1	1		4.658385093
VdnRY4_21751	1	1	8	23	uv|KF718974.2:698-2126	297	282	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum plasma membrane-associated cation-binding protein 1 (LOC102600937), mRNA	4.658385093
CLCdnRY11_55588	1	1	296	311	uv|U55760.1:1-2749	1862	1847	Weak	Weak	Suspect[312,322];	TRUE_BIOLOGICAL	558016	1	Solanum pennellii chromosome ch02, complete genome	4.658385093
CLCdnRY12_87069	1	1	287	304	uv|HQ245711.1:13692-16404	570	553	Weak	Weak	Suspect[305,321];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized protein At1g04910-like (LOC102580576), transcript variant X3, mRNA	5.295950156
SdnRY1_65538	1	1	301	317	uv|U67875.1:6835-8216	422	438	Weak	Weak	Suspect[318,321];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum uncharacterized LOC102595314 (LOC102595314), mRNA	4.984423676
CLCdnRY12_82534	1	1	2	18	uv|U55760.1:1-2749	2292	2276	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum nodulation-signaling pathway 2 protein (LOC102585836), mRNA	4.984423676
VdnRY1_74286	1	1	11	27	uv|AF310136.1:4127-5198	274	290	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum F-box protein At4g22280-like (LOC102578197), mRNA	4.984423676
CLCdnRY2_20449	1	1	11	26	uv|KC702192.1:1-523	184	169	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585584 (LOC102585584), ncRNA	4.672897196
CLCdnRY3_61556	1	1	291	306	uv|J02459.1:1-48502-49	10589	10574	Weak	Weak	Suspect[307,321];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum putative inactive disease susceptibility protein LOV1 (LOC102605823), transcript variant X4, mRNA	4.672897196
CLCdnRY8_41945	1	1	282	297	uv|M36415.1:190-390	186	201	Weak	Weak	Suspect[298,321];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch06, complete genome	4.672897196
VdnRY7_7218	1	1	296	311	uv|NGB01065.1:1-66	44	29	Weak	Weak	Suspect[312,321];	NO_DATA	1	1	PREDICTED: Solanum tuberosum vesicle-associated membrane protein 714 (LOC102600875), mRNA	4.672897196
VdnRY1_47442	1	1	13	30	uv|L08862.1:1-2039	1373	1390	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C (LOC102602237), transcript variant X2, mRNA	5.3125
VdnRY1_32244	1	1	283	300	uv|V00604.2:1-6407-49	5008	5025	Weak	Weak	Suspect[1,18];Suspect[301,320];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum lycopersicum 2-oxoglutarate-Fe(II) type oxidoreductase hxnY (LOC101264216), transcript variant X6, mRNA	5.3125
CLCdnRY1_45298	1	1	1	17	uv|L08860.1:1-1129	522	538	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102603587 (LOC102603587), mRNA	5
CLCdnRY10_66196	1	1	21	37	uv|J02482.1:1-5386-49	3452	3436	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588456 (LOC102588456), mRNA	5
CLCdnRY1_38466	1	1	8	23	uv|U02452.1:4310-5466	224	239	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum periodic tryptophan protein 2 homolog (LOC102587545), transcript variant X3, mRNA	4.6875
CLCdnRY3_16208	1	1	18	33	uv|AF379854.1:4263-5841	217	202	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum lycopersicum probable serine/threonine-protein kinase DDB_G0291350 (LOC101265629), mRNA	4.6875
CLCdnRY9_7170	1	1	304	319	uv|KC702206.1:1-523	364	349	Weak	Weak	Suspect[320,320];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.6875
CLCdnRY12_62091	1	1	19	34	uv|J02459.1:1-48502-49	33273	33258	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum NAC domain-containing protein 82-like (LOC102602510), transcript variant X3, mRNA	4.6875
CLCdnRY1_44479	1	1	303	318	uv|AY597273.1:5736-5918	1	16	Weak	Weak	Suspect[319,320];	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum uncharacterized LOC102595875 (LOC102595875), mRNA	4.6875
CLCdnRY2_62541	1	1	285	300	uv|DQ666274.1:249-3225	1588	1603	Weak	Weak	Suspect[301,320];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum zinc finger protein ZAT1-like (LOC102601011), mRNA	4.6875
CLCdnRY3_66748	1	1	10	25	uv|U13843.1:1887-9923	415	400	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	325454	1	Solanum lycopersicum cultivar I-3 chromosome 11	4.6875
VdnRY1_32244	1	1	19	34	uv|J01783.1:4575-7894-49	640	625	Weak	Weak	Suspect[1,18];Suspect[301,320];	TRUE_BIOLOGICAL	724	1	PREDICTED: Solanum lycopersicum 2-oxoglutarate-Fe(II) type oxidoreductase hxnY (LOC101264216), transcript variant X6, mRNA	4.6875
VdnRY3_9604	1	1	297	312	uv|J02459.1:1-48502-49	36894	36879	Weak	Weak	Suspect[313,320];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578255 (LOC102578255), transcript variant X2, mRNA	4.6875
VdnRY6_29424	1	1	9	24	uv|L24367.1:218-930	416	431	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	1707	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602178 (LOC102602178), transcript variant X1, mRNA	4.6875
CLCdnRY11_335	1	1	10	26	uv|AF379854.1:4263-5841	681	665	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	5820	1	Solanum lycopersicum cultivar I-3 chromosome 4	5.015673981
CLCdnRY10_34431	1	1	284	299	uv|KF719017.1:2210-3106	812	797	Weak	Weak	Suspect[300,319];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584693 (LOC102584693), transcript variant X5, mRNA	4.702194357
SdnRY1_65752	1	1	298	313	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[314,319];	TRUE_BIOLOGICAL	10699	1	Solanum lycopersicum cultivar I-3 chromosome 2	4.702194357
VdnRY1_149822	1	1	290	305	uv|X13003.1:2753-4028	638	623	Weak	Weak	Suspect[306,319];	TRUE_BIOLOGICAL	561	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592015 (LOC102592015), mRNA	4.702194357
VdnRY7_7503	1	1	302	317	uv|DQ883685.3:1-994	867	852	Weak	Weak	Suspect[318,319];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107057797 (LOC107057797), ncRNA	4.702194357
CLCdnRY4_48227	1	1	1	18	uv|J02400.1:1-5243-49	2905	2922	Weak	Weak	None	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum homeobox-leucine zipper protein ATHB-6-like (LOC102592561), mRNA	5.34591195
CLCdnRY4_48227	1	1	6	22	uv|AF234306.1:151-267	48	32	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum homeobox-leucine zipper protein ATHB-6-like (LOC102592561), mRNA	5.031446541
SdnRY1_65997	1	1	7	23	uv|AY529716.1:2777-2880	55	71	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060251 (LOC107060251), mRNA	5.031446541
VdnRY3_74545	1	1	280	295	uv|JQ927446.1:4885-6835-49	418	403	Weak	Weak	Suspect[296,318];	NO_DATA	1	1	PREDICTED: Solanum tuberosum U-box domain-containing protein 33-like (LOC102589890), mRNA	4.716981132
VdnRY4_38323	1	1	303	318	uv|EF437940.1:7199-10690-48	553	568	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At3g16010 (LOC102601708), transcript variant X3, misc_RNA	4.716981132
CLCdnRY10_86000	1	1	8	23	uv|AF379854.1:4263-5841	374	359	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	5820	1	Solanum lycopersicum cultivar I-3 chromosome 8	4.716981132
CLCdnRY12_37393	1	1	17	32	uv|JF909481.1:3855-5640	1103	1088	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	Solanum pennellii chromosome ch03, complete genome	4.716981132
CLCdnRY2_47197	1	1	288	303	uv|FJ750577.1:368-2560	1963	1948	Weak	Weak	Suspect[304,318];	TRUE_BIOLOGICAL	4447	1	Solanum pennellii chromosome ch06, complete genome	4.716981132
CLCdnRY7_15999	1	1	12	27	uv|NGB00030.1:2980-3913	814	799	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum pennellii anthocyanidin 3-O-glucosyltransferase 5-like (LOC107015623), mRNA	4.716981132
CLCdnRY8_23537	1	1	287	302	uv|U13849.1:637-735	58	43	Weak	Weak	Suspect[303,318];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable cinnamyl alcohol dehydrogenase 1 (LOC102602480), mRNA	4.716981132
CLCdnRY6_32280	1	1	279	299	uv|U14124.1:1-466	152	172	Moderate	Moderate	Suspect[300,317];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum 65-kDa microtubule-associated protein 6 (LOC102598747), mRNA	6.309148265
VdnRY1_9693	1	1	18	34	uv|GU339044.1:3206-3282	3	19	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum transcription factor bHLH128-like (LOC102602254), transcript variant X2, mRNA	5.047318612
CLCdnRY1_18729	1	1	270	286	uv|AF327712.1:1582-7289	4233	4217	None	Weak	Suspect[295,317];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum NEDD8-conjugating enzyme Ubc12-like (LOC102598117), transcript variant X2, mRNA	5.047318612
SdnRY1_66169	1	1	281	296	uv|KC702182.1:1-1023	566	581	Weak	Weak	Suspect[297,317];	TRUE_BIOLOGICAL	196118	1		4.731861199
SdnRY1_66185	1	1	299	314	uv|M77169.1:820-5161	2055	2040	Weak	Weak	Suspect[315,317];	TRUE_BIOLOGICAL	1485	1		4.731861199
CLCdnRY10_78447	1	1	284	299	uv|U30497.1:3230-4814	615	600	Weak	Weak	Suspect[300,317];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 9	4.731861199
CLCdnRY12_57311	1	1	296	311	uv|KC702234.1:1-1022	566	551	Weak	Weak	Suspect[312,317];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii uncharacterized protein YtfP (LOC107009078), mRNA	4.731861199
CLCdnRY12_72940	1	1	7	22	uv|KC702234.1:1-1022	551	566	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii uncharacterized protein YtfP (LOC107009078), mRNA	4.731861199
CLCdnRY1_18729	1	1	279	294	uv|KF718989.1:2199-3181	76	91	Weak	Weak	Suspect[295,317];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum NEDD8-conjugating enzyme Ubc12-like (LOC102598117), transcript variant X2, mRNA	4.731861199
CLCdnRY6_58341	1	1	296	311	uv|KC702234.1:1-1022	566	551	Weak	Weak	Suspect[312,317];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii uncharacterized protein YtfP (LOC107009078), mRNA	4.731861199
SdnRY1_66114	1	1	286	301	uv|EF437940.1:7199-10690-48	2651	2666	Weak	Weak	Suspect[302,317];	NO_DATA	1	1	PREDICTED: Solanum tuberosum MORC family CW-type zinc finger protein 3 (LOC102590094), transcript variant X2, mRNA	4.731861199
SdnRY1_66128	1	1	300	315	uv|V00604.2:1-6407-49	4837	4822	Weak	Weak	Suspect[316,317];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum (3S,6E)-nerolidol synthase 1-like (LOC102580873), mRNA	4.731861199
VdnRY4_54525	1	1	292	307	uv|U29899.1:4697-5948	56	41	Weak	Weak	Suspect[308,317];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At1g07650 (LOC102589478), transcript variant X1, mRNA	4.731861199
CLCdnRY11_85146	1	1	277	294	uv|U13843.1:1-1126	1039	1056	Weak	Weak	Suspect[295,316];	TRUE_BIOLOGICAL	9989	1	PREDICTED: Solanum lycopersicum transcription factor VIP1 (LOC101263700), mRNA	5.379746835
CLCdnRY1_23492	1	1	301	316	uv|U47294.2:1-1774	128	143	Weak	Weak	None	TRUE_BIOLOGICAL	10508	1	PREDICTED: Solanum pennellii calcium-transporting ATPase, endoplasmic reticulum-type (LOC107003975), transcript variant X8, mRNA	4.746835443
CLCdnRY9_30021	1	1	293	308	uv|DQ391279.1:1-10285	456	471	Weak	Weak	Suspect[309,316];	TRUE_BIOLOGICAL	308911	1		4.746835443
CLCdnRY10_24218	1	1	282	297	uv|KC702231.1:1-1021	963	948	Weak	Weak	Suspect[298,316];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum F-box/LRR-repeat protein 12 (LOC102587561), transcript variant X2, mRNA	4.746835443
CLCdnRY8_19130	1	1	287	302	uv|JF909478.1:3849-4965	797	782	Weak	Weak	Suspect[303,316];	TRUE_BIOLOGICAL	10639	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586900 (LOC102586900), transcript variant X1, mRNA	4.746835443
VdnRY1_9175	1	1	273	291	uv|DQ391279.1:13402-14600	789	771	Moderate	Moderate	Suspect[292,315];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein TIFY 10A-like (LOC102592910), mRNA	5.714285714
CLCdnRY1_60441	1	1	17	34	uv|AY217101.1:3918-4201	215	198	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum formin-like protein 13 (LOC102594339), transcript variant X3, mRNA	5.396825397
VdnRY1_103846	1	1	276	292	uv|FJ750577.1:368-2560	1536	1520	Weak	Weak	Suspect[293,315];	TRUE_BIOLOGICAL	4447	1	Solanum pennellii chromosome ch08, complete genome	5.079365079
CLCdnRY1_60441	1	1	16	31	uv|Z29589.1:3211-4486	896	881	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	4527	1	PREDICTED: Solanum tuberosum formin-like protein 13 (LOC102594339), transcript variant X3, mRNA	4.761904762
SdnRY1_66616	1	1	9	24	uv|AF379854.1:3-2710	1299	1284	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	5820	1	Solanum tuberosum chromosome 11 clone RH067L08, complete sequence	4.761904762
CLCdnRY10_84772	1	1	13	28	uv|JQ394800.1:3949-4050	77	92	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	4.761904762
CLCdnRY2_26789	1	1	19	34	uv|KC702228.1:1-1023	580	565	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.761904762
VdnRY3_30763	1	1	24	39	uv|JN874480.1:1050-2714	513	498	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum hypoxanthine-guanine phosphoribosyltransferase (LOC102579358), mRNA	4.761904762
VdnRY4_38815	1	1	283	298	uv|JN581377.1:1749-2242	31	16	Weak	Weak	Suspect[299,315];	TRUE_BIOLOGICAL	4930	1	Solanum tuberosum S-adenosylmethionine synthase 2 (LOC102578902), mRNA<>Solanum tuberosum clone 107D04 S-adenosyl-L-methionine synthetase-like mRNA, complete cds	4.761904762
CLCdnRY10_71734	1	1	277	292	uv|GU593054.1:1-1305	598	613	Weak	Weak	Suspect[293,314];	TRUE_BIOLOGICAL	1279	1		4.777070064
CLCdnRY12_50477	1	1	7	22	uv|DQ391279.1:1-10285	497	512	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	308911	1	Solanum tuberosum chromosome 11 clone RH021O18, complete sequence	4.777070064
CLCdnRY7_24829	1	1	295	310	uv|HQ418395.1:2834-3936	801	786	Weak	Weak	Suspect[311,314];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cytochrome c-type biogenesis protein CcmE-like (LOC102606066), transcript variant X3, mRNA	4.777070064
VdnRY1_23820	1	1	281	296	uv|KC702228.1:1-1023	565	580	Weak	Weak	Suspect[297,314];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.777070064
VdnRY4_20161	1	1	280	296	uv|KM407512.1:886-4985	2756	2772	Weak	Weak	Suspect[297,313];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum vesicle-associated protein 2-2-like (LOC102588851), transcript variant X5, mRNA	5.111821086
CLCdnRY10_44080	1	1	296	311	uv|J02482.1:1-5386-49	2631	2616	Weak	Weak	Suspect[312,313];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum cleavage and polyadenylation specificity factor subunit 6 (LOC102599228), transcript variant X4, mRNA	4.792332268
CLCdnRY7_60958	1	1	291	306	uv|DQ391279.1:1-10285	8584	8569	Weak	Weak	Suspect[307,313];	NO_DATA	1	1		4.792332268
VdnRY1_88297	1	1	18	33	uv|U67875.1:6835-8216	285	300	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579030 (LOC102579030), transcript variant X2, mRNA	4.792332268
VdnRY1_93717	1	1	282	297	uv|U03498.1:4566-4750	54	39	Weak	Weak	Suspect[298,313];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604591 (LOC102604591), transcript variant X1, mRNA	4.792332268
VdnRY5_12106	1	1	296	311	uv|EF216318.1:1961-4116	1632	1617	Weak	Weak	Suspect[312,313];	NO_DATA	1	1	PREDICTED: Solanum tuberosum small nuclear ribonucleoprotein SmD3b-like (LOC102585876), mRNA	4.792332268
VdnRY7_22625	1	1	5	20	uv|JN581377.1:1749-2242	183	168	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102595357 (LOC102595357), mRNA	4.792332268
CLCdnRY9_62914	1	1	13	30	uv|M74186.1:2188-2959	140	157	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum chromosome 5 clone RH045L02, complete sequence	5.448717949
VdnRY4_45115	1	1	286	302	uv|U89961.1:1-4240	3880	3864	Weak	Weak	Suspect[303,312];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum dirigent protein 17-like (LOC102603105), transcript variant X2, mRNA	5.128205128
CLCdnRY10_77999	1	1	17	32	uv|AY568055.1:6692-7837	142	157	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102603960 (LOC102603960), mRNA	4.807692308
CLCdnRY12_17926	1	1	7	22	uv|M29363.1:3595-3692	43	28	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587975 (LOC102587975), mRNA	4.807692308
CLCdnRY12_52540	1	1	293	308	uv|J02459.1:1-48502-49	29844	29859	Weak	Weak	Suspect[309,312];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Camelina sativa uncharacterized LOC104699374 (LOC104699374), mRNA	4.807692308
CLCdnRY12_78989	1	1	7	22	uv|M29363.1:3595-3692	43	28	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587975 (LOC102587975), mRNA	4.807692308
CLCdnRY6_82599	1	1	17	32	uv|U89961.1:1-4240	539	554	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102581981 (LOC102581981), mRNA	4.807692308
CLCdnRY9_53802	1	1	274	289	uv|X53127.1:443-904	194	179	Weak	Weak	Suspect[290,312];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590140 (LOC102590140), mRNA	4.807692308
SdnRY1_67247	1	1	289	306	uv|M77169.1:820-5161	2553	2570	Weak	Weak	Suspect[307,311];	TRUE_BIOLOGICAL	1485	1	Solanum lycopersicum cultivar I-3 chromosome 1	5.466237942
SdnRY1_67426	1	1	277	293	uv|KU936036.1:2396-3564	374	358	Weak	Weak	Suspect[294,311];	NO_DATA	1	1	Solanum pennellii chromosome ch12, complete genome	5.144694534
VdnRY4_40607	1	1	13	29	uv|KC702182.1:1-1023	601	617	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable indole-3-acetic acid-amido synthetase GH3.5 (LOC102603612), transcript variant X2, mRNA	5.144694534
CLCdnRY1_41916	1	1	16	31	uv|M77169.1:820-5161	3947	3932	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060416 (LOC107060416), mRNA	4.823151125
VdnRY1_80940	1	1	2	17	uv|L08817.1:9536-9583-49	82	67	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable galacturonosyltransferase-like 10 (LOC102603101), mRNA	4.823151125
CLCdnRY1_3817	1	1	279	294	uv|M16217.1:2614-2712	24	9	Weak	Weak	Suspect[295,311];	NO_DATA	1	1	PREDICTED: Solanum tuberosum beta-xylosidase/alpha-L-arabinofuranosidase 2-like (LOC102589670), mRNA	4.823151125
CLCdnRY9_48010	1	1	23	38	uv|M74186.1:4309-4405	48	33	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	Solanum lycopersicum NBS-LRR resistance protein-like protein (Mi-1A) pseudogene on chromosome 6	4.823151125
VdnRY1_17709	1	1	16	31	uv|JN874481.1:57-2095	333	318	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	3705	1	Solanum lycopersicum cultivar I-3 chromosome 2	4.823151125
VdnRY4_27955	1	1	2	17	uv|Z32692.1:5183-6220	145	130	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	10240	1	Solanum stoloniferum isolate SS16 chloroplast, complete genome	4.823151125
VdnRY6_31554	1	1	295	310	uv|U89671.1:1-253	98	83	Weak	Weak	Suspect[311,311];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum GDSL esterase/lipase At1g28590-like (LOC102592229), mRNA	4.823151125
CLCdnRY2_2185	1	1	7	51	uv|NGB00752.1:1-70	6	50	Moderate	Moderate	Suspect[1,6];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum vegetative cell wall protein gp1-like (LOC102599437), mRNA	14.19354839
CLCdnRY12_29750	1	1	7	38	uv|JX992842.1:2542-2849	301	270	Strong	Strong	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	10
CLCdnRY6_29766	1	1	7	38	uv|JX992842.1:2542-2849	301	270	Strong	Strong	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	10
CLCdnRY11_74709	1	1	24	40	uv|EU496100.1:270-2269	570	586	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102591881 (LOC102591881), ncRNA	5.161290323
CLCdnRY4_37358	1	1	286	302	uv|U13843.1:1887-9923	6400	6416	Weak	Weak	Suspect[303,310];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase RING1 (LOC102578980), transcript variant X8, mRNA	5.161290323
VdnRY1_82560	1	1	22	38	uv|KC702167.1:1-1135	929	913	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum methionine aminopeptidase 1B, chloroplastic (LOC102585013), transcript variant X2, mRNA	5.161290323
CLCdnRY1_43931	1	1	14	30	uv|KY031726.1:1-7905	5546	5530	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 41 (LOC102589682), transcript variant X2, mRNA	5.161290323
SdnRY1_67575	1	1	280	295	uv|L08860.1:1-1129	709	694	Weak	Weak	Suspect[296,310];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061438 (LOC107061438), ncRNA	4.838709677
VdnRY1_12164	1	1	22	37	uv|Z22761.1:7913-8742-49	804	819	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	10088	1		4.838709677
SdnRY1_67695	1	1	12	28	uv|KC702182.1:1-1023	411	427	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum zinc finger protein ZAT11-like (LOC102584363), mRNA	5.177993528
SdnRY1_67734	1	1	25	41	uv|NGB00055.1:1-1950	557	541	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	558016	1	Solanum pennellii chromosome ch11, complete genome	5.177993528
CLCdnRY10_67278	1	1	285	300	uv|J02459.1:1-48502-49	29412	29397	Weak	Weak	Suspect[301,309];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch04, complete genome	4.854368932
SdnRY1_67852	1	1	15	30	uv|V00604.2:1-6407-49	4265	4280	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	10861	1	Solanum pennellii chromosome ch09, complete genome	4.854368932
CLCdnRY12_51227	1	1	1	16	uv|J02459.1:1-48502-49	41767	41782	Weak	Weak	None	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592287 (LOC102592287), transcript variant X2, mRNA	4.854368932
CLCdnRY2_45454	1	1	294	309	uv|AF379854.1:3-2710	683	698	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	Solanum pennellii chromosome ch02, complete genome	4.854368932
CLCdnRY7_48823	1	1	275	290	uv|KF718979.1:2206-6730	419	404	Weak	Weak	Suspect[291,309];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 3	4.854368932
SdnRY1_67669	1	1	289	304	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[305,309];	TRUE_BIOLOGICAL	10699	1	Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102603980), mRNA<>Solanum tuberosum clone St-TNT24 chlorophyll a-b binding protein 3C-like mRNA mRNA, complete cds	4.854368932
VdnRY2_9881	1	1	17	32	uv|KF718979.1:2206-6730	2122	2107	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589280 (LOC102589280), mRNA	4.854368932
VdnRY4_49290	1	1	1	16	uv|U13843.1:1887-9923	4637	4622	Weak	Weak	None	TRUE_BIOLOGICAL	325454	1	Sistotrema resinicystidium isolate FCUG 2188 25S large subunit ribosomal RNA gene, partial sequence	4.854368932
CLCdnRY10_63603	1	1	282	299	uv|M35007.1:1-864	519	502	Weak	Weak	Suspect[300,308];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	5.519480519
VdnRY7_18772	1	1	275	291	uv|KC702165.1:1-1023	644	628	Weak	Weak	Suspect[292,308];	NO_DATA	1	1	PREDICTED: Solanum tuberosum polyadenylate-binding protein 8-like (LOC102585145), mRNA	5.194805195
VdnRY6_26070	1	1	11	27	uv|U03445.1:208-306	90	74	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum potassium transporter 7 (LOC102582759), mRNA	5.194805195
CLCdnRY12_50443	1	1	284	299	uv|KF718989.1:2199-3181	126	111	Weak	Weak	Suspect[300,308];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588109 (LOC102588109), transcript variant X2, mRNA	4.87012987
CLCdnRY2_57388	1	1	279	294	uv|X51450.1:2521-3852	395	410	Weak	Weak	Suspect[295,308];	TRUE_BIOLOGICAL	1279	1		4.87012987
CLCdnRY6_82191	1	1	18	33	uv|M77169.1:820-5161	3615	3600	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	1485	1	Solanum pennellii chromosome ch08, complete genome	4.87012987
CLCdnRY10_24478	1	1	283	298	uv|L07041.1:1-670	57	42	Weak	Weak	Suspect[299,308];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	4.87012987
CLCdnRY2_58206	1	1	13	28	uv|HQ245711.1:9357-9468	32	47	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum folate-biopterin transporter 1, chloroplastic-like (LOC102580295), mRNA	4.87012987
CLCdnRY7_34472	1	1	286	301	uv|EU729726.1:155-394	150	135	Weak	Weak	Suspect[302,308];	NO_DATA	1	1	PREDICTED: Solanum tuberosum alcohol dehydrogenase-like 1 (LOC102583366), transcript variant X2, mRNA	4.87012987
CLCdnRY8_41537	1	1	20	35	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102578242), mRNA	4.87012987
VdnRY1_62424	1	1	6	21	uv|AF123770.1:15289-15411	14	29	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum dehydration-responsive element-binding protein 2C-like (LOC102601423), mRNA	4.87012987
CLCdnRY9_58260	1	1	276	294	uv|J01783.1:4575-7894-49	3000	3018	Moderate	Moderate	Suspect[295,307];	TRUE_BIOLOGICAL	724	1	PREDICTED: Solanum tuberosum uncharacterized protein At1g04910 (LOC102589801), mRNA	5.863192182
VdnRY1_32241	1	1	270	287	uv|V00604.2:1-6407-49	5008	5025	Weak	Weak	Suspect[1,18];Suspect[288,307];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum lycopersicum 2-oxoglutarate-Fe(II) type oxidoreductase hxnY (LOC101264216), transcript variant X6, mRNA	5.537459283
CLCdnRY4_54261	1	1	24	40	uv|M16217.1:1-2529	2006	2022	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum leucine-rich repeat extensin-like protein 6 (LOC107058135), mRNA	5.211726384
CLCdnRY2_44650	1	1	5	20	uv|J02459.1:1-48502-49	23886	23901	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	10699	1		4.885993485
CLCdnRY3_50330	1	1	5	20	uv|FJ931533.1:7978-12753-49	993	1008	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	7215	1	Solanum tuberosum chromosome 5 clone RH126H02, complete sequence	4.885993485
SdnRY1_68150	1	1	20	35	uv|KC702231.1:1-1021	954	969	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch05, complete genome	4.885993485
SdnRY1_68150	1	1	25	40	uv|EU496100.1:270-2269	267	282	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	Solanum pennellii chromosome ch05, complete genome	4.885993485
VdnRY1_32241	1	1	19	34	uv|J01783.1:4575-7894-49	640	625	Weak	Weak	Suspect[1,18];Suspect[288,307];	TRUE_BIOLOGICAL	724	1	PREDICTED: Solanum lycopersicum 2-oxoglutarate-Fe(II) type oxidoreductase hxnY (LOC101264216), transcript variant X6, mRNA	4.885993485
CLCdnRY11_50043	1	1	17	32	uv|M34305.1:3197-4538	376	361	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum callose synthase 7-like (LOC102602725), transcript variant X2, mRNA	4.885993485
VdnRY5_60895	1	1	273	288	uv|KC702182.1:1-1023	312	297	Weak	Weak	Suspect[289,307];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum FRIGIDA-like protein 4a (LOC102588299), transcript variant X1, misc_RNA	4.885993485
VdnRY6_29133	1	1	10	25	uv|KF718989.1:2199-3181	111	126	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588109 (LOC102588109), transcript variant X1, mRNA	4.885993485
VdnRY3_42411	1	1	270	291	uv|AF379854.1:3-2710	1684	1663	Weak	Weak	Suspect[292,306];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 4	6.862745098
CLCdnRY3_68962	1	1	15	31	uv|AF129072.1:907-3477	390	406	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum AF4/FMR2 family member 4 (LOC101245650), transcript variant X5, misc_RNA	5.22875817
CLCdnRY4_40072	1	1	269	285	uv|EU360889.1:4417-6776-46	860	876	Weak	Weak	Suspect[286,306];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598273 (LOC102598273), mRNA	5.22875817
CLCdnRY10_79852	1	1	6	21	uv|KC702194.1:1-1023	755	740	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch05, complete genome	4.901960784
CLCdnRY9_5277	1	1	10	25	uv|KM407508.1:753-839	9	24	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch11, complete genome	4.901960784
VdnRY1_58589	1	1	267	282	uv|L05669.1:1-1770	910	895	Weak	Weak	Suspect[283,306];	TRUE_BIOLOGICAL	620	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.901960784
VdnRY5_48521	1	1	283	305	uv|Z29589.1:3211-4486	883	905	Weak	Weak	None	TRUE_BIOLOGICAL	4527	1	PREDICTED: Solanum tuberosum pollen-specific leucine-rich repeat extensin-like protein 1 (LOC107060823), mRNA	7.213114754
CLCdnRY3_39531	1	1	275	292	uv|U67875.1:6541-6683	18	35	Weak	Weak	Suspect[293,305];	NO_DATA	1	1	Solanum tuberosum homeobox protein HD1 (LOC102600529), mRNA<>Solanum tuberosum class II knox protein (HOX2) mRNA, complete cds	5.573770492
VdnRY1_55989	1	1	283	298	uv|KF719005.1:2205-5132	1059	1074	Weak	Weak	Suspect[299,305];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum probable phospholipid hydroperoxide glutathione peroxidase (LOC102603592), mRNA	4.918032787
VdnRY1_105787	1	1	277	292	uv|KC702172.1:1-1026	84	69	Weak	Weak	Suspect[293,305];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum ADP-ribosylation factor 1 (LOC102582483), mRNA	4.918032787
CLCdnRY10_40677	1	1	276	291	uv|U47626.2:1-490	130	115	Weak	Weak	Suspect[292,305];	TRUE_BIOLOGICAL	1743	1	PREDICTED: Solanum tuberosum patellin-3-like (LOC102597890), mRNA	4.918032787
CLCdnRY3_40241	1	1	21	36	uv|U13843.1:1887-9923	1788	1773	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum ubiquitin carboxyl-terminal hydrolase 12-like (LOC102586466), mRNA	4.918032787
CLCdnRY5_74324	1	1	269	284	uv|DQ391279.1:1-10285	625	640	Weak	Weak	Suspect[285,305];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum probable polygalacturonase At1g80170 (LOC102585179), mRNA	4.918032787
CLCdnRY12_94607	1	1	271	287	uv|JN874481.1:57-2095	350	334	Weak	Weak	Suspect[288,304];	TRUE_BIOLOGICAL	3705	1	Enoploctenus sp. ARP-2015 isolate 1R11 large subunit ribosomal RNA gene, partial sequence	5.263157895
VdnRY2_22493	1	1	288	304	uv|KM407512.1:886-4985	2455	2471	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-3 (LOC102594706), transcript variant X2, mRNA	5.263157895
CLCdnRY5_56221	1	1	266	281	uv|GU593055.1:4102-4364	190	205	Weak	Weak	Suspect[282,304];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.934210526
CLCdnRY5_56427	1	1	2	17	uv|JF909482.1:3850-8059	2274	2259	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 1	4.934210526
SdnRY1_68938	1	1	279	294	uv|M16217.1:3121-3879-49	542	527	Weak	Weak	Suspect[295,304];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum chromosome 11 clone RH021O18, complete sequence	4.934210526
VdnRY2_43159	1	1	273	288	uv|M34305.1:3197-4538	136	151	Weak	Weak	Suspect[289,304];	TRUE_BIOLOGICAL	6237	1	Homo sapiens BAC clone CH17-222N15 from chromosome 1, complete sequence	4.934210526
VdnRY7_5888	1	1	2	17	uv|EF437940.1:7199-10690-48	575	560	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	PREDICTED: Solanum pennellii F-box protein At5g46170-like (LOC107011125), mRNA	4.934210526
VdnRY5_1983	1	1	11	26	uv|DQ666274.1:249-3225	2792	2807	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586591 (LOC102586591), mRNA	4.934210526
VdnRY7_11474	1	1	20	35	uv|JN204888.1:3052-3077-49	55	70	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062317 (LOC107062317), mRNA	4.934210526
VdnRY1_113238	1	1	11	29	uv|J01636.1:1-7477	4457	4439	Moderate	Moderate	Suspect[1,10];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable inactive serine/threonine-protein kinase scy1 (LOC102584596), mRNA	5.940594059
CLCdnRY12_67438	1	1	280	297	uv|Z46234.1:664-3443	1344	1361	Weak	Weak	Suspect[298,303];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum GILT-like protein F37H8.5 (LOC102604365), mRNA	5.610561056
CLCdnRY11_80074	1	1	277	293	uv|U55760.1:1-2749	588	572	Weak	Weak	Suspect[294,303];	TRUE_BIOLOGICAL	558016	1	Solanum lycopersicum cultivar I-3 chromosome 1	5.280528053
SdnRY1_70855	1	1	277	293	uv|U02436.1:3152-4436	648	664	Weak	Weak	Suspect[294,303];	TRUE_BIOLOGICAL	4930	1	Homo sapiens chromosome 4 clone B55B24 map 4q25, complete sequence	5.280528053
SdnRY1_83422	1	1	8	24	uv|GU593055.1:13024-13902-49	18	2	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	2132	1	Solanum pennellii chromosome ch10, complete genome	5.280528053
CLCdnRY10_65395	1	1	285	300	uv|KC503967.1:1442-2279	761	746	Weak	Weak	Suspect[301,303];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable prolyl 4-hydroxylase 12 (LOC102604428), mRNA	4.95049505
CLCdnRY11_38883	1	1	287	302	uv|JN581374.1:616-2149	296	311	Weak	Weak	Suspect[303,303];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum exocyst complex component EXO70A1-like (LOC102606224), mRNA	4.95049505
VdnRY1_17449	1	1	288	303	uv|EF437940.1:3516-6082	584	569	Weak	Weak	None	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor 1-like (LOC102587576), mRNA	4.95049505
VdnRY6_2729	1	1	14	29	uv|KF719005.1:2205-5132	1414	1429	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum kirola-like (LOC102584942), mRNA	4.95049505
CLCdnRY1_12730	1	1	7	23	uv|Z46234.1:7923-9273	967	983	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum dihydrolipoyl dehydrogenase 1, mitochondrial (LOC102605442), mRNA	5.298013245
CLCdnRY6_61723	1	1	267	282	uv|JF909482.1:3850-8059	3581	3596	Weak	Weak	Suspect[283,302];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum lycopersicum protein MALE DISCOVERER 2-like (LOC101251153), transcript variant X2, mRNA	4.966887417
SdnRY1_83593	1	1	273	288	uv|J02482.1:1-5386-49	3591	3606	Weak	Weak	Suspect[289,302];	TRUE_BIOLOGICAL	10842	1	Solanum pennellii chromosome ch10, complete genome	4.966887417
CLCdnRY11_66085	1	1	8	23	uv|EF036511.1:4679-4770	17	2	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	Solanum demissum chromosome 11 clone PGEC561, complete sequence	4.966887417
CLCdnRY11_84287	1	1	13	28	uv|LC121524.1:2980-3796	686	701	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	Solanum anguivi voucher K:Vorontsova et al. 1302 chloroplast, complete genome	4.966887417
CLCdnRY7_5465	1	1	281	296	uv|X05868.1:399-578	123	138	Weak	Weak	Suspect[297,302];	NO_DATA	1	1	PREDICTED: Solanum tuberosum flavonol synthase/flavanone 3-hydroxylase-like (LOC102590301), mRNA	4.966887417
CLCdnRY7_19399	1	1	7	22	uv|NGB00051.1:1428-2848	1305	1290	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596176 (LOC102596176), mRNA	4.966887417
VdnRY6_20964	1	1	14	29	uv|X53127.1:443-904	180	195	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum plant intracellular Ras-group-related LRR protein 7-like (LOC102600012), mRNA	4.966887417
CLCdnRY12_80502	1	1	278	295	uv|DQ883671.3:1-992	74	57	Weak	Weak	Suspect[296,301];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	5.647840532
VdnRY4_24441	1	1	274	290	uv|M64753.1:1943-3400	1292	1276	Weak	Weak	Suspect[291,301];	TRUE_BIOLOGICAL	590	1	Solanum stoloniferum CC-NBS-LRR protein kinase gene, complete cds	5.315614618
CLCdnRY10_78065	1	1	2	17	uv|KC702178.1:1-2022	885	870	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	196118	1		4.983388704
SdnRY1_83658	1	1	18	33	uv|JN874480.1:1050-2714	1073	1088	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	3701	1		4.983388704
CLCdnRY12_33174	1	1	281	296	uv|NGB00029.1:2153-2699	190	205	Weak	Weak	Suspect[297,301];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum probable pectate lyase 4 (LOC102593229), transcript variant X2, mRNA	4.983388704
SdnRY1_83609	1	1	278	293	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[294,301];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch02, complete genome	4.983388704
VdnRY2_15640	1	1	272	287	uv|KF853601.1:1021-3588	1201	1216	Weak	Weak	Suspect[288,301];	TRUE_BIOLOGICAL	7711	1	Solanum lycopersicum cultivar I-3 chromosome 9	4.983388704
VdnRY3_48062	1	1	272	287	uv|X13003.1:2753-4028	638	623	Weak	Weak	Suspect[288,301];	TRUE_BIOLOGICAL	561	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592015 (LOC102592015), mRNA	4.983388704
VdnRY6_12782	1	1	271	286	uv|KF718978.1:2204-3575	1249	1234	Weak	Weak	Suspect[287,301];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580511 (LOC102580511), mRNA	4.983388704
VdnRY2_123749	1	1	1	191	uv|JX310866.1:2211-2467	23	217	Strong	Strong	None	NO_DATA	1	1	Reporter vector pBNP1, complete sequence	63.33333333
VdnRY2_123749	1	1	1	178	uv|U37573.1:2706-4083	508	331	Strong	Strong	None	NO_DATA	1	1	Reporter vector pBNP1, complete sequence	59
VdnRY2_123749	1	1	185	300	uv|U09365.1:7452-8024	312	197	Strong	Strong	None	NO_DATA	1	1	Reporter vector pBNP1, complete sequence	38.33333333
CLCdnRY10_55246	1	1	24	47	uv|M16217.1:1-2529	2328	2306	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 4	7.666666667
CLCdnRY10_28364	1	1	8	24	uv|Z22761.1:1-5585	3563	3579	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	153135	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061793 (LOC107061793), transcript variant X2, ncRNA	5.333333333
CLCdnRY4_27253	1	1	8	24	uv|Z22761.1:1-5585	3563	3579	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	153135	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061793 (LOC107061793), transcript variant X2, ncRNA	5.333333333
CLCdnRY10_43867	1	1	263	278	uv|GU593054.1:6136-8806	476	491	Weak	Weak	Suspect[279,300];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum TVP38/TMEM64 family membrane protein slr0305 (LOC101257596), mRNA	5
SdnRY1_83766	1	1	273	288	uv|U55760.1:1-2749	794	779	Weak	Weak	Suspect[289,300];	TRUE_BIOLOGICAL	558016	1	Solanum lycopersicum cultivar I-3 chromosome 3	5
VdnRY1_54687	1	1	266	281	uv|LC121524.1:2980-3796	188	173	Weak	Weak	Suspect[282,300];	NO_DATA	1	1	Solanum pennellii chromosome ch12, complete genome	5
CLCdnRY4_43353	1	1	263	278	uv|GU593054.1:6136-8806	476	491	Weak	Weak	Suspect[279,300];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum TVP38/TMEM64 family membrane protein slr0305 (LOC101257596), mRNA	5
CLCdnRY10_78935	1	1	1	206	uv|EF437940.1:3516-6082	2426	2221	Strong	Strong	None	NO_DATA	1	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	68.56187291
CLCdnRY10_78935	1	1	226	299	uv|NGB00024.1:1275-1702	94	167	Strong	Strong	None	TRUE_BIOLOGICAL	91347	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	24.41471572
CLCdnRY10_78935	1	1	205	274	uv|U75323.1:1187-1308	70	1	Strong	Strong	None	TRUE_BIOLOGICAL	91347	1	Acinetobacter sp. FDAARGOS_493 chromosome, complete genome	23.07692308
CLCdnRY11_30505	1	1	14	30	uv|M77169.1:820-5161	2172	2188	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593680 (LOC102593680), transcript variant X2, mRNA	5.351170569
CLCdnRY10_77061	1	1	271	286	uv|KF718979.1:2206-6730	170	185	Weak	Weak	Suspect[287,299];	TRUE_BIOLOGICAL	3701	1	Anaerococcus prevotii DSM 20548, complete genome	5.016722408
VdnRY4_26787	1	1	2	17	uv|KC702209.1:1-2022	621	636	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Capsicum annuum pentatricopeptide repeat-containing protein At5g46460, mitochondrial (LOC107859152), mRNA	5.016722408
CLCdnRY11_64092	1	1	265	280	uv|U09476.1:1-864	768	783	Weak	Weak	Suspect[281,299];	TRUE_BIOLOGICAL	581	1	PREDICTED: Solanum pennellii ASC1-like protein (LOC107020389), mRNA	5.016722408
CLCdnRY11_80034	1	1	9	24	uv|M16192.1:1-2517-49	1444	1429	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum aspartic proteinase-like protein 2 (LOC102586351), transcript variant X2, mRNA	5.016722408
CLCdnRY12_92128	1	1	15	30	uv|KJ541666.1:4495-4534-49	74	89	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein NUCLEAR FUSION DEFECTIVE 4-like (LOC102605820), mRNA	5.016722408
CLCdnRY12_92128	1	1	16	31	uv|JN581377.1:1749-2242	242	257	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum protein NUCLEAR FUSION DEFECTIVE 4-like (LOC102605820), mRNA	5.016722408
CLCdnRY9_31097	1	1	278	294	uv|JN874481.1:57-2095	2003	2019	Weak	Weak	Suspect[295,298];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602232 (LOC102602232), transcript variant X1, mRNA	5.369127517
CLCdnRY10_61240	1	1	22	38	uv|AJ310442.1:3933-4082	44	28	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable receptor-like protein kinase At1g67000 (LOC102578289), mRNA	5.369127517
CLCdnRY8_22549	1	1	277	293	uv|L05669.1:1-1770	1463	1447	Weak	Weak	Suspect[294,298];	TRUE_BIOLOGICAL	620	1		5.369127517
CLCdnRY1_55004	1	1	1	16	uv|NGB00587.1:1-3232	2378	2363	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1		5.033557047
SdnRY1_84038	1	1	16	31	uv|X75458.1:2073-2170	56	41	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	5.033557047
VdnRY1_80675	1	1	259	274	uv|KF718979.1:2206-6730	1396	1411	Weak	Weak	Suspect[275,298];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum protein MATERNALLY EXPRESSED GENE 5-like (LOC102595599), transcript variant X5, mRNA	5.033557047
VdnRY4_10392	1	1	21	36	uv|GU593054.1:6136-8806	2079	2064	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable WRKY transcription factor 21 (LOC102588457), transcript variant X3, mRNA	5.033557047
CLCdnRY10_75267	1	1	264	280	uv|JX310867.1:868-3760	1771	1755	Weak	Weak	Suspect[281,297];	TRUE_BIOLOGICAL	1224	1	Solanum pennellii chromosome ch03, complete genome	5.387205387
VdnRY1_140898	1	1	3	19	uv|U67875.1:6835-8216	859	875	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	4895	1	Solanum lycopersicum cultivar I-3 chromosome 9	5.387205387
CLCdnRY2_63060	1	1	266	281	uv|KF718990.1:2209-4765	655	670	Weak	Weak	Suspect[282,297];	TRUE_BIOLOGICAL	5052	1	Solanum pennellii chromosome ch05, complete genome	5.050505051
CLCdnRY8_38881	1	1	274	289	uv|JN581374.1:616-2149	290	305	Weak	Weak	Suspect[290,297];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum DELLA protein GAI-like (LOC101262579), transcript variant X1, mRNA	5.050505051
VdnRY5_4201	1	1	271	286	uv|KC702201.1:1-1023	110	125	Weak	Weak	Suspect[287,297];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579399 (LOC102579399), mRNA	5.050505051
VdnRY7_21430	1	1	268	283	uv|KU936037.1:2198-2313	63	78	Weak	Weak	Suspect[284,297];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102596532 (LOC102596532), mRNA	5.050505051
CLCdnRY9_59664	1	1	13	29	uv|FJ750577.1:368-2560	1072	1056	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	4447	1	Solanum pennellii chromosome ch11, complete genome	5.405405405
CLCdnRY10_20191	1	1	3	18	uv|AF058756.1:5533-5628	16	1	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	151341	1	Solanum pennellii chromosome ch02, complete genome	5.067567568
CLCdnRY10_62785	1	1	21	36	uv|U67875.1:6835-8216	461	476	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	4895	1		5.067567568
VdnRY1_18184	1	1	261	276	uv|X53127.1:443-904	109	124	Weak	Weak	Suspect[277,296];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580916 (LOC102580916), mRNA	5.067567568
CLCdnRY4_61868	1	1	21	36	uv|U67875.1:6835-8216	461	476	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	4895	1		5.067567568
CLCdnRY5_75873	1	1	268	283	uv|KC503967.1:1442-2279	761	746	Weak	Weak	Suspect[284,296];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable prolyl 4-hydroxylase 12 (LOC102604428), mRNA	5.067567568
VdnRY5_51292	1	1	5	20	uv|U89672.1:894-975	39	54	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ketol-acid reductoisomerase, chloroplastic (LOC102595769), mRNA	5.067567568
VdnRY7_5698	1	1	281	296	uv|NGB00407.1:3-377	59	44	Weak	Weak	None	NO_DATA	1	1	Solanum pennellii chromosome ch03, complete genome	5.067567568
CLCdnRY11_80370	1	1	255	271	uv|JX025642.1:6416-6572	90	74	Weak	Weak	Suspect[272,295];	NO_DATA	1	1	Solanum pennellii chromosome ch03, complete genome	5.423728814
VdnRY2_1943	1	1	14	30	uv|J02482.1:1-5386-49	3527	3543	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	10842	1	Solanum lycopersicum cultivar I-3 chromosome 6	5.423728814
VdnRY2_16188	1	1	23	39	uv|L08860.1:1-1129	518	502	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum inositol-tetrakisphosphate 1-kinase 1-like (LOC107060680), mRNA	5.423728814
CLCdnRY11_80370	1	1	240	255	uv|U64448.1:1727-2734	173	188	None	Weak	Suspect[272,295];	TRUE_BIOLOGICAL	10358	1	Solanum pennellii chromosome ch03, complete genome	5.084745763
CLCdnRY3_77399	1	1	270	285	uv|U13843.1:1887-9923	3435	3450	Weak	Weak	Suspect[286,295];	TRUE_BIOLOGICAL	325454	1		5.084745763
VdnRY4_80727	1	1	9	24	uv|KF719005.1:2205-5132	542	527	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized protein PAM68-like (LOC102602569), mRNA	5.084745763
CLCdnRY11_81673	1	1	1	16	uv|U29899.1:1847-4463	1756	1741	Weak	Weak	Suspect[293,295];	TRUE_BIOLOGICAL	4892	1		5.084745763
CLCdnRY11_81673	1	1	277	292	uv|JF909482.1:3850-8059	768	783	Weak	Weak	Suspect[293,295];	TRUE_BIOLOGICAL	3701	1		5.084745763
CLCdnRY12_17876	1	1	264	279	uv|NGB00055.1:1-1950	1071	1086	Weak	Weak	Suspect[280,295];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum mitochondrial import inner membrane translocase subunit TIM50 (LOC102588668), mRNA	5.084745763
CLCdnRY1_19224	1	1	265	280	uv|JN381160.1:2018-4126	581	596	Weak	Weak	Suspect[281,295];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 (LOC102587072), transcript variant X1, mRNA	5.084745763
CLCdnRY6_51851	1	1	14	29	uv|KC702194.1:1-1023	962	947	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable WRKY transcription factor 65 (LOC102597639), transcript variant X2, mRNA	5.084745763
VdnRY1_29157	1	1	21	36	uv|KF680545.1:1-2837	2463	2478	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 40S ribosomal protein S9-2-like (LOC102584937), transcript variant X2, mRNA	5.084745763
VdnRY1_54426	1	1	15	30	uv|NGB00176.1:1-51	17	2	Weak	Weak	Suspect[1,14];	TRUE_ARTIFICIAL	81077	81077	Solanum lycopersicum chromosome ch07, complete genome	5.084745763
CLCdnRY10_70310	1	1	19	37	uv|KC847296.1:1602-2043	362	380	Moderate	Moderate	Suspect[1,18];	TRUE_BIOLOGICAL	286	1		6.12244898
CLCdnRY11_84876	1	1	264	279	uv|FJ750577.1:368-2560	1451	1436	Weak	Weak	Suspect[280,294];	TRUE_BIOLOGICAL	4447	1	Solanum pennellii chromosome ch02, complete genome	5.102040816
SdnRY1_84468	1	1	267	282	uv|KY031726.1:1-7905	6578	6593	Weak	Weak	Suspect[283,294];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum myb-related protein Myb4-like (LOC102588336), mRNA	5.102040816
CLCdnRY10_25435	1	1	19	34	uv|DQ391279.1:13402-14600	1118	1103	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein-L-isoaspartate O-methyltransferase 1-like (LOC102598632), mRNA	5.102040816
CLCdnRY12_88767	1	1	267	282	uv|FJ160466.1:1899-7260-49	5181	5166	Weak	Weak	Suspect[283,294];	NO_DATA	1	1	Bordetella trematum strain F581 chromosome, complete genome	5.102040816
VdnRY6_36316	1	1	10	25	uv|KC702207.1:1-1143	95	110	Weak	Weak	Suspect[1,9];	TRUE_ARTIFICIAL	81077	81077	Solanum tuberosum 40S ribosomal protein S19-like (LOC102577827), mRNA<>Solanum tuberosum clone 186F02 40S ribosomal protein S19-like mRNA, complete cds	5.102040816
VdnRY4_25255	1	1	263	280	uv|AF379854.1:4263-5841	172	189	Weak	Weak	Suspect[281,293];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum tRNA pseudouridine(38/39) synthase (LOC102588947), mRNA	5.802047782
CLCdnRY11_54666	1	1	266	282	uv|M34305.1:3197-4538	1278	1294	Weak	Weak	Suspect[283,293];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum pollen-specific leucine-rich repeat extensin-like protein 1 (LOC107060823), mRNA	5.460750853
CLCdnRY11_38293	1	1	18	33	uv|EU546815.1:1997-2088	66	81	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	28883	1	PREDICTED: Solanum tuberosum putative U-box domain-containing protein 50 (LOC102583320), mRNA	5.119453925
CLCdnRY3_76201	1	1	278	293	uv|AF028837.1:887-1131	114	129	Weak	Weak	None	NO_DATA	1	1	Solanum pennellii chromosome ch12, complete genome	5.119453925
SdnRY1_84575	1	1	277	292	uv|KF853601.1:1021-3588	250	265	Weak	Weak	Suspect[293,293];	TRUE_BIOLOGICAL	7711	1	Solanum pennellii chromosome ch03, complete genome	5.119453925
VdnRY4_25255	1	1	258	273	uv|M16217.1:1-2529	953	938	Weak	Weak	Suspect[281,293];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum tRNA pseudouridine(38/39) synthase (LOC102588947), mRNA	5.119453925
CLCdnRY9_63739	1	1	2	17	uv|L08922.1:441-537	22	37	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102605573 (LOC102605573), ncRNA	5.119453925
SdnRY1_84592	1	1	5	20	uv|KF718979.1:2206-6730	308	293	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 4	5.119453925
VdnRY2_158841	1	1	267	282	uv|M77815.1:2171-2269	57	42	Weak	Weak	Suspect[283,293];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	5.119453925
VdnRY5_40273	1	1	264	279	uv|J02459.1:1-48502-49	25392	25407	Weak	Weak	Suspect[280,293];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum transcription factor FAMA-like (LOC102586799), mRNA	5.119453925
VdnRY6_2730	1	1	20	35	uv|JX992842.1:12306-12347-49	66	81	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	10639	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584318 (LOC102584318), transcript variant X4, ncRNA	5.119453925
CLCdnRY2_38008	1	1	265	280	uv|L08953.1:1649-1744	38	23	Weak	Weak	Suspect[281,292];	TRUE_BIOLOGICAL	620	1	Solanum lycopersicum cultivar I-3 chromosome 1	5.136986301
CLCdnRY6_50492	1	1	259	274	uv|AY532632.1:5216-5418	185	200	Weak	Weak	Suspect[275,292];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 3	5.136986301
CLCdnRY12_17996	1	1	263	278	uv|KY031725.1:1-5101	1004	1019	Weak	Weak	Suspect[279,292];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum dephospho-CoA kinase-like (LOC102586462), transcript variant X6, mRNA	5.136986301
CLCdnRY10_12014	1	1	4	19	uv|U03992.1:408-1934	1220	1205	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592434 (LOC102592434), mRNA	5.154639175
VdnRY6_25610	1	1	274	289	uv|L08862.1:1-2039	1487	1502	Weak	Weak	Suspect[290,291];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch08, complete genome	5.154639175
CLCdnRY3_48157	1	1	257	272	uv|U13843.1:1887-9923	1822	1837	Weak	Weak	Suspect[273,291];	TRUE_BIOLOGICAL	325454	1	Solanum lycopersicum cultivar I-3 chromosome 7	5.154639175
VdnRY2_79321	1	1	10	25	uv|U67875.1:18-1316	1130	1115	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	4895	1	Solanum lycopersicum cultivar I-3 chromosome 3	5.154639175
CLCdnRY1_29303	1	1	23	40	uv|AF129072.1:907-3477	164	147	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pre-rRNA-processing protein ESF1 (LOC102602551), mRNA	5.862068966
CLCdnRY10_72159	1	1	17	33	uv|JX560397.1:83-5970	2006	1990	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Nicotiana attenuata uncharacterized LOC109219489 (LOC109219489), mRNA	5.517241379
CLCdnRY3_15919	1	1	264	280	uv|AF327712.1:16794-18581	1441	1425	Weak	Weak	Suspect[281,290];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 2-hydroxyisoflavanone dehydratase-like (LOC102586757), mRNA	5.517241379
CLCdnRY3_54373	1	1	257	272	uv|U67875.1:18-1316	715	730	Weak	Weak	Suspect[273,290];	TRUE_BIOLOGICAL	4895	1	Solanum pennellii chromosome ch02, complete genome	5.172413793
CLCdnRY8_24701	1	1	253	268	uv|KF719018.1:2199-2810	543	558	Weak	Weak	Suspect[269,290];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum ACT domain-containing protein ACR3 (LOC102587087), transcript variant X1, mRNA	5.172413793
CLCdnRY9_25832	1	1	255	270	uv|U02436.1:1330-2607	986	971	Weak	Weak	Suspect[271,290];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probable adenylate kinase 6, chloroplastic (LOC102582917), mRNA	5.172413793
VdnRY1_98631	1	1	263	278	uv|JF909482.1:3850-8059	3141	3126	Weak	Weak	Suspect[279,290];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum 60S ribosomal protein L5-like (LOC102594641), mRNA	5.172413793
CLCdnRY10_32963	1	1	255	270	uv|J01783.1:2737-2871	111	96	Weak	Weak	Suspect[271,290];	NO_DATA	1	1	PREDICTED: Capsicum annuum nucleolin-like (LOC107858559), mRNA	5.172413793
CLCdnRY10_61138	1	1	19	34	uv|U02428.1:5900-6359	156	171	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	10375	1		5.172413793
CLCdnRY11_78040	1	1	5	20	uv|JN581377.1:606-767	115	130	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch11, complete genome	5.172413793
CLCdnRY7_66729	1	1	273	288	uv|U75992.1:11880-11976	22	7	Weak	Weak	Suspect[289,290];	TRUE_BIOLOGICAL	91347	1	Solanum pennellii chromosome ch02, complete genome	5.172413793
CLCdnRY11_37647	1	1	9	24	uv|AF379854.1:4263-5841	204	219	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	5820	1		5.190311419
VdnRY2_52462	1	1	265	280	uv|FJ931533.1:7978-12753-49	2775	2760	Weak	Weak	Suspect[281,289];	TRUE_BIOLOGICAL	7147	1	PREDICTED: Solanum tuberosum chitinase domain-containing protein 1 (LOC102605383), transcript variant X1, mRNA	5.190311419
VdnRY2_73900	1	1	271	286	uv|U89929.1:723-1593	357	342	Weak	Weak	Suspect[287,289];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum zinc finger SWIM domain-containing protein 7 (LOC102586723), transcript variant X1, mRNA	5.190311419
VdnRY3_55959	1	1	252	267	uv|Z32692.1:5183-6220	102	117	Weak	Weak	Suspect[268,289];	TRUE_BIOLOGICAL	10240	1	PREDICTED: Solanum tuberosum SCY1-like protein 2 (LOC102595181), mRNA	5.190311419
CLCdnRY10_45466	1	1	4	22	uv|U47120.2:791-908	68	50	Moderate	Moderate	Suspect[1,3];	NO_DATA	1	1	Procalvolia sp. AD1231 28S ribosomal RNA gene, partial sequence	6.25
CLCdnRY10_84031	1	1	271	287	uv|DQ883673.3:1-993	913	897	Weak	Weak	Suspect[288,288];	NO_DATA	1	1	Solanum pennellii chromosome ch03, complete genome	5.555555556
VdnRY2_15750	1	1	256	272	uv|AF310136.1:4127-5198	1037	1021	Weak	Weak	Suspect[277,288];	TRUE_BIOLOGICAL	620	1	Solanum pennellii chromosome ch04, complete genome	5.555555556
VdnRY1_187749	1	1	260	276	uv|M77169.1:820-5161	1628	1644	Weak	Weak	Suspect[277,288];	TRUE_BIOLOGICAL	1485	1	Solanum lycopersicum cultivar I-3 chromosome 5	5.555555556
CLCdnRY10_61184	1	1	23	38	uv|Z32692.1:5183-6220	117	102	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	10240	1	PREDICTED: Solanum tuberosum SCY1-like protein 2 (LOC102595181), mRNA	5.208333333
SdnRY1_85093	1	1	6	21	uv|AY532632.1:5216-5418	200	185	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590884 (LOC102590884), ncRNA	5.208333333
VdnRY2_15750	1	1	261	276	uv|AF379854.1:4263-5841	1188	1173	Weak	Weak	Suspect[277,288];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	5.208333333
CLCdnRY10_72480	1	1	270	285	uv|LC121524.1:5721-6815	762	777	Weak	Weak	Suspect[286,288];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	5.208333333
CLCdnRY12_41446	1	1	23	38	uv|AF379854.1:4263-5841	407	422	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized protein At5g50100, mitochondrial (LOC102586128), mRNA	5.208333333
VdnRY1_7547	1	1	255	270	uv|KC702201.1:1-1023	434	449	Weak	Weak	Suspect[271,288];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum replication protein A 70 kDa DNA-binding subunit B-like (LOC102582531), transcript variant X5, mRNA	5.208333333
CLCdnRY6_8508	1	1	3	24	uv|LC121524.1:2980-3796	519	540	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	PREDICTED: Solanum tuberosum beta-galactosidase 9 (LOC102579815), mRNA	7.317073171
VdnRY1_90054	1	1	249	265	uv|AF379854.1:4263-5841	904	888	Weak	Weak	Suspect[266,287];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum F-box protein PP2-A13-like (LOC102581488), mRNA	5.574912892
VdnRY7_6598	1	1	251	267	uv|U13843.1:1887-9923	2568	2584	Weak	Weak	Suspect[268,287];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum tuberosum 60S ribosomal protein L30-like (LOC102583223), mRNA	5.574912892
VdnRY1_114673	1	1	260	275	uv|EU496089.1:999-1588	316	331	Weak	Weak	Suspect[276,287];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 4	5.226480836
VdnRY1_185474	1	1	1	16	uv|AF379854.1:3-2710	624	609	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	Solanum lycopersicum cultivar I-3 chromosome 7	5.226480836
CLCdnRY11_42146	1	1	259	274	uv|KF680544.1:323-942	456	441	Weak	Weak	Suspect[275,287];	NO_DATA	1	1	Solanum pennellii chromosome ch07, complete genome	5.226480836
CLCdnRY12_74922	1	1	3	18	uv|KF718979.1:2206-6730	3719	3704	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum flap endonuclease GEN-like 1 (LOC102595702), mRNA	5.226480836
CLCdnRY2_30406	1	1	23	38	uv|KF719005.1:2205-5132	2705	2720	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum protein DETOXIFICATION 16-like (LOC102600115), mRNA	5.226480836
VdnRY2_77303	1	1	251	266	uv|L05083.1:3796-4440	165	150	Weak	Weak	Suspect[267,287];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102591088 (LOC102591088), mRNA	5.226480836
CLCdnRY8_23132	1	1	13	29	uv|KC702178.1:1-2022	1941	1925	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum dephospho-CoA kinase-like (LOC102587364), transcript variant X7, mRNA	5.594405594
CLCdnRY11_17547	1	1	9	24	uv|KC702208.1:1-1350	1213	1198	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583724 (LOC102583724), transcript variant X3, mRNA	5.244755245
CLCdnRY10_2213	1	1	3	18	uv|M98046.1:4809-4906	46	31	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588689 (LOC102588689), ncRNA	5.244755245
CLCdnRY1_27550	1	1	247	262	uv|KF718996.1:2914-4532	1296	1311	Weak	Weak	Suspect[263,286];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580559 (LOC102580559), mRNA	5.244755245
CLCdnRY6_53030	1	1	22	37	uv|M16192.1:1-2517-49	1084	1069	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum probable acyl-activating enzyme 1, peroxisomal (LOC102579993), mRNA	5.244755245
VdnRY1_5659	1	1	258	273	uv|L00595.1:1-393	370	355	Weak	Weak	Suspect[274,286];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC107057847 (LOC107057847), mRNA	5.244755245
CLCdnRY12_82050	1	1	1	18	uv|JN874481.1:20319-20375	5	22	Weak	Weak	None	NO_DATA	1	1	Solanum pennellii chromosome ch09, complete genome	5.964912281
CLCdnRY11_78497	1	1	254	269	uv|X70470.1:77-194	58	43	Weak	Weak	Suspect[270,285];	NO_DATA	1	1		5.263157895
CLCdnRY2_58601	1	1	256	271	uv|U25273.1:2884-2891-49	5	20	Weak	Weak	Suspect[272,285];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061064 (LOC107061064), ncRNA	5.263157895
VdnRY3_52779	1	1	11	29	uv|J01636.1:1-7477	4457	4439	Moderate	Moderate	Suspect[1,10];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable inactive serine/threonine-protein kinase scy1 (LOC102584596), mRNA	6.338028169
CLCdnRY2_7485	1	1	265	282	uv|M98046.1:4108-4209	61	44	Weak	Weak	Suspect[283,284];	NO_DATA	1	1	Uncultured bacterium clone F1-50 16S ribosomal RNA gene, partial sequence	5.985915493
VdnRY1_137210	1	1	263	279	uv|M16217.1:1-2529	1260	1276	Weak	Weak	Suspect[280,284];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like (LOC102578356), mRNA	5.633802817
VdnRY1_90055	1	1	246	262	uv|AF379854.1:4263-5841	904	888	Weak	Weak	Suspect[263,284];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum F-box protein PP2-A13-like (LOC102581488), mRNA	5.633802817
VdnRY2_124999	1	1	255	271	uv|KC503967.1:3363-4043-40	344	360	Weak	Weak	Suspect[272,284];	TRUE_BIOLOGICAL	620	1	Solanum lycopersicum cultivar I-3 chromosome 1	5.633802817
CLCdnRY11_73832	1	1	20	35	uv|JX560397.1:83-5970	4258	4243	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor ERF061 (LOC102590166), mRNA	5.281690141
CLCdnRY12_48786	1	1	8	23	uv|KC702186.1:1-274	178	193	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable plastid-lipid-associated protein 13, chloroplastic (LOC102596905), mRNA	5.281690141
VdnRY1_46245	1	1	264	279	uv|Z46234.1:664-3443	328	343	Weak	Weak	Suspect[280,284];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum 1-aminocyclopropane-1-carboxylate oxidase homolog (LOC102597881), transcript variant X2, mRNA	5.281690141
CLCdnRY3_37166	1	1	14	29	uv|KP057689.1:1-859	120	135	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	84111	1	Solanum pennellii chromosome ch06, complete genome	5.300353357
SdnRY1_85811	1	1	22	37	uv|KY031736.1:7167-7181-49	34	49	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	Solanum pennellii chromosome ch12, complete genome	5.300353357
VdnRY2_18934	1	1	12	27	uv|L08817.1:1-2924	276	261	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum pennellii putative pentatricopeptide repeat-containing protein At5g43820 (LOC107009070), transcript variant X5, mRNA	5.300353357
VdnRY1_49020	1	1	15	30	uv|GU593054.1:1-1305	434	449	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060073 (LOC107060073), ncRNA	5.300353357
CLCdnRY7_54829	1	1	5	22	uv|AF379854.1:3-2710	2165	2148	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	5820	1		6.028368794
SdnRY1_85927	1	1	264	280	uv|KF719005.1:2205-5132	2379	2395	Weak	Weak	Suspect[281,282];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch07, complete genome	5.673758865
CLCdnRY7_54829	1	1	4	19	uv|X70481.1:3564-4492	284	299	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	4930	1		5.319148936
CLCdnRY7_58551	1	1	4	19	uv|EF036511.1:4679-4770	3	18	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	Solanum tuberosum clone RH017O12, complete sequence	5.319148936
VdnRY2_9200	1	1	266	281	uv|LC121523.1:7712-7810	32	17	Weak	Weak	Suspect[282,282];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102586186 (LOC102586186), transcript variant X16, mRNA	5.319148936
CLCdnRY5_17882	1	1	263	278	uv|KY031725.1:1-5101	1004	1019	Weak	Weak	Suspect[279,282];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Capsicum annuum dephospho-CoA kinase (LOC107856370), transcript variant X3, mRNA	5.319148936
VdnRY1_164595	1	1	5	20	uv|KC503967.1:3363-4043-40	495	510	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum ethylene receptor homolog (ERS), transcript variant X3, mRNA	5.319148936
CLCdnRY1_51649	1	1	255	272	uv|AY093584.1:3788-6062	1245	1262	Weak	Weak	Suspect[273,281];	TRUE_BIOLOGICAL	5052	1	Solanum lycopersicum cultivar I-3 chromosome 8	6.049822064
CLCdnRY10_15909	1	1	19	34	uv|M16217.1:1-2529	1232	1247	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch11, complete genome	5.338078292
CLCdnRY12_58536	1	1	1	16	uv|KF719004.1:2204-2946	379	364	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583567 (LOC102583567), mRNA	5.338078292
CLCdnRY10_77801	1	1	251	266	uv|JX560397.1:83-5970	326	311	Weak	Weak	Suspect[267,281];	TRUE_BIOLOGICAL	1236	1	Solanum pennellii chromosome ch08, complete genome	5.338078292
CLCdnRY9_23288	1	1	246	261	uv|KY031734.1:8746-8759-49	55	40	Weak	Weak	Suspect[262,281];	NO_DATA	1	1	PREDICTED: Solanum tuberosum clathrin light chain 1-like (LOC102604022), mRNA	5.338078292
VdnRY1_83561	1	1	19	34	uv|KF680544.1:2357-2669	62	47	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	PREDICTED: Solanum tuberosum BI1-like protein (LOC102605126), mRNA	5.338078292
SdnRY1_86156	1	1	24	40	uv|AF061923.1:29-1852	617	601	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	91347	1	Blautia sp. N6H1-15 strain KCTC 15426 chromosome, complete genome	5.714285714
CLCdnRY6_77303	1	1	252	267	uv|M77169.1:820-5161	3161	3146	Weak	Weak	Suspect[268,280];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585294 (LOC102585294), transcript variant X2, mRNA	5.357142857
CLCdnRY9_29684	1	1	253	268	uv|J02459.1:1-48502-49	3907	3892	Weak	Weak	Suspect[269,280];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum diphosphomevalonate decarboxylase-like (LOC102604354), mRNA	5.357142857
VdnRY7_21909	1	1	247	262	uv|U09128.1:3334-10218	4444	4429	Weak	Weak	Suspect[263,280];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase PBS1 (LOC102596991), mRNA	5.357142857
VdnRY3_78713	1	1	246	261	uv|KF718979.1:2206-6730	2125	2110	Weak	Weak	Suspect[262,280];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum KH domain-containing protein At5g56140 (LOC102596196), transcript variant X2, mRNA	5.357142857
VdnRY5_4661	1	1	7	22	uv|KM407512.1:886-4985	1015	1030	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584815 (LOC102584815), mRNA	5.357142857
VdnRY2_71369	1	1	260	276	uv|KF853602.1:1019-2932	509	525	Weak	Weak	Suspect[277,279];	TRUE_BIOLOGICAL	7711	1		5.734767025
CLCdnRY10_66930	1	1	243	258	uv|EU496100.1:270-2269	582	567	Weak	Weak	Suspect[259,279];	NO_DATA	1	1		5.376344086
CLCdnRY10_52672	1	1	17	32	uv|L08860.1:1-1129	709	694	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061438 (LOC107061438), ncRNA	5.376344086
CLCdnRY2_19864	1	1	16	31	uv|DQ391279.1:1-10285	5318	5303	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum transmembrane protein 184A (LOC102600400), transcript variant X2, mRNA	5.376344086
CLCdnRY3_35005	1	1	9	24	uv|KC702183.1:1-1023	240	255	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum peptidyl-prolyl cis-trans isomerase CYP57 (LOC102599071), transcript variant X2, mRNA	5.376344086
VdnRY3_46144	1	1	247	262	uv|FJ931533.1:7978-12753-49	2536	2521	Weak	Weak	Suspect[263,279];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598294 (LOC102598294), mRNA	5.376344086
VdnRY3_85606	1	1	254	269	uv|M16192.1:1-2517-49	1145	1160	Weak	Weak	Suspect[270,279];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum dehydroquinate dehydratase (DD), transcript variant X1, mRNA	5.376344086
VdnRY5_5974	1	1	247	262	uv|AY962893.1:8266-9065	481	496	Weak	Weak	Suspect[263,279];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum tuberosum malate dehydrogenase, mitochondrial-like (LOC102606140), transcript variant X1, mRNA	5.376344086
CLCdnRY1_45923	1	1	248	263	uv|GU593055.1:13024-13902-49	805	790	Weak	Weak	Suspect[264,278];	TRUE_BIOLOGICAL	2093	1	PREDICTED: Solanum tuberosum uncharacterized LOC107059433 (LOC107059433), ncRNA	5.395683453
SdnRY1_86427	1	1	262	277	uv|FJ380061.1:3772-3921	50	65	Weak	Weak	Suspect[278,278];	NO_DATA	1	1		5.395683453
CLCdnRY10_75675	1	1	255	270	uv|KC702164.1:1-1061	504	489	Weak	Weak	Suspect[271,278];	NO_DATA	1	1	Solanum pennellii chromosome ch05, complete genome	5.395683453
CLCdnRY11_45314	1	1	5	20	uv|KC702185.1:1-522	391	406	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable tyrosine-protein phosphatase At1g05000 (LOC102595747), transcript variant X3, misc_RNA	5.395683453
CLCdnRY9_54078	1	1	2	17	uv|X70481.1:3564-4492	825	840	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	4930	1		5.395683453
SdnRY1_86435	1	1	240	255	uv|M10567.1:64-217	36	21	Weak	Weak	Suspect[256,278];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative pentatricopeptide repeat-containing protein At1g64310 (LOC102604937), mRNA	5.395683453
VdnRY1_164594	1	1	5	20	uv|KC503967.1:3363-4043-40	495	510	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum ethylene receptor homolog (ERS), transcript variant X2, mRNA	5.395683453
VdnRY7_14669	1	1	25	40	uv|AY390769.1:1-1000	68	83	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum sodium/pyruvate cotransporter BASS2, chloroplastic (LOC102605368), mRNA	5.395683453
VdnRY3_24429	1	1	2	42	uv|KF719004.1:2204-2946	73	113	Strong	Strong	Suspect[1,1];	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	14.44043321
CLCdnRY12_10642	1	1	134	174	uv|KF719004.1:2204-2946	113	73	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2c gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	14.44043321
CLCdnRY1_52837	1	1	246	268	uv|NGB00583.1:3798-3896	55	33	Weak	Weak	Suspect[269,277];	TRUE_BIOLOGICAL	460517	1	Solanum pennellii chromosome ch12, complete genome	7.942238267
CLCdnRY1_52837	1	1	252	268	uv|AF087042.1:5572-5670	53	37	Weak	Weak	Suspect[269,277];	NO_DATA	1	1	Solanum pennellii chromosome ch12, complete genome	5.776173285
CLCdnRY1_55216	1	1	12	28	uv|KC702205.1:1-1107	194	178	Weak	Weak	Suspect[1,11];	TRUE_ARTIFICIAL	81077	81077	Solanum tuberosum cultivar Desiree 14-3-3 protein isoform 20R gene, complete cds	5.776173285
CLCdnRY3_58319	1	1	253	269	uv|JX560397.1:83-5970	2091	2075	Weak	Weak	Suspect[270,277];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum protein SABRE (LOC102599089), transcript variant X2, mRNA	5.776173285
VdnRY3_97278	1	1	238	254	uv|FJ750577.1:368-2560	1536	1520	Weak	Weak	Suspect[255,277];	TRUE_BIOLOGICAL	4447	1	Solanum pennellii chromosome ch08, complete genome	5.776173285
CLCdnRY12_91502	1	1	242	257	uv|KF719005.1:2205-5132	2378	2363	Weak	Weak	Suspect[258,277];	TRUE_BIOLOGICAL	3701	1		5.415162455
SdnRY1_86538	1	1	248	263	uv|KY031735.1:1-4680	1056	1071	Weak	Weak	Suspect[264,277];	TRUE_BIOLOGICAL	82115	1	Solanum pennellii chromosome ch05, complete genome	5.415162455
CLCdnRY1_41053	1	1	1	16	uv|DQ391279.1:1-10285	427	442	Weak	Weak	None	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum ARM REPEAT PROTEIN INTERACTING WITH ABF2-like (LOC102597434), transcript variant X3, misc_RNA	5.415162455
CLCdnRY1_51166	1	1	15	30	uv|KC702234.1:1-1022	546	531	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 4	5.415162455
CLCdnRY5_2510	1	1	16	31	uv|J02459.1:1-48502-49	31181	31196	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102605888), mRNA	5.415162455
CLCdnRY8_32206	1	1	14	29	uv|NGB00029.1:434-543	68	53	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum tuberosum CTL-like protein DDB_G0274487 (LOC102600459), transcript variant X2, mRNA	5.415162455
VdnRY3_117650	1	1	1	32	uv|JX069762.1:9774-9902-49	85	116	Strong	Strong	None	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum chlorophyll a-b binding protein CP29.1, chloroplastic-like (LOC102583949), mRNA	11.23188406
CLCdnRY9_51583	1	1	237	253	uv|V00604.2:1-6407-49	4606	4622	Weak	Weak	Suspect[254,276];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum purine permease 3-like (LOC102580805), mRNA	5.797101449
CLCdnRY11_85298	1	1	237	252	uv|DQ391279.1:1-10285	497	512	Weak	Weak	Suspect[253,276];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 19 (LOC102598651), transcript variant X3, mRNA	5.434782609
CLCdnRY11_35998	1	1	6	24	uv|KF718979.1:2206-6730	4309	4327	Moderate	Moderate	Suspect[1,5];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At5g63710 (LOC102604943), transcript variant X2, mRNA	6.545454545
VdnRY1_103692	1	1	235	252	uv|U73899.1:1-227	109	92	Weak	Weak	Suspect[253,275];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 50S ribosomal protein L34, chloroplastic (LOC102588229), transcript variant X1, mRNA	6.181818182
CLCdnRY11_55300	1	1	238	254	uv|J02459.1:1-48502-49	13151	13135	Weak	Weak	Suspect[255,275];	TRUE_BIOLOGICAL	10699	1	Uncultured bacterium clone CH_01B_000_Contig_8 genomic sequence	5.818181818
CLCdnRY12_27423	1	1	239	254	uv|AY753578.1:1-838	195	210	Weak	Weak	Suspect[255,275];	TRUE_BIOLOGICAL	6181	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 18 (LOC102595733), transcript variant X3, mRNA	5.454545455
CLCdnRY1_42023	1	1	256	271	uv|L09155.1:3742-3779-49	35	50	Weak	Weak	Suspect[272,275];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 12	5.454545455
CLCdnRY1_60017	1	1	6	21	uv|KF719005.1:2205-5132	2540	2555	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	3701	1		5.454545455
SdnRY1_86826	1	1	241	256	uv|U55760.1:1-2749	1421	1436	Weak	Weak	Suspect[257,275];	TRUE_BIOLOGICAL	558016	1		5.454545455
VdnRY2_12165	1	1	253	268	uv|M77169.1:820-5161	1365	1350	Weak	Weak	Suspect[269,275];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590743 (LOC102590743), mRNA	5.454545455
CLCdnRY10_66374	1	1	24	39	uv|U89936.1:1117-1464	99	84	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 12	5.454545455
CLCdnRY6_76917	1	1	240	255	uv|FJ380061.1:3470-3690	178	163	Weak	Weak	Suspect[256,275];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized protein HI_0077 (LOC102587360), transcript variant X1, mRNA	5.454545455
CLCdnRY11_79566	1	1	22	40	uv|JX573201.1:3249-3345	21	3	Moderate	Moderate	Suspect[1,21];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 10	6.569343066
CLCdnRY2_48602	1	1	2	17	uv|M35007.1:1-864	156	141	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	Solanum pennellii chromosome ch10, complete genome	5.474452555
CLCdnRY4_65420	1	1	24	39	uv|U89936.1:1117-1464	99	84	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 12	5.474452555
CLCdnRY5_75253	1	1	256	271	uv|AY217101.1:3918-4201	196	181	Weak	Weak	Suspect[272,274];	NO_DATA	1	1	PREDICTED: Solanum tuberosum MATH domain-containing protein At5g43560 (LOC102590534), transcript variant X2, mRNA	5.474452555
CLCdnRY7_11187	1	1	16	31	uv|KP057689.1:1-859	67	82	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	84111	1	Solanum tuberosum clone 075A11 calmodulin-like mRNA, complete cds	5.474452555
VdnRY1_111141	1	1	235	250	uv|KF853602.1:1019-2932	244	229	Weak	Weak	Suspect[251,274];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588917 (LOC102588917), mRNA	5.474452555
CLCdnRY1_56793	1	1	242	257	uv|U13869.1:2390-2731	103	118	Weak	Weak	Suspect[258,273];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum F-actin-capping protein subunit alpha-like (LOC102582084), mRNA	5.494505495
CLCdnRY10_9560	1	1	251	266	uv|DQ317694.1:4194-4289	59	74	Weak	Weak	Suspect[267,273];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 7	5.494505495
CLCdnRY12_21189	1	1	250	265	uv|DQ317695.1:1340-3572	1808	1793	Weak	Weak	Suspect[266,273];	TRUE_BIOLOGICAL	590	1	Solanum pennellii chromosome ch07, complete genome	5.494505495
CLCdnRY12_65387	1	1	254	269	uv|AF379854.1:3-2710	83	98	Weak	Weak	Suspect[270,273];	TRUE_BIOLOGICAL	5820	1	Solanum lycopersicum cultivar I-3 chromosome 4	5.494505495
CLCdnRY1_38594	1	1	237	252	uv|U42373.1:3885-3949	13	28	Weak	Weak	Suspect[253,273];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	5.494505495
CLCdnRY1_45469	1	1	238	253	uv|KF853601.1:1021-3588	323	308	Weak	Weak	Suspect[254,273];	TRUE_BIOLOGICAL	7711	1	Solanum tuberosum clone RH148O20, complete sequence	5.494505495
CLCdnRY6_66886	1	1	254	269	uv|AF379854.1:3-2710	83	98	Weak	Weak	Suspect[270,273];	TRUE_BIOLOGICAL	5820	1	Solanum lycopersicum cultivar I-3 chromosome 4	5.494505495
VdnRY1_203816	1	1	16	31	uv|X70481.1:3564-4492	597	612	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Nicotiana tabacum laccase-12-like (LOC107762661), mRNA	5.494505495
VdnRY4_50174	1	1	245	260	uv|LC121520.1:4008-4664	124	109	Weak	Weak	Suspect[261,273];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum axial regulator YABBY 5-like (LOC102578472), mRNA	5.494505495
CLCdnRY5_55008	1	1	240	261	uv|JN874481.1:57-2095	1754	1733	Weak	Weak	Suspect[262,272];	TRUE_BIOLOGICAL	86599	1	PREDICTED: Solanum tuberosum uncharacterized LOC102593566 (LOC102593566), transcript variant X18, ncRNA	7.720588235
CLCdnRY11_74606	1	1	18	34	uv|X53122.1:2456-2549	41	57	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062062 (LOC107062062), transcript variant X2, ncRNA	5.882352941
CLCdnRY12_49126	1	1	20	36	uv|J02459.1:1-48502-49	22952	22968	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum SRSF protein kinase 1-like (LOC102590044), transcript variant X2, mRNA	5.882352941
CLCdnRY1_54878	1	1	235	250	uv|KF718979.1:2206-6730	4228	4243	Weak	Weak	Suspect[251,272];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 2	5.514705882
CLCdnRY11_40356	1	1	13	28	uv|JX560397.1:83-5970	1884	1869	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum polyadenylate-binding protein 1-like (LOC102597580), transcript variant X6, misc_RNA	5.514705882
CLCdnRY7_47967	1	1	235	250	uv|KC702201.1:1-1023	884	899	Weak	Weak	Suspect[251,272];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 7	5.514705882
VdnRY1_77175	1	1	244	269	uv|JN874481.1:57-2095	919	892	Weak	Weak	Suspect[270,271];	TRUE_BIOLOGICAL	3705	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584187 (LOC102584187), mRNA	9.225092251
VdnRY4_5209	1	1	247	268	uv|KF718979.1:2206-6730	1190	1169	Weak	Weak	Suspect[269,271];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum calmodulin-binding protein 60 D-like (LOC102605248), mRNA	7.749077491
CLCdnRY10_82452	1	1	12	29	uv|KC702185.1:1-522	163	146	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598511 (LOC102598511), ncRNA	6.273062731
VdnRY2_9206	1	1	22	38	uv|M16217.1:1-2529	171	187	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum 40S ribosomal protein S27-3-like (LOC102587483), mRNA	5.904059041
VdnRY3_112856	1	1	245	261	uv|KF718979.1:2206-6730	3975	3991	Weak	Weak	Suspect[262,271];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum transcription factor bHLH93-like (LOC102597520), mRNA	5.904059041
CLCdnRY2_23720	1	1	247	263	uv|U47294.2:1-1774	128	144	Weak	Weak	Suspect[264,271];	TRUE_BIOLOGICAL	10508	1	PREDICTED: Solanum pennellii calcium-transporting ATPase, endoplasmic reticulum-type (LOC107003975), transcript variant X8, mRNA	5.904059041
CLCdnRY11_29402	1	1	234	249	uv|JX560397.1:83-5970	3850	3835	Weak	Weak	Suspect[250,271];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum cytochrome c oxidase subunit 6b-1-like (LOC102584243), mRNA	5.535055351
CLCdnRY12_34585	1	1	24	39	uv|KY031735.1:1-4680	4053	4068	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604434 (LOC102604434), transcript variant X3, misc_RNA	5.535055351
VdnRY6_7126	1	1	25	40	uv|KC702193.1:1-1136	991	976	Weak	Weak	Suspect[1,24];	TRUE_ARTIFICIAL	81077	81077	Solanum tuberosum chromosome 11 clone RH052D21, complete sequence	5.535055351
CLCdnRY11_41541	1	1	249	264	uv|L08862.1:2848-3728-49	436	421	Weak	Weak	Suspect[265,271];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107059741 (LOC107059741), ncRNA	5.535055351
CLCdnRY8_46182	1	1	14	29	uv|KY031734.1:6836-6942	47	32	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	91347	1		5.535055351
CLCdnRY8_46182	1	1	25	40	uv|L05669.1:1-1770	1535	1520	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	620	1		5.535055351
CLCdnRY10_52642	1	1	20	36	uv|NGB00051.1:1428-2848	1298	1314	Weak	Weak	Suspect[1,19];	NO_DATA	1	1		5.925925926
VdnRY3_29840	1	1	251	267	uv|AF379854.1:4263-5841	1469	1453	Weak	Weak	Suspect[268,270];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 00	5.925925926
CLCdnRY10_52642	1	1	26	41	uv|NGB00051.1:1428-2848	1298	1313	None	Weak	Suspect[1,19];	NO_DATA	1	1		5.555555556
CLCdnRY1_43467	1	1	14	29	uv|KY031734.1:6836-6942	47	32	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	91347	1		5.555555556
CLCdnRY1_43467	1	1	25	40	uv|L05669.1:1-1770	1535	1520	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	620	1		5.555555556
SdnRY1_87460	1	1	5	20	uv|X65279.1:5941-7353	320	335	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 7	5.555555556
VdnRY2_21311	1	1	17	32	uv|U13843.1:1887-9923	1254	1269	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum lycopersicum IRK-interacting protein (LOC101263443), transcript variant X3, mRNA	5.555555556
VdnRY5_40068	1	1	241	256	uv|JQ394800.1:4781-4893	21	6	Weak	Weak	Suspect[257,270];	NO_DATA	1	1	PREDICTED: Solanum tuberosum early endosome antigen 1 (LOC102595671), mRNA	5.555555556
CLCdnRY5_64276	1	1	245	260	uv|KF718978.1:2204-3575	1153	1168	Weak	Weak	Suspect[261,270];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum calcineurin B-like protein 1 (LOC102593315), mRNA	5.555555556
CLCdnRY9_70854	1	1	3	18	uv|NGB00587.1:1-3232	1184	1169	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	5.555555556
VdnRY3_29840	1	1	243	258	uv|U67875.1:8796-9922	486	501	Weak	Weak	Suspect[268,270];	TRUE_BIOLOGICAL	4895	1	Solanum lycopersicum cultivar I-3 chromosome 00	5.555555556
CLCdnRY11_41739	1	1	239	256	uv|M77169.1:820-5161	906	889	Weak	Weak	Suspect[257,269];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum 2-hydroxyisoflavanone dehydratase-like (LOC102601967), mRNA	6.319702602
CLCdnRY11_71952	1	1	13	29	uv|FJ750577.1:368-2560	1072	1056	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	4447	1	Solanum pennellii chromosome ch11, complete genome	5.94795539
CLCdnRY10_79895	1	1	3	19	uv|KC614689.1:4213-4921	384	368	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum ataxin-10-like (LOC102599694), transcript variant X4, mRNA	5.94795539
CLCdnRY10_41575	1	1	239	254	uv|J02400.1:1-5243-49	3927	3942	Weak	Weak	Suspect[255,269];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum F-box/kelch-repeat protein At3g23880-like (LOC102581998), transcript variant X4, mRNA	5.576208178
CLCdnRY11_23425	1	1	13	28	uv|AF379854.1:4263-5841	407	422	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized protein At5g50100, mitochondrial (LOC102586128), mRNA	5.576208178
CLCdnRY1_57869	1	1	232	247	uv|U03460.1:1729-1820	5	20	Weak	Weak	Suspect[248,269];	TRUE_BIOLOGICAL	620	1	Solanum pennellii chromosome ch10, complete genome	5.576208178
CLCdnRY11_44909	1	1	21	36	uv|KF853602.1:1019-2932	1473	1488	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600551 (LOC102600551), transcript variant X2, mRNA	5.597014925
CLCdnRY12_60506	1	1	11	26	uv|M34298.1:3143-4604	855	870	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	6237	1	Solanum lycopersicum cultivar I-3 chromosome 4	5.597014925
CLCdnRY12_64699	1	1	12	28	uv|JQ927446.1:4885-6835-49	1836	1820	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum alpha-amylase-like (LOC102598863), mRNA	5.992509363
CLCdnRY1_49739	1	1	233	249	uv|GU593055.1:13024-13902-49	817	833	Weak	Weak	Suspect[250,267];	TRUE_BIOLOGICAL	2093	1	Solanum lycopersicum cultivar I-3 chromosome 1	5.992509363
CLCdnRY1_16112	1	1	3	18	uv|KC702169.1:1-808	569	554	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101267414 (LOC101267414), transcript variant X1, mRNA	5.617977528
CLCdnRY1_40607	1	1	229	244	uv|KC614689.1:2135-2262	16	1	Weak	Weak	Suspect[245,267];	NO_DATA	1	1	PREDICTED: Solanum pennellii pentatricopeptide repeat-containing protein At1g09900 (LOC107028651), transcript variant X8, mRNA	5.617977528
SdnRY1_87796	1	1	243	258	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[259,267];	TRUE_BIOLOGICAL	10699	1	Solanum tuberosum clone 062G02 chlorophyll a-b binding protein 3C-like mRNA, complete cds	5.617977528
CLCdnRY11_79795	1	1	3	24	uv|NGB00587.1:1-3232	1564	1586	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	Solanum tuberosum chromosome 11 clone RH170D10, complete sequence	7.894736842
CLCdnRY11_46848	1	1	238	254	uv|KC702210.1:1-1022	59	43	Weak	Weak	Suspect[255,266];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum probable galactinol--sucrose galactosyltransferase 2 (LOC102596906), mRNA	6.015037594
CLCdnRY1_44380	1	1	233	248	uv|KF718979.1:2206-6730	419	404	Weak	Weak	Suspect[249,266];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 3	5.639097744
CLCdnRY2_46924	1	1	247	262	uv|KF853601.1:1021-3588	1228	1213	Weak	Weak	Suspect[263,266];	TRUE_BIOLOGICAL	7711	1		5.639097744
VdnRY4_33208	1	1	247	262	uv|M16217.1:1-2529	1270	1285	Weak	Weak	Suspect[263,266];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum lipoxygenase homology domain-containing protein 1-like (LOC102590334), mRNA	5.639097744
CLCdnRY11_55701	1	1	17	32	uv|AF237704.1:5192-5677	376	361	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	PREDICTED: Solanum tuberosum proteasome subunit beta type-5-like (LOC102600772), transcript variant X2, mRNA	5.639097744
CLCdnRY9_60937	1	1	23	38	uv|J02459.1:1-48502-49	40578	40593	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	10699	1	Solanum tuberosum clone RH017O12, complete sequence	5.639097744
VdnRY1_52036	1	1	244	261	uv|JF909482.1:3850-8059	532	549	Weak	Weak	Suspect[262,265];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598972 (LOC102598972), transcript variant X3, mRNA	6.41509434
VdnRY3_49416	1	1	232	248	uv|M16192.1:1-2517-49	291	275	Weak	Weak	Suspect[249,265];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein chromatin remodeling 35-like (LOC102588195), mRNA	6.037735849
VdnRY1_165075	1	1	235	251	uv|L05669.1:7406-7834	44	28	Weak	Weak	Suspect[252,265];	TRUE_BIOLOGICAL	10699	1	Solanum demissum chromosome 11 clone PGEC561, complete sequence	6.037735849
CLCdnRY2_42017	1	1	15	30	uv|KY031735.1:1-4680	4340	4355	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	82115	1	Solanum lycopersicum cultivar I-3 chromosome 11	5.660377358
CLCdnRY3_52711	1	1	246	261	uv|U29899.1:4697-5948	685	670	Weak	Weak	Suspect[262,265];	TRUE_BIOLOGICAL	4892	1	Solanum lycopersicum cultivar I-3 chromosome 1	5.660377358
CLCdnRY8_62746	1	1	21	36	uv|JN900237.1:1151-3072-49	952	937	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	5.660377358
VdnRY6_13377	1	1	246	261	uv|KC702178.1:1-2022	1925	1940	Weak	Weak	Suspect[262,265];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum dephospho-CoA kinase-like (LOC102587364), transcript variant X7, mRNA	5.660377358
VdnRY6_39602	1	1	234	249	uv|Z46234.1:664-3443	171	156	Weak	Weak	Suspect[250,265];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized LOC102595928 (LOC102595928), transcript variant X6, ncRNA	5.660377358
CLCdnRY3_36814	1	1	228	244	uv|KC702165.1:1-1023	124	140	Weak	Weak	Suspect[245,264];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum (S)-N-methylcoclaurine 3'-hydroxylase-like protein (LOC102582415), mRNA	6.060606061
VdnRY7_22848	1	1	25	40	uv|AY390769.1:1-1000	68	83	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum sodium/pyruvate cotransporter BASS2, chloroplastic (LOC102605368), mRNA	5.681818182
CLCdnRY1_47826	1	1	17	32	uv|L08862.1:2848-3728-49	188	173	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum ATP-dependent RNA helicase DHX36 (LOC102592008), mRNA	5.681818182
CLCdnRY6_46189	1	1	233	248	uv|KC702187.1:1-1023	166	151	Weak	Weak	Suspect[249,264];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii craniofacial development protein 1 (LOC107018252), transcript variant X2, mRNA	5.681818182
VdnRY2_54133	1	1	240	255	uv|J02459.1:1-48502-49	22969	22984	Weak	Weak	Suspect[256,264];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum vacuolar protein sorting-associated protein 28 homolog 2 (LOC102587158), transcript variant X3, mRNA	5.681818182
CLCdnRY12_48170	1	1	191	243	uv|KF719004.1:2204-2946	113	61	Strong	Strong	Suspect[244,263];	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA	19.77186312
CLCdnRY12_84684	1	1	11	29	uv|X70481.1:3564-4492	326	308	Moderate	Moderate	Suspect[1,10];	TRUE_BIOLOGICAL	4930	1		6.844106464
CLCdnRY2_50838	1	1	3	20	uv|JF909482.1:3850-8059	549	532	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598972 (LOC102598972), transcript variant X3, mRNA	6.463878327
CLCdnRY7_53747	1	1	3	20	uv|JF909482.1:3850-8059	549	532	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598972 (LOC102598972), transcript variant X3, mRNA	6.463878327
VdnRY1_65155	1	1	239	255	uv|JF909463.1:3985-4064	64	48	Weak	Weak	Suspect[256,263];	NO_DATA	1	1	Solanum lycopersicum chromosome ch03, complete genome	6.08365019
VdnRY1_113330	1	1	224	240	uv|KM407512.1:886-4985	2534	2518	Weak	Weak	Suspect[241,263];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum ubiquitin carboxyl-terminal hydrolase 20-like (LOC102598296), mRNA	6.08365019
CLCdnRY11_78423	1	1	243	258	uv|KF718989.1:2199-3181	110	125	Weak	Weak	Suspect[259,263];	TRUE_BIOLOGICAL	3700	1	PREDICTED: Solanum tuberosum cleavage and polyadenylation specificity factor subunit 6 (LOC102583609), transcript variant X3, mRNA	5.703422053
CLCdnRY12_93166	1	1	23	38	uv|AF379854.1:3-2710	1527	1512	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 7	5.703422053
VdnRY3_25530	1	1	23	38	uv|JN874481.1:57-2095	148	163	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	3705	1	PREDICTED: Solanum tuberosum heterogeneous nuclear ribonucleoprotein 1-like (LOC102604973), transcript variant X2, mRNA	5.703422053
CLCdnRY2_11884	1	1	239	254	uv|U43284.1:719-867	30	45	Weak	Weak	Suspect[255,263];	TRUE_BIOLOGICAL	11646	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587732 (LOC102587732), mRNA	5.703422053
CLCdnRY2_41811	1	1	1	16	uv|KM407506.1:2354-4632	1012	997	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like (LOC102579611), transcript variant X6, mRNA	5.703422053
VdnRY1_158954	1	1	19	34	uv|U30497.1:3230-4814	1317	1302	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch07, complete genome	5.703422053
VdnRY3_15666	1	1	6	21	uv|U67875.1:6835-8216	760	745	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	4895	1	Solanum lycopersicum cultivar I-3 chromosome 2	5.703422053
CLCdnRY12_61284	1	1	222	238	uv|AY962893.1:2004-2563	175	191	Weak	Weak	Suspect[239,262];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum lycopersicum pentatricopeptide repeat-containing protein At2g16880 (LOC104645441), transcript variant X4, mRNA	6.106870229
SdnRY1_88589	1	1	246	262	uv|AF379854.1:4263-5841	589	573	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1		6.106870229
CLCdnRY5_52732	1	1	23	39	uv|AF379854.1:4263-5841	888	904	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum F-box protein PP2-A13-like (LOC102581488), mRNA	6.106870229
CLCdnRY6_40666	1	1	9	25	uv|NGB00055.1:1-1950	1185	1201	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum transcription factor TCP4 (LOC102593018), mRNA	6.106870229
CLCdnRY1_27353	1	1	7	22	uv|JF909482.1:3850-8059	2345	2360	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum probable inactive purple acid phosphatase 1 (LOC102584747), transcript variant X2, mRNA	5.72519084
VdnRY1_39851	1	1	228	243	uv|U29899.1:4697-5948	440	455	Weak	Weak	Suspect[244,262];	TRUE_BIOLOGICAL	4892	1		5.72519084
VdnRY4_29594	1	1	226	241	uv|KF853602.1:1019-2932	244	229	Weak	Weak	Suspect[242,262];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588917 (LOC102588917), mRNA	5.72519084
VdnRY4_59072	1	1	243	258	uv|FJ160466.1:1899-7260-49	5166	5181	Weak	Weak	Suspect[259,262];	NO_DATA	1	1	Bordetella trematum strain F581 chromosome, complete genome	5.72519084
CLCdnRY10_86006	1	1	228	243	uv|KM407512.1:886-4985	282	297	Weak	Weak	Suspect[244,262];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061363 (LOC107061363), ncRNA	5.72519084
CLCdnRY3_19839	1	1	6	21	uv|AF379854.1:3-2710	1412	1427	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum cytochrome P450 76A2 (LOC102594703), mRNA	5.72519084
CLCdnRY6_64704	1	1	21	36	uv|U67875.1:18-1316	1083	1068	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 (LOC102586297), mRNA	5.72519084
CLCdnRY12_75814	1	1	15	31	uv|JQ927446.1:4885-6835-49	1492	1508	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	Solanum demissum chromosome 5 clone PGEC132D05, complete sequence	6.130268199
VdnRY1_34961	1	1	234	250	uv|JQ394800.1:1-122	55	39	Weak	Weak	Suspect[251,261];	TRUE_BIOLOGICAL	620	1	Solanum pennellii chromosome ch04, complete genome	6.130268199
CLCdnRY10_15019	1	1	226	241	uv|JN874480.1:1050-2714	942	927	Weak	Weak	Suspect[242,261];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch12, complete genome	5.747126437
CLCdnRY11_80745	1	1	234	249	uv|M98046.1:4411-4509	64	79	Weak	Weak	Suspect[250,261];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch02, complete genome	5.747126437
CLCdnRY5_27262	1	1	244	259	uv|KF719006.1:2204-2928	451	466	Weak	Weak	Suspect[260,261];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum nifU-like protein 4, mitochondrial (LOC102600428), mRNA	5.747126437
CLCdnRY10_55674	1	1	232	247	uv|X70481.1:3564-4492	750	735	Weak	Weak	Suspect[248,261];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102594742 (LOC102594742), mRNA	5.747126437
CLCdnRY4_50865	1	1	232	247	uv|AY568055.1:6692-7837	557	542	Weak	Weak	Suspect[248,261];	NO_DATA	1	1	PREDICTED: Solanum tuberosum PHD finger protein At1g33420 (LOC102593406), mRNA	5.747126437
CLCdnRY5_53213	1	1	10	25	uv|M34298.1:3143-4604	1119	1134	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum pennellii uncharacterized LOC107003537 (LOC107003537), transcript variant X5, mRNA	5.747126437
VdnRY3_5976	1	1	224	239	uv|JQ927446.1:4885-6835-49	1659	1674	Weak	Weak	Suspect[240,261];	NO_DATA	1	1	PREDICTED: Solanum tuberosum reticulon-4-interacting protein 1, mitochondrial (LOC102581800), mRNA	5.747126437
VdnRY6_22882	1	1	239	254	uv|JQ437372.1:54-235	105	120	Weak	Weak	Suspect[255,261];	TRUE_BIOLOGICAL	40674	1	PREDICTED: Solanum tuberosum eukaryotic translation initiation factor 5B-like (LOC102598850), mRNA	5.747126437
CLCdnRY9_67225	1	1	25	42	uv|GU593054.1:1-1305	980	963	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch07, complete genome	6.538461538
VdnRY3_6646	1	1	4	21	uv|M77169.1:820-5161	889	906	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum 2-hydroxyisoflavanone dehydratase-like (LOC102601967), mRNA	6.538461538
VdnRY4_74867	1	1	229	246	uv|AY529716.1:752-854	60	77	Weak	Weak	Suspect[247,260];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 10 (LOC102581049), mRNA	6.538461538
CLCdnRY3_57804	1	1	2	18	uv|X51450.1:2521-3852	153	137	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum putative F-box protein At3g10240 (LOC107059603), mRNA	6.153846154
SdnRY1_88825	1	1	14	29	uv|L08860.1:1-1129	1011	996	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC107059938 (LOC107059938), transcript variant X3, ncRNA	5.769230769
CLCdnRY11_29846	1	1	244	259	uv|L08860.1:1-1129	220	205	Weak	Weak	Suspect[260,260];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum lipid phosphate phosphatase epsilon 2, chloroplastic-like (LOC102589941), mRNA	5.769230769
CLCdnRY3_60769	1	1	7	22	uv|HM640258.1:3527-5744	710	725	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	5052	1		5.769230769
VdnRY5_26144	1	1	227	242	uv|DQ883689.3:1-1994	1607	1592	Weak	Weak	Suspect[243,260];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 5	5.769230769
CLCdnRY7_53300	1	1	4	30	uv|AF379854.1:3-2710	2167	2141	Moderate	Moderate	Suspect[1,3];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum B3 domain-containing transcription factor NGA3-like (LOC102603967), mRNA	10.03861004
VdnRY1_23529	1	1	218	236	uv|AY217101.1:3918-4201	215	197	Moderate	Moderate	Suspect[237,259];	NO_DATA	1	1		6.94980695
SdnRY1_88935	1	1	227	243	uv|AF310136.1:4127-5198	1037	1021	Weak	Weak	Suspect[248,259];	TRUE_BIOLOGICAL	620	1	Solanum pennellii chromosome ch04, complete genome	6.177606178
CLCdnRY11_90518	1	1	233	248	uv|NGB00587.1:1-3232	2041	2056	Weak	Weak	Suspect[249,259];	TRUE_BIOLOGICAL	1279	1		5.791505792
CLCdnRY1_50201	1	1	221	236	uv|U02436.1:3152-4436	646	631	Weak	Weak	Suspect[237,259];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch03, complete genome	5.791505792
SdnRY1_88935	1	1	232	247	uv|AF379854.1:4263-5841	1188	1173	Weak	Weak	Suspect[248,259];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	5.791505792
VdnRY3_40448	1	1	25	40	uv|KC702188.1:1-274	73	58	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch08, complete genome	5.791505792
CLCdnRY6_69335	1	1	15	30	uv|JX560397.1:83-5970	5413	5398	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	29487	1	Solanum lycopersicum cDNA, clone: LEFL1012CB01, HTC in leaf	5.791505792
CLCdnRY6_70082	1	1	219	237	uv|AF379854.1:3-2710	606	624	Moderate	Moderate	Suspect[238,258];	TRUE_BIOLOGICAL	5820	1	Solanum demissum chromosome 5 clone PGEC979H09, complete sequence	6.976744186
VdnRY4_45637	1	1	6	22	uv|AY962893.1:8266-9065	155	171	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	29487	1	T.aequale 28S rRNA gene and ITS2 DNA	6.201550388
VdnRY1_131884	1	1	5	21	uv|J02459.1:1-48502-49	14304	14320	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum RNA-binding protein 38 (LOC102584346), mRNA	6.201550388
CLCdnRY10_22424	1	1	241	256	uv|JX025643.1:1-2941	2726	2711	Weak	Weak	Suspect[257,258];	NO_DATA	1	1	PREDICTED: Solanum tuberosum phosphoenolpyruvate carboxykinase [ATP]-like (LOC102596191), mRNA	5.813953488
CLCdnRY10_38447	1	1	18	33	uv|JX559783.1:1162-1384	52	67	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum proline--tRNA ligase, chloroplastic/mitochondrial (LOC102597850), mRNA	5.813953488
CLCdnRY10_73333	1	1	14	29	uv|DQ883671.3:1-992	495	510	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum UPF0307 protein AZOSEA05410 (LOC101264926), transcript variant X2, mRNA	5.813953488
CLCdnRY1_9465	1	1	3	18	uv|KC702169.1:1-808	569	554	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC102603860 (LOC102603860), transcript variant X2, mRNA	5.813953488
CLCdnRY4_36326	1	1	229	244	uv|AY423865.1:2659-2760	52	67	Weak	Weak	Suspect[245,258];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein MOR1 (LOC102605395), transcript variant X2, mRNA	5.813953488
CLCdnRY4_49339	1	1	229	244	uv|AY423865.1:2659-2760	52	67	Weak	Weak	Suspect[245,258];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein MOR1 (LOC102605395), transcript variant X2, mRNA	5.813953488
CLCdnRY8_44293	1	1	3	18	uv|KF718979.1:2206-6730	592	577	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum putative disease resistance protein At3g14460 (LOC107063531), mRNA	5.813953488
CLCdnRY2_50410	1	1	2	28	uv|AF379854.1:3-2710	2167	2141	Moderate	Moderate	Suspect[1,1];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch08, complete genome	10.11673152
VdnRY1_120668	1	1	13	31	uv|KC702207.1:1-1143	719	737	Moderate	Moderate	Suspect[1,12];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum uncharacterized LOC107059945 (LOC107059945), ncRNA	7.003891051
VdnRY1_149692	1	1	5	21	uv|J02459.1:1-48502-49	12012	12028	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum molybdenum cofactor sulfurase-like (LOC102592383), mRNA	6.225680934
VdnRY1_80769	1	1	8	23	uv|U67875.1:6278-6481	129	114	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum ubiquitin carboxyl-terminal hydrolase 17 (LOC102606234), mRNA	5.836575875
VdnRY1_119523	1	1	228	256	uv|NGB01023.1:946-1024	45	73	Moderate	Moderate	None	TRUE_BIOLOGICAL	2759	1	Solanum pennellii chromosome ch10, complete genome	10.9375
CLCdnRY6_84827	1	1	224	239	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[240,256];	TRUE_BIOLOGICAL	10699	1	Solanum tuberosum chlorophyll a-b binding protein 3C, chloroplastic-like (LOC102603980), mRNA<>Solanum tuberosum clone St-TNT24 chlorophyll a-b binding protein 3C-like mRNA mRNA, complete cds	5.859375
CLCdnRY7_5840	1	1	23	38	uv|JF909482.1:3850-8059	3523	3538	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum UDP-D-apiose/UDP-D-xylose synthase 2 (LOC102587281), mRNA	5.859375
VdnRY1_128200	1	1	235	250	uv|DQ917670.1:4-137	79	64	Weak	Weak	Suspect[251,256];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 5	5.859375
VdnRY3_42053	1	1	228	249	uv|FJ380061.1:3772-3921	57	78	Weak	Weak	Suspect[250,255];	TRUE_BIOLOGICAL	122277	1	PREDICTED: Solanum tuberosum alpha-L-fucosidase 1-like (LOC102600482), mRNA	8.235294118
CLCdnRY3_61079	1	1	1	18	uv|JN874481.1:20319-20375	5	22	Weak	Weak	Suspect[242,255];	NO_DATA	1	1	Solanum pennellii chromosome ch09, complete genome	6.666666667
CLCdnRY3_61079	1	1	225	241	uv|NGB00118.1:1-154	24	40	Weak	Weak	Suspect[242,255];	NO_DATA	1	1	Solanum pennellii chromosome ch09, complete genome	6.274509804
CLCdnRY10_17797	1	1	235	250	uv|NGB00051.1:1428-2848	771	786	Weak	Weak	Suspect[251,255];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579594 (LOC102579594), transcript variant X2, mRNA	5.882352941
CLCdnRY10_79804	1	1	25	40	uv|U89960.1:4738-7717	2350	2365	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	4892	1	Solanum lycopersicum cultivar I-3 chromosome 2	5.882352941
CLCdnRY10_83250	1	1	1	254	uv|EF437940.1:2628-3510	76	329	Strong	Strong	None	TRUE_BIOLOGICAL	91347	1	Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CFSAN067217 plasmid pSC-31-2, complete sequence	99.60629921
CLCdnRY3_63876	1	1	6	23	uv|GQ160907.1:3415-3540	69	52	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	4930	1	Mucor circinelloides f. lusitanicus strain CBS 277.49 mitochondrion, complete genome	6.692913386
CLCdnRY12_44206	1	1	233	248	uv|AF327711.1:665-1379	85	70	Weak	Weak	Suspect[249,254];	NO_DATA	1	1	PREDICTED: Solanum tuberosum bifunctional riboflavin kinase/FMN phosphatase (LOC102593343), transcript variant X2, mRNA	5.905511811
CLCdnRY5_48800	1	1	232	247	uv|KY031733.1:1-4952	3269	3284	Weak	Weak	Suspect[248,254];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum histidinol-phosphate aminotransferase, chloroplastic (LOC102597587), transcript variant X1, mRNA	5.905511811
CLCdnRY3_22985	1	1	219	234	uv|KY031734.1:8746-8759-49	55	40	Weak	Weak	Suspect[235,254];	NO_DATA	1	1	PREDICTED: Solanum tuberosum clathrin light chain 1-like (LOC102604022), mRNA	5.905511811
CLCdnRY10_39235	1	1	5	23	uv|U13189.1:13856-14470	61	79	Moderate	Moderate	Suspect[1,4];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061657 (LOC107061657), ncRNA	7.114624506
VdnRY3_12409	1	1	231	249	uv|U13189.1:13856-14470	79	61	Moderate	Moderate	Suspect[250,253];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061657 (LOC107061657), ncRNA	7.114624506
CLCdnRY12_83552	1	1	22	39	uv|JF909482.1:3850-8059	1609	1592	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum probable serine/threonine-protein kinase At5g41260 (LOC102585985), mRNA	6.719367589
VdnRY3_83096	1	1	236	252	uv|AF078810.1:1409-1662	175	159	Weak	Weak	Suspect[253,253];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum uncharacterized LOC104648056 (LOC104648056), mRNA	6.324110672
VdnRY1_92131	1	1	217	232	uv|KC702183.1:1-1023	255	240	Weak	Weak	Suspect[233,253];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch03, complete genome	5.928853755
VdnRY1_122096	1	1	232	247	uv|U13188.1:5438-5534	52	67	Weak	Weak	Suspect[248,253];	NO_DATA	1	1	Solanum tuberosum clone BAC BC211I8 sequence	5.928853755
VdnRY2_142058	1	1	231	246	uv|JX560334.1:1968-3342	1119	1104	Weak	Weak	Suspect[247,253];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 6 (LOC102585731), mRNA	5.928853755
CLCdnRY4_37080	1	1	21	36	uv|U67875.1:18-1316	1083	1068	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 (LOC102586297), mRNA	5.928853755
CLCdnRY9_51742	1	1	10	25	uv|M77169.1:820-5161	376	361	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum pennellii uncharacterized LOC107004516 (LOC107004516), transcript variant X2, misc_RNA	5.928853755
VdnRY2_80105	1	1	220	235	uv|AF379854.1:4263-5841	672	687	Weak	Weak	Suspect[236,253];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum protein SSUH2 homolog (LOC102587461), transcript variant X3, mRNA	5.928853755
VdnRY2_130612	1	1	12	27	uv|DQ883669.3:1-844	238	253	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062479 (LOC107062479), ncRNA	5.928853755
CLCdnRY10_45609	1	1	2	23	uv|X75460.1:3219-3445	124	145	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At1g06840 (LOC102590722), transcript variant X2, mRNA	8.333333333
VdnRY2_40699	1	1	9	26	uv|KC702209.1:1-2022	518	535	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	196118	1	Solanum tuberosum chromosome 7 clone RHPOTKEY032K01, complete sequence	6.746031746
VdnRY7_21005	1	1	5	22	uv|LC029925.1:8660-9553	630	647	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable E3 ubiquitin-protein ligase XERICO (LOC102579789), transcript variant X1, mRNA	6.746031746
CLCdnRY12_31919	1	1	7	22	uv|M77169.1:820-5161	581	596	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	1485	1		5.952380952
CLCdnRY12_52562	1	1	236	251	uv|JF909482.1:3850-8059	321	336	Weak	Weak	Suspect[252,252];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch04, complete genome	5.952380952
CLCdnRY1_59980	1	1	235	250	uv|NGB00412.1:1-1359	609	624	Weak	Weak	Suspect[251,252];	NO_DATA	1	1		5.952380952
CLCdnRY2_33863	1	1	24	39	uv|AF379854.1:3-2710	554	539	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599985 (LOC102599985), transcript variant X2, mRNA	5.952380952
CLCdnRY11_66751	1	1	22	37	uv|X70271.1:1034-1130	58	73	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch10, complete genome	5.952380952
CLCdnRY1_40203	1	1	7	22	uv|GU593054.1:6136-8806	2237	2252	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum TMV resistance protein N-like (LOC107059211), mRNA	5.952380952
CLCdnRY4_55608	1	1	25	40	uv|J02459.1:1-48502-49	29819	29804	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	10699	1	Lycopersicon esculentum clone 134142F, mRNA sequence	5.952380952
CLCdnRY7_12134	1	1	231	246	uv|DQ391279.1:11528-12003	206	221	Weak	Weak	Suspect[247,252];	NO_DATA	1	1	PREDICTED: Solanum tuberosum anthocyanin 5-aromatic acyltransferase-like (LOC102592740), misc_RNA	5.952380952
SdnRY1_90079	1	1	4	19	uv|EF442786.1:5501-5600	65	50	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	Solanum pennellii chromosome ch09, complete genome	5.952380952
VdnRY1_120381	1	1	216	231	uv|M16192.1:1-2517-49	1070	1085	Weak	Weak	Suspect[232,252];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum caffeoyl-CoA O-methyltransferase 6-like (LOC102592869), mRNA	5.952380952
VdnRY2_7629	1	1	223	238	uv|U30497.1:3230-4814	577	592	Weak	Weak	Suspect[239,252];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	5.952380952
VdnRY6_44335	1	1	3	21	uv|U47120.2:791-908	50	68	Moderate	Moderate	Suspect[1,2];	NO_DATA	1	1	Phenacoccus solenopsis 28S ribosomal RNA gene, partial sequence	7.171314741
CLCdnRY11_67627	1	1	232	249	uv|NGB00404.1:2704-2843-49	119	136	Weak	Weak	Suspect[250,251];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107059118 (LOC107059118), ncRNA	6.772908367
CLCdnRY10_69212	1	1	1	17	uv|AF379854.1:3-2710	1300	1284	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	Solanum lycopersicum chromosome ch05, complete genome	6.374501992
VdnRY3_25911	1	1	224	240	uv|M16217.1:1-2529	2177	2193	Weak	Weak	Suspect[241,251];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum outer envelope membrane protein 7-like (LOC102601376), mRNA	6.374501992
CLCdnRY1_53388	1	1	11	26	uv|AY568055.1:6692-7837	175	190	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604289 (LOC102604289), transcript variant X1, mRNA	5.976095618
CLCdnRY12_11417	1	1	219	234	uv|U67875.1:6835-8216	283	268	Weak	Weak	Suspect[235,251];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum DNA-binding protein RHL1 (LOC102598969), transcript variant X2, mRNA	5.976095618
VdnRY2_111667	1	1	215	230	uv|EU496100.1:270-2269	582	567	Weak	Weak	Suspect[231,251];	NO_DATA	1	1		5.976095618
CLCdnRY10_83902	1	1	40	70	uv|NGB00733.1:1-51	1	31	Strong	Strong	Suspect[1,39];	TRUE_ARTIFICIAL	81077	81077	Ralstonia solanacearum genome assembly 9 genomes, chromosome : VII	12
SdnRY1_90381	1	1	208	227	uv|M77169.1:820-5161	1834	1853	Moderate	Moderate	Suspect[228,250];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592917 (LOC102592917), transcript variant X5, ncRNA	7.6
CLCdnRY10_82963	1	1	15	31	uv|KC503967.1:3363-4043-40	360	344	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	620	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.4
CLCdnRY4_68439	1	1	226	242	uv|JX310867.1:868-3760	2149	2133	Weak	Weak	Suspect[243,250];	TRUE_BIOLOGICAL	1224	1	PREDICTED: Solanum tuberosum putative UPF0481 protein At3g02645 (LOC102595278), mRNA	6.4
VdnRY4_37217	1	1	230	246	uv|M77169.1:820-5161	2106	2122	Weak	Weak	Suspect[247,250];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum catalase isozyme 2 (LOC102577720), mRNA	6.4
CLCdnRY1_38032	1	1	17	33	uv|JX310867.1:868-3760	2501	2485	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	1224	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602815 (LOC102602815), transcript variant X3, mRNA	6.4
CLCdnRY10_82360	1	1	18	33	uv|L11060.1:23-714	337	352	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch11, complete genome	6
CLCdnRY11_50088	1	1	214	229	uv|KC702183.1:1-1023	868	853	Weak	Weak	Suspect[230,250];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum ubiquitin-like-specific protease 1D (LOC102597295), transcript variant X4, mRNA	6
CLCdnRY1_60119	1	1	231	246	uv|KF718979.1:2206-6730	242	227	Weak	Weak	Suspect[247,250];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 8	6
VdnRY2_15540	1	1	229	244	uv|KC702214.1:1-1136	1039	1054	Weak	Weak	Suspect[245,250];	TRUE_ARTIFICIAL	81077	81077	Sphingomonas sp. SL9 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	6
CLCdnRY3_59318	1	1	219	234	uv|D10357.1:253-396	130	115	Weak	Weak	Suspect[235,250];	TRUE_BIOLOGICAL	558016	1	Solanum lycopersicum cultivar I-3 chromosome 1	6
VdnRY1_184114	1	1	217	232	uv|KY031724.1:6080-6185	101	86	Weak	Weak	Suspect[233,250];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102594712 (LOC102594712), transcript variant X2, mRNA	6
VdnRY2_36540	1	1	8	23	uv|U13843.1:1887-9923	3926	3941	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	325454	1	Solanum pennellii chromosome ch05, complete genome	6
VdnRY1_73218	1	1	195	212	uv|J02459.1:1-48502-49	46812	46795	None	Weak	Suspect[230,249];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch12, complete genome	6.827309237
CLCdnRY2_60598	1	1	24	40	uv|M77169.1:820-5161	2269	2253	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	1485	1	Solanum tuberosum chromosome 7 clone RHPOTKEY169K08, complete sequence	6.425702811
CLCdnRY5_43560	1	1	212	228	uv|U03498.1:4889-5243	320	304	Weak	Weak	Suspect[229,249];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch06, complete genome	6.425702811
VdnRY1_73218	1	1	213	229	uv|FJ931533.1:7978-12753-49	4680	4696	Weak	Weak	Suspect[230,249];	TRUE_BIOLOGICAL	7215	1	Solanum pennellii chromosome ch12, complete genome	6.425702811
CLCdnRY7_63798	1	1	24	40	uv|M77169.1:820-5161	2269	2253	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	1485	1	Solanum tuberosum chromosome 7 clone RHPOTKEY169K08, complete sequence	6.425702811
VdnRY4_38115	1	1	221	237	uv|JN581374.1:616-2149	293	309	Weak	Weak	Suspect[238,249];	TRUE_BIOLOGICAL	4930	1		6.425702811
CLCdnRY6_76410	1	1	234	249	uv|KM407510.1:737-1318	3	18	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102588139 (LOC102588139), mRNA	6.024096386
SdnRY1_90516	1	1	4	19	uv|AY962893.1:2004-2563	327	342	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	29487	1		6.024096386
CLCdnRY12_62482	1	1	234	249	uv|AF379854.1:3-2710	695	710	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.024096386
VdnRY1_35762	1	1	213	228	uv|KF719005.1:2205-5132	1215	1230	Weak	Weak	Suspect[229,249];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589708 (LOC102589708), mRNA	6.024096386
CLCdnRY12_64528	1	1	226	243	uv|HM640258.1:3527-5744	149	132	Weak	Weak	Suspect[244,248];	TRUE_BIOLOGICAL	5052	1	PREDICTED: Solanum tuberosum protein RER1B-like (LOC102601257), mRNA	6.85483871
CLCdnRY3_62469	1	1	25	41	uv|J02459.1:1-48502-49	31176	31192	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	10699	1	Solanum lycopersicum cultivar I-3 chromosome 4	6.451612903
VdnRY4_4013	1	1	211	227	uv|LC121520.1:2705-3093	324	308	Weak	Weak	Suspect[228,248];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.451612903
VdnRY1_104084	1	1	222	238	uv|AY753578.1:1-838	134	150	Weak	Weak	Suspect[239,248];	TRUE_BIOLOGICAL	6181	1	Solanum tuberosum chromosome 11 clone RH186L12, complete sequence	6.451612903
VdnRY6_30715	1	1	217	233	uv|KF719005.1:2205-5132	1240	1256	Weak	Weak	Suspect[234,248];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum cytochrome P450 98A3-like (LOC102578406), transcript variant X3, mRNA	6.451612903
CLCdnRY10_38495	1	1	9	24	uv|LC121524.1:2980-3796	287	272	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	Solanum pennellii chromosome ch03, complete genome	6.048387097
SdnRY1_90650	1	1	226	241	uv|JX025643.1:1-2941	1060	1045	Weak	Weak	Suspect[242,248];	NO_DATA	1	1	Solanum pennellii chromosome ch05, complete genome	6.048387097
SdnRY1_90674	1	1	215	230	uv|JN204885.1:1-763	414	429	Weak	Weak	Suspect[231,248];	NO_DATA	1	1	PREDICTED: Solanum tuberosum lysine-specific demethylase JMJ25 (LOC102601383), mRNA	6.048387097
CLCdnRY10_53996	1	1	23	38	uv|KP126802.1:8623-13621-38	4031	4046	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum uncharacterized membrane protein At1g16860-like (LOC102582608), transcript variant X3, mRNA	6.048387097
CLCdnRY6_22068	1	1	207	224	uv|EU186086.1:9349-10480-30	167	150	Weak	Weak	Suspect[225,247];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cytochrome P450 711A1 (LOC102593258), mRNA	6.882591093
CLCdnRY10_57309	1	1	9	25	uv|L08860.1:1858-2910-49	1101	1085	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch09, complete genome	6.477732794
CLCdnRY5_66932	1	1	216	232	uv|L08862.1:1-2039	1491	1507	Weak	Weak	Suspect[233,247];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum protein DETOXIFICATION 40-like (LOC102593891), transcript variant X1, mRNA	6.477732794
CLCdnRY2_61970	1	1	217	232	uv|NGB00358.1:6499-6597	36	21	Weak	Weak	Suspect[233,247];	NO_DATA	1	1	Solanum pennellii chromosome ch06, complete genome	6.072874494
CLCdnRY11_78067	1	1	20	35	uv|KF680545.1:1-2837	1538	1553	Weak	Weak	Suspect[1,19];	NO_DATA	1	1		6.072874494
CLCdnRY12_59284	1	1	14	29	uv|M77169.1:820-5161	307	292	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	1485	1	Solanum pennellii chromosome ch12, complete genome	6.072874494
CLCdnRY6_71890	1	1	224	239	uv|KC702170.1:1-1957	502	487	Weak	Weak	Suspect[240,247];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061821 (LOC107061821), ncRNA	6.072874494
SdnRY1_90907	1	1	219	234	uv|JQ394802.1:2993-3095	41	26	Weak	Weak	Suspect[235,247];	TRUE_BIOLOGICAL	620	1	Solanum tuberosum chromosome 11 clone RH170D10, complete sequence	6.072874494
CLCdnRY2_63886	1	1	8	24	uv|GU593055.1:13024-13902-49	364	380	Weak	Weak	Suspect[1,7];	NO_DATA	1	1		6.504065041
CLCdnRY3_29940	1	1	225	241	uv|L08862.1:2848-3728-49	508	492	Weak	Weak	Suspect[242,246];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 (LOC102597227), mRNA	6.504065041
CLCdnRY10_32483	1	1	215	230	uv|GU593054.1:6136-8806	781	766	Weak	Weak	Suspect[231,246];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 12	6.097560976
CLCdnRY4_64453	1	1	211	226	uv|JQ927446.1:4885-6835-49	250	235	Weak	Weak	Suspect[227,246];	NO_DATA	1	1	PREDICTED: Solanum tuberosum rsm22-cox11 tandem protein 2, mitochondrial (LOC102596621), mRNA	6.097560976
CLCdnRY8_39599	1	1	226	241	uv|JN581374.1:3097-3496	138	123	Weak	Weak	Suspect[242,246];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum U-box domain-containing protein 44-like (LOC102584351), transcript variant X3, mRNA	6.097560976
VdnRY4_64736	1	1	217	232	uv|L05669.1:5948-6104	109	124	Weak	Weak	Suspect[233,246];	NO_DATA	1	1		6.097560976
CLCdnRY10_40861	1	1	16	33	uv|JX025643.1:1-2941	2746	2763	Weak	Weak	Suspect[1,15];Suspect[223,245];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.93877551
CLCdnRY10_40861	1	1	205	222	uv|JX025643.1:1-2941	2763	2746	Weak	Weak	Suspect[1,15];Suspect[223,245];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.93877551
CLCdnRY2_58689	1	1	224	239	uv|KF719005.1:2205-5132	2828	2813	Weak	Weak	Suspect[240,245];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch06, complete genome	6.12244898
CLCdnRY9_9081	1	1	224	239	uv|JQ895026.1:9998-10116	51	66	Weak	Weak	Suspect[240,245];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599919 (LOC102599919), transcript variant X3, mRNA	6.12244898
SdnRY1_91182	1	1	230	245	uv|U89960.1:3-1162	404	389	Weak	Weak	None	TRUE_BIOLOGICAL	4892	1	Solanum lycopersicum cultivar I-3 chromosome 9	6.12244898
CLCdnRY12_82247	1	1	5	20	uv|J02459.1:1-48502-49	31181	31196	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	10699	1	Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-2) gene, nuclear gene encoding chloroplast protein, complete cds	6.12244898
CLCdnRY2_23607	1	1	12	27	uv|JX310867.1:868-3760	876	891	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	1224	1		6.12244898
CLCdnRY10_72528	1	1	226	244	uv|J02459.1:1-48502-49	24091	24073	Moderate	Moderate	None	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589232 (LOC102589232), transcript variant X12, misc_RNA	7.37704918
CLCdnRY10_11823	1	1	32	49	uv|KC702210.1:1-1022	575	558	None	Weak	Suspect[1,17];	TRUE_ARTIFICIAL	81077	81077	Solanum phureja sieve element occlusion c (SEOc) mRNA, complete cds	6.967213115
CLCdnRY11_55175	1	1	4	21	uv|M77169.1:820-5161	872	889	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	1485	1	Solanum pennellii chromosome ch02, complete genome	6.967213115
CLCdnRY12_45410	1	1	205	221	uv|JN204887.1:1-998	345	361	Weak	Weak	Suspect[222,244];	NO_DATA	1	1	PREDICTED: Solanum tuberosum transmembrane 9 superfamily member 1 (LOC102600734), mRNA	6.557377049
CLCdnRY6_68094	1	1	205	221	uv|JN204887.1:1-998	345	361	Weak	Weak	Suspect[222,244];	NO_DATA	1	1	PREDICTED: Solanum tuberosum transmembrane 9 superfamily member 1 (LOC102600734), mRNA	6.557377049
CLCdnRY9_30318	1	1	210	226	uv|JF909482.1:3850-8059	2750	2734	Weak	Weak	Suspect[227,244];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum pennellii ras-related protein RABA5c-like (LOC107029288), mRNA	6.557377049
VdnRY2_25355	1	1	6	22	uv|EU048866.1:1404-1498	47	31	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum pennellii periaxin-like (LOC107014321), transcript variant X3, mRNA	6.557377049
CLCdnRY10_58706	1	1	13	28	uv|KC702203.1:1-1124	536	521	Weak	Weak	Suspect[1,12];	TRUE_ARTIFICIAL	81077	81077	Solanum pennellii chromosome ch04, complete genome	6.147540984
CLCdnRY10_58777	1	1	22	37	uv|DQ092493.1:8086-8184	78	63	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum ACT domain-containing protein ACR4-like (LOC102581080), transcript variant X2, mRNA	6.147540984
CLCdnRY10_11823	1	1	18	33	uv|KC702228.1:1-1023	899	884	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	196118	1	Solanum phureja sieve element occlusion c (SEOc) mRNA, complete cds	6.147540984
CLCdnRY2_42498	1	1	22	37	uv|DQ092493.1:8086-8184	78	63	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum ACT domain-containing protein ACR4-like (LOC102581080), transcript variant X2, mRNA	6.147540984
CLCdnRY6_43614	1	1	3	18	uv|M16217.1:1-2529	183	198	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum transcription factor APFI-like (LOC102577772), transcript variant X2, mRNA	6.147540984
CLCdnRY12_56011	1	1	217	232	uv|KC702234.1:1-1022	907	892	Weak	Weak	Suspect[233,243];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like (LOC102603919), transcript variant X1, mRNA	6.172839506
CLCdnRY7_46038	1	1	204	219	uv|L08874.1:7324-7372-48	55	40	Weak	Weak	Suspect[220,243];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102602981 (LOC102602981), ncRNA	6.172839506
CLCdnRY11_86176	1	1	18	33	uv|DQ391279.1:13402-14600	842	827	Weak	Weak	Suspect[1,17];	NO_DATA	1	1		6.172839506
CLCdnRY3_31618	1	1	8	23	uv|JN381160.1:2018-4126	436	421	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum pennellii histone acetyltransferase MCC1 (LOC107012199), transcript variant X2, mRNA	6.172839506
CLCdnRY6_34396	1	1	223	238	uv|L08862.1:1-2039	987	972	Weak	Weak	Suspect[239,243];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum serine/threonine-protein kinase SRPK-like (LOC102601887), transcript variant X2, mRNA	6.172839506
CLCdnRY10_35998	1	1	13	31	uv|AF379854.1:3-2710	694	712	Moderate	Moderate	Suspect[1,12];	TRUE_BIOLOGICAL	5820	1	Solanum pennellii chromosome ch10, complete genome	7.438016529
CLCdnRY10_55545	1	1	22	38	uv|KF718978.1:2204-3575	683	667	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	3700	1	Solanum pennellii chromosome ch06, complete genome	6.611570248
CLCdnRY1_56693	1	1	11	27	uv|KF719006.1:2204-2928	117	101	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 11	6.611570248
VdnRY1_81431	1	1	6	22	uv|KF680545.1:1-2837	1216	1200	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.611570248
CLCdnRY11_77020	1	1	9	24	uv|NGB00410.1:1-474	411	396	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Capsicum annuum 3-ketoacyl-CoA synthase 12-like (LOC107873533), mRNA	6.198347107
CLCdnRY3_67221	1	1	216	231	uv|L08862.1:1-2039	2028	2013	Weak	Weak	Suspect[237,242];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 7	6.198347107
CLCdnRY3_67221	1	1	221	236	uv|M29590.1:76-167	6	21	Weak	Weak	Suspect[237,242];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 7	6.198347107
CLCdnRY4_43431	1	1	5	20	uv|M16192.1:1-2517-49	1806	1791	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum mitochondrial pyruvate carrier 1-like (LOC102579853), transcript variant X1, mRNA	6.198347107
CLCdnRY4_54829	1	1	224	239	uv|X05261.1:1-181	69	84	Weak	Weak	Suspect[240,242];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At5g63710 (LOC102604943), transcript variant X2, mRNA	6.198347107
SdnRY1_91685	1	1	203	218	uv|KC702192.1:1-523	267	282	Weak	Weak	Suspect[219,242];	TRUE_BIOLOGICAL	196118	1		6.198347107
SdnRY1_91710	1	1	22	37	uv|GU593055.1:13024-13902-49	557	542	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	6.198347107
CLCdnRY11_7332	1	1	22	37	uv|KC702216.1:1-1022	987	972	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch08, complete genome	6.198347107
CLCdnRY1_18773	1	1	7	22	uv|KC702208.1:1-1350	308	323	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum UDP-glycosyltransferase 89A2-like (LOC102579214), mRNA	6.198347107
CLCdnRY3_24892	1	1	18	33	uv|AF379854.1:3-2710	1180	1165	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	Solanum pennellii chromosome ch12, complete genome	6.198347107
CLCdnRY5_40681	1	1	22	37	uv|EU546815.1:1997-2088	66	81	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	28883	1	PREDICTED: Solanum tuberosum putative U-box domain-containing protein 50 (LOC102583320), mRNA	6.198347107
CLCdnRY5_55629	1	1	221	236	uv|J02459.1:1-48502-49	29503	29488	Weak	Weak	Suspect[237,242];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum tubulin-folding cofactor C (LOC102590682), mRNA	6.198347107
CLCdnRY9_69398	1	1	216	231	uv|L08862.1:1-2039	2028	2013	Weak	Weak	Suspect[237,242];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 7	6.198347107
CLCdnRY9_69398	1	1	221	236	uv|M29590.1:76-167	6	21	Weak	Weak	Suspect[237,242];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 7	6.198347107
VdnRY1_99601	1	1	8	23	uv|JX310867.1:868-3760	2406	2421	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	1224	1	Solanum pennellii chromosome ch12, complete genome	6.198347107
VdnRY2_120258	1	1	221	236	uv|DQ058733.1:2419-2517	82	97	Weak	Weak	Suspect[237,242];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587970 (LOC102587970), transcript variant X17, misc_RNA	6.198347107
SdnRY1_91814	1	1	215	236	uv|U14127.1:375-466	43	22	Moderate	Moderate	Suspect[237,241];	TRUE_BIOLOGICAL	460517	1	Agaricus bisporus var. bisporus H97 mitochondrion, complete genome	8.713692946
CLCdnRY12_48355	1	1	219	236	uv|JX025643.1:1-2941	437	454	Weak	Weak	Suspect[237,241];	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable esterase D14L (LOC102593554), mRNA	7.053941909
CLCdnRY8_44716	1	1	25	42	uv|AF061931.1:630-934	262	245	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum pennellii pentatricopeptide repeat-containing protein At2g36240 (LOC107026903), transcript variant X4, mRNA	7.053941909
CLCdnRY5_59115	1	1	210	226	uv|Z29589.1:3211-4486	527	511	Weak	Weak	Suspect[227,241];	TRUE_BIOLOGICAL	4527	1	PREDICTED: Solanum tuberosum transcription factor GTE1-like (LOC102580769), transcript variant X2, mRNA	6.639004149
VdnRY3_74242	1	1	19	34	uv|KC702216.1:1-1022	223	238	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	196118	1		6.22406639
CLCdnRY10_77532	1	1	203	219	uv|M34305.1:3197-4538	1021	1037	Weak	Weak	Suspect[220,240];	TRUE_BIOLOGICAL	6237	1		6.666666667
CLCdnRY7_64667	1	1	9	24	uv|J02400.1:1-5243-49	3180	3195	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum NEDD8-activating enzyme E1 catalytic subunit (LOC102584079), transcript variant X2, mRNA	6.25
SdnRY1_92089	1	1	214	229	uv|GU593055.1:13024-13902-49	696	711	Weak	Weak	Suspect[230,240];	TRUE_BIOLOGICAL	2132	1		6.25
CLCdnRY11_57391	1	1	210	225	uv|NGB00587.1:1-3232	2857	2872	Weak	Weak	Suspect[226,240];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum ras-related protein RABA2a-like (LOC102604566), mRNA	6.25
CLCdnRY3_30249	1	1	5	20	uv|U02452.1:1-991	148	163	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum cytochrome c oxidase-assembly factor COX23, mitochondrial (LOC102592822), mRNA	6.25
CLCdnRY9_76604	1	1	203	218	uv|J01783.1:4575-7894-49	1593	1608	Weak	Weak	Suspect[219,240];	TRUE_BIOLOGICAL	724	1	PREDICTED: Solanum tuberosum fatty acid amide hydrolase-like (LOC102604577), transcript variant X2, mRNA	6.25
VdnRY2_115907	1	1	203	218	uv|M28248.1:1-1709	1481	1496	Weak	Weak	Suspect[219,240];	TRUE_BIOLOGICAL	153135	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g26790, mitochondrial (LOC102582865), transcript variant X6, misc_RNA	6.25
CLCdnRY12_21800	1	1	9	27	uv|JN204883.1:1-1492	1011	993	Moderate	Moderate	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum tuberosum CDPK-related kinase 1 (LOC102591187), mRNA	7.531380753
VdnRY5_6449	1	1	204	220	uv|J02459.1:1-48502-49	36827	36843	Weak	Weak	Suspect[221,239];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580609 (LOC102580609), transcript variant X2, mRNA	6.694560669
VdnRY2_151298	1	1	200	216	uv|X70481.1:3564-4492	245	261	Weak	Weak	Suspect[217,239];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch08, complete genome	6.694560669
CLCdnRY11_73140	1	1	215	230	uv|EF437940.1:7199-10690-48	135	120	Weak	Weak	Suspect[231,239];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 5	6.276150628
VdnRY1_13495	1	1	220	235	uv|J02482.1:1-5386-49	3654	3669	Weak	Weak	Suspect[236,239];	TRUE_BIOLOGICAL	10842	1	Solanum pennellii chromosome ch02, complete genome	6.276150628
VdnRY4_49876	1	1	1	16	uv|L11614.1:167-678	325	310	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At1g11900 (LOC102583235), mRNA	6.276150628
CLCdnRY12_55073	1	1	25	40	uv|NGB00358.1:6088-6186	27	12	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1B-16 (LOC102595027), mRNA	6.276150628
CLCdnRY1_52913	1	1	18	33	uv|DQ883651.3:1-644	474	459	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum pennellii E3 ubiquitin-protein ligase UPL5-like (LOC107002406), mRNA	6.276150628
CLCdnRY6_27265	1	1	208	223	uv|JN581374.1:616-2149	700	715	Weak	Weak	Suspect[224,239];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum cytochrome c oxidase subunit 6b-2 (LOC101258567), mRNA	6.276150628
CLCdnRY3_33358	1	1	219	237	uv|U30497.1:3230-4814	1550	1532	Moderate	Moderate	Suspect[238,238];	NO_DATA	1	1	PREDICTED: Solanum pennellii uncharacterized LOC107026721 (LOC107026721), transcript variant X2, mRNA	7.56302521
SdnRY1_92487	1	1	5	22	uv|KC702208.1:1-1350	26	9	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	1386	1		7.142857143
CLCdnRY1_53309	1	1	7	23	uv|Z29589.1:3211-4486	132	116	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	4527	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.722689076
CLCdnRY10_34408	1	1	214	229	uv|M16217.1:1-2529	353	368	Weak	Weak	Suspect[230,238];	TRUE_BIOLOGICAL	1279	1		6.302521008
CLCdnRY10_37950	1	1	1	16	uv|JN381160.1:2018-4126	1217	1232	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum 2-alkenal reductase (NADP(+)-dependent)-like (LOC102583129), mRNA	6.302521008
CLCdnRY10_76196	1	1	16	31	uv|AY568055.1:6692-7837	403	418	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	Solanum pennellii chromosome ch10, complete genome	6.302521008
SdnRY1_92538	1	1	15	30	uv|U67875.1:18-1316	1108	1093	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	4895	1	Solanum pennellii chromosome ch02, complete genome	6.302521008
CLCdnRY10_15901	1	1	217	232	uv|AF379854.1:4263-5841	1158	1173	Weak	Weak	Suspect[233,238];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cytokinesis protein sepA-like (LOC102582165), mRNA	6.302521008
CLCdnRY10_65542	1	1	209	224	uv|JN581377.1:1749-2242	288	273	Weak	Weak	Suspect[225,238];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probable receptor-like protein kinase At5g47070 (LOC102585862), mRNA	6.302521008
CLCdnRY12_33927	1	1	212	227	uv|U89960.1:4738-7717	474	489	Weak	Weak	Suspect[228,238];	TRUE_BIOLOGICAL	4892	1	Homo sapiens fosmid clone XXFOS-83307H10 from 4, complete sequence	6.302521008
VdnRY6_17383	1	1	208	224	uv|X51450.1:2521-3852	1150	1166	Weak	Weak	Suspect[225,237];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102595899 (LOC102595899), mRNA	6.751054852
VdnRY3_92421	1	1	208	224	uv|KF719005.1:2205-5132	1537	1553	Weak	Weak	Suspect[225,237];	TRUE_BIOLOGICAL	3701	1	Solanum tuberosum chromosome 11 clone RH036I14, complete sequence	6.751054852
CLCdnRY1_55248	1	1	15	30	uv|Z50122.1:2317-2422	30	45	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum putative F-box protein At3g10430 (LOC102596499), transcript variant X2, mRNA	6.329113924
SdnRY1_92646	1	1	215	230	uv|KC702224.1:1-1022	156	141	Weak	Weak	Suspect[231,237];	TRUE_BIOLOGICAL	196118	1		6.329113924
VdnRY2_124967	1	1	10	25	uv|KF718996.1:2914-4532	933	918	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum agglutinin alpha chain-like (LOC107057759), transcript variant X2, mRNA	6.329113924
VdnRY4_27038	1	1	217	232	uv|Z46234.1:664-3443	933	948	Weak	Weak	Suspect[233,237];	TRUE_BIOLOGICAL	4892	1	Solanum lycopersicum glucose-6-phosphate isomerase 1 (GPI1), mRNA	6.329113924
CLCdnRY10_80072	1	1	2	17	uv|L11060.1:6045-6136	42	57	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	Solanum pennellii chromosome ch06, complete genome	6.329113924
CLCdnRY11_42354	1	1	11	26	uv|KC702198.1:1-1023	522	537	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch04, complete genome	6.329113924
CLCdnRY3_63755	1	1	15	30	uv|DQ092493.1:8086-8184	78	63	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum ACT domain-containing protein ACR4-like (LOC102581080), transcript variant X2, mRNA	6.329113924
CLCdnRY8_16424	1	1	8	23	uv|KC702192.1:1-523	136	151	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum SAGA-associated factor 73-like (LOC102603949), mRNA	6.329113924
VdnRY4_8070	1	1	3	18	uv|KY031736.1:1-4885	1072	1087	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum xylulose 5-phosphate/phosphate translocator, chloroplastic (LOC102588269), mRNA	6.329113924
CLCdnRY4_42464	1	1	10	32	uv|J02400.1:1-5243-49	2124	2102	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like (LOC102598587), transcript variant X1, mRNA	9.322033898
VdnRY1_155336	1	1	196	213	uv|J02459.1:1-48502-49	10961	10978	Weak	Weak	Suspect[214,236];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum pennellii uncharacterized LOC107010272 (LOC107010272), ncRNA	7.203389831
CLCdnRY6_86101	1	1	17	34	uv|AF379854.1:4263-5841	1200	1217	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g06000 (LOC102597229), transcript variant X1, mRNA	7.203389831
CLCdnRY11_51583	1	1	7	22	uv|AF129072.1:907-3477	1692	1677	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum two-component response regulator-like APRR5 (LOC102603187), mRNA	6.355932203
SdnRY1_92810	1	1	204	219	uv|M77169.1:820-5161	904	889	Weak	Weak	Suspect[220,236];	TRUE_BIOLOGICAL	1485	1	Solanum lycopersicum cultivar I-3 chromosome 2	6.355932203
SdnRY1_92851	1	1	204	219	uv|M34305.1:3197-4538	1189	1204	Weak	Weak	Suspect[220,236];	TRUE_BIOLOGICAL	6237	1	Solanum tuberosum chromosome 11 clone RH052D21, complete sequence	6.355932203
SdnRY1_92887	1	1	15	30	uv|L08859.1:3450-3547	46	61	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 4	6.355932203
VdnRY4_25462	1	1	207	222	uv|KF718979.1:2206-6730	2135	2150	Weak	Weak	Suspect[223,236];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At4g26540 (LOC102600451), mRNA	6.355932203
CLCdnRY11_71184	1	1	11	26	uv|KC702202.1:1-1020	440	425	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 6	6.355932203
CLCdnRY11_82891	1	1	17	32	uv|KF853601.1:1021-3588	1165	1150	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	7711	1	Solanum pennellii chromosome ch08, complete genome	6.355932203
CLCdnRY8_48677	1	1	215	230	uv|U03498.1:7366-8059	563	578	Weak	Weak	Suspect[231,236];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592542 (LOC102592542), transcript variant X1, ncRNA	6.355932203
VdnRY3_76633	1	1	12	27	uv|JF909481.1:3855-5640	1104	1089	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	6.355932203
VdnRY5_46141	1	1	212	227	uv|U47103.2:1-211	161	176	Weak	Weak	Suspect[228,236];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D (LOC102599943), transcript variant X2, mRNA	6.355932203
VdnRY1_32243	1	1	198	215	uv|V00604.2:1-6407-49	5008	5025	Weak	Weak	Suspect[216,235];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum lycopersicum 2-oxoglutarate-Fe(II) type oxidoreductase hxnY (LOC101264216), transcript variant X6, mRNA	7.234042553
CLCdnRY3_47872	1	1	202	217	uv|JF909481.1:3855-5640	115	130	Weak	Weak	Suspect[218,235];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 4	6.382978723
CLCdnRY4_47152	1	1	216	231	uv|KF718979.1:2206-6730	466	481	Weak	Weak	Suspect[232,235];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 11	6.382978723
CLCdnRY6_21826	1	1	201	216	uv|KC702228.1:1-1023	524	509	Weak	Weak	Suspect[217,235];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum biotin carboxyl carrier protein of acetyl-CoA carboxylase (LOC102593052), mRNA	6.382978723
SdnRY1_92977	1	1	220	235	uv|HM640258.1:317-2913	1241	1256	Weak	Weak	None	TRUE_BIOLOGICAL	5073	1	Solanum pennellii chromosome ch02, complete genome	6.382978723
SdnRY1_93084	1	1	2	17	uv|L08862.1:1-2039	1981	1996	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At1g74900, mitochondrial (LOC102578290), transcript variant X6, mRNA	6.382978723
VdnRY2_73618	1	1	211	226	uv|KF680545.1:1-2837	1449	1434	Weak	Weak	Suspect[227,235];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 4	6.382978723
VdnRY1_70478	1	1	208	225	uv|AF061931.1:630-934	245	262	Weak	Weak	Suspect[226,234];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g36240 (LOC102604446), transcript variant X4, mRNA	7.264957265
VdnRY1_100047	1	1	215	231	uv|AF379854.1:4263-5841	1469	1453	Weak	Weak	Suspect[1,14];Suspect[232,234];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	6.837606838
VdnRY1_100047	1	1	15	30	uv|KM407511.1:1093-1625	69	54	Weak	Weak	Suspect[1,14];Suspect[232,234];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	6.41025641
VdnRY1_100047	1	1	207	222	uv|U67875.1:8796-9922	486	501	Weak	Weak	Suspect[1,14];Suspect[232,234];	TRUE_BIOLOGICAL	4895	1	Solanum pennellii chromosome ch02, complete genome	6.41025641
VdnRY1_181793	1	1	13	28	uv|FJ931533.1:7978-12753-49	2143	2158	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum uncharacterized LOC102583794 (LOC102583794), mRNA	6.41025641
CLCdnRY3_35660	1	1	213	228	uv|J02459.1:1-48502-49	33352	33337	Weak	Weak	Suspect[229,234];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum uncharacterized LOC102591236 (LOC102591236), transcript variant X3, mRNA	6.41025641
CLCdnRY6_32684	1	1	22	37	uv|DQ391279.1:1-10285	931	916	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	308911	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.41025641
CLCdnRY7_15917	1	1	22	38	uv|M34305.1:3197-4538	1196	1180	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum putative pterin-4-alpha-carbinolamine dehydratase (LOC102602253), transcript variant X2, mRNA	6.86695279
VdnRY2_16167	1	1	12	27	uv|AY568055.1:9139-10024	241	226	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	PREDICTED: Solanum tuberosum isoflavone 2'-hydroxylase-like (LOC102579822), mRNA	6.43776824
VdnRY1_23872	1	1	24	39	uv|JN874480.1:11708-20103	7073	7088	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	PREDICTED: Solanum tuberosum 14-3-3 protein 7 (LOC102581950), mRNA	6.43776824
CLCdnRY12_89936	1	1	7	23	uv|U09128.1:3334-10218	5026	5042	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	91347	1		6.896551724
CLCdnRY10_62233	1	1	13	28	uv|KY031736.1:1-4885	1821	1836	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592641 (LOC102592641), ncRNA	6.465517241
CLCdnRY7_14876	1	1	21	36	uv|KC702187.1:1-1023	578	563	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum 40S ribosomal protein S26-3-like (LOC102580154), mRNA	6.465517241
CLCdnRY10_77933	1	1	2	17	uv|U02427.1:2631-2729	15	30	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch02, complete genome	6.465517241
CLCdnRY12_80440	1	1	20	35	uv|KY031725.1:1-5101	1776	1791	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g10690 (LOC102603538), transcript variant X3, misc_RNA	6.465517241
CLCdnRY1_27389	1	1	7	22	uv|FJ931533.1:7978-12753-49	986	1001	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum nuclear pore complex protein NUP85 (LOC102591614), mRNA	6.465517241
CLCdnRY2_37160	1	1	1	16	uv|NGB00086.1:203-407	43	28	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum WD repeat-containing protein YMR102C (LOC102593255), transcript variant X2, mRNA	6.465517241
CLCdnRY6_39048	1	1	195	210	uv|KC702236.1:1-1024	959	974	Weak	Weak	Suspect[211,232];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum arogenate dehydratase/prephenate dehydratase 2, chloroplastic-like (LOC102602486), transcript variant X1, mRNA	6.465517241
VdnRY1_16936	1	1	200	215	uv|U66885.1:3752-3849	39	24	Weak	Weak	Suspect[216,232];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1B-23 (LOC102604747), transcript variant X2, mRNA	6.465517241
VdnRY5_12183	1	1	192	207	uv|JQ394801.1:2245-2345	37	52	Weak	Weak	Suspect[208,231];	NO_DATA	1	1	Solanum tuberosum BURP domain-containing protein (LOC102577637), mRNA	6.493506494
VdnRY2_59070	1	1	11	26	uv|U14124.1:3387-3557	152	167	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum abscisic acid receptor PYL2-like (LOC102594622), mRNA	6.493506494
VdnRY2_122766	1	1	214	229	uv|M74186.1:2188-2959	276	261	Weak	Weak	Suspect[230,231];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum primase homolog protein (LOC102591920), transcript variant X4, mRNA	6.493506494
VdnRY3_79339	1	1	17	32	uv|KY031724.1:1-5301	1827	1812	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum ornithine carbamoyltransferase, chloroplastic-like (LOC102591304), mRNA	6.493506494
CLCdnRY11_74556	1	1	2	18	uv|AY093584.1:3788-6062	200	216	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	5052	1	Solanum pennellii chromosome ch04, complete genome	6.956521739
CLCdnRY10_84983	1	1	201	216	uv|U55760.1:1-2749	917	932	Weak	Weak	Suspect[217,230];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	6.52173913
CLCdnRY1_41592	1	1	21	36	uv|KY031734.1:1-4625	734	719	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum uncharacterized LOC107062433 (LOC107062433), ncRNA	6.52173913
CLCdnRY2_49901	1	1	208	223	uv|NGB00620.1:1102-1287	58	73	Weak	Weak	Suspect[224,230];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 4	6.52173913
CLCdnRY4_55825	1	1	15	30	uv|JN874480.1:3431-5019	269	284	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum protein ASPARTIC PROTEASE IN GUARD CELL 1-like (LOC102580715), mRNA	6.52173913
CLCdnRY8_48324	1	1	15	30	uv|KJ541666.1:1-220	90	105	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.52173913
VdnRY5_27183	1	1	14	29	uv|DQ391279.1:13402-14600	730	745	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	Solanum pennellii chromosome ch11, complete genome	6.52173913
CLCdnRY11_76283	1	1	21	36	uv|J02482.1:1-5386-49	1720	1735	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Capsicum annuum rhodanese-like domain-containing protein 9, chloroplastic (LOC107863725), mRNA	6.52173913
CLCdnRY1_14516	1	1	20	35	uv|KC702187.1:1-1023	578	563	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum 40S ribosomal protein S26-3-like (LOC102580154), mRNA	6.52173913
CLCdnRY1_49883	1	1	12	27	uv|AF061932.1:1400-1686	26	41	Weak	Weak	Suspect[1,11];	NO_DATA	1	1	Solanum pennellii chromosome ch09, complete genome	6.52173913
CLCdnRY6_5930	1	1	211	226	uv|KC702178.1:1-2022	1974	1989	Weak	Weak	Suspect[227,230];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum zinc finger HIT domain-containing protein 3 (LOC102582946), mRNA	6.52173913
CLCdnRY8_7380	1	1	10	25	uv|L05669.1:1-1770	237	252	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum protein FATTY ACID EXPORT 5 (LOC102584920), mRNA	6.52173913
VdnRY2_172937	1	1	189	210	uv|KC702231.1:1-1021	54	33	Weak	Weak	Suspect[211,229];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum serine/arginine-rich splicing factor 2-like (LOC102597653), transcript variant X2, misc_RNA	9.170305677
VdnRY6_35975	1	1	15	32	uv|JQ927446.1:4885-6835-49	1613	1630	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	Solanum tuberosum heterotrimeric G protein alpha subunit 2 mRNA, complete cds	7.423580786
CLCdnRY5_52035	1	1	199	215	uv|J02400.1:1-5243-49	1622	1606	Weak	Weak	Suspect[216,229];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 57 (LOC102602181), mRNA	6.986899563
CLCdnRY5_61898	1	1	199	215	uv|EU546814.1:7770-7919	38	54	Weak	Weak	Suspect[216,229];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 7	6.986899563
VdnRY6_19958	1	1	11	27	uv|U03445.1:208-306	90	74	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum potassium transporter 7 (LOC102582759), mRNA	6.986899563
CLCdnRY11_26521	1	1	208	223	uv|JN581374.1:616-2149	700	715	Weak	Weak	Suspect[224,229];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum cytochrome c oxidase subunit 6b-2 (LOC101258567), mRNA	6.550218341
CLCdnRY2_60470	1	1	198	213	uv|KC702218.1:1-1133	438	423	Weak	Weak	Suspect[214,229];	TRUE_ARTIFICIAL	81077	81077	Solanum pennellii chromosome ch12, complete genome	6.550218341
VdnRY1_43376	1	1	16	31	uv|LC029918.1:1207-1301	57	42	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum sirohydrochlorin ferrochelatase (LOC102599852), mRNA	6.550218341
VdnRY3_110387	1	1	11	26	uv|U89932.1:553-1856	949	964	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	6.550218341
CLCdnRY8_53580	1	1	18	33	uv|NGB00587.1:1-3232	1997	1982	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 11	6.550218341
VdnRY1_59130	1	1	17	32	uv|KF719004.1:2204-2946	233	248	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum casein kinase I-like (LOC102578304), mRNA	6.550218341
VdnRY5_26385	1	1	1	21	uv|KC503967.1:1442-2279	725	745	Moderate	Moderate	None	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum alpha-aminoadipic semialdehyde synthase-like (LOC102586908), transcript variant X2, mRNA	8.771929825
VdnRY4_61732	1	1	18	34	uv|M16192.1:1-2517-49	853	869	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum ferredoxin--NADP reductase, root-type isozyme, chloroplastic-like (LOC102579393), mRNA	7.01754386
CLCdnRY10_35199	1	1	11	26	uv|AF041247.1:4293-4739	214	229	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	Solanum tuberosum NtPRp27-like protein (LOC102577760), mRNA	6.578947368
CLCdnRY6_81411	1	1	22	37	uv|Z50121.2:19-1510	1252	1267	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	620	1	Solanum lycopersicum chromosome ch04, complete genome	6.578947368
VdnRY1_68441	1	1	200	215	uv|AF310136.1:497-2034	1151	1136	Weak	Weak	Suspect[216,228];	TRUE_BIOLOGICAL	91347	1		6.578947368
VdnRY1_79088	1	1	23	38	uv|J02459.1:1-48502-49	40578	40593	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	10699	1	Solanum tuberosum chromosome 8 clone RHPOTKEY200P15, complete sequence	6.578947368
VdnRY3_33063	1	1	13	28	uv|EU729724.1:583-806	165	180	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum RING-H2 finger protein ATL38-like (LOC102604126), mRNA	6.578947368
CLCdnRY11_60128	1	1	16	31	uv|KY031734.1:1-4625	676	691	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum protein NLP9-like (LOC102596781), mRNA	6.578947368
CLCdnRY11_88162	1	1	20	35	uv|AY568055.1:6692-7837	410	425	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	TPA_inf: Solanum tuberosum lycopene epsilon cyclase (LCYe) gene, LCYe-4 allele, complete cds	6.578947368
CLCdnRY3_34159	1	1	18	33	uv|EF216318.1:1961-4116	1738	1723	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	Uncultured fungus clone S95 18S ribosomal RNA gene, partial sequence	6.578947368
CLCdnRY6_20113	1	1	190	215	uv|J01783.1:4575-7894-49	975	951	Moderate	Moderate	Suspect[216,227];	TRUE_BIOLOGICAL	724	1	Solanum lycopersicum cultivar I-3 chromosome 6	11.01321586
VdnRY4_11648	1	1	197	214	uv|EU186086.1:9349-10480-30	167	150	Weak	Weak	Suspect[215,227];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cytochrome P450 711A1 (LOC102593258), mRNA	7.488986784
CLCdnRY2_57854	1	1	11	27	uv|M77239.1:3204-3301	72	56	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	153135	1	Solanum pennellii chromosome ch06, complete genome	7.04845815
VdnRY1_218918	1	1	3	19	uv|NGB00620.1:1102-1287	77	61	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum ABC transporter D family member 2, chloroplastic (LOC102581284), mRNA	7.04845815
CLCdnRY10_51561	1	1	193	208	uv|AF379854.1:3-2710	1583	1568	Weak	Weak	Suspect[209,227];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum SNF1-related protein kinase regulatory subunit beta-3-like (LOC102595708), transcript variant X4, mRNA	6.607929515
CLCdnRY12_20765	1	1	200	215	uv|J01783.1:4575-7894-49	966	951	Weak	Weak	Suspect[216,227];	TRUE_BIOLOGICAL	724	1	Solanum lycopersicum cultivar I-3 chromosome 6	6.607929515
CLCdnRY12_88543	1	1	2	17	uv|U02443.1:882-1073	74	59	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	Solanum pennellii chromosome ch02, complete genome	6.607929515
SdnRY1_94688	1	1	7	22	uv|J02459.1:1-48502-49	24088	24073	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	10699	1		6.607929515
CLCdnRY12_63823	1	1	198	215	uv|X51450.1:2521-3852	119	136	Weak	Weak	Suspect[216,226];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum glycine-rich cell wall structural protein 1-like (LOC107058791), mRNA	7.522123894
CLCdnRY8_35899	1	1	192	208	uv|NGB00413.1:4732-7508	2270	2286	Weak	Weak	Suspect[209,226];	TRUE_BIOLOGICAL	12103	1	Solanum tuberosum subsp. tuberosum cv. Dessiree mRNA for chloroplast glyceraldehyde-3-phosphate dehydrogenase (gapdh gene)	7.079646018
VdnRY6_19591	1	1	202	218	uv|DQ092493.1:5726-5822	47	31	Weak	Weak	Suspect[219,226];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum uncharacterized LOC102584187 (LOC102584187), mRNA	7.079646018
CLCdnRY11_35428	1	1	192	207	uv|U89961.1:1-4240	248	233	Weak	Weak	Suspect[208,226];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 4	6.637168142
CLCdnRY5_90249	1	1	187	202	uv|LC121524.1:2980-3796	318	303	Weak	Weak	Suspect[203,226];	NO_DATA	1	1	Solanum pennellii chromosome ch11, complete genome	6.637168142
CLCdnRY9_46241	1	1	190	205	uv|JN581374.1:616-2149	138	153	Weak	Weak	Suspect[206,226];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum pennellii probable NAD(P)H dehydrogenase (quinone) FQR1-like 2 (LOC107008480), transcript variant X3, mRNA	6.637168142
SdnRY1_94972	1	1	24	39	uv|X70481.1:3564-4492	724	709	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 10	6.637168142
SdnRY1_94989	1	1	192	207	uv|AY568055.1:6692-7837	425	410	Weak	Weak	Suspect[208,226];	NO_DATA	1	1	TPA_inf: Solanum tuberosum lycopene epsilon cyclase (LCYe) gene, LCYe-4 allele, complete cds	6.637168142
VdnRY1_113397	1	1	195	210	uv|M34305.1:3197-4538	361	376	Weak	Weak	Suspect[211,226];	TRUE_BIOLOGICAL	6237	1	PREDICTED: Solanum tuberosum callose synthase 7-like (LOC102602725), transcript variant X2, mRNA	6.637168142
VdnRY2_29243	1	1	1	16	uv|AY753578.1:1-838	326	341	Weak	Weak	None	TRUE_BIOLOGICAL	6181	1	PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 35 (LOC102582464), mRNA	6.637168142
CLCdnRY7_65904	1	1	6	21	uv|JN874480.1:22405-22502	49	64	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	Solanum pennellii chromosome ch06, complete genome	6.637168142
CLCdnRY11_88327	1	1	23	42	uv|KF680544.1:323-942	129	148	Moderate	Moderate	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum U-box domain-containing protein 4-like (LOC102599803), mRNA	8.444444444
CLCdnRY10_36653	1	1	11	28	uv|JF909482.1:3850-8059	4064	4047	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum protein DEHYDRATION-INDUCED 19 homolog 4-like (LOC102578393), mRNA	7.555555556
CLCdnRY1_25512	1	1	193	210	uv|KC702209.1:1-2022	1057	1040	Weak	Weak	Suspect[211,225];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum F-box protein At3g12350 (LOC102588172), mRNA	7.555555556
CLCdnRY10_69783	1	1	206	221	uv|AY568055.1:6692-7837	428	413	Weak	Weak	Suspect[222,225];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 2	6.666666667
CLCdnRY11_57830	1	1	187	202	uv|U09128.1:3334-10218	3617	3632	Weak	Weak	Suspect[203,225];	TRUE_BIOLOGICAL	91347	1	Solanum lycopersicum cultivar I-3 chromosome 8	6.666666667
CLCdnRY12_51445	1	1	25	40	uv|KC702178.1:1-2022	1940	1925	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum dephospho-CoA kinase-like (LOC102587364), transcript variant X7, mRNA	6.666666667
CLCdnRY1_13269	1	1	10	25	uv|KM407505.1:939-2365	92	107	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600332 (LOC102600332), transcript variant X2, mRNA	6.666666667
CLCdnRY2_62681	1	1	5	20	uv|JN874480.1:22405-22502	49	64	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	Solanum pennellii chromosome ch06, complete genome	6.666666667
VdnRY1_95500	1	1	188	203	uv|NGB00051.1:1428-2848	1304	1289	Weak	Weak	Suspect[204,225];	NO_DATA	1	1	Solanum pennellii chromosome ch07, complete genome	6.666666667
CLCdnRY10_63233	1	1	203	218	uv|U89932.1:553-1856	476	491	Weak	Weak	Suspect[219,225];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 3	6.666666667
CLCdnRY11_27117	1	1	11	26	uv|U89961.1:1-4240	3049	3064	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.666666667
VdnRY4_59927	1	1	17	32	uv|JN874481.1:57-2095	92	107	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	PREDICTED: Solanum tuberosum E3 ubiquitin ligase BIG BROTHER-like (LOC102583422), transcript variant X2, mRNA	6.666666667
CLCdnRY11_84632	1	1	198	216	uv|KC702194.1:1-1023	681	699	Moderate	Moderate	Suspect[217,224];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 3	8.035714286
VdnRY2_57071	1	1	15	32	uv|EU048869.1:850-942	73	90	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum cardiolipin synthase (CMP-forming), mitochondrial (LOC102596784), mRNA	7.589285714
CLCdnRY11_19939	1	1	5	21	uv|NGB00583.1:3798-3896	41	57	Weak	Weak	Suspect[1,4];	NO_DATA	1	1	PREDICTED: Solanum tuberosum BTB/POZ and TAZ domain-containing protein 3-like (LOC102583750), transcript variant X1, mRNA	7.142857143
VdnRY1_14382	1	1	188	204	uv|JQ437370.1:1-703	248	264	Weak	Weak	Suspect[205,224];	NO_DATA	1	1		7.142857143
CLCdnRY10_25683	1	1	201	217	uv|M16192.1:1-2517-49	1387	1371	Weak	Weak	Suspect[218,224];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 7	7.142857143
CLCdnRY4_25963	1	1	201	217	uv|M16192.1:1-2517-49	1387	1371	Weak	Weak	Suspect[218,224];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 7	7.142857143
VdnRY2_5661	1	1	1	17	uv|JF909482.1:3850-8059	325	341	Weak	Weak	None	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 5	7.142857143
VdnRY3_35996	1	1	22	37	uv|KC702177.1:1-1138	171	186	Weak	Weak	Suspect[1,21];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum serine/threonine-protein kinase GRIK2-like (LOC102605033), transcript variant X2, mRNA	6.696428571
CLCdnRY10_25683	1	1	193	208	uv|EU360963.1:261-355	77	92	Weak	Weak	Suspect[218,224];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 7	6.696428571
CLCdnRY11_22966	1	1	7	22	uv|KC702211.1:1-536	238	253	Weak	Weak	Suspect[1,6];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase RNF8-like (LOC102598484), mRNA	6.696428571
CLCdnRY3_33463	1	1	191	206	uv|U02284.1:1-198	106	91	Weak	Weak	Suspect[207,224];	NO_DATA	1	1		6.696428571
CLCdnRY4_25963	1	1	193	208	uv|EU360963.1:261-355	77	92	Weak	Weak	Suspect[218,224];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 7	6.696428571
CLCdnRY6_38380	1	1	20	35	uv|JN874480.1:6795-9434	1058	1043	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604966 (LOC102604966), mRNA	6.696428571
CLCdnRY12_1522	1	1	163	215	uv|KF719004.1:2204-2946	113	61	Strong	Strong	Suspect[216,223];	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	23.31838565
CLCdnRY3_30822	1	1	13	29	uv|KC702183.1:1-1023	791	775	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii VQ motif-containing protein 4-like (LOC107008731), mRNA	7.174887892
VdnRY4_52555	1	1	188	204	uv|KF718979.1:2206-6730	1648	1664	Weak	Weak	Suspect[205,223];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch05, complete genome	7.174887892
CLCdnRY12_83023	1	1	195	210	uv|KC503967.1:3363-4043-40	547	532	Weak	Weak	Suspect[211,223];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum histone acetyltransferase type B catalytic subunit (LOC102593479), mRNA	6.726457399
CLCdnRY10_7245	1	1	1	16	uv|U47119.2:349-589	207	192	Weak	Weak	None	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum magnesium-chelatase subunit ChlH, chloroplastic (LOC102605088), mRNA	6.726457399
CLCdnRY11_28630	1	1	189	204	uv|DQ391279.1:1-10285	1198	1213	Weak	Weak	Suspect[205,223];	TRUE_BIOLOGICAL	308911	1	Solanum pennellii chromosome ch09, complete genome	6.726457399
SdnRY1_95876	1	1	11	27	uv|J01783.1:4575-7894-49	1422	1438	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	724	1	PREDICTED: Solanum tuberosum uncharacterized LOC102599065 (LOC102599065), transcript variant X4, misc_RNA	7.207207207
VdnRY5_42809	1	1	6	22	uv|L08862.1:2848-3728-49	492	508	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 (LOC102597227), mRNA	7.207207207
VdnRY1_16830	1	1	205	221	uv|JX069764.1:3841-4011	143	127	Weak	Weak	Suspect[222,222];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578172 (LOC102578172), mRNA	7.207207207
SdnRY1_95866	1	1	202	217	uv|KC702198.1:1-1023	491	506	Weak	Weak	Suspect[218,222];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch09, complete genome	6.756756757
CLCdnRY10_20643	1	1	13	28	uv|D13251.1:3029-3126	18	33	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum 3-ketoacyl-CoA synthase 6 (CER6), mRNA	6.756756757
CLCdnRY10_20643	1	1	15	30	uv|AF379854.1:3-2710	710	695	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum 3-ketoacyl-CoA synthase 6 (CER6), mRNA	6.756756757
CLCdnRY10_57324	1	1	25	40	uv|M16217.1:1-2529	1959	1944	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 4	6.756756757
CLCdnRY11_90199	1	1	183	198	uv|LC121524.1:2980-3796	318	303	Weak	Weak	Suspect[199,222];	NO_DATA	1	1	Solanum pennellii chromosome ch11, complete genome	6.756756757
CLCdnRY3_43808	1	1	25	40	uv|U13843.1:1887-9923	4752	4737	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	325454	1	Solanum pennellii chromosome ch12, complete genome	6.756756757
CLCdnRY9_76424	1	1	6	21	uv|KC702222.1:1-1033	333	318	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	33958	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At3g20730 (LOC102587579), mRNA	6.756756757
CLCdnRY1_20960	1	1	192	209	uv|L08934.1:171-1487	247	230	Weak	Weak	Suspect[210,221];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604388 (LOC102604388), transcript variant X8, ncRNA	7.692307692
CLCdnRY11_67792	1	1	1	17	uv|KM407512.1:5898-5979	33	49	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch12, complete genome	7.239819005
CLCdnRY1_58555	1	1	6	22	uv|KC702229.1:1-537	325	341	Weak	Weak	Suspect[1,5];	TRUE_ARTIFICIAL	81077	81077	Solanum lycopersicum cultivar I-3 chromosome 9	7.239819005
VdnRY3_11087	1	1	184	200	uv|AF379854.1:4263-5841	460	476	Weak	Weak	Suspect[201,202];Suspect[219,221];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Nicotiana tomentosiformis uncharacterized LOC104095337 (LOC104095337), transcript variant X11, mRNA	7.239819005
CLCdnRY12_24965	1	1	205	221	uv|KF719001.1:2200-2330	73	57	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum pennellii uncharacterized LOC107027941 (LOC107027941), transcript variant X2, mRNA	7.239819005
CLCdnRY3_29751	1	1	190	206	uv|Z29589.1:3211-4486	527	511	Weak	Weak	Suspect[207,221];	TRUE_BIOLOGICAL	4527	1	PREDICTED: Solanum tuberosum transcription factor GTE1-like (LOC102580769), transcript variant X2, mRNA	7.239819005
CLCdnRY4_67781	1	1	198	214	uv|FJ931533.1:7978-12753-49	4114	4130	Weak	Weak	Suspect[215,221];	TRUE_BIOLOGICAL	7215	1	Solanum lycopersicum cultivar I-3 chromosome 1	7.239819005
CLCdnRY12_82677	1	1	4	19	uv|V00604.2:1-6407-49	194	179	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	10861	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.787330317
CLCdnRY1_42851	1	1	192	207	uv|V00604.2:1-6407-49	4280	4265	Weak	Weak	Suspect[208,221];	TRUE_BIOLOGICAL	10861	1	Solanum pennellii chromosome ch09, complete genome	6.787330317
SdnRY1_96077	1	1	182	197	uv|KC702206.1:1-523	386	371	Weak	Weak	Suspect[198,221];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch02, complete genome	6.787330317
VdnRY1_122554	1	1	23	38	uv|JF909455.1:2712-2846	56	41	Weak	Weak	Suspect[1,22];	NO_DATA	1	1		6.787330317
VdnRY3_11087	1	1	203	218	uv|EF036510.1:1371-1496	104	89	Weak	Weak	Suspect[201,202];Suspect[219,221];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Nicotiana tomentosiformis uncharacterized LOC104095337 (LOC104095337), transcript variant X11, mRNA	6.787330317
CLCdnRY10_82790	1	1	192	207	uv|JX560377.2:202-397	76	61	Weak	Weak	Suspect[208,221];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	6.787330317
CLCdnRY12_64060	1	1	13	28	uv|U55760.1:1-2749	794	779	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum carboxylesterase 1-like (LOC102581191), mRNA	6.787330317
SdnRY1_96122	1	1	197	212	uv|HM162840.2:1721-1833	68	53	Weak	Weak	Suspect[213,221];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.787330317
VdnRY6_40313	1	1	6	21	uv|NGB00412.1:1-1359	707	692	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum vacuolar protein sorting-associated protein 20 homolog 2-like (LOC102602334), mRNA	6.787330317
VdnRY6_40111	1	1	6	26	uv|GU827641.1:1944-2103	75	95	Moderate	Moderate	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061489 (LOC107061489), ncRNA	9.090909091
VdnRY6_40111	1	1	1	19	uv|GU827641.1:1944-2103	76	94	Moderate	Moderate	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061489 (LOC107061489), ncRNA	8.181818182
CLCdnRY1_45937	1	1	184	200	uv|KF680545.1:1-2837	2564	2548	Weak	Weak	Suspect[201,220];	NO_DATA	1	1	Homo sapiens BAC clone CH17-148E21 from chromosome unknown, complete sequence	7.272727273
CLCdnRY11_30129	1	1	190	206	uv|U13864.1:2748-4229-44	1051	1035	Weak	Weak	Suspect[207,220];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585256 (LOC102585256), transcript variant X2, ncRNA	7.272727273
CLCdnRY7_64210	1	1	203	219	uv|JN581374.1:3097-3496	207	223	Weak	Weak	Suspect[220,220];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 1	7.272727273
CLCdnRY10_63043	1	1	23	38	uv|KC702201.1:1-1023	899	884	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 7	6.818181818
CLCdnRY10_70872	1	1	190	205	uv|U42373.1:2529-2868	102	117	Weak	Weak	Suspect[206,220];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 5	6.818181818
CLCdnRY11_88381	1	1	191	206	uv|JX560377.2:202-397	76	61	Weak	Weak	Suspect[207,220];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	6.818181818
CLCdnRY1_41153	1	1	20	35	uv|GU339048.1:3458-3555	7	22	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.818181818
CLCdnRY1_41153	1	1	21	36	uv|U13188.1:5438-5534	35	50	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.818181818
CLCdnRY4_40693	1	1	19	34	uv|AF379854.1:3-2710	1890	1905	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	PREDICTED: Solanum pennellii probable sodium-coupled neutral amino acid transporter 6 (LOC107018489), mRNA	6.818181818
CLCdnRY4_8761	1	1	14	29	uv|U89960.1:4738-7717	507	492	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum pennellii uncharacterized LOC107023032 (LOC107023032), ncRNA	6.818181818
SdnRY1_96389	1	1	2	17	uv|JX560334.1:1968-3342	1118	1103	Weak	Weak	Suspect[1,1];	NO_DATA	1	1		6.818181818
VdnRY1_18832	1	1	19	34	uv|AF102576.1:10832-10921	51	66	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 1	6.818181818
VdnRY2_68728	1	1	188	203	uv|JX573201.1:3249-3345	20	5	Weak	Weak	Suspect[204,220];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604540 (LOC102604540), mRNA	6.818181818
CLCdnRY5_10284	1	1	82	134	uv|KF719004.1:2204-2946	113	61	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	S.tuberosum rbcS2c gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	23.74429224
SdnRY1_96460	1	1	22	41	uv|D10357.1:253-396	22	3	Moderate	Moderate	Suspect[1,21];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589654 (LOC102589654), mRNA	8.675799087
CLCdnRY10_76366	1	1	198	213	uv|L05081.1:2594-3343	357	372	Weak	Weak	Suspect[214,219];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein PAF1 homolog (LOC102605929), transcript variant X5, mRNA	6.849315068
SdnRY1_96649	1	1	204	219	uv|U02437.1:1761-2026	137	152	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor 1B-like (LOC102592973), mRNA	6.849315068
CLCdnRY10_72689	1	1	10	25	uv|L08862.1:2848-3728-49	271	286	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum BTB/POZ domain-containing protein NPY4-like (LOC102587555), transcript variant X1, mRNA	6.849315068
CLCdnRY4_42450	1	1	12	27	uv|FJ931533.1:7978-12753-49	1693	1678	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum GRF1-interacting factor 2-like (LOC102582966), mRNA	6.849315068
VdnRY2_42587	1	1	7	22	uv|M13163.1:477-1287	212	227	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	Solanum lycopersicum chromosome ch05, complete genome	6.849315068
CLCdnRY11_14268	1	1	61	101	uv|KF719004.1:2204-2946	113	73	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	18.34862385
CLCdnRY12_50063	1	1	200	217	uv|KC702178.1:1-2022	28	45	Weak	Weak	Suspect[218,218];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum putative pentatricopeptide repeat-containing protein At3g11460 (LOC102589077), mRNA	7.798165138
CLCdnRY10_69125	1	1	181	196	uv|Z46234.1:4844-5692	116	101	Weak	Weak	Suspect[197,218];	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum uncharacterized LOC107058989 (LOC107058989), ncRNA	6.880733945
CLCdnRY4_68121	1	1	181	196	uv|Z46234.1:4844-5692	116	101	Weak	Weak	Suspect[197,218];	TRUE_BIOLOGICAL	460517	1	PREDICTED: Solanum tuberosum uncharacterized LOC107058989 (LOC107058989), ncRNA	6.880733945
CLCdnRY7_52367	1	1	179	194	uv|JX025642.1:7290-7461	87	102	Weak	Weak	Suspect[195,218];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	6.880733945
VdnRY1_113115	1	1	184	200	uv|AY568055.1:6692-7837	433	417	Weak	Weak	Suspect[201,217];	NO_DATA	1	1		7.373271889
CLCdnRY12_89558	1	1	14	29	uv|KC702178.1:1-2022	1983	1998	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	196118	1		6.912442396
CLCdnRY1_49450	1	1	200	215	uv|KF853602.1:1019-2932	1859	1844	Weak	Weak	Suspect[216,217];	TRUE_BIOLOGICAL	7711	1		6.912442396
CLCdnRY8_37782	1	1	2	17	uv|AY962893.1:8266-9065	217	232	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	29487	1	PREDICTED: Solanum lycopersicum cysteine protease ATG4 (LOC101249673), transcript variant X1, mRNA	6.912442396
VdnRY4_40864	1	1	12	27	uv|KC702183.1:1-1023	132	147	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable galacturonosyltransferase 4 (LOC102590887), transcript variant X5, mRNA	6.912442396
SdnRY1_97101	1	1	114	166	uv|KF719004.1:2204-2946	61	113	Moderate	Moderate	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	24.07407407
CLCdnRY11_89254	1	1	11	26	uv|EF437940.1:7199-10690-48	646	631	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	Solanum bulbocastanum BAC 27I18, complete sequence	6.944444444
CLCdnRY7_39244	1	1	16	31	uv|AY568055.1:6692-7837	716	731	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	Homo sapiens genomic DNA, chromosome 11 clone:RP11-629D8, complete sequence	6.944444444
VdnRY1_64775	1	1	190	205	uv|LC029925.1:8127-8336	156	171	Weak	Weak	Suspect[206,216];	NO_DATA	1	1		6.944444444
VdnRY1_64776	1	1	190	205	uv|LC029925.1:8127-8336	156	171	Weak	Weak	Suspect[206,216];	NO_DATA	1	1		6.944444444
VdnRY2_15541	1	1	195	210	uv|KC702214.1:1-1136	1039	1054	Weak	Weak	Suspect[211,216];	TRUE_ARTIFICIAL	81077	81077	Sphingomonas sp. LM7, complete genome	6.944444444
CLCdnRY1_46535	1	1	16	31	uv|JX560397.1:83-5970	4258	4243	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	1236	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor ERF061 (LOC102590166), mRNA	6.944444444
CLCdnRY1_50707	1	1	17	32	uv|KM407512.1:886-4985	328	313	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum putative pentatricopeptide repeat-containing protein At3g15130 (LOC102586601), transcript variant X2, misc_RNA	6.944444444
CLCdnRY1_46380	1	1	20	38	uv|KF853602.1:1019-2932	646	664	Moderate	Moderate	Suspect[1,19];	TRUE_BIOLOGICAL	7711	1	Solanum lycopersicum cultivar I-3 chromosome 2	8.372093023
CLCdnRY2_58603	1	1	29	45	uv|EF694056.1:1-945	673	657	None	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	33090	1		7.441860465
CLCdnRY2_63910	1	1	10	26	uv|AF379854.1:4263-5841	74	90	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	5820	1	Solanum pennellii chromosome ch03, complete genome	7.441860465
CLCdnRY10_72422	1	1	4	20	uv|GU593055.1:13024-13902-49	704	688	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	2132	1	Solanum pennellii chromosome ch05, complete genome	7.441860465
VdnRY1_124588	1	1	25	41	uv|EF216317.1:4114-4928	112	96	Weak	Weak	Suspect[1,24];Suspect[213,215];	NO_DATA	1	1	PREDICTED: Solanum tuberosum gibberellin-regulated protein 6 (LOC102600781), mRNA	7.441860465
VdnRY1_124588	1	1	196	212	uv|L08860.1:1-1129	187	203	Weak	Weak	Suspect[1,24];Suspect[213,215];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum gibberellin-regulated protein 6 (LOC102600781), mRNA	7.441860465
CLCdnRY12_84937	1	1	185	200	uv|KC702178.1:1-2022	1244	1229	Weak	Weak	Suspect[201,215];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum DNA repair helicase UVH6 (LOC102581333), transcript variant X1, mRNA	6.976744186
CLCdnRY1_53604	1	1	14	29	uv|KF718979.1:2206-6730	1776	1791	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 8	6.976744186
CLCdnRY2_58603	1	1	22	37	uv|X53127.1:443-904	292	277	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	6237	1		6.976744186
CLCdnRY3_70678	1	1	16	31	uv|X70481.1:3564-4492	333	318	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum pyrophosphate-energized vacuolar membrane proton pump-like (LOC102579479), mRNA	6.976744186
CLCdnRY11_81583	1	1	81	106	uv|U14124.1:1-466	300	325	Moderate	Moderate	None	TRUE_BIOLOGICAL	4892	1	Bipolaris cookei strain LSLP18 mitochondrion, complete genome	11.68224299
CLCdnRY11_82901	1	1	195	213	uv|GU593054.1:1-1305	1127	1145	Moderate	Moderate	Suspect[214,214];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum serine carboxypeptidase II-3-like (LOC102605170), mRNA	8.411214953
CLCdnRY10_8052	1	1	11	28	uv|JF909482.1:3850-8059	4064	4047	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum protein DEHYDRATION-INDUCED 19 homolog 4-like (LOC102578393), mRNA	7.943925234
CLCdnRY8_3996	1	1	32	48	uv|U29899.1:1847-4463	502	486	None	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597556 (LOC102597556), transcript variant X2, mRNA	7.476635514
VdnRY1_72100	1	1	180	196	uv|AF310136.1:497-2034	1233	1217	Weak	Weak	Suspect[1,2];Suspect[197,214];	TRUE_BIOLOGICAL	91347	1	Solanum lycopersicum chromosome ch05, complete genome	7.476635514
CLCdnRY11_41257	1	1	5	20	uv|JF909482.1:3850-8059	3393	3378	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	3701	1	Solanum tuberosum chromosome 11 clone RH052D21, complete sequence	7.009345794
CLCdnRY8_3996	1	1	23	38	uv|GU593054.1:6136-8806	168	183	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	2132	1	PREDICTED: Solanum tuberosum uncharacterized LOC102597556 (LOC102597556), transcript variant X2, mRNA	7.009345794
VdnRY1_72100	1	1	3	18	uv|KC702217.1:1-1119	70	55	Weak	Weak	Suspect[1,2];Suspect[197,214];	NO_DATA	1	1	Solanum lycopersicum chromosome ch05, complete genome	7.009345794
VdnRY2_34306	1	1	180	195	uv|U47626.2:2785-2880	59	44	Weak	Weak	Suspect[196,214];	NO_DATA	1	1	PREDICTED: Solanum tuberosum muscle M-line assembly protein unc-89 (LOC102605879), mRNA	7.009345794
CLCdnRY11_45464	1	1	184	199	uv|KY031734.1:1-4625	691	676	Weak	Weak	Suspect[200,214];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum protein NLP9-like (LOC102596781), mRNA	7.009345794
CLCdnRY3_42078	1	1	1	16	uv|GU593054.1:6136-8806	1325	1310	Weak	Weak	None	NO_DATA	1	1	Solanum pennellii chromosome ch10, complete genome	7.009345794
CLCdnRY3_66033	1	1	9	24	uv|L08860.1:1-1129	578	593	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 5	7.009345794
CLCdnRY6_47775	1	1	176	191	uv|AF379854.1:3-2710	439	424	Weak	Weak	Suspect[192,214];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum ubiquitin-like protein ATG12 (LOC102587445), transcript variant X2, mRNA	7.009345794
CLCdnRY6_53248	1	1	5	20	uv|JF909482.1:3850-8059	3393	3378	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	3701	1	Solanum tuberosum chromosome 11 clone RH052D21, complete sequence	7.009345794
CLCdnRY7_32548	1	1	176	191	uv|U35128.1:2667-2762	19	4	Weak	Weak	Suspect[192,214];	TRUE_BIOLOGICAL	10663	1	PREDICTED: Solanum tuberosum uncharacterized LOC102580851 (LOC102580851), transcript variant X5, ncRNA	7.009345794
CLCdnRY9_68178	1	1	9	24	uv|L08860.1:1-1129	578	593	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 5	7.009345794
VdnRY3_92866	1	1	186	207	uv|JN204899.1:1-109	53	32	Weak	Weak	Suspect[208,213];	TRUE_BIOLOGICAL	118139	1	PREDICTED: Solanum pennellii transcription factor VOZ1 (LOC107002528), transcript variant X2, mRNA	9.85915493
CLCdnRY2_49524	1	1	190	207	uv|J02400.1:1-5243-49	3895	3912	Weak	Weak	Suspect[208,213];	TRUE_BIOLOGICAL	151341	1		7.981220657
VdnRY3_73381	1	1	22	39	uv|D13749.1:470-683	28	45	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	151341	1	Solanum lycopersicum cultivar I-3 chromosome 11	7.981220657
CLCdnRY3_77419	1	1	187	204	uv|KM407508.1:3392-3619	108	125	Weak	Weak	Suspect[205,213];	TRUE_ARTIFICIAL	81077	81077		7.981220657
CLCdnRY7_55034	1	1	4	20	uv|GU593055.1:13024-13902-49	704	688	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	2132	1	Solanum pennellii chromosome ch05, complete genome	7.511737089
CLCdnRY10_81849	1	1	7	22	uv|KC702237.1:1-1024	700	685	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 11	7.042253521
CLCdnRY12_74989	1	1	180	195	uv|M16217.1:3121-3879-49	347	332	Weak	Weak	Suspect[198,213];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587884 (LOC102587884), ncRNA	7.042253521
CLCdnRY12_74989	1	1	182	197	uv|U89932.1:553-1856	1125	1140	Weak	Weak	Suspect[198,213];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587884 (LOC102587884), ncRNA	7.042253521
SdnRY1_97801	1	1	190	205	uv|M29589.1:1-173	21	6	Weak	Weak	Suspect[206,213];	NO_DATA	1	1	Solanum pennellii chromosome ch06, complete genome	7.042253521
CLCdnRY2_49313	1	1	1	16	uv|U13860.1:6124-7626-49	1405	1420	Weak	Weak	None	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 6	7.042253521
CLCdnRY7_51185	1	1	25	43	uv|KF853602.1:1019-2932	646	664	Moderate	Moderate	Suspect[1,24];	TRUE_BIOLOGICAL	7711	1	Solanum pennellii chromosome ch05, complete genome	8.490566038
SdnRY1_98126	1	1	6	24	uv|U47120.2:791-908	50	68	Moderate	Moderate	Suspect[1,5];	NO_DATA	1	1	Uncultured eukaryote clone F5K2Q4C04I61RX 28S ribosomal RNA gene, partial sequence	8.490566038
CLCdnRY10_57155	1	1	2	19	uv|M77169.1:820-5161	3145	3128	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum serine/arginine-rich splicing factor RS31-like (LOC102590704), transcript variant X4, mRNA	8.018867925
CLCdnRY10_76634	1	1	189	206	uv|KC702202.1:1-1020	317	300	Weak	Weak	Suspect[207,212];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch02, complete genome	8.018867925
CLCdnRY12_69266	1	1	21	37	uv|AJ007829.1:2020-2117	41	57	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102590140 (LOC102590140), mRNA	7.547169811
CLCdnRY12_73368	1	1	193	209	uv|KC702183.1:1-1023	791	775	Weak	Weak	Suspect[210,212];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum VQ motif-containing protein 4-like (LOC102586813), mRNA	7.547169811
CLCdnRY12_84592	1	1	196	211	uv|KF719005.1:2205-5132	1151	1166	Weak	Weak	Suspect[212,212];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch04, complete genome	7.075471698
CLCdnRY2_53418	1	1	7	22	uv|DQ391279.1:1-10285	6371	6356	Weak	Weak	Suspect[1,6];	NO_DATA	1	1		7.075471698
CLCdnRY9_66934	1	1	173	188	uv|U13189.1:9688-10585	755	770	Weak	Weak	Suspect[189,212];	NO_DATA	1	1		7.075471698
SdnRY1_98012	1	1	195	210	uv|JN874481.1:57-2095	583	568	Weak	Weak	Suspect[211,212];	TRUE_BIOLOGICAL	3705	1	Solanum lycopersicum cultivar I-3 chromosome 5	7.075471698
CLCdnRY10_79518	1	1	23	38	uv|AF078810.1:1718-2095	357	372	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	Solanum pennellii chromosome ch12, complete genome	7.075471698
CLCdnRY12_27875	1	1	22	37	uv|KC847296.1:1602-2043	368	383	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum neurogenic protein mastermind (LOC102584691), mRNA	7.075471698
CLCdnRY1_39036	1	1	173	188	uv|J02459.1:1-48502-49	41902	41887	Weak	Weak	Suspect[189,212];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch04, complete genome	7.075471698
CLCdnRY1_50622	1	1	18	33	uv|NGB00587.1:1-3232	1997	1982	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 11	7.075471698
CLCdnRY6_85961	1	1	196	211	uv|KF719005.1:2205-5132	1151	1166	Weak	Weak	Suspect[212,212];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch04, complete genome	7.075471698
CLCdnRY8_41471	1	1	173	188	uv|J02459.1:1-48502-49	41902	41887	Weak	Weak	Suspect[189,212];	TRUE_BIOLOGICAL	10699	1	Solanum pennellii chromosome ch04, complete genome	7.075471698
VdnRY1_35639	1	1	173	188	uv|U51223.1:996-1093	74	59	Weak	Weak	Suspect[189,212];	TRUE_BIOLOGICAL	4930	1		7.075471698
VdnRY2_113716	1	1	183	198	uv|JF909482.1:3850-8059	1455	1440	Weak	Weak	Suspect[199,212];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum dynamin-related protein 3A-like (LOC102589822), transcript variant X2, mRNA	7.075471698
CLCdnRY12_42899	1	1	179	200	uv|L08862.1:2848-3728-49	409	388	Weak	Weak	Suspect[201,211];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	9.952606635
VdnRY2_95852	1	1	174	192	uv|M77169.1:820-5161	3125	3143	Moderate	Moderate	Suspect[193,211];	TRUE_BIOLOGICAL	1485	1	Solanum lycopersicum cultivar I-3 chromosome 6	8.530805687
CLCdnRY10_44283	1	1	20	37	uv|U59231.1:5103-7490	2014	1997	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	5658	1	Solanum tuberosum clone RH201H22, complete sequence	8.056872038
CLCdnRY11_88867	1	1	183	200	uv|KM407505.1:939-2365	470	487	Weak	Weak	Suspect[201,211];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch04, complete genome	8.056872038
VdnRY5_61796	1	1	25	41	uv|AF379854.1:3-2710	2611	2595	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum mitochondrial inner membrane protein OXA1-like (LOC102588541), mRNA	7.582938389
CLCdnRY11_88867	1	1	180	195	uv|KF680545.1:1-2837	668	683	Weak	Weak	Suspect[201,211];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	7.109004739
CLCdnRY12_88439	1	1	187	202	uv|DQ391279.1:1-10285	3595	3580	Weak	Weak	Suspect[203,211];	TRUE_BIOLOGICAL	308911	1	Solanum lycopersicum cultivar I-3 chromosome 9	7.109004739
CLCdnRY1_52845	1	1	196	211	uv|KC702204.1:1-521	17	2	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch02, complete genome	7.109004739
CLCdnRY10_78296	1	1	18	33	uv|KF718979.1:2206-6730	1416	1431	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	3701	1		7.109004739
CLCdnRY11_79539	1	1	173	188	uv|GU593054.1:1-1305	598	613	Weak	Weak	Suspect[189,211];	TRUE_BIOLOGICAL	1279	1		7.109004739
CLCdnRY1_14588	1	1	18	33	uv|NGB00051.1:1428-2848	771	786	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579594 (LOC102579594), transcript variant X2, mRNA	7.109004739
CLCdnRY4_19448	1	1	8	23	uv|U09128.1:3334-10218	5043	5028	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum glutamate dehydrogenase A (LOC102599312), mRNA	7.109004739
CLCdnRY5_45619	1	1	20	35	uv|KF718979.1:2206-6730	1401	1386	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g25630-like (LOC102578994), transcript variant X2, mRNA	7.109004739
CLCdnRY7_7421	1	1	15	30	uv|L05669.1:1-1770	237	252	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum protein FATTY ACID EXPORT 5 (LOC102584920), mRNA	7.109004739
VdnRY1_140690	1	1	182	197	uv|L05669.1:1-1770	252	237	Weak	Weak	Suspect[198,211];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum protein FATTY ACID EXPORT 5 (LOC102584920), mRNA	7.109004739
VdnRY2_103388	1	1	183	198	uv|KC702183.1:1-1023	85	70	Weak	Weak	Suspect[199,211];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch12, complete genome	7.109004739
VdnRY4_19788	1	1	186	201	uv|AY568055.1:6692-7837	92	107	Weak	Weak	Suspect[202,211];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102585981 (LOC102585981), transcript variant X2, mRNA	7.109004739
VdnRY4_59496	1	1	7	22	uv|NGB00587.1:1-3232	2872	2857	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum ras-related protein RABA2a-like (LOC102604566), mRNA	7.109004739
VdnRY5_34025	1	1	176	191	uv|GU339053.1:3669-3764	38	23	Weak	Weak	Suspect[192,211];	NO_DATA	1	1	PREDICTED: Solanum tuberosum monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic (LOC102586687), transcript variant X2, mRNA	7.109004739
CLCdnRY3_75438	1	1	14	31	uv|L08934.1:171-1487	230	247	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579777 (LOC102579777), transcript variant X9, ncRNA	8.095238095
CLCdnRY10_85627	1	1	191	207	uv|KF718979.1:2206-6730	1108	1124	Weak	Weak	Suspect[208,210];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch05, complete genome	7.619047619
CLCdnRY1_13905	1	1	9	25	uv|J02482.1:1-5386-49	503	519	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	10842	1	PREDICTED: Solanum tuberosum probable protein phosphatase 2C 11 (LOC102603883), transcript variant X2, mRNA	7.619047619
VdnRY3_87154	1	1	176	192	uv|M34305.1:3197-4538	701	717	Weak	Weak	Suspect[193,210];	TRUE_BIOLOGICAL	6237	1	Solanum pennellii chromosome ch07, complete genome	7.619047619
CLCdnRY11_12615	1	1	7	22	uv|JX560397.1:83-5970	5361	5376	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	29487	1	Solanum tuberosum mitochondrial outer membrane protein porin of 34 kDa-like (VDAC), mRNA<>S.tuberosum pPOM34 mRNA for mitochondrial 34kDa porin	7.142857143
CLCdnRY7_24436	1	1	8	23	uv|KF718979.1:2206-6730	3107	3092	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	3701	1	Solanum tuberosum chromosome 7 clone RHPOTKEY159J14, complete sequence	7.142857143
VdnRY3_98863	1	1	171	186	uv|KM407512.1:886-4985	2576	2561	Weak	Weak	Suspect[187,210];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probable calcium-binding protein CML36 (LOC102595230), mRNA	7.142857143
CLCdnRY3_52133	1	1	23	38	uv|EF442786.1:5501-5600	62	77	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	PREDICTED: Solanum tuberosum beta-D-glucosyl crocetin beta-1,6-glucosyltransferase-like (LOC107061899), partial mRNA	7.142857143
CLCdnRY3_68936	1	1	18	33	uv|KF718979.1:2206-6730	1416	1431	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	3701	1		7.142857143
CLCdnRY5_29911	1	1	19	34	uv|KC702198.1:1-1023	666	681	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum pennellii leucine-rich repeat extensin-like protein 4 (LOC107007167), mRNA	7.142857143
VdnRY2_122608	1	1	191	206	uv|U64448.1:417-935	196	181	Weak	Weak	Suspect[207,210];	TRUE_BIOLOGICAL	10358	1	PREDICTED: Solanum tuberosum oxalate--CoA ligase-like (LOC102593155), mRNA	7.142857143
CLCdnRY11_86423	1	1	21	37	uv|U02428.1:505-795	214	230	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	151341	1		7.655502392
CLCdnRY12_93351	1	1	15	31	uv|DQ666274.1:249-3225	2733	2749	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	1386	1		7.655502392
VdnRY1_43142	1	1	2	17	uv|HM162834.1:358-1197	708	723	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	6074	1	Solanum lycopersicum cultivar I-3 chromosome 10	7.177033493
VdnRY4_58570	1	1	2	17	uv|M20189.1:2170-2332	84	99	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum ethylene-responsive transcription factor CRF4 (LOC102591238), mRNA	7.177033493
VdnRY5_13932	1	1	186	201	uv|AF151088.1:607-1233	113	128	Weak	Weak	Suspect[202,209];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum jmjC domain-containing protein 7 (LOC101250242), mRNA	7.177033493
CLCdnRY10_63367	1	1	15	30	uv|X06779.1:1-4734	843	858	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum tuberosum calmodulin-binding receptor-like cytoplasmic kinase 2 (LOC102603218), mRNA	7.177033493
CLCdnRY11_77654	1	1	12	27	uv|GU593055.1:13024-13902-49	659	674	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	2132	1	Solanum pennellii chromosome ch03, complete genome	7.177033493
CLCdnRY4_52209	1	1	193	208	uv|U89671.1:1-253	77	92	Weak	Weak	Suspect[209,209];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum ras-related protein RABA5a (LOC102592472), transcript variant X3, mRNA	7.177033493
CLCdnRY4_55542	1	1	7	22	uv|EF216317.1:1966-2681	194	209	Weak	Weak	Suspect[1,6];	NO_DATA	1	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase RMA3-like (LOC102595619), mRNA	7.177033493
CLCdnRY8_23093	1	1	20	37	uv|KC702209.1:1-2022	193	176	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable Xaa-Pro aminopeptidase P (LOC102582935), transcript variant X5, misc_RNA	8.173076923
CLCdnRY10_70019	1	1	23	40	uv|JN581374.1:616-2149	1341	1324	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch05, complete genome	8.173076923
CLCdnRY10_82464	1	1	181	197	uv|KF718979.1:2206-6730	3975	3991	Weak	Weak	Suspect[198,208];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum transcription factor bHLH93-like (LOC102597520), mRNA	7.692307692
CLCdnRY8_63992	1	1	1	17	uv|AF379854.1:4263-5841	681	697	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	Solanum lycopersicum cultivar I-3 chromosome 3	7.692307692
CLCdnRY10_55435	1	1	21	37	uv|X13003.1:2753-4028	617	633	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	561	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g65560-like (LOC102592649), transcript variant X3, mRNA	7.692307692
VdnRY5_43007	1	1	22	38	uv|AF379854.1:3-2710	2611	2595	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum mitochondrial inner membrane protein OXA1-like (LOC102588541), mRNA	7.692307692
CLCdnRY11_88876	1	1	8	23	uv|KC702192.1:1-523	198	183	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	196118	1		7.211538462
CLCdnRY2_28227	1	1	188	203	uv|J01636.1:1-7477	928	943	Weak	Weak	Suspect[204,208];	NO_DATA	1	1	PREDICTED: Solanum tuberosum succinate dehydrogenase subunit 5, mitochondrial-like (LOC102602567), transcript variant X5, mRNA	7.211538462
CLCdnRY10_60976	1	1	179	194	uv|JN581374.1:616-2149	343	358	Weak	Weak	Suspect[195,208];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578183 (LOC102578183), transcript variant X4, mRNA	7.211538462
CLCdnRY10_60976	1	1	167	182	uv|JQ437370.1:1915-3110-49	875	890	None	Weak	Suspect[195,208];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578183 (LOC102578183), transcript variant X4, mRNA	7.211538462
CLCdnRY10_79526	1	1	190	205	uv|JN204883.1:1-1492	537	552	Weak	Weak	Suspect[206,208];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 7	7.211538462
CLCdnRY11_76631	1	1	22	37	uv|U67875.1:6278-6481	90	75	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	4892	1	Solanum pennellii chromosome ch07, complete genome	7.211538462
VdnRY1_60080	1	1	8	23	uv|JQ927446.1:4885-6835-49	218	233	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 4	7.211538462
VdnRY2_57163	1	1	8	23	uv|JQ927446.1:4885-6835-49	218	233	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 4	7.211538462
VdnRY1_44870	1	1	11	27	uv|KC702217.1:1-1119	26	42	Weak	Weak	Suspect[1,10];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ycf20-like protein (LOC102602176), transcript variant X2, mRNA	7.729468599
CLCdnRY11_5788	1	1	188	204	uv|U03463.1:2202-2302	92	76	Weak	Weak	Suspect[205,207];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum perakine reductase-like (LOC102596959), mRNA	7.729468599
CLCdnRY12_86837	1	1	5	21	uv|U02436.1:3152-4436	382	398	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum lycopersicum subtilisin-like protease SBT5.6 (LOC101252948), mRNA	7.729468599
CLCdnRY5_5406	1	1	188	204	uv|U03463.1:2202-2302	92	76	Weak	Weak	Suspect[205,207];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum perakine reductase-like (LOC102596959), mRNA	7.729468599
CLCdnRY5_34874	1	1	19	35	uv|NGB00055.1:4046-4803	600	616	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum LETM1 and EF-hand domain-containing protein 1, mitochondrial (LOC102600829), mRNA	7.729468599
CLCdnRY12_55842	1	1	13	28	uv|DQ883689.3:1-1994	306	321	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum auxin-responsive protein IAA27-like (LOC102595402), mRNA	7.246376812
CLCdnRY1_43803	1	1	178	193	uv|AY487253.1:9202-9300	23	38	Weak	Weak	Suspect[194,207];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 7	7.246376812
CLCdnRY8_60220	1	1	20	35	uv|KC614689.1:4213-4921	611	626	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 1	7.246376812
CLCdnRY7_65974	1	1	178	193	uv|AY487253.1:9202-9300	23	38	Weak	Weak	Suspect[194,207];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 7	7.246376812
SdnRY1_99096	1	1	6	21	uv|KY031735.1:1-4680	3210	3195	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum ATP-dependent helicase rhp16-like (LOC102590390), mRNA	7.246376812
CLCdnRY12_86088	1	1	3	19	uv|EU360889.1:4417-6776-46	1926	1942	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	7.766990291
CLCdnRY5_42482	1	1	172	188	uv|NGB00055.1:4046-4803	616	600	Weak	Weak	Suspect[189,206];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum tuberosum LETM1 and EF-hand domain-containing protein 1, mitochondrial (LOC102600829), mRNA	7.766990291
VdnRY2_30003	1	1	168	184	uv|KF719005.1:2205-5132	1812	1796	Weak	Weak	Suspect[185,206];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum FKBP12-interacting protein of 37 kDa (LOC102602351), mRNA	7.766990291
CLCdnRY10_4656	1	1	184	199	uv|AY568055.1:6692-7837	199	214	Weak	Weak	Suspect[200,206];	NO_DATA	1	1	Solanum chacoense Rac-like GTP-binding protein (RAC1) mRNA, complete cds	7.281553398
CLCdnRY10_85050	1	1	187	202	uv|AY568055.1:6692-7837	428	413	Weak	Weak	Suspect[203,206];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 2	7.281553398
CLCdnRY11_7243	1	1	174	189	uv|KC702237.1:1-1024	248	263	Weak	Weak	Suspect[190,206];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 7	7.281553398
VdnRY3_62056	1	1	178	193	uv|KF718979.1:2206-6730	1381	1396	Weak	Weak	Suspect[194,206];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 1	7.281553398
SdnRY1_99762	1	1	163	181	uv|JF909482.1:3850-8059	1112	1094	Moderate	Moderate	Suspect[182,205];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum lycopersicum pentatricopeptide repeat-containing protein At5g39710 (LOC101261764), transcript variant X23, mRNA	8.780487805
CLCdnRY8_18746	1	1	6	22	uv|JX310867.1:868-3760	2133	2149	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	1224	1	PREDICTED: Solanum tuberosum UPF0481 protein At3g47200-like (LOC102603622), mRNA	7.804878049
CLCdnRY1_42738	1	1	2	18	uv|J02459.1:1-48502-49	9749	9733	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum histone-lysine N-methyltransferase ASHH2 (LOC102599524), transcript variant X2, mRNA	7.804878049
CLCdnRY10_44386	1	1	169	184	uv|KF718980.1:2204-2384	118	103	Weak	Weak	Suspect[185,205];	TRUE_BIOLOGICAL	10639	1		7.317073171
CLCdnRY1_43619	1	1	19	34	uv|L05669.1:5948-6104	156	141	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 2	7.317073171
CLCdnRY1_42610	1	1	182	197	uv|JF909478.1:3849-4965	580	565	Weak	Weak	Suspect[198,205];	TRUE_BIOLOGICAL	10639	1	PREDICTED: Solanum tuberosum alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 (LOC102588468), transcript variant X1, mRNA	7.317073171
CLCdnRY3_40963	1	1	8	23	uv|KC702231.1:1-1021	918	903	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	196118	1	Solanum tuberosum 3-hydroxy-3-methylglutaryl coenzyme A reductase mRNA, partial cds	7.317073171
CLCdnRY3_42829	1	1	184	199	uv|GU593054.1:1-1305	56	71	Weak	Weak	Suspect[200,205];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 6	7.317073171
SdnRY1_99771	1	1	114	154	uv|KF719004.1:2204-2946	73	113	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	19.60784314
VdnRY4_61093	1	1	4	24	uv|NGB00413.1:1-3960	237	217	Moderate	Moderate	Suspect[1,3];	TRUE_BIOLOGICAL	12103	1	PREDICTED: Solanum tuberosum protein DETOXIFICATION 40-like (LOC102593891), transcript variant X1, mRNA	9.803921569
CLCdnRY10_9930	1	1	162	181	uv|KC702201.1:1-1023	880	899	Moderate	Moderate	Suspect[182,204];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum tubby-like F-box protein 6 (LOC102589959), transcript variant X2, mRNA	9.31372549
SdnRY1_99913	1	1	165	183	uv|U67875.1:8796-9922	524	506	Moderate	Moderate	Suspect[184,204];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum tuberosum uncharacterized LOC107059134 (LOC107059134), ncRNA	8.823529412
CLCdnRY3_59591	1	1	168	184	uv|HM640258.1:317-2913	1785	1769	Weak	Weak	Suspect[185,204];	TRUE_BIOLOGICAL	5073	1	Solanum pennellii chromosome ch06, complete genome	7.843137255
CLCdnRY1_40004	1	1	2	18	uv|DQ391279.1:1-10285	7963	7979	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	PREDICTED: Solanum tuberosum transcription factor TCP20 (LOC102586089), mRNA	7.843137255
CLCdnRY9_61581	1	1	168	184	uv|HM640258.1:317-2913	1785	1769	Weak	Weak	Suspect[185,204];	TRUE_BIOLOGICAL	5073	1	Solanum lycopersicum cultivar I-3 chromosome 4	7.843137255
CLCdnRY1_60175	1	1	174	189	uv|JN381160.1:2018-4126	1126	1111	Weak	Weak	Suspect[190,204];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	7.352941176
SdnRY1_99813	1	1	5	20	uv|U89928.1:1-102	61	76	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch02, complete genome	7.352941176
CLCdnRY1_32562	1	1	183	198	uv|AY508731.1:12-109	40	25	Weak	Weak	Suspect[199,204];	NO_DATA	1	1	PREDICTED: Solanum tuberosum photosystem II 5 kDa protein, chloroplastic-like (LOC102602387), mRNA	7.352941176
CLCdnRY4_19449	1	1	173	188	uv|U09128.1:3334-10218	5028	5043	Weak	Weak	Suspect[189,204];	TRUE_BIOLOGICAL	91347	1	Solanum lycopersicum cultivar I-3 chromosome 3	7.352941176
CLCdnRY9_1370	1	1	160	181	uv|DQ666273.1:28-245	118	139	Moderate	Moderate	Suspect[182,203];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum calvin cycle protein CP12-1, chloroplastic (LOC102594918), mRNA	10.34482759
CLCdnRY4_9320	1	1	161	180	uv|KC702201.1:1-1023	880	899	Moderate	Moderate	Suspect[181,203];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum tubby-like F-box protein 6 (LOC102589959), transcript variant X2, mRNA	9.359605911
CLCdnRY7_66476	1	1	183	201	uv|X70481.1:3564-4492	308	326	Moderate	Moderate	Suspect[202,203];	TRUE_BIOLOGICAL	4930	1		8.866995074
CLCdnRY11_23190	1	1	4	21	uv|JN874480.1:1050-2714	496	513	Weak	Weak	Suspect[1,3];Suspect[192,203];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum solute carrier family 25 member 44 (LOC102579058), mRNA	8.374384236
CLCdnRY7_50211	1	1	184	201	uv|KC702208.1:1-1350	9	26	Weak	Weak	Suspect[202,203];	TRUE_BIOLOGICAL	1386	1		8.374384236
CLCdnRY11_23190	1	1	175	191	uv|KM407512.1:886-4985	1151	1135	Weak	Weak	Suspect[1,3];Suspect[192,203];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum solute carrier family 25 member 44 (LOC102579058), mRNA	7.881773399
CLCdnRY11_59604	1	1	1	16	uv|U89671.1:1-253	80	95	Weak	Weak	None	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 (LOC102596443), mRNA	7.389162562
CLCdnRY12_82129	1	1	187	202	uv|NGB00051.1:1428-2848	786	771	Weak	Weak	Suspect[203,203];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579594 (LOC102579594), transcript variant X2, mRNA	7.389162562
VdnRY1_38901	1	1	167	182	uv|EU546815.1:1997-2088	81	66	Weak	Weak	Suspect[183,203];	TRUE_BIOLOGICAL	28883	1	PREDICTED: Solanum tuberosum putative U-box domain-containing protein 50 (LOC102583320), mRNA	7.389162562
CLCdnRY7_48922	1	1	1	18	uv|AF379854.1:3-2710	1682	1699	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	Solanum pennellii chromosome ch07, complete genome	8.415841584
VdnRY3_62298	1	1	184	201	uv|Z46234.1:664-3443	2588	2571	Weak	Weak	Suspect[202,202];	TRUE_BIOLOGICAL	4892	1	Solanum lycopersicum cultivar I-3 chromosome 12	8.415841584
SdnRY1_100284	1	1	24	40	uv|AF061923.1:29-1852	867	883	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum linoleate 9S-lipoxygenase 5, chloroplastic-like (LOC102586366), mRNA	7.920792079
SdnRY1_100511	1	1	4	20	uv|L08862.1:2848-3728-49	378	394	Weak	Weak	Suspect[1,3];	NO_DATA	1	1	PREDICTED: Nicotiana tabacum uncharacterized LOC107832529 (LOC107832529), mRNA	7.920792079
VdnRY3_98527	1	1	18	34	uv|KM407512.1:886-4985	3378	3362	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	4930	1	Solanum tuberosum clone BAC BC58I22 sequence	7.920792079
CLCdnRY11_90260	1	1	5	20	uv|KC702208.1:1-1350	215	230	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	1386	1		7.425742574
SdnRY1_100281	1	1	187	202	uv|U13860.1:6124-7626-49	527	512	Weak	Weak	None	TRUE_BIOLOGICAL	140052	1	Solanum lycopersicum cultivar I-3 chromosome 4	7.425742574
VdnRY4_11901	1	1	174	189	uv|NGB00055.1:1-1950	677	692	Weak	Weak	Suspect[190,202];	TRUE_BIOLOGICAL	558016	1		7.425742574
CLCdnRY4_18802	1	1	169	187	uv|U13189.1:9688-10585	717	699	Moderate	Moderate	Suspect[188,201];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578315 (LOC102578315), mRNA	8.955223881
SdnRY1_102061	1	1	9	26	uv|KF718979.1:2206-6730	3346	3329	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 8	8.457711443
CLCdnRY5_86271	1	1	166	183	uv|KC702231.1:1-1021	450	433	Weak	Weak	Suspect[184,201];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum F-box/kelch-repeat protein SKIP30-like (LOC102590758), mRNA	8.457711443
SdnRY1_101158	1	1	167	183	uv|U09128.1:3334-10218	3865	3849	Weak	Weak	Suspect[184,201];	TRUE_BIOLOGICAL	91347	1		7.960199005
SdnRY1_101346	1	1	161	177	uv|J02459.1:1-48502-49	13549	13533	Weak	Weak	Suspect[178,201];	TRUE_BIOLOGICAL	10699	1	Homo sapiens ATP/GTP binding protein like 1 (AGBL1), RefSeqGene on chromosome 15	7.960199005
SdnRY1_101700	1	1	171	187	uv|KF719005.1:2205-5132	1946	1930	Weak	Weak	Suspect[188,201];	TRUE_BIOLOGICAL	3701	1		7.960199005
SdnRY1_101966	1	1	164	180	uv|NGB00055.1:1-1950	1493	1477	Weak	Weak	Suspect[181,201];	TRUE_BIOLOGICAL	558016	1	Human DNA sequence from clone RP1-107N3 on chromosome X, complete sequence	7.960199005
CLCdnRY1_57786	1	1	9	24	uv|M16192.1:1-2517-49	2450	2435	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102605885 (LOC102605885), transcript variant X1, ncRNA	7.462686567
CLCdnRY8_36701	1	1	5	20	uv|U47294.2:1-1774	127	142	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	10508	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At1g74850, chloroplastic (LOC102602805), mRNA	7.462686567
SdnRY1_100820	1	1	14	29	uv|L08862.1:1-2039	1171	1186	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch12, complete genome	7.462686567
SdnRY1_100862	1	1	171	186	uv|U89937.1:10-1647	410	395	Weak	Weak	Suspect[187,201];	TRUE_BIOLOGICAL	40674	1	Homo sapiens chromosome 5 clone RP11-158J3, complete sequence	7.462686567
SdnRY1_100974	1	1	14	29	uv|FJ931533.1:7978-12753-49	2646	2661	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Morus notabilis uncharacterized LOC21411199 (LOC21411199), transcript variant X2, mRNA	7.462686567
SdnRY1_101482	1	1	183	198	uv|U89961.1:1-4240	426	441	Weak	Weak	Suspect[199,201];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch07, complete genome	7.462686567
SdnRY1_101726	1	1	176	191	uv|AF237704.1:5192-5677	365	350	Weak	Weak	Suspect[192,201];	NO_DATA	1	1	Staphylococcus epidermidis strain NCTC13924 genome assembly, chromosome: 1	7.462686567
SdnRY1_101858	1	1	168	183	uv|NGB00051.1:1428-2848	1292	1307	Weak	Weak	Suspect[184,201];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107060824 (LOC107060824), ncRNA	7.462686567
SdnRY1_102280	1	1	1	16	uv|M29363.1:3595-3692	28	43	Weak	Weak	None	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 6	7.462686567
CLCdnRY12_32018	1	1	178	193	uv|DQ317695.1:1340-3572	1808	1793	Weak	Weak	Suspect[194,201];	TRUE_BIOLOGICAL	590	1	PREDICTED: Solanum pennellii xyloglucan galactosyltransferase KATAMARI1-like (LOC107026583), mRNA	7.462686567
VdnRY1_103906	1	1	22	37	uv|KM062047.1:4179-4302	72	57	Weak	Weak	Suspect[1,21];	NO_DATA	1	1		7.462686567
VdnRY2_65707	1	1	185	200	uv|AF379854.1:3-2710	1905	1890	Weak	Weak	Suspect[201,201];	NO_DATA	1	1	PREDICTED: Solanum pennellii probable sodium-coupled neutral amino acid transporter 6 (LOC107018489), mRNA	7.462686567
VdnRY2_114742	1	1	16	31	uv|J02400.1:1-5243-49	4779	4794	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic (LOC102602761), transcript variant X2, mRNA	7.462686567
CLCdnRY5_49018	1	1	167	186	uv|NGB00080.1:1495-1654-49	115	96	Moderate	Moderate	Suspect[187,200];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum uncharacterized LOC102594087 (LOC102594087), mRNA	9.5
CLCdnRY11_26846	1	1	176	193	uv|KF718979.1:2206-6730	2108	2125	Weak	Weak	Suspect[194,200];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum eukaryotic initiation factor 4A-2-like (LOC102594403), transcript variant X2, mRNA	8.5
CLCdnRY7_34847	1	1	173	190	uv|U67875.1:6541-6683	18	35	Weak	Weak	Suspect[191,200];	NO_DATA	1	1	Solanum tuberosum homeobox protein HD1 (LOC102600529), mRNA<>Solanum tuberosum class II knox protein (HOX2) mRNA, complete cds	8.5
CLCdnRY1_26409	1	1	173	189	uv|L11060.1:23-714	281	265	Weak	Weak	Suspect[190,200];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum protein fluG-like (LOC102585591), mRNA	8
CLCdnRY8_48641	1	1	13	29	uv|FJ931533.1:7978-12753-49	913	929	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	7215	1	Solanum pennellii chromosome ch02, complete genome	8
CLCdnRY3_21271	1	1	11	26	uv|NGB00402.1:644-1577	70	55	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	620	1	Solanum lycopersicum cultivar I-3 chromosome 5	7.5
SdnRY1_102486	1	1	179	194	uv|Z32692.1:2323-5137	810	795	Weak	Weak	Suspect[195,200];	TRUE_BIOLOGICAL	620	1	Triticum turgidum subsp. durum clone BAC 1836I21 hypothetical protein and plastid acetyl-CoA carboxylase (Acc-1) genes, complete cds	7.5
SdnRY1_102648	1	1	5	20	uv|KM407512.1:886-4985	1397	1382	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	4930	1	Solanum tuberosum clone BAC BC58I22 sequence	7.5
VdnRY1_121142	1	1	8	23	uv|JX560326.2:346-1260	660	645	Weak	Weak	Suspect[1,7];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein MID1-COMPLEMENTING ACTIVITY 1 (LOC102582034), transcript variant X5, mRNA	7.5
VdnRY3_102348	1	1	16	31	uv|DQ391279.1:1-10285	4513	4528	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579218 (LOC102579218), mRNA	7.5
CLCdnRY10_83875	1	1	17	32	uv|JF909481.1:3855-5640	268	253	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	7.5
CLCdnRY11_76010	1	1	24	39	uv|M17346.1:1-352	268	283	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum probable E3 ubiquitin-protein ligase XERICO (LOC102603743), mRNA	7.5
CLCdnRY1_30222	1	1	166	181	uv|GU339046.1:5854-6432-49	411	396	Weak	Weak	Suspect[182,200];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum protein SULFUR DEFICIENCY-INDUCED 2 (LOC102582804), mRNA	7.5
CLCdnRY1_37522	1	1	178	199	uv|AF379854.1:3-2710	691	712	Weak	Weak	None	TRUE_BIOLOGICAL	5820	1	PREDICTED: Solanum tuberosum photosystem I reaction center subunit III, chloroplastic-like (LOC102585620), mRNA	10.55276382
CLCdnRY4_56494	1	1	25	40	uv|M16217.1:1-2529	1959	1944	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch04, complete genome	7.537688442
SdnRY1_103349	1	1	16	31	uv|AF379854.1:4263-5841	999	1014	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	5820	1	PREDICTED: Pan troglodytes 60S ribosomal protein L13a pseudogene (LOC107967547), misc_RNA	7.537688442
SdnRY1_103278	1	1	169	184	uv|JF909481.1:3855-5640	253	268	Weak	Weak	Suspect[185,199];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	7.537688442
VdnRY2_17587	1	1	161	176	uv|L08860.1:1-1129	642	657	Weak	Weak	Suspect[177,199];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch06, complete genome	7.537688442
CLCdnRY1_33861	1	1	172	188	uv|U13843.1:1887-9923	4609	4593	Weak	Weak	Suspect[189,198];	TRUE_BIOLOGICAL	325454	1	Solanum lycopersicum cultivar I-3 chromosome 1	8.080808081
SdnRY1_103717	1	1	16	31	uv|EU496100.1:270-2269	1166	1151	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	7.575757576
SdnRY1_103727	1	1	15	30	uv|U67875.1:6835-8216	371	356	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	4895	1	Solanum pennellii chromosome ch05, complete genome	7.575757576
SdnRY1_103841	1	1	162	177	uv|U89928.1:964-1057	17	2	Weak	Weak	Suspect[178,198];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch03, complete genome	7.575757576
SdnRY1_103749	1	1	165	180	uv|JQ927446.1:4885-6835-49	971	956	Weak	Weak	Suspect[181,198];	NO_DATA	1	1		7.575757576
SdnRY1_104328	1	1	165	181	uv|J02459.1:1-48502-49	33901	33885	Weak	Weak	Suspect[182,197];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Nicotiana tabacum uncharacterized LOC107796009 (LOC107796009), transcript variant X1, mRNA	8.121827411
CLCdnRY2_48442	1	1	18	33	uv|M77169.1:820-5161	2452	2437	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	1485	1	Solanum lycopersicum chromosome ch05, complete genome	7.614213198
VdnRY1_97963	1	1	166	181	uv|Z50143.1:1384-1504	9	24	Weak	Weak	Suspect[182,197];	TRUE_BIOLOGICAL	91347	1	Solanum pennellii chromosome ch08, complete genome	7.614213198
VdnRY1_119279	1	1	2	17	uv|NGB00413.1:4732-7508	2006	1991	Weak	Weak	Suspect[1,1];Suspect[190,197];	TRUE_BIOLOGICAL	12103	1	Solanum pennellii chromosome ch05, complete genome	7.614213198
VdnRY1_119279	1	1	174	189	uv|D10357.1:253-396	82	97	Weak	Weak	Suspect[1,1];Suspect[190,197];	NO_DATA	1	1	Solanum pennellii chromosome ch05, complete genome	7.614213198
SdnRY1_104659	1	1	175	196	uv|GQ160907.1:3415-3540	49	70	Moderate	Moderate	None	TRUE_BIOLOGICAL	4930	1	Hannaella oryzae mitochondrion, complete genome	10.71428571
CLCdnRY2_41528	1	1	172	189	uv|U67875.1:6541-6683	18	35	Weak	Weak	Suspect[190,196];	NO_DATA	1	1	Solanum tuberosum homeobox protein HD1 (LOC102600529), mRNA<>Solanum tuberosum class II knox protein (HOX2) mRNA, complete cds	8.673469388
VdnRY1_153634	1	1	179	195	uv|DQ493886.2:2728-2826	59	75	Weak	Weak	Suspect[196,196];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102605573 (LOC102605573), ncRNA	8.163265306
SdnRY1_104645	1	1	8	23	uv|L08862.1:1-2039	519	504	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	1279	1	Homo sapiens FA complementation group I (FANCI), RefSeqGene (LRG_500) on chromosome 15	7.653061224
VdnRY1_25840	1	1	9	24	uv|KC702231.1:1-1021	93	78	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum alpha-amylase-like (LOC102582328), transcript variant X2, mRNA	7.653061224
VdnRY2_74067	1	1	161	176	uv|M77169.1:820-5161	4072	4057	Weak	Weak	Suspect[177,196];	TRUE_BIOLOGICAL	1485	1	Solanum lycopersicum cultivar I-3 chromosome 7	7.653061224
SdnRY1_105028	1	1	175	192	uv|Z22671.1:1221-1388	32	15	Weak	Weak	Suspect[1,13];Suspect[193,195];	NO_DATA	1	1	Solanum tuberosum clone RHPOTKEY152M21, complete sequence	8.717948718
VdnRY5_18663	1	1	3	19	uv|M77169.1:820-5161	2035	2019	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	1485	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604525 (LOC102604525), mRNA	8.205128205
CLCdnRY1_47417	1	1	179	194	uv|JX025642.1:7290-7461	87	102	Weak	Weak	Suspect[195,195];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 8	7.692307692
SdnRY1_104991	1	1	160	175	uv|J02459.1:1-48502-49	43613	43628	Weak	Weak	Suspect[176,195];	TRUE_BIOLOGICAL	10699	1	Solanum lycopersicum cultivar I-3 chromosome 3	7.692307692
SdnRY1_105028	1	1	14	29	uv|M16217.1:3121-3879-49	706	721	Weak	Weak	Suspect[1,13];Suspect[193,195];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum clone RHPOTKEY152M21, complete sequence	7.692307692
VdnRY3_71204	1	1	175	190	uv|JF909482.1:3850-8059	425	410	Weak	Weak	Suspect[191,195];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum pennellii uncharacterized LOC107018198 (LOC107018198), mRNA	7.692307692
SdnRY1_105059	1	1	175	190	uv|U89936.1:1117-1464	132	147	Weak	Weak	Suspect[191,195];	NO_DATA	1	1	Human DNA sequence from clone RP3-436N22 on chromosome 1q24.1-25.3, complete sequence	7.692307692
CLCdnRY4_54651	1	1	7	23	uv|X13003.1:2753-4028	617	633	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	561	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g65560-like (LOC102592649), transcript variant X3, mRNA	8.24742268
SdnRY1_105336	1	1	163	178	uv|KC702165.1:1-1023	743	728	Weak	Weak	Suspect[179,194];	TRUE_BIOLOGICAL	196118	1	Homo sapiens kinesin family member 21A (KIF21A), RefSeqGene on chromosome 12	7.731958763
SdnRY1_105523	1	1	12	27	uv|KF719005.1:2205-5132	1454	1469	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	3701	1	Solanum tuberosum clone RH090J20, complete sequence	7.731958763
VdnRY3_35292	1	1	12	27	uv|KC702237.1:1-1024	365	380	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	196118	1		7.731958763
SdnRY1_105285	1	1	177	192	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[193,194];	TRUE_BIOLOGICAL	10699	1	Solanum lycopersicum cultivar I-3 chromosome 2	7.731958763
VdnRY4_16029	1	1	23	38	uv|JF909482.1:3850-8059	1750	1765	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum AAA-ATPase ASD, mitochondrial-like (LOC102605239), mRNA	7.731958763
SdnRY1_105799	1	1	161	176	uv|LC121520.1:4008-4664	439	424	Weak	Weak	Suspect[179,193];	TRUE_BIOLOGICAL	1279	1		7.772020725
SdnRY1_105799	1	1	163	178	uv|AY390769.1:1-1000	67	52	Weak	Weak	Suspect[179,193];	NO_DATA	1	1		7.772020725
VdnRY3_58919	1	1	177	192	uv|U13860.1:6124-7626-49	1161	1146	Weak	Weak	Suspect[193,193];	TRUE_BIOLOGICAL	140052	1	Solanum lycopersicum cultivar I-3 chromosome 2	7.772020725
CLCdnRY2_48081	1	1	15	30	uv|NGB00051.1:1428-2848	1289	1304	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	Solanum melongena genes for DNA polymerase theta-like protein, hypothetical proteins, BURP domain-containing protein 17-like, complete cds, cultivar: AE-P03, clone: SmBAC0047b	7.772020725
VdnRY5_35246	1	1	160	175	uv|Z29589.1:3211-4486	455	440	Weak	Weak	Suspect[176,193];	TRUE_BIOLOGICAL	4527	1	PREDICTED: Solanum tuberosum 3-ketoacyl-CoA synthase 5-like (LOC102606072), mRNA	7.772020725
CLCdnRY1_13691	1	1	4	19	uv|U67875.1:18-1316	1046	1031	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	4895	1	Solanum pennellii chromosome ch12, complete genome	7.8125
SdnRY1_106472	1	1	157	172	uv|U02436.1:3152-4436	611	626	Weak	Weak	Suspect[173,192];	TRUE_BIOLOGICAL	4930	1		7.8125
VdnRY3_1216	1	1	174	189	uv|JF909482.1:3850-8059	2152	2167	Weak	Weak	Suspect[190,192];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch04, complete genome	7.8125
VdnRY3_67462	1	1	170	185	uv|NGB00587.1:1-3232	2155	2170	Weak	Weak	Suspect[186,192];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 1	7.8125
VdnRY2_5842	1	1	10	28	uv|EU546823.1:7514-7611	79	97	Moderate	Moderate	Suspect[1,9];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum phosphomethylethanolamine N-methyltransferase-like (LOC102596533), mRNA	9.42408377
CLCdnRY4_67907	1	1	4	20	uv|X13003.1:2753-4028	617	633	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	561	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g65560-like (LOC102592649), transcript variant X3, mRNA	8.376963351
SdnRY1_107099	1	1	161	176	uv|KF719004.1:2204-2946	656	641	Weak	Weak	Suspect[177,191];	TRUE_BIOLOGICAL	3803	1	Homo sapiens BAC clone RP11-563B23 from 2, complete sequence	7.853403141
VdnRY5_44508	1	1	12	27	uv|KM407512.1:886-4985	583	568	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (LOC102593198), transcript variant X2, mRNA	7.853403141
VdnRY1_53583	1	1	172	189	uv|Z22761.1:1-5585	3611	3628	Weak	Weak	Suspect[190,190];	TRUE_BIOLOGICAL	10088	1	Solanum lycopersicum cultivar I-3 chromosome 5	8.947368421
CLCdnRY3_57875	1	1	169	186	uv|KC702208.1:1-1350	9	26	Weak	Weak	Suspect[187,190];	TRUE_BIOLOGICAL	1386	1		8.947368421
VdnRY1_54834	1	1	24	40	uv|KC702187.1:1-1023	707	723	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 12	8.421052632
VdnRY5_32146	1	1	165	180	uv|LC121520.1:2705-3093	182	167	Weak	Weak	Suspect[181,190];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum metalloendoproteinase 3-MMP-like (LOC102592086), mRNA	7.894736842
VdnRY5_60233	1	1	14	29	uv|AY568055.1:6692-7837	430	415	Weak	Weak	Suspect[1,13];	NO_DATA	1	1	Solanum tuberosum chromosome 7 clone RHPOTKEY101K20, complete sequence	7.894736842
VdnRY2_7911	1	1	174	189	uv|KF718979.1:2206-6730	1673	1658	Weak	Weak	Suspect[190,190];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum lycopersicum heme-binding-like protein At3g10130, chloroplastic (LOC101258421), mRNA	7.894736842
VdnRY2_31667	1	1	8	23	uv|U13864.1:2748-4229-44	1370	1355	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum secoisolariciresinol dehydrogenase-like (LOC102580004), transcript variant X9, mRNA	7.894736842
VdnRY2_69445	1	1	158	173	uv|GQ489187.1:1-238	76	91	Weak	Weak	Suspect[174,190];	NO_DATA	1	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At3g22150, chloroplastic-like (LOC102578445), transcript variant X1, mRNA	7.894736842
SdnRY1_108439	1	1	20	36	uv|J02459.1:1-48502-49	45956	45972	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	10699	1	Solanum lycopersicum chromosome ch03, complete genome	8.465608466
VdnRY2_108602	1	1	158	174	uv|KC702170.1:1-1957	888	872	Weak	Weak	Suspect[175,189];	TRUE_BIOLOGICAL	1386	1	Solanum pennellii chromosome ch05, complete genome	8.465608466
CLCdnRY5_89193	1	1	157	172	uv|KC702187.1:1-1023	217	202	Weak	Weak	Suspect[173,189];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum dof zinc finger protein DOF5.6-like (LOC102593793), mRNA	7.936507937
VdnRY4_47713	1	1	171	186	uv|U89960.1:3-1162	173	158	Weak	Weak	Suspect[187,189];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum phospholipid-transporting ATPase 6 (LOC102589917), mRNA	7.936507937
CLCdnRY3_36179	1	1	165	180	uv|L08862.1:2848-3728-49	421	436	Weak	Weak	Suspect[181,189];	NO_DATA	1	1		7.936507937
SdnRY1_108825	1	1	98	138	uv|KF719004.1:2204-2946	73	113	Weak	Weak	None	TRUE_BIOLOGICAL	3803	1	PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA	21.27659574
SdnRY1_108953	1	1	21	37	uv|KC702198.1:1-1023	603	587	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch02, complete genome	8.510638298
VdnRY2_16049	1	1	161	177	uv|JX069764.1:3841-4011	143	127	Weak	Weak	Suspect[178,188];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102578172 (LOC102578172), mRNA	8.510638298
SdnRY1_108999	1	1	25	40	uv|K03114.1:3449-3847-44	403	418	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	561	1	Solanum pennellii chromosome ch07, complete genome	7.978723404
VdnRY4_6994	1	1	164	179	uv|Z32692.1:5183-6220	959	974	Weak	Weak	Suspect[180,188];	TRUE_BIOLOGICAL	10242	1	PREDICTED: Solanum tuberosum aminoacyl tRNA synthase complex-interacting multifunctional protein 1 (LOC102589855), mRNA	7.978723404
VdnRY5_2001	1	1	173	188	uv|KC702236.1:1-1024	974	959	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	Solanum demissum chromosome 11 clone PGEC400L14, complete sequence	7.978723404
SdnRY1_108824	1	1	171	186	uv|J02459.1:1-48502-49	31196	31181	Weak	Weak	Suspect[187,188];	TRUE_BIOLOGICAL	10699	1	Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-2) gene, nuclear gene encoding chloroplast protein, complete cds	7.978723404
SdnRY1_109174	1	1	157	172	uv|JF909482.1:3850-8059	2732	2747	Weak	Weak	Suspect[184,188];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061716 (LOC107061716), transcript variant X7, ncRNA	7.978723404
SdnRY1_109174	1	1	168	183	uv|EU546816.1:3419-3615	55	40	Weak	Weak	Suspect[184,188];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061716 (LOC107061716), transcript variant X7, ncRNA	7.978723404
SdnRY1_110085	1	1	171	186	uv|JN874480.1:11708-20103	3769	3784	Weak	Weak	Suspect[187,187];	TRUE_BIOLOGICAL	357	1	PREDICTED: Homo sapiens uncharacterized LOC105377862 (LOC105377862), transcript variant X4, ncRNA	8.021390374
SdnRY1_110175	1	1	148	163	uv|KC702209.1:1-2022	497	512	Weak	Weak	Suspect[164,187];	TRUE_BIOLOGICAL	196118	1	Human DNA sequence from clone RP11-248C1 on chromosome 10, complete sequence	8.021390374
SdnRY1_110318	1	1	21	36	uv|KM407506.1:2354-4632	759	744	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	4930	1	Homo sapiens BAC clone CH17-8H4 from chromosome 9, complete sequence	8.021390374
SdnRY1_110323	1	1	165	180	uv|U29899.1:1847-4463	2224	2209	Weak	Weak	Suspect[181,187];	NO_DATA	1	1	Homo sapiens BAC clone RP11-579C11 from 12, complete sequence	8.021390374
VdnRY4_71687	1	1	15	30	uv|U13860.1:6124-7626-49	1161	1146	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	140052	1	Solanum pennellii chromosome ch02, complete genome	8.021390374
SdnRY1_110680	1	1	9	24	uv|KF719005.1:2205-5132	1193	1208	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	3701	1		8.064516129
SdnRY1_110798	1	1	17	32	uv|KC702206.1:1-523	454	469	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	196118	1	Human DNA sequence from clone RP11-31A20 on chromosome 10, complete sequence	8.064516129
SdnRY1_110900	1	1	150	165	uv|NGB00412.1:1-1359	834	819	Weak	Weak	Suspect[166,186];	NO_DATA	1	1	Cutibacterium acnes strain FDAARGOS_503 chromosome, complete genome	8.064516129
VdnRY2_25552	1	1	170	185	uv|JX560397.1:83-5970	128	113	Weak	Weak	Suspect[186,186];	TRUE_BIOLOGICAL	1236	1	Solanum lycopersicum cultivar I-3 chromosome 11	8.064516129
VdnRY3_13710	1	1	23	38	uv|KY031725.1:1-5101	1318	1303	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum uncharacterized LOC102600075 (LOC102600075), transcript variant X2, mRNA	8.064516129
VdnRY4_53108	1	1	10	25	uv|KC702237.1:1-1024	852	867	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum protein FLOWERING LOCUS T-like (LOC102606326), mRNA	8.064516129
VdnRY4_26210	1	1	22	44	uv|JF909482.1:3850-8059	2868	2890	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	3701	1	Solanum lycopersicum cultivar I-3 chromosome 6	11.89189189
SdnRY1_111242	1	1	7	25	uv|M34298.1:3143-4604	903	885	Moderate	Moderate	Suspect[1,6];	TRUE_BIOLOGICAL	6237	1	Solanum pennellii chromosome ch04, complete genome	9.72972973
CLCdnRY3_15793	1	1	3	18	uv|U09128.1:3334-10218	5312	5297	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	91347	1	PREDICTED: Solanum tuberosum cytochrome P450 83B1-like (LOC102587099), mRNA	8.108108108
VdnRY2_138453	1	1	163	178	uv|KC702192.1:1-523	183	198	Weak	Weak	Suspect[179,185];	TRUE_BIOLOGICAL	196118	1		8.108108108
SdnRY1_112049	1	1	167	183	uv|U64448.1:1727-2734	246	262	Weak	Weak	Suspect[184,184];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 3	8.695652174
VdnRY2_88899	1	1	163	178	uv|KC702194.1:1-1023	740	755	Weak	Weak	Suspect[179,184];	TRUE_BIOLOGICAL	196118	1	Nicotiana tabacum microsatellite A5 sequence	8.152173913
VdnRY3_104157	1	1	146	161	uv|U67875.1:8796-9922	516	501	Weak	Weak	Suspect[162,184];	TRUE_BIOLOGICAL	4895	1	Solanum lycopersicum cultivar I-3 chromosome 11	8.152173913
VdnRY1_182211	1	1	147	162	uv|AF072538.1:626-822	171	156	Weak	Weak	Suspect[163,184];	NO_DATA	1	1	PREDICTED: Solanum tuberosum heavy metal-associated isoprenylated plant protein 26 (LOC102583503), mRNA	8.152173913
VdnRY4_43556	1	1	153	168	uv|X70481.1:3564-4492	285	300	Weak	Weak	Suspect[184,184];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum ABC transporter B family member 26, chloroplastic (LOC102596393), mRNA	8.152173913
VdnRY4_43556	1	1	168	183	uv|U14124.1:1-466	217	202	Weak	Weak	Suspect[184,184];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum tuberosum ABC transporter B family member 26, chloroplastic (LOC102596393), mRNA	8.152173913
SdnRY1_113017	1	1	150	167	uv|KC702217.1:1-1119	79	62	Weak	Weak	Suspect[168,183];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 12	9.289617486
VdnRY4_35391	1	1	21	37	uv|V00604.2:1-6407-49	5022	5006	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	10861	1	PREDICTED: Solanum tuberosum polygalacturonase non-catalytic subunit AroGP3-like (LOC102603032), mRNA	8.743169399
SdnRY1_112818	1	1	15	30	uv|Z46234.1:664-3443	1313	1328	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	4892	1	PREDICTED: Solanum pennellii SURP and G-patch domain-containing protein 1-like protein (LOC107002722), transcript variant X1, mRNA	8.196721311
SdnRY1_112972	1	1	151	166	uv|HM640258.1:317-2913	1207	1192	Weak	Weak	Suspect[167,183];	TRUE_BIOLOGICAL	5073	1	Human DNA sequence from clone RP4-581F7 on chromosome Xq26.1-27.3, complete sequence	8.196721311
SdnRY1_113062	1	1	152	167	uv|JQ927446.1:4885-6835-49	271	256	Weak	Weak	Suspect[168,183];	NO_DATA	1	1	Human Chromosome X, complete sequence	8.196721311
VdnRY2_200202	1	1	9	24	uv|DQ391279.1:1-10285	6762	6747	Weak	Weak	Suspect[1,8];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 7	8.196721311
VdnRY4_52483	1	1	162	177	uv|X53122.1:2456-2549	55	40	Weak	Weak	Suspect[178,183];	NO_DATA	1	1		8.196721311
SdnRY1_113938	1	1	15	31	uv|DQ883658.3:1-743	514	498	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	Homo sapiens armadillo repeat containing X-linked 4 (ARMCX4), RefSeqGene on chromosome X	8.791208791
SdnRY1_114022	1	1	25	41	uv|J02459.1:1-48502-49	31176	31192	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	10699	1	Solanum lycopersicum cultivar I-3 chromosome 4	8.791208791
SdnRY1_113734	1	1	19	34	uv|JN874481.1:57-2095	1054	1039	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	3705	1	Homo sapiens chromosome 18, clone CTD-2354A18, complete sequence	8.241758242
SdnRY1_113822	1	1	18	33	uv|JN874480.1:11708-20103	2710	2695	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	357	1	Cutibacterium acnes strain KCOM 1315 chromosome, complete genome	8.241758242
SdnRY1_114173	1	1	155	170	uv|GU593055.1:13024-13902-49	752	767	Weak	Weak	Suspect[171,182];	NO_DATA	1	1	PREDICTED: Capsicum annuum prolyl 3-hydroxylase 1 (LOC107838780), transcript variant X3, mRNA	8.241758242
VdnRY1_139901	1	1	1	16	uv|KC702179.1:1-1019	723	708	Weak	Weak	None	TRUE_ARTIFICIAL	81077	81077	Solanum pennellii chromosome ch04, complete genome	8.241758242
VdnRY4_56196	1	1	108	133	uv|U14124.1:1-466	325	300	Moderate	Moderate	Suspect[134,181];	TRUE_BIOLOGICAL	4892	1	Pithomyces chartarum mitochondrion, complete genome	13.8121547
VdnRY4_19397	1	1	13	29	uv|U13864.1:2748-4229-44	1051	1035	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	1279	1		8.839779006
SdnRY1_114688	1	1	165	180	uv|AY390769.1:1-1000	856	841	Weak	Weak	Suspect[181,181];	NO_DATA	1	1	Homo sapiens glutamate receptor interacting protein 1 (GRIP1), RefSeqGene on chromosome 12	8.287292818
SdnRY1_114737	1	1	4	19	uv|KC702181.1:1-1123	204	219	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	1386	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061231 (LOC107061231), mRNA	8.287292818
SdnRY1_114852	1	1	8	23	uv|KC702204.1:1-521	223	238	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	196118	1	Protaspis grandis large subunit ribosomal RNA gene, partial sequence	8.287292818
SdnRY1_114878	1	1	8	23	uv|M16217.1:1-2529	210	225	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum chromosome 11 clone RH193D01, complete sequence	8.287292818
SdnRY1_115047	1	1	5	20	uv|FJ931533.1:7978-12753-49	936	951	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	7215	1	Homo sapiens BAC clone CTB-162B4 from 4, complete sequence	8.287292818
SdnRY1_115340	1	1	161	176	uv|EF216317.1:3626-3724	27	12	Weak	Weak	Suspect[177,180];	NO_DATA	1	1	Homo sapiens genomic DNA, chromosome 21q, section 30/105	8.333333333
VdnRY1_162097	1	1	5	20	uv|KC702213.1:1-1991	1536	1521	Weak	Weak	Suspect[1,4];	TRUE_ARTIFICIAL	81077	81077	Solanum tuberosum chromosome 5 clone RH167J23, complete sequence	8.333333333
VdnRY4_67127	1	1	16	31	uv|M16217.1:1-2529	878	863	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 2	8.333333333
CLCdnRY1_60927	1	1	15	32	uv|U13843.1:1887-9923	4734	4751	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	325454	1	Solanum tuberosum clone PI4038 metallocarboxypeptidase inhibitor mRNA, complete cds	9.497206704
VdnRY1_110776	1	1	158	174	uv|KC702170.1:1-1957	888	872	Weak	Weak	Suspect[175,179];	TRUE_BIOLOGICAL	1386	1	Solanum lycopersicum cultivar I-3 chromosome 5	8.938547486
SdnRY1_116446	1	1	21	36	uv|U89961.1:1-4240	2419	2434	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum pennellii BTB/POZ domain-containing protein POB1-like (LOC107028980), misc_RNA	8.379888268
VdnRY2_112915	1	1	151	166	uv|J02400.1:1-5243-49	3232	3247	Weak	Weak	Suspect[167,179];	TRUE_BIOLOGICAL	151341	1	Solanum pennellii chromosome ch03, complete genome	8.379888268
VdnRY4_56453	1	1	25	40	uv|NGB00051.1:1428-2848	1292	1307	Weak	Weak	Suspect[1,24];	NO_DATA	1	1	Solanum tuberosum hemoglobin (LOC102577514), mRNA<>Solanum tuberosum cultivar 68-DTU-28 hemoglobin mRNA, complete cds	8.379888268
VdnRY1_167445	1	1	148	164	uv|M77169.1:820-5161	2009	2025	Weak	Weak	Suspect[165,178];	TRUE_BIOLOGICAL	1485	1		8.988764045
VdnRY4_65482	1	1	148	164	uv|KM407512.1:886-4985	2656	2640	Weak	Weak	Suspect[165,178];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 2	8.988764045
CLCdnRY4_73254	1	1	22	37	uv|JF909481.1:3855-5640	1104	1089	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	Solanum pennellii chromosome ch04, complete genome	8.426966292
SdnRY1_117665	1	1	154	169	uv|KC702212.1:1-1136	1061	1046	Weak	Weak	Suspect[170,177];	TRUE_ARTIFICIAL	81077	81077	Homo sapiens 3 BAC RP11-172I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence	8.474576271
VdnRY1_209325	1	1	17	32	uv|AF310136.1:497-2034	979	994	Weak	Weak	Suspect[1,16];	TRUE_BIOLOGICAL	2	1	Solanum pennellii chromosome ch11, complete genome	8.474576271
VdnRY2_50487	1	1	144	159	uv|KF853602.1:1019-2932	308	293	Weak	Weak	Suspect[160,177];	TRUE_BIOLOGICAL	7711	1	PREDICTED: Solanum tuberosum replication protein A 70 kDa DNA-binding subunit B-like (LOC102584093), mRNA	8.474576271
VdnRY2_132863	1	1	148	163	uv|V00604.2:1-6407-49	4717	4702	Weak	Weak	Suspect[164,177];	TRUE_BIOLOGICAL	10861	1	Hyoscyamus niger chloroplast, complete genome	8.474576271
VdnRY2_157419	1	1	16	31	uv|AF013258.1:557-763	22	7	Weak	Weak	Suspect[1,15];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative disease resistance RPP13-like protein 1 (LOC107057659), transcript variant X2, mRNA	8.474576271
SdnRY1_118950	1	1	6	22	uv|KC702228.1:1-1023	791	775	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	196118	1	Human DNA sequence from clone SC22CB-33F2 on chromosome 22, complete sequence	9.090909091
VdnRY3_104250	1	1	13	29	uv|NGB00413.1:1-3960	622	606	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	12103	1	Solanum lycopersicum cultivar I-3 chromosome 12	9.090909091
SdnRY1_118862	1	1	12	27	uv|U67875.1:18-1316	1195	1210	Weak	Weak	Suspect[1,11];Suspect[166,176];	TRUE_BIOLOGICAL	4895	1		8.522727273
SdnRY1_118862	1	1	150	165	uv|U67875.1:18-1316	1210	1195	Weak	Weak	Suspect[1,11];Suspect[166,176];	TRUE_BIOLOGICAL	4895	1		8.522727273
VdnRY2_122411	1	1	137	152	uv|KC702178.1:1-2022	879	894	Weak	Weak	Suspect[153,176];	TRUE_BIOLOGICAL	196118	1		8.522727273
SdnRY1_119737	1	1	137	153	uv|JQ927446.1:4885-6835-49	272	256	Weak	Weak	Suspect[154,175];	NO_DATA	1	1	Homo sapiens chromosome 8, clone RP11-24L2, complete sequence	9.142857143
SdnRY1_119789	1	1	138	154	uv|AF025844.2:1-1301	1077	1061	Weak	Weak	Suspect[155,175];	TRUE_BIOLOGICAL	6134	1	Homo sapiens chromosome 1 clone CH17-39E12, complete sequence	9.142857143
SdnRY1_119622	1	1	18	33	uv|AF327712.1:1582-7289	1097	1082	Weak	Weak	Suspect[1,17];	TRUE_BIOLOGICAL	286	1	Homo sapiens BAC clone RP11-163G21 from 2, complete sequence	8.571428571
VdnRY1_187314	1	1	151	166	uv|DQ091275.1:1587-3699	707	722	Weak	Weak	Suspect[167,175];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein indeterminate-domain 2-like (LOC102594833), mRNA	8.571428571
VdnRY4_51357	1	1	20	36	uv|U02436.1:1330-2607	447	463	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	4930	1	Brachybacterium ginsengisoli strain DCY80 chromosome, complete genome	9.195402299
VdnRY1_98128	1	1	94	119	uv|U14124.1:1-466	325	300	Moderate	Moderate	None	TRUE_BIOLOGICAL	4892	1	Didymella pinodes strain 165/T mitochondrion, complete genome	14.45086705
SdnRY1_120965	1	1	10	26	uv|DQ493886.2:2728-2826	75	59	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	Homo sapiens chromosome 18, clone RP11-752P2, complete sequence	9.248554913
VdnRY1_115399	1	1	144	159	uv|Z50122.1:2317-2422	45	30	Weak	Weak	Suspect[160,173];	TRUE_BIOLOGICAL	286	1	PREDICTED: Solanum tuberosum putative F-box protein At3g10430 (LOC102596499), transcript variant X2, mRNA	8.670520231
VdnRY3_111728	1	1	144	159	uv|L05669.1:1-1770	252	237	Weak	Weak	Suspect[160,173];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum protein FATTY ACID EXPORT 5 (LOC102584920), mRNA	8.670520231
VdnRY2_113215	1	1	137	152	uv|M16217.1:1-2529	1691	1676	Weak	Weak	Suspect[153,173];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum clone RH066A20, complete sequence	8.670520231
CLCdnRY3_75386	1	1	22	39	uv|KC702236.1:1-1024	702	719	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 8	9.88372093
SdnRY1_122105	1	1	19	34	uv|NGB00413.1:4732-7508	143	128	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	12103	1	Cucumis melo genomic chromosome, chr_1	8.720930233
VdnRY1_99359	1	1	145	160	uv|FJ160466.1:1899-7260-49	1997	1982	Weak	Weak	Suspect[161,172];	TRUE_BIOLOGICAL	620	1	Solanum pennellii chromosome ch06, complete genome	8.720930233
VdnRY2_157924	1	1	19	34	uv|KC702202.1:1-1020	823	808	Weak	Weak	Suspect[1,18];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable DNA-directed RNA polymerase subunit delta (LOC102580506), transcript variant X2, mRNA	8.720930233
SdnRY1_122233	1	1	20	35	uv|JN874480.1:6795-9434	2523	2508	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	40674	1		8.771929825
VdnRY1_156426	1	1	3	18	uv|AY597273.1:8351-8448	29	44	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum protein DETOXIFICATION 29-like (LOC102592464), transcript variant X2, mRNA	8.771929825
VdnRY1_98127	1	1	94	119	uv|U14124.1:1-466	325	300	Moderate	Moderate	None	TRUE_BIOLOGICAL	4892	1	Didymella pinodes strain 165/T mitochondrion, complete genome	14.70588235
SdnRY1_123446	1	1	1	16	uv|KC702178.1:1-2022	764	779	Weak	Weak	None	TRUE_BIOLOGICAL	196118	1	Hyoscyamus niger mitochondrion, complete genome	8.823529412
SdnRY1_123464	1	1	138	153	uv|KY031736.1:1-4885	4430	4445	Weak	Weak	Suspect[154,170];	TRUE_BIOLOGICAL	82115	1		8.823529412
VdnRY1_121973	1	1	6	21	uv|L08862.1:2848-3728-49	492	507	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	1279	1		8.823529412
VdnRY4_15289	1	1	3	18	uv|AF379854.1:3-2710	1853	1838	Weak	Weak	Suspect[1,2];	NO_DATA	1	1	Solanum tuberosum chromosome 11 clone RH170D10, complete sequence	8.823529412
VdnRY4_34423	1	1	148	163	uv|J02459.1:1-48502-49	47685	47700	Weak	Weak	Suspect[164,170];	TRUE_BIOLOGICAL	10699	1		8.823529412
SdnRY1_124012	1	1	7	23	uv|M16192.1:1-2517-49	2151	2167	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch04, complete genome	9.467455621
SdnRY1_124440	1	1	135	151	uv|M99566.1:573-1230	615	631	Weak	Weak	Suspect[152,169];	TRUE_BIOLOGICAL	10699	1	Human DNA sequence from clone bP-21264C1 on chromosome 21, complete sequence	9.467455621
VdnRY2_47141	1	1	143	159	uv|M16192.1:1-2517-49	1371	1387	Weak	Weak	Suspect[160,169];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102579806 (LOC102579806), transcript variant X3, mRNA	9.467455621
SdnRY1_124056	1	1	153	168	uv|M33622.1:1-1483	562	577	Weak	Weak	Suspect[169,169];	TRUE_BIOLOGICAL	91347	1	Solanum pennellii chromosome ch06, complete genome	8.875739645
VdnRY1_126792	1	1	143	158	uv|AF102576.1:1-3461	3281	3296	Weak	Weak	Suspect[159,169];	NO_DATA	1	1	Solanum pennellii chromosome ch07, complete genome	8.875739645
VdnRY3_9553	1	1	20	35	uv|AY529716.1:3879-4121	74	89	Weak	Weak	Suspect[1,19];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102595274 (LOC102595274), mRNA	8.875739645
VdnRY4_78041	1	1	139	154	uv|KF718995.1:2216-3853	163	148	Weak	Weak	Suspect[155,169];	NO_DATA	1	1	PREDICTED: Solanum tuberosum putative pentatricopeptide repeat-containing protein At1g68930 (LOC102606208), mRNA	8.875739645
VdnRY2_68755	1	1	23	44	uv|JN581374.1:616-2149	1130	1109	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum WD repeat-containing protein 3-like (LOC102582969), mRNA	12.5
CLCdnRY3_75593	1	1	139	156	uv|EU496100.1:270-2269	1172	1189	Weak	Weak	Suspect[157,168];	NO_DATA	1	1	PREDICTED: Solanum tuberosum PTI1-like tyrosine-protein kinase 1 (LOC102594648), mRNA	10.11904762
CLCdnRY3_59974	1	1	133	148	uv|U89671.1:1-253	87	72	Weak	Weak	Suspect[149,168];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum pennellii MORC family CW-type zinc finger protein 3-like (LOC107008228), transcript variant X3, mRNA	8.928571429
SdnRY1_124865	1	1	24	39	uv|KC702235.1:1-872	232	217	Weak	Weak	Suspect[1,23];	TRUE_ARTIFICIAL	81077	81077	Homo sapiens chromosome 5 clone RP11-57H18, complete sequence	8.928571429
SdnRY1_124969	1	1	129	144	uv|JX901380.2:1996-2101	2	17	Weak	Weak	Suspect[145,168];	NO_DATA	1	1		8.928571429
VdnRY2_152384	1	1	10	25	uv|JX560397.1:83-5970	3794	3779	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	1236	1		8.928571429
VdnRY3_78100	1	1	131	146	uv|M28248.1:1-1709	1481	1496	Weak	Weak	Suspect[147,168];	TRUE_BIOLOGICAL	153135	1	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g26790, mitochondrial (LOC102582865), transcript variant X6, misc_RNA	8.928571429
VdnRY3_101203	1	1	129	144	uv|M16192.1:1-2517-49	1565	1550	Weak	Weak	Suspect[145,168];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum probable receptor-like serine/threonine-protein kinase At5g57670 (LOC102604262), mRNA	8.928571429
SdnRY1_125404	1	1	4	19	uv|AF379854.1:3-2710	1698	1683	Weak	Weak	Suspect[1,3];	NO_DATA	1	1		8.982035928
VdnRY1_164631	1	1	152	167	uv|U09365.1:787-1365	297	312	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum E3 ubiquitin-protein ligase UPL1-like (LOC102596804), mRNA	8.982035928
SdnRY1_126141	1	1	2	19	uv|JX573200.1:8326-8503	66	83	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	186777	1	Human DNA sequence from clone RP11-356B3 on chromosome 6, complete sequence	10.24096386
SdnRY1_126548	1	1	127	144	uv|HQ418395.1:2834-3936	774	791	Weak	Weak	Suspect[145,166];	NO_DATA	1	1	Streptococcus pneumoniae DNA, complete genome, strain: KK0981	10.24096386
CLCdnRY1_15420	1	1	143	159	uv|JN874481.1:57-2095	1241	1257	Weak	Weak	Suspect[160,166];	TRUE_BIOLOGICAL	3705	1	Homo sapiens chromosome 5 clone CTC-280C13, complete sequence	9.638554217
SdnRY1_126386	1	1	11	27	uv|M77169.1:820-5161	3739	3755	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	1485	1	Homo sapiens chromosome 17, clone RP11-354C22, complete sequence	9.638554217
SdnRY1_126686	1	1	146	162	uv|KC702202.1:1-1020	216	232	Weak	Weak	Suspect[163,166];	TRUE_BIOLOGICAL	196118	1	Homo sapiens BAC clone RP11-14M23 from 4, complete sequence	9.638554217
VdnRY1_178323	1	1	4	20	uv|AF379854.1:4263-5841	665	681	Weak	Weak	Suspect[1,3];	TRUE_BIOLOGICAL	5820	1		9.638554217
SdnRY1_126152	1	1	14	29	uv|M34298.1:3143-4604	1100	1115	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	6237	1	Solanum tuberosum patatin-rich BAC 14K07, complete sequence	9.036144578
SdnRY1_126329	1	1	138	153	uv|KC702183.1:1-1023	408	393	Weak	Weak	Suspect[154,166];	TRUE_BIOLOGICAL	196118	1	Homo sapiens calcium channel alpha1E subunit (CACNA1E) gene, partial cds, alternatively spliced	9.036144578
SdnRY1_125998	1	1	149	164	uv|KC702195.1:1-1137	27	42	Weak	Weak	Suspect[165,166];	TRUE_ARTIFICIAL	81077	81077	Dactylolabis montana 28S ribosomal RNA gene, partial sequence	9.036144578
SdnRY1_127250	1	1	12	27	uv|U89671.1:1-253	76	91	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	4930	1	Homo sapiens suppression of tumorigenicity 5 (ST5), RefSeqGene on chromosome 11	9.090909091
SdnRY1_127848	1	1	142	157	uv|JX560397.1:83-5970	3081	3066	Weak	Weak	Suspect[158,164];	TRUE_BIOLOGICAL	1236	1	Solanum demissum chromosome 5 clone PGEC446O19, complete sequence	9.146341463
VdnRY1_73774	1	1	3	18	uv|M36415.1:542-712	167	152	Weak	Weak	Suspect[1,2];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum F-box protein FBW2-like (LOC102593658), transcript variant X2, mRNA	9.146341463
VdnRY2_129299	1	1	1	28	uv|JX069762.1:9774-9902-49	86	113	Strong	Strong	None	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum tuberosum auxin-binding protein ABP19a-like (LOC102602789), mRNA	16.56441718
VdnRY2_143330	1	1	147	163	uv|K03114.1:3449-3847-44	366	350	Weak	Weak	None	TRUE_BIOLOGICAL	561	1	Solanum lycopersicum cultivar I-3 chromosome 9	9.81595092
VdnRY3_73433	1	1	23	38	uv|KC702185.1:1-522	406	391	Weak	Weak	Suspect[1,22];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum probable tyrosine-protein phosphatase At1g05000 (LOC102595747), transcript variant X3, misc_RNA	9.202453988
VdnRY4_58495	1	1	142	157	uv|KC702177.1:1-1138	108	123	Weak	Weak	Suspect[158,163];	TRUE_ARTIFICIAL	81077	81077	PREDICTED: Solanum pennellii calmodulin-binding receptor-like cytoplasmic kinase 2 (LOC107012096), transcript variant X5, mRNA	9.202453988
SdnRY1_129199	1	1	125	140	uv|KF719006.1:2204-2928	110	95	Weak	Weak	Suspect[141,162];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102592760 (LOC102592760), transcript variant X3, ncRNA	9.259259259
CLCdnRY1_60895	1	1	21	36	uv|EU545992.1:1-1076	421	406	Weak	Weak	Suspect[1,20];	NO_DATA	1	1		9.259259259
VdnRY4_73070	1	1	22	37	uv|Y09373.1:2883-2981	31	46	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum lycopersicum uncharacterized LOC101258290 (LOC101258290), transcript variant X2, mRNA	9.259259259
VdnRY1_22355	1	1	23	39	uv|EU546814.1:7770-7919	46	62	Weak	Weak	Suspect[1,22];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 2	9.937888199
VdnRY4_33664	1	1	25	41	uv|U13843.1:1887-9923	1572	1588	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	325454	1	PREDICTED: Solanum lycopersicum probable E3 ubiquitin-protein ligase XBOS32 (LOC101260355), transcript variant X2, mRNA	9.937888199
SdnRY1_129960	1	1	12	27	uv|U55760.1:1-2749	2288	2303	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	558016	1	PREDICTED: Solanum pennellii rhamnogalacturonate lyase-like (LOC107015977), transcript variant X2, mRNA	9.316770186
VdnRY1_115373	1	1	139	154	uv|AY962893.1:2004-2563	235	220	Weak	Weak	Suspect[155,161];	TRUE_BIOLOGICAL	29487	1		9.316770186
VdnRY4_41607	1	1	12	27	uv|JN874480.1:6795-9434	84	69	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	4107	1	PREDICTED: Solanum tuberosum transcription factor TCP15-like (LOC102585454), mRNA	9.316770186
VdnRY2_31680	1	1	13	29	uv|U14124.1:1-466	175	159	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein transport protein SEC23 (LOC102593721), mRNA	10
VdnRY4_73589	1	1	143	158	uv|KF719011.1:2838-2981	37	52	Weak	Weak	Suspect[159,160];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 4	9.375
VdnRY2_162179	1	1	25	40	uv|KC702192.1:1-523	204	189	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum lycopersicum kaempferol 3-O-beta-D-galactosyltransferase-like (LOC101268117), mRNA	9.375
VdnRY4_79525	1	1	2	17	uv|L08924.1:1272-1370	70	85	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum rho GDP-dissociation inhibitor 1-like (LOC102585476), mRNA	9.375
VdnRY3_79275	1	1	10	25	uv|M24184.1:1-64	33	18	Weak	Weak	Suspect[1,9];	NO_DATA	1	1	PREDICTED: Solanum tuberosum autophagy-related protein 9 (LOC102586846), transcript variant X2, mRNA	9.433962264
VdnRY3_94360	1	1	5	20	uv|L08862.1:1-2039	813	798	Weak	Weak	Suspect[1,4];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch03, complete genome	9.433962264
SdnRY1_131576	1	1	16	31	uv|M77815.1:1530-1628	95	80	Weak	Weak	Suspect[1,15];	TRUE_BIOLOGICAL	10860	1	Solanum pennellii chromosome ch04, complete genome	9.554140127
VdnRY1_158872	1	1	126	141	uv|KF718979.1:2206-6730	2029	2044	Weak	Weak	Suspect[142,157];	TRUE_BIOLOGICAL	3701	1		9.554140127
SdnRY1_131877	1	1	2	18	uv|EU186086.1:9349-10480-30	168	152	Weak	Weak	Suspect[1,1];	NO_DATA	1	1		10.25641026
VdnRY2_120318	1	1	136	152	uv|L08862.1:1-2039	800	816	Weak	Weak	Suspect[153,156];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch11, complete genome	10.25641026
SdnRY1_131877	1	1	141	156	uv|U02436.1:1330-2607	806	821	Weak	Weak	Suspect[1,1];	TRUE_BIOLOGICAL	4930	1		9.615384615
VdnRY1_219539	1	1	125	142	uv|L08862.1:2848-3728-49	74	57	Weak	Weak	Suspect[143,155];	TRUE_BIOLOGICAL	1279	1	Solanum tuberosum clone RH201H22, complete sequence	10.96774194
SdnRY1_132214	1	1	14	30	uv|KC702234.1:1-1022	284	268	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch02, complete genome	10.32258065
VdnRY3_106672	1	1	15	31	uv|J02400.1:1-5243-49	2924	2908	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	151341	1	PREDICTED: Solanum tuberosum ABC transporter G family member 22-like (LOC102592336), mRNA	10.38961039
VdnRY3_106672	1	1	16	32	uv|EF456739.1:5683-5787	88	72	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	PREDICTED: Solanum tuberosum ABC transporter G family member 22-like (LOC102592336), mRNA	10.38961039
VdnRY1_171023	1	1	131	146	uv|AF151088.1:607-1233	395	410	Weak	Weak	Suspect[147,154];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 3	9.74025974
VdnRY3_49736	1	1	114	130	uv|J02459.1:1-48502-49	47561	47545	Weak	Weak	Suspect[131,153];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum tuberosum lysM domain receptor-like kinase 3 (LOC102580283), mRNA	10.45751634
SdnRY1_133693	1	1	114	130	uv|KF719005.1:2205-5132	1812	1796	Weak	Weak	Suspect[131,152];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum FKBP12-interacting protein of 37 kDa (LOC102602351), mRNA	10.52631579
VdnRY1_162022	1	1	24	40	uv|JX560334.1:1968-3342	1116	1100	Weak	Weak	Suspect[1,23];	NO_DATA	1	1	Solanum tuberosum nematode resistance-like protein (Gro1-2) gene, Gro1-2-P40 allele, complete cds	10.52631579
VdnRY1_127769	1	1	24	39	uv|V00604.2:1-6407-49	618	603	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	10861	1		9.868421053
VdnRY2_78460	1	1	15	30	uv|U02428.1:5900-6359	406	421	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	10375	1		9.933774834
VdnRY3_9488	1	1	113	128	uv|JN900237.1:1151-3072-49	1677	1662	Weak	Weak	Suspect[129,151];	NO_DATA	1	1	PREDICTED: Solanum tuberosum shaggy-related protein kinase eta-like (LOC102581305), mRNA	9.933774834
VdnRY3_41207	1	1	12	27	uv|FJ931533.1:7978-12753-49	1693	1678	Weak	Weak	Suspect[1,11];	TRUE_BIOLOGICAL	7215	1	PREDICTED: Solanum lycopersicum GRF1-interacting factor 2-like (LOC101246804), mRNA	10
SdnRY1_135072	1	1	116	131	uv|KU936034.1:2501-3718	353	338	Weak	Weak	Suspect[132,149];	TRUE_BIOLOGICAL	1883	1	Solanum pennellii chromosome ch07, complete genome	10.06711409
VdnRY1_189808	1	1	18	33	uv|M24184.1:1-64	33	18	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum autophagy-related protein 9 (LOC102586846), transcript variant X2, mRNA	10.06711409
VdnRY2_43231	1	1	127	142	uv|NGB00587.1:1-3232	2155	2170	Weak	Weak	Suspect[143,149];	TRUE_BIOLOGICAL	1279	1	Solanum lycopersicum cultivar I-3 chromosome 1	10.06711409
SdnRY1_135293	1	1	21	37	uv|KF680545.1:1-2837	2499	2483	Weak	Weak	Suspect[1,20];	NO_DATA	1	1	PREDICTED: Solanum tuberosum wound-induced proteinase inhibitor 1-like (LOC102605542), mRNA	10.81081081
VdnRY1_117461	1	1	20	36	uv|JF909482.1:3850-8059	3868	3884	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	3701	1	Solanum pennellii chromosome ch07, complete genome	10.81081081
SdnRY1_135347	1	1	109	124	uv|KF680544.1:2357-2669	63	48	Weak	Weak	Suspect[125,148];	NO_DATA	1	1	Solanum pennellii chromosome ch05, complete genome	10.13513514
VdnRY1_127450	1	1	133	148	uv|Z22671.1:2538-2638	28	43	Weak	Weak	None	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum uncharacterized LOC102587766 (LOC102587766), mRNA	10.13513514
VdnRY2_146182	1	1	120	135	uv|LC121520.1:2705-3093	322	337	Weak	Weak	Suspect[136,148];	TRUE_BIOLOGICAL	1279	1	Solanum pennellii chromosome ch07, complete genome	10.13513514
SdnRY1_136109	1	1	20	36	uv|X70481.1:3564-4492	593	609	Weak	Weak	Suspect[1,19];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum tuberosum uncharacterized LOC107061438 (LOC107061438), ncRNA	10.88435374
VdnRY3_98736	1	1	25	41	uv|KF719004.1:2204-2946	339	355	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	3803	1	Solanum tuberosum clone RH066A20, complete sequence	10.88435374
SdnRY1_135761	1	1	15	30	uv|DQ883685.3:1-994	359	344	Weak	Weak	Suspect[1,14];	NO_DATA	1	1	Solanum pennellii chromosome ch05, complete genome	10.20408163
SdnRY1_136102	1	1	13	28	uv|KF719007.1:3148-3506	269	284	Weak	Weak	Suspect[1,12];	NO_DATA	1	1	Homo sapiens dedicator of cytokinesis 3 (DOCK3), RefSeqGene on chromosome 3	10.20408163
VdnRY2_158108	1	1	117	132	uv|U67875.1:8796-9922	714	699	Weak	Weak	Suspect[133,147];	TRUE_BIOLOGICAL	4895	1	PREDICTED: Solanum pennellii putative receptor-like protein kinase At4g00960 (LOC107009485), mRNA	10.20408163
VdnRY1_65610	1	1	122	139	uv|AY753578.1:1-838	502	485	Weak	Weak	Suspect[140,146];	TRUE_BIOLOGICAL	6181	1	Solanum lycopersicum cultivar I-3 chromosome 4	11.64383562
VdnRY3_101918	1	1	6	22	uv|KF719014.1:2590-2954	199	215	Weak	Weak	Suspect[1,5];	TRUE_BIOLOGICAL	163743	1	S.tuberosum rbcS2 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit	10.95890411
VdnRY2_104302	1	1	109	124	uv|M16192.1:1-2517-49	1223	1208	Weak	Weak	Suspect[125,146];	TRUE_BIOLOGICAL	1279	1		10.2739726
VdnRY1_69403	1	1	115	130	uv|AF379854.1:3-2710	1905	1890	Weak	Weak	Suspect[131,146];	NO_DATA	1	1	PREDICTED: Solanum tuberosum sodium-coupled neutral amino acid transporter 2 (LOC102581955), mRNA	10.2739726
VdnRY1_202872	1	1	124	139	uv|KP064031.1:296-391	44	59	Weak	Weak	Suspect[140,146];	NO_DATA	1	1		10.2739726
VdnRY1_211198	1	1	120	135	uv|U89960.1:4738-7717	1483	1498	Weak	Weak	Suspect[136,145];	TRUE_BIOLOGICAL	4892	1	Solanum lycopersicum cultivar I-3 chromosome 7	10.34482759
VdnRY3_48886	1	1	1	16	uv|X65279.1:5941-7353	457	442	Weak	Weak	None	NO_DATA	1	1	PREDICTED: Solanum tuberosum probable Ufm1-specific protease (LOC102603289), mRNA	10.34482759
SdnRY1_137180	1	1	125	141	uv|KF718994.1:2210-3019	483	499	Weak	Weak	Suspect[142,144];	NO_DATA	1	1	Solanum pennellii chromosome ch09, complete genome	11.11111111
VdnRY3_93803	1	1	2	18	uv|JX560390.1:3189-3283	54	38	Weak	Weak	Suspect[1,1];	NO_DATA	1	1	Solanum demissum chromosome 11 clone PGEC400L14, complete sequence	11.11111111
VdnRY1_78984	1	1	127	142	uv|GU339046.1:5854-6432-49	512	497	Weak	Weak	Suspect[143,144];	TRUE_BIOLOGICAL	4930	1		10.41666667
VdnRY1_124806	1	1	13	28	uv|DQ391279.1:1-10285	577	562	Weak	Weak	Suspect[1,12];	TRUE_BIOLOGICAL	308911	1	Solanum lycopersicum cultivar I-3 chromosome 10	10.41666667
VdnRY3_116706	1	1	22	37	uv|M98046.1:2386-3803	818	803	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	4930	1	Solanum lycopersicum cultivar I-3 chromosome 1	10.41666667
SdnRY1_137680	1	1	8	23	uv|KM407512.1:886-4985	3219	3204	Weak	Weak	Suspect[1,7];	TRUE_BIOLOGICAL	4930	1	Solanum pennellii chromosome ch03, complete genome	10.48951049
VdnRY2_205129	1	1	121	136	uv|KP064031.1:296-391	44	59	Weak	Weak	Suspect[137,143];	NO_DATA	1	1		10.48951049
VdnRY1_160917	1	1	21	37	uv|J02459.1:1-48502-49	16089	16073	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	10699	1	PREDICTED: Solanum lycopersicum alpha-aminoadipic semialdehyde synthase (LOC101261722), mRNA	11.26760563
VdnRY3_104032	1	1	114	130	uv|JQ927446.1:4885-6835-49	396	412	Weak	Weak	Suspect[138,142];	NO_DATA	1	1	Solanum pennellii chromosome ch09, complete genome	11.26760563
VdnRY1_144736	1	1	21	36	uv|U13864.1:2748-4229-44	1441	1456	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	1279	1		10.56338028
VdnRY1_153414	1	1	123	138	uv|HM162846.2:614-1656	553	538	Weak	Weak	Suspect[139,142];	TRUE_BIOLOGICAL	5690	1		10.56338028
VdnRY1_61001	1	1	7	22	uv|KM407512.1:886-4985	3641	3656	Weak	Weak	Suspect[1,6];	TRUE_BIOLOGICAL	4930	1	PREDICTED: Solanum pennellii putative late blight resistance protein homolog R1B-16 (LOC107020439), transcript variant X4, mRNA	10.56338028
VdnRY3_104032	1	1	122	137	uv|KC702174.1:1-273	211	226	Weak	Weak	Suspect[138,142];	TRUE_BIOLOGICAL	196118	1	Solanum pennellii chromosome ch09, complete genome	10.56338028
VdnRY2_82246	1	1	101	117	uv|KC702209.1:1-2022	1013	997	Weak	Weak	Suspect[118,141];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum disease resistance protein At4g27190-like (LOC102597994), transcript variant X3, mRNA	11.34751773
VdnRY2_173220	1	1	22	38	uv|AF379854.1:3-2710	1091	1075	Weak	Weak	Suspect[1,21];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC107058113 (LOC107058113), ncRNA	11.34751773
VdnRY2_171549	1	1	115	130	uv|KF719005.1:2205-5132	180	165	Weak	Weak	Suspect[131,141];	TRUE_BIOLOGICAL	3701	1		10.63829787
VdnRY1_51061	1	1	115	130	uv|M77169.1:820-5161	1232	1217	Weak	Weak	Suspect[131,139];	TRUE_BIOLOGICAL	1485	1	Solanum lycopersicum cultivar I-3 chromosome 4	10.79136691
SdnRY1_140104	1	1	102	118	uv|U89960.1:3-1162	90	106	Weak	Weak	Suspect[119,138];	TRUE_BIOLOGICAL	4892	1	Solanum lycopersicum cultivar I-3 chromosome 12	11.5942029
VdnRY2_139532	1	1	21	37	uv|KC702185.1:1-522	194	210	Weak	Weak	Suspect[1,20];	TRUE_BIOLOGICAL	196118	1	Solanum lycopersicum cultivar I-3 chromosome 9	11.5942029
SdnRY1_140662	1	1	18	33	uv|AF327711.1:665-1379	253	268	Weak	Weak	Suspect[1,17];	NO_DATA	1	1		10.94890511
SdnRY1_140905	1	1	120	135	uv|KC702193.1:1-1136	261	276	Weak	Weak	Suspect[136,137];	TRUE_ARTIFICIAL	81077	81077	Solanum pennellii chromosome ch10, complete genome	10.94890511
VdnRY1_97358	1	1	116	131	uv|AF327712.1:16794-18581	432	447	Weak	Weak	Suspect[132,137];	NO_DATA	1	1	PREDICTED: Solanum tuberosum protein STRUBBELIG-RECEPTOR FAMILY 7-like (LOC102588848), mRNA	10.94890511
VdnRY2_105741	1	1	6	23	uv|LC121524.1:7013-8404-8	1181	1164	Weak	Weak	Suspect[1,5];	NO_DATA	1	1		12.59259259
VdnRY1_83971	1	1	17	32	uv|AY390769.1:1-1000	847	832	Weak	Weak	Suspect[1,16];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 5	11.11111111
VdnRY1_31211	1	1	15	30	uv|KM407509.1:3217-4703	807	822	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	40674	1	PREDICTED: Solanum tuberosum photosynthetic NDH subunit of lumenal location 4, chloroplastic (LOC102582493), transcript variant X3, mRNA	11.11111111
VdnRY3_16336	1	1	99	114	uv|KC702184.1:1-1156	1008	1023	Weak	Weak	Suspect[115,135];	TRUE_ARTIFICIAL	81077	81077	Solanum lycopersicum cultivar I-3 chromosome 3	11.11111111
SdnRY1_142473	1	1	14	30	uv|KF719005.1:2205-5132	1811	1795	Weak	Weak	Suspect[1,13];	TRUE_BIOLOGICAL	3701	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604388 (LOC102604388), transcript variant X8, ncRNA	11.94029851
VdnRY3_20675	1	1	10	26	uv|KY031725.1:1-5101	597	613	Weak	Weak	Suspect[1,9];	TRUE_BIOLOGICAL	82115	1	PREDICTED: Solanum tuberosum non-lysosomal glucosylceramidase-like (LOC102582522), mRNA	12.03007519
VdnRY3_40271	1	1	100	115	uv|U70022.1:1437-1533	59	44	Weak	Weak	Suspect[116,133];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 3	11.27819549
SdnRY1_143217	1	1	25	41	uv|L08862.1:1-2039	1021	1005	Weak	Weak	Suspect[1,24];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum COBRA-like protein 7 (LOC102583248), mRNA	12.12121212
VdnRY3_87328	1	1	110	125	uv|Z32692.1:2323-5137	2574	2589	Weak	Weak	Suspect[126,131];	TRUE_BIOLOGICAL	620	1	PREDICTED: Solanum tuberosum acyl-CoA--sterol O-acyltransferase 1-like (LOC102603295), mRNA	11.45038168
VdnRY2_216078	1	1	22	37	uv|U59231.1:880-989	12	27	Weak	Weak	Suspect[1,21];	TRUE_BIOLOGICAL	10699	1		11.53846154
VdnRY1_196635	1	1	18	33	uv|AY568055.1:6692-7837	425	410	Weak	Weak	Suspect[1,17];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102598848 (LOC102598848), mRNA	11.71875
VdnRY1_50529	1	1	6	22	uv|AY599229.2:681-868	151	135	Weak	Weak	Suspect[1,5];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102589471 (LOC102589471), transcript variant X3, mRNA	12.90322581
VdnRY1_72715	1	1	9	24	uv|Z32692.1:1-221	110	95	Weak	Weak	Suspect[1,8];	TRUE_BIOLOGICAL	10242	1	Solanum lycopersicum cultivar I-3 chromosome 5	12.09677419
VdnRY2_179508	1	1	89	104	uv|M16192.1:1-2517-49	1740	1725	Weak	Weak	Suspect[105,119];	TRUE_BIOLOGICAL	1279	1	PREDICTED: Solanum tuberosum autophagy-related protein 101 (LOC102595815), mRNA	12.60504202
VdnRY1_13832	1	1	84	100	uv|AY962893.1:2004-2563	53	69	Weak	Weak	Suspect[101,118];	NO_DATA	1	1		13.55932203
VdnRY1_52287	1	1	19	34	uv|JX181778.1:10266-10316-48	5	20	Weak	Weak	Suspect[1,18];	NO_DATA	1	1	Solanum pennellii chromosome ch03, complete genome	12.71186441
VdnRY2_61395	1	1	97	112	uv|V00604.2:1-6407-49	4230	4215	Weak	Weak	Suspect[113,118];	TRUE_BIOLOGICAL	10861	1		12.71186441
VdnRY1_165420	1	1	11	27	uv|DQ391279.1:1-10285	988	972	Weak	Weak	Suspect[1,10];	TRUE_BIOLOGICAL	308911	1	PREDICTED: Solanum tuberosum UDP-glucose iridoid glucosyltransferase-like (LOC102606006), mRNA	13.67521368
VdnRY2_112314	1	1	83	98	uv|DQ883669.3:1-844	29	14	Weak	Weak	Suspect[99,112];	NO_DATA	1	1	Solanum pennellii chromosome ch08, complete genome	13.39285714
VdnRY2_185302	1	1	78	93	uv|JX310867.1:868-3760	2449	2464	Weak	Weak	Suspect[94,112];	TRUE_BIOLOGICAL	1224	1		13.39285714
VdnRY2_22217	1	1	88	103	uv|AF379854.1:4263-5841	1550	1535	Weak	Weak	Suspect[104,111];	NO_DATA	1	1	PREDICTED: Solanum tuberosum uncharacterized LOC102604489 (LOC102604489), mRNA	13.51351351
VdnRY1_218476	1	1	88	104	uv|FJ750577.1:368-2560	1970	1986	Weak	Weak	Suspect[105,109];	TRUE_BIOLOGICAL	4447	1	Solanum pennellii chromosome ch10, complete genome	14.67889908
VdnRY1_145293	1	1	83	98	uv|DQ883653.3:1-644	45	60	Weak	Weak	Suspect[99,109];	NO_DATA	1	1	Solanum pennellii chromosome ch06, complete genome	13.76146789
VdnRY2_60780	1	1	15	30	uv|KF853601.1:1021-3588	400	385	Weak	Weak	Suspect[1,14];	TRUE_BIOLOGICAL	7711	1	Solanum lycopersicum cultivar I-3 chromosome 8	14.01869159
VdnRY2_151723	1	1	82	97	uv|GU593055.1:13024-13902-49	212	197	Weak	Weak	Suspect[98,106];	NO_DATA	1	1		14.1509434
VdnRY2_225591	1	1	72	88	uv|KC702178.1:1-2022	653	669	Weak	Weak	Suspect[89,105];	TRUE_BIOLOGICAL	196118	1	PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 11 (LOC102578769), mRNA	15.23809524
VdnRY1_21913	1	1	24	45	uv|JN581377.1:1749-2242	202	181	Weak	Weak	Suspect[1,23];	TRUE_BIOLOGICAL	4930	1	Homo sapiens chromosome 11, clone RP11-6K5, complete sequence	20.79207921
VdnRY1_219655	1	1	77	93	uv|U02436.1:3152-4436	661	645	Weak	Weak	Suspect[94,101];	TRUE_BIOLOGICAL	4930	1	Homo sapiens BAC clone RP11-213A7 from 4, complete sequence	15.84158416
VdnRY1_60281	1	1	83	98	uv|M28829.1:1-8684-49	8525	8540	Weak	Weak	Suspect[99,101];	TRUE_BIOLOGICAL	620	1	Solanum lycopersicum cultivar I-3 chromosome 5	14.85148515
VdnRY1_85135	1	1	86	101	uv|AB777652.1:5733-7306-49	1522	1507	Weak	Weak	None	NO_DATA	1	1	Human DNA sequence from clone RP11-483I8 on chromosome 1, complete sequence	14.85148515
VdnRY1_151406	1	1	81	96	uv|AY568055.1:6692-7837	188	173	Weak	Weak	Suspect[97,101];	NO_DATA	1	1		14.85148515
VdnRY1_183951	1	1	62	77	uv|KF718979.1:2206-6730	611	596	Weak	Weak	Suspect[78,101];	TRUE_BIOLOGICAL	3701	1	Homo sapiens chromosome 5 clone CTD-2541N22, complete sequence	14.85148515
VdnRY1_190548	1	1	80	95	uv|KF719005.1:2205-5132	2200	2215	Weak	Weak	Suspect[96,101];	TRUE_BIOLOGICAL	3701	1		14.85148515
VdnRY1_205704	1	1	71	86	uv|KC614689.1:4213-4921	596	581	Weak	Weak	Suspect[87,101];	TRUE_BIOLOGICAL	4930	1		14.85148515
VdnRY1_207703	1	1	70	85	uv|DQ493886.2:2848-2947	28	43	Weak	Weak	Suspect[86,101];	NO_DATA	1	1	Solanum lycopersicum cultivar I-3 chromosome 1	14.85148515
CLCdnRY12_3429	1	1	2219	2877	uv|JF909478.1:3849-4965	1117	455	Strong	Strong	Suspect[1928,1942];	-	-	-	Pseudomonas sp. MC1 plasmid KOPRI126573, complete sequence	22.87104623
CLCdnRY12_3429	1	1	1946	2774	uv|U28417.1:1-944	853	25	Strong	Strong	Suspect[1928,1942];	-	-	-	Pseudomonas sp. MC1 plasmid KOPRI126573, complete sequence	28.77997914
CLCdnRY12_3429	1	1	1943	2084	uv|KM062046.1:3232-3441	142	1	Strong	Strong	Suspect[1928,1942];	-	-	-	Pseudomonas sp. MC1 plasmid KOPRI126573, complete sequence	4.900938478
CLCdnRY12_3429	1	1	1877	1927	uv|JQ394799.1:1-1559	1264	1214	Strong	Strong	Suspect[1928,1942];	-	-	-	Pseudomonas sp. MC1 plasmid KOPRI126573, complete sequence	1.737921446
CLCdnRY1_10059	1	1	1	3839	uv|J02482.1:1-5386-49	1597	5435	Strong	Strong	None	-	-	-	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	71.52441297
CLCdnRY1_10059	1	1	3791	5366	uv|J02482.1:1-5386-49	1	1576	Strong	Strong	None	-	-	-	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	29.35147223
VdnRY2_5314	1	1	1911	2078	uv|J02482.1:1-5386-49	2836	2669	Strong	Strong	None	-	-	-	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	8.036573628
VdnRY2_5314	1	1	1	761	uv|J02482.1:1-5386-49	4240	3480	Strong	Strong	None	-	-	-	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	36.57362849
VdnRY2_5314	1	1	762	1910	uv|J02482.1:1-5386-49	3511	2363	Strong	Strong	None	-	-	-	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	55.2454283
VdnRY2_41166	1	1	1	1440	uv|J02482.1:1-5386-49	1440	1	Strong	Strong	None	-	-	-	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	79.15291529
VdnRY2_41166	1	1	1392	1818	uv|J02482.1:1-5386-49	5435	5009	Strong	Strong	None	-	-	-	Anderseniella sp. Alg231_50 genome assembly, chromosome: VII	23.43234323
CLCdnRY10_6444	1	1	1441	1483	uv|JX025643.1:5074-5255	140	182	Strong	Strong	None	-	-	-	PREDICTED: Solanum tuberosum probable leucine-rich repeat receptor-like protein kinase At5g49770 (LOC102592051), transcript variant X2, mRNA	1.089776855
CLCdnRY7_8889	1	1	4	23	uv|KC702201.1:1-1023	59	78	Moderate	Moderate	Suspect[1,3];Suspect[1868,1869];	-	-	-	PREDICTED: Solanum tuberosum uncharacterized LOC102581582 (LOC102581582), transcript variant X4, mRNA	1.01658641
CLCdnRY7_8889	1	1	1852	1867	uv|KM407512.1:886-4985	2451	2436	Weak	Moderate	Suspect[1,3];Suspect[1868,1869];	-	-	-	PREDICTED: Solanum tuberosum uncharacterized LOC102581582 (LOC102581582), transcript variant X4, mRNA	0.802568218
SdnRY1_26686	1	1	17	35	uv|U47120.2:791-908	50	68	Moderate	Moderate	Suspect[1,16];	-	-	-	P.megasperma gene for 28S ribosomal RNA	1.611459266
CLCdnRY10_15608	1	1	16	31	uv|AY568055.1:9139-10024	370	385	Weak	Weak	Suspect[1,15];	-	-	-	PREDICTED: Solanum tuberosum G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 (LOC102593539), mRNA	0.891795482
CLCdnRY10_23126	1	1	4078	4093	uv|AH003157.2:1-83	68	83	Weak	Weak	Suspect[4094,4111];	-	-	-	PREDICTED: Solanum tuberosum lysine-specific demethylase 5B (LOC102601233), mRNA	0.364874726
CLCdnRY10_68941	1	1	14	30	uv|U74374.1:2356-2450-49	46	62	Weak	Weak	Suspect[1,13];	-	-	-	PREDICTED: Solanum tuberosum TMV resistance protein N-like (LOC102604473), transcript variant X3, mRNA	0.775945684
CLCdnRY10_80169	1	1	11	26	uv|KC702228.1:1-1023	82	67	Weak	Weak	Suspect[1,10];	-	-	-	PREDICTED: Solanum tuberosum uncharacterized LOC102584423 (LOC102584423), mRNA	1.628664495
CLCdnRY10_80252	1	1	3308	3324	uv|U74374.1:2356-2450-49	62	46	Weak	Weak	Suspect[3325,3337];	-	-	-	PREDICTED: Solanum tuberosum TMV resistance protein N-like (LOC102604473), transcript variant X3, mRNA	0.47947258
CLCdnRY11_23077	1	1	3985	4000	uv|AH003157.2:1-83	68	83	Weak	Weak	Suspect[4001,4018];	-	-	-	PREDICTED: Solanum tuberosum lysine-specific demethylase 5B (LOC102601233), mRNA	0.37332006
CLCdnRY11_31301	1	1	1	16	uv|KM407506.1:2354-4632	1012	997	Weak	Weak	None	-	-	-	PREDICTED: Solanum tuberosum pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like (LOC102579611), transcript variant X6, mRNA	1.109467456
CLCdnRY11_88812	1	1	1963	1978	uv|JF909481.1:3855-5640	1104	1089	Weak	Weak	Suspect[1979,1999];	-	-	-	PREDICTED: Solanum tuberosum BRCT domain-containing protein At4g02110-like (LOC102603882), mRNA	0.750375188
CLCdnRY12_50253	1	1	1528	1543	uv|NGB00403.1:5427-5525	36	21	Weak	Weak	Suspect[1544,1564];	-	-	-	PREDICTED: Solanum tuberosum uncharacterized LOC102583696 (LOC102583696), transcript variant X3, mRNA	0.959079284
CLCdnRY12_67875	1	1	2665	2680	uv|JF909482.1:3850-8059	2063	2078	Weak	Weak	Suspect[2681,2681];	-	-	-	PREDICTED: Solanum tuberosum HEAT repeat-containing protein 5B (LOC102605599), transcript variant X2, mRNA	0.559492727
CLCdnRY1_45365	1	1	739	756	uv|DQ883671.3:1-992	74	57	Weak	Weak	Suspect[757,762];	-	-	-	Solanum pennellii chromosome ch08, complete genome	2.230971129
CLCdnRY3_17929	1	1	3559	3574	uv|KF853602.1:1019-2932	1316	1331	Weak	Weak	Suspect[3575,3579];	-	-	-	PREDICTED: Solanum tuberosum sucrose nonfermenting 4-like protein (LOC102602555), transcript variant X1, mRNA	0.419111484
CLCdnRY7_37078	1	1	705	721	uv|J02459.1:1-48502-49	7744	7728	Weak	Weak	Suspect[722,729];	-	-	-	PREDICTED: Solanum tuberosum chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (LOC102587090), transcript variant X2, mRNA	2.19478738
CLCdnRY9_35502	1	1	12	27	uv|AF234290.1:3149-3247	48	33	Weak	Weak	Suspect[1,11];	-	-	-	PREDICTED: Solanum lycopersicum uncharacterized LOC101254642 (LOC101254642), mRNA	1.450676983
SdnRY1_1678	1	1	8	25	uv|KC702228.1:1-1023	507	490	Weak	Weak	Suspect[1,7];	-	-	-	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-3 (LOC102590906), transcript variant X2, mRNA	0.501919102
SdnRY1_1702	1	1	8	25	uv|KC702228.1:1-1023	507	490	Weak	Weak	Suspect[1,7];	-	-	-	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-3 (LOC102592255), transcript variant X4, mRNA	0.504151839
SdnRY1_2497	1	1	8	25	uv|KC702228.1:1-1023	507	490	Weak	Weak	Suspect[1,7];	-	-	-	PREDICTED: Solanum tuberosum putative late blight resistance protein homolog R1A-3 (LOC102590906), transcript variant X2, mRNA	0.551589877
SdnRY1_3875	1	1	1	17	uv|KF680544.1:323-942	176	192	Weak	Weak	None	-	-	-	PREDICTED: Solanum tuberosum VHS domain-containing protein At3g16270 (LOC102588435), mRNA	0.583941606
SdnRY1_5076	1	1	12	27	uv|M77169.1:820-5161	1217	1232	Weak	Weak	Suspect[1,11];	-	-	-	Solanum pennellii chromosome ch05, complete genome	0.594059406
SdnRY1_7201	1	1	2221	2236	uv|JX560397.1:83-5970	633	618	Weak	Weak	Suspect[2237,2250];	-	-	-	Solanum pennellii chromosome ch08, complete genome	0.666666667
SdnRY1_13566	1	1	1706	1723	uv|AF061931.1:630-934	245	262	Weak	Weak	Suspect[1724,1743];	-	-	-	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g36240 (LOC102604446), transcript variant X4, mRNA	0.975329891
SdnRY1_19126	1	1	4	19	uv|J02482.1:1-5386-49	1759	1744	Weak	Weak	Suspect[1,3];	-	-	-	PREDICTED: Solanum tuberosum phosphomannomutase (LOC102589310), transcript variant X2, mRNA	1.036627505
VdnRY1_1363	1	1	1	16	uv|HM162846.2:4343-4724	143	158	Weak	Weak	None	-	-	-	PREDICTED: Solanum tuberosum oxygen-evolving enhancer protein 1, chloroplastic (LOC102577458), mRNA	2.032520325
VdnRY3_10402	1	1	18	33	uv|KC702178.1:1-2022	442	457	Weak	Weak	Suspect[1,17];	-	-	-	PREDICTED: Solanum tuberosum uncharacterized LOC102589913 (LOC102589913), mRNA	1.298701299
VdnRY3_13585	1	1	21	36	uv|J01636.1:1-7477	3320	3305	Weak	Weak	Suspect[1,20];	-	-	-	PREDICTED: Solanum tuberosum elongation factor 2 (LOC102596567), mRNA	1.29982669
VdnRY5_25826	1	1	854	870	uv|KC702231.1:1-1021	83	67	Weak	Weak	Suspect[871,873];	-	-	-	PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At4g18975, chloroplastic (LOC102578676), transcript variant X1, mRNA	1.832760596
PBdnRY1_144	1	1	6	21	uv|KC614689.1:1-590	88	103	Weak	Weak	Suspect[1,5];	-	-	-	PREDICTED: Solanum tuberosum uncharacterized LOC102597217 (LOC102597217), transcript variant X1, mRNA	0.717703349
PBdnRY1_144	1	1	20	35	uv|KC702237.1:1-1024	978	963	Weak	Weak	Suspect[1,5];	-	-	-	PREDICTED: Solanum tuberosum uncharacterized LOC102597217 (LOC102597217), transcript variant X1, mRNA	0.717703349
PBdnRY1_2106	1	1	19	34	uv|Z22761.1:1-5585	2343	2328	Weak	Weak	Suspect[1,18];	-	-	-	PREDICTED: Solanum tuberosum U-box domain-containing protein 26-like (LOC102587805), mRNA	0.907441016
PBdnRY1_2675	1	1	1990	2005	uv|X06779.1:1-4734	230	215	Weak	Weak	Suspect[2006,2013];	-	-	-	Solanum pennellii chromosome ch02, complete genome	0.745156483
PBdnRY1_4603	1	1	3893	3908	uv|X70481.1:3564-4492	556	571	Weak	Weak	Suspect[3909,3922];	-	-	-	PREDICTED: Solanum tuberosum uncharacterized LOC102595832 (LOC102595832), mRNA	0.38245793
PBdnRY1_6980	1	1	12	27	uv|KF718989.1:2199-3181	125	110	Weak	Weak	Suspect[1,11];	-	-	-	PREDICTED: Solanum tuberosum probable receptor-like protein kinase At1g67000 (LOC102605277), mRNA	0.662251656
PBdnRY1_6993	1	1	3042	3058	uv|NGB00587.1:1-3232	2066	2050	Weak	Weak	Suspect[3059,3061];	-	-	-	PREDICTED: Solanum tuberosum nuclear poly(A) polymerase 1 (LOC102594846), mRNA	0.522704998
PBdnRY1_9667	1	1	20	35	uv|J02459.1:1-48502-49	4623	4608	Weak	Weak	Suspect[1,19];	-	-	-	PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 32 (LOC102583283), mRNA	0.580270793
PBdnRY1_11647	1	1	1	16	uv|Z32692.1:2323-5137	246	231	Weak	Weak	None	-	-	-	PREDICTED: Solanum tuberosum blue-light photoreceptor PHR2 (LOC102601320), mRNA	0.846979108
PBdnRY1_12397	1	1	20	35	uv|JX025642.1:5090-5607	173	188	Weak	Weak	Suspect[1,19];	-	-	-	PREDICTED: Solanum tuberosum conserved oligomeric Golgi complex subunit 5 (LOC102600086), mRNA	0.507270883
PBdnRY1_13140	1	1	1546	1561	uv|KC702231.1:1-1021	541	556	Weak	Weak	Suspect[1562,1568];	-	-	-	PREDICTED: Solanum pennellii zeatin O-glucosyltransferase-like (LOC107004845), mRNA	0.956632653