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FAIRDOM73 Independent Projects18 SysMO11 LiSyM - Systems Medicine of the Liver8 Disease Maps8 de.NBI Systems Biology Service Center (de.NBI-SysBio)7 German Association for Medical Informatics, Biometry and Epidemiology (GMDS)7 COMBINE (Computational Modeling in Biology Network)6 The Digital Salmon5 e:Bio4 ERASysAPP4 Era CoBioTech4 nfdi4health - German National Research Data Infrastructure for Personal Health Data4 FAIR Biocatalysis4 NIBSys3 dCod 1.0: decoding systems toxicology of cod3 e:med3 SARCHI: Mechanistic modelling of health and epidemiology2 Model repository for M4 (Make Me My Model) clients of ISBE2 MS_DILI2 ILVO test2 ERNEST - European Research Network on Signal Transduction2 Drug development for neglected parasitic diseases2 DFG founded projects2 EU Projects2 Journals1 HUMET1 Centre for Engineering Biology (prev. SynthSys)1 BioZEment1 DLN - OXYMOD1 Innate immunity1 BlueBio ERA-NET COFUND1 Test program1 Hallmarks of cancer 1 Cancer drug discovery preclinical research1 M-era.Net 3D4D21 NL-Bioimaging: FAIR-DM 1 COST ACTION CA21111 - OneHealthdrugs (One Health drugs against parasitic vector borne diseases in Europe and beyond) 1 More...

FAIRDOM user meeting45 FAIRDOM31 FAIRDOM Community Workers15 SysMO DB9 COVID-19 Disease Map8 Kinetics on the move - Workshop 20167 GMDS Project Group "FAIRe Dateninfrastrukturen für die Biomedizinische Informatik"7 SDBV/HITS7 ICYSB 2015 - International Practical Course in Systems Biology6 FAIRDOM & LiSyM & de.NBI Data Structuring Training6 GenoSysFat5 DigiSal5 Example use cases5 Chronic Liver Disease Progression (LiSyM-DP - Pillar II)4 Regeneration and Repair in Acute-on-Chronic Liver Failure (LiSyM-ACLF - Pillar III)4 LiSyM Core Infrastructure and Management (LiSyM-PD)4 Multi-Scale Models for Personalized Liver Function Tests (LiSyM-MM-PLF)4 COMBINE Multicellular Modelling4 EnzymeML4 COVID-19 related studies and tools in Germany4 nfdi4health - German National Research Data Infrastructure for Personal Health Data4 ModeleXchange initiative4 SysMO-LAB3 de.NBI-SysBio3 Early Metabolic Injury (LiSyM-EMI - Pillar I)3 Liver Function Diagnostics (LiSyM-LiFuDi - Pillar IV)3 Model Guided Pharmacotherapy In Chronic Liver Disease (LiSyM-MGP)3 The Hedgehog Signalling Pathway (LiSyM-JGMMS)3 Molecular Steatosis - Imaging & Modeling (LiSyM-MSIM)3 SBEpo - Systems Biology of Erythropoietin3 Systems toxicology of Atlantic cod3 SNAPPER: Synergistic Neurotoxicology APP for Environmental Regulation3 BioCreative VII3 SABIO-VIS3 SulfoSys2 Whole body modelling of glucose metabolism in malaria patients2 Service to URV Tarragona, Spain with respect to their Safety Assessment of Endocrine Disrupting Chemicals model (Active NOW)2 SEEK tutorial for DigiSal2 MS_DILI2 EraCoBiotech 2 nd call proposal preparation2 MESI-STRAT2 INCOME2 HOTSOLUTE2 INDIE - Biotechnological production of sustainable indole2 PoLiMeR - Polymers in the Liver: Metabolism and Regulation2 SCyCode The Autotrophy-Heterotrophy Switch in Cyanobacteria: Coherent Decision-Making at Multiple Regulatory Layers2 _p_stRT2 Genetic diversity and forage yield of perennial ryegrass2 MIX-UP2 Mechanism based modeling viral disease ( COVID-19 ) dynamics in human population2 ERNEST Mapping Group Pilot Study2 NMTrypI - New Medicines for Trypanosomatidic Infections2 Modelling COVID-19 epidemics2 CC-TOP2 The BeeProject2 MESI-STRAT Review2 TestingSeek2 MESI-Review 20242 EDITH (Ecosystem Digital Twins in Health) test project2 PSYSMO1 MOSES1 SulfoSys - Biotec1 Manchester Institute for Biotechnology1 IMOMESIC1 SYSTERACT1 LEANPROT1 ZucAt1 Molecular Systems Biology1 ErasysApp Funders1 HUMET Startup1 INBioPharm1 HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato1 pISA-tree1 Service to Milano-Bicocca with respect to their ATP-ROS model (Active NOW)1 Make Me My Model1 Service to University of Lisbon (Portugal) with respect to their CFTR maturation model (Active NOW)1 Service to LCSB (Luxembourg) with respect to ROS management in Parkinson’s disease and cancer model (Active NOW)1 Service to Universidade Católica Portugues with respect to their Molecular Insight into Autism Spectrum Disorder (ASD) model (Active NOW)1 Service to Slovenia with respect to their Protease signaling network in neurodegeneration model (Active NOW)1 Service to University of Duisburg- Essen (Germany): with respect to their The Yin-Yang of Metabolism; Endometatoxicity (YYME) model (Active NOW)1 Service to Sheffield University (UK): with respect to Mitochondrial perfect adaptation model (Active NOW)1 Service to Sanquin (Amsterdam): with respect to Modelling of acute and chronic inflammation (Prospective)1 Service to Munich (Germany): with respect toCharged peptide to charged membrane binding model (Prospective)1 Training Hunfeld1 WG Infrastructure for Translational Research1 MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection1 BioZEment 2.01 OXYMOD1 Sustainable co-production1 Multiscale modelling of state transitions in the host-microbiome-brain network1 ROS detailed model for MSB manucript1 BESTER1 SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture1 Rhodolive1 Steroid biosynthesis1 TRALAMINOL1 Extremophiles metabolsim1 Yeast glycolytic oscillations1 PlaSMo model repository1 OLCIR: Optimization of Lung Cancer Therapy with Ionizing Radiation1 Computational pathway design for biotechnological applications1 NAD COMPARTMENTATION1 Stress granules1 Perennial ryegrass1 AquaHealth (ERA-BlueBio)1 Testing FairdomHub functionality1 Study of Pleiomorphic Ensembles1 Hidden project1 Hidden project 21 Standardization of enzyme-catalyzed reaction measurement1 Standardization of enzyme-catalyzed reaction modelling1 ADAPT - Accelerated Development of multiple-stress tolerAnt PoTato1 Consensus Hallmark Annotation1 CoVIDD - Coronavirus interactions in drug discovery - optimization and implementation1 Mass spectrometry proteomics for biomarker discovery1 SASKit: Senescence-Associated Systems diagnostics Kit for cancer and stroke1 WP 3: Drug release kinetics study1 Project Coordination1 Thymidylate synthase dimer dissociation1 SDBV ephemeral data exchanges1 DigiSal-BT81211 NL-Bioimaging FAIR Metadata Templates1 WG1 - Compound libraries coordination and integration of compound design1 WG2 - Integration of early phase studies and low environmental impact actions1 WG3 - Coordination of in vitro-to-in vivo translation of OneHealth leads and candidates1 WG4 - Integration of R&D process-environmental studies and translation in informed whitepaper1 WG5 - Promote dissemination1 WG6 - Promote the transfer of knowledge1 Cell4Chem1 FAIR Functional Enrichment1 Glucose metabolism in cancer cell lines1 Semantic Table Interpretation in Chemistry1 ToxiGen - Reproductive toxicity and transgenerational effects of petroleum mixtures in fish1 Test project May 20241 Benefit for All FAIR Data1 Project Test1 DeepCurate1 BioTarget Database1 Compound Data1 CureQ demo1 More...

Heidelberg Institute for Theoretical Studies10 University of Manchester - Department of Computer Science10 Manchester Centre for Integrative Systems Biology, University of Manchester6 University of Edinburgh4 ETH Zurich & Basel / The Scientific IT Services (SIS) division3 University of Bergen3 University of Zürich3 University of Leiden2 Norwegian University of Life Sciences2 IDIBAPS2 KAIST2 University of Ghent2 Institute of Physiology Academy of Sciences1 Imperial College London1 Humboldt-Universität zu Berlin1 VU University Amsterdam1 Norwegian University of Science and Technology1 SINTEF1 University of Amsterdam1 University of Greifswald1 University of Rostock1 University of Stellenbosch1 German Cancer Research Center (DKFZ)1 ETH Zurich1 University of Luxembourg1 Charité University Medicine Berlin1 Lund University1 Latvia University of Agriculture1 Stellenbosch University1 FAIRDOM User meeting1 SYSBIO - Centre of Systems Biology1 Institute of Cytology and Genetics SB RAS1 Humboldt University Berlin1 Unicamp - University of Campinas1 MDC/BIMSB1 CSIC1 Centre for Digital Life Norway1 IDAEA-CSIC1 Vall d'Hebron Institut de Recerca (VHIR)1 Peter MacCallum Cancer Centre1 Standigm1 Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences1 Institute of Microbiology and Biotechnology, University of Latvia1 Nazarbayev University1 Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark1 ZonMw1 UPF1 Caltech1 JAPAN TOBACCO INC1 IDIBELL1 CEIT1 National Institute of Biology1 Infrastructure Systems Biology Europe1 University Medical Center Göttingen1 Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute (HKI)1 University of Innsbruck1 University of Connecticut1 Luxembourg Centre for Systems Biomedicine (LCSB)1 Amsterdam UMC1 LIACS1 University of Manchester1 More...

United Kingdom17 Germany16 Spain8 Norway8 Switzerland6 Netherlands4 South Korea3 Belgium2 United States2 Austria1 Australia1 Brazil1 Czechia1 Denmark1 Italy1 Japan1 Kazakhstan1 Luxembourg1 Latvia1 Russian Federation1 Sweden1 Slovenia1 South Africa1 More...

Data Management10 Bioinformatics7 Databases7 Systems Biology6 Software Engineering5 Biochemistry4 Molecular Biology4 Genomics3 Proteomics3 Kinetic modelling3 standards3 Distributed Systems3 Transcriptomics2 semantics2 Curation2 Ontology2 Metabolic Networks2 Computational Biology2 Microbiology1 Genetics1 Cell biology1 Perl1 Python1 Microarray analysis1 R1 Streptococcus pyogenes1 Information Retrieval1 Mathematical and statistical modeling1 Programming1 Computational Systems Biology1 Data analysis1 Mass spectrometry (LC-MS/MS)1 Metabolic Engineering1 Synthetic Biology1 protein-protein interactions1 Software Architecture1 Stoichiometric modelling1 metagenomics1 REST1 Computational modelling1 Metabolic Models1 Liver1 VREs1 Cloud computing1 Scientific Computing1 Phytopathology1 RNA-Seq1 Cancer1 Stem cell1 optimization1 Human-Computer Interaction1 Data curation1 PBPK modeling1 Plant biology1 secondary metabolites1 Agile development1 Docker1 gene clusters1 immune signaling1 transcriptional regulation1 Data Integration1 Parameter estimation1 Data Modelling1 Table Curation1 Physiological-based pharmacokinetics model1 More...

Data Management7 Databases5 Java5 Python5 Workflows5 Web services4 Ruby on Rails4 Computational Systems Biology4 SEEK4 Transcriptomics3 Matlab3 Ontologies3 Systems Biology3 semantic web3 Javascript3 Bioinformatics2 Copasi2 R2 Taverna2 Ruby2 MySQL2 HTML2 COBRA toolbox2 SABIO-RK2 Data Integration2 Molecular Biology1 Cell and tissue culture1 SBML1 ODE1 Perl1 Microarray analysis1 Chip-chip1 Cytoscape1 Spring1 PHP1 SQL1 linux1 J2EE1 BioMart1 network theory1 Grails web development framework1 Machine Learning1 SABIO-RK database1 RightField1 SED-ML1 standards1 Protege1 web development1 AWS1 Research Objects1 High Performance Computing1 Statistics1 roadrunner1 tellurium1 Boolean modeling1 Docker1 jupyter notebooks1 Kinetic Modeling1 More...