Assays

What is an Assay?

Filters

Query

Created At

Updated At

Project

More...

Submitter

Creator

Assay class

Assay type

Technology type

ISA-JSON compliance

352 Assays visible to you, out of a total of 352

Tissue Collection - Metadata

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Novel In Vivo CometChip Reveals NDMA-Induced DN...

Organisms: No organisms

SOPs: P.ENG-230912-V1_MMS-and-NDMA-TIS.docx, P.ENG-230913-V1_In-Vivo-Comet-Chip---MUS.docx

Data files: MUS-samples-publish2023-09-13_11-48.xlsx, TIS-samples-publish2023-09-13_12-27.xlsx

Snapshots: No snapshots

Created: 13th Sep 2023 at 16:14, Last updated: 14th Apr 2025 at 18:06

Chemical Challenge - Metadata

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Novel In Vivo CometChip Reveals NDMA-Induced DN...

Organisms: No organisms

SOPs: P.ENG-230913-V1_Chemicals-and-Reagents.docx, P.ENG-230913-V1_In-Vivo-Comet-Chip---MUS.docx

Data files: CHM-samples-publish2023-09-13_11-34.xlsx, MUS-samples-publish2023-09-13_11-48.xlsx

Snapshots: No snapshots

Created: 13th Sep 2023 at 16:13, Last updated: 14th Apr 2025 at 18:05

Mass Cytometry - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: IFN-γ- GranzymeB + Natural killer cells are ind...

Organisms: No organisms

SOPs: P.SED-241121-V1_Mass-Cytometry-Protocol.docx

Data files: samples-publish_250327_AB.xlsx, samples-publish_250327_ABP.xlsx, samples-publish_250327_D.CYTOF.xlsx, samples-publish_250327_TIS.xlsx

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:51, Last updated: 28th Mar 2025 at 21:51

Mass Cytometry Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: IFN-γ- GranzymeB + Natural killer cells are ind...

Organisms: No organisms

SOPs: P.SED-241121-V1_Mass-Cytometry-Protocol.docx

Data files: samples-publish_250327_A.CYTOF.xlsx, samples-publish_250327_D.CYTOF.xlsx

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:52, Last updated: 28th Mar 2025 at 21:51

All Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: No SOPs

Data files: Systematic Granuloma - All Metadata_v1.xlsx

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:10, Last updated: 28th Mar 2025 at 17:26

Electrochemical Sensor Testing - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Reversible Electrochemical Sensor for NDMA: Lev...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish250325_D.SNSR.xlsx, samples-publish250325_SNSR.xlsx

Snapshots: No snapshots

Created: 4th Mar 2025 at 20:49, Last updated: 25th Mar 2025 at 17:48

All Metadata

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Reversible Electrochemical Sensor for NDMA: Lev...

Organisms: No organisms

SOPs: No SOPs

Data files: MIP_AllMetadata.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 17:44, Last updated: 25th Mar 2025 at 17:48

Atomic Force Microscopy - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Reversible Electrochemical Sensor for NDMA: Lev...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish250325_D.IMG.xlsx

Snapshots: No snapshots

Created: 4th Mar 2025 at 20:48, Last updated: 25th Mar 2025 at 17:44

Chemical Simulations - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Reversible Electrochemical Sensor for NDMA: Lev...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish250325_CHM.xlsx, samples-publish250325_D.SIM.xlsx

Snapshots: No snapshots

Created: 4th Mar 2025 at 20:47, Last updated: 25th Mar 2025 at 17:30

Sensor Creation - Metadata

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Reversible Electrochemical Sensor for NDMA: Lev...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish250325_CHM.xlsx, samples-publish250325_SNSR.xlsx

Snapshots: No snapshots

Created: 4th Mar 2025 at 20:44, Last updated: 25th Mar 2025 at 17:28

Chemical Synthesis - Metadata

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Reversible Electrochemical Sensor for NDMA: Lev...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish250325_CHM.xlsx

Snapshots: No snapshots

Created: 4th Mar 2025 at 20:44, Last updated: 25th Mar 2025 at 17:25

All Metadata

Cancer Systems Biology Consortium (CSBC)

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: CSBC

Study: Validation and quantification of peptide antige...

Organisms: No organisms

SOPs: No SOPs

Data files: SureQuant - AllMetadata.xlsx

Snapshots: No snapshots

Created: 21st Mar 2025 at 15:08, Last updated: 21st Mar 2025 at 15:10

SureQuant Analysis - Data Linked

Cancer Systems Biology Consortium (CSBC)

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: CSBC

Study: Validation and quantification of peptide antige...

Organisms: No organisms

SOPs: P.WHI-250319-V1_SureQuant_Protocol.pdf

Data files: samples-publish250319_A.MSP.xlsx, samples-publish250319_D.MSP.xlsx

Snapshots: No snapshots

Created: 19th Mar 2025 at 17:55, Last updated: 19th Mar 2025 at 19:54

ImmunoPeptideomics - Data Linked

Cancer Systems Biology Consortium (CSBC)

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: CSBC

Study: Validation and quantification of peptide antige...

Organisms: No organisms

SOPs: P.WHI-250319-V1_SureQuant_Protocol.pdf

Data files: samples-publish250319_CEL.xlsx, samples-publish250319_CHM.xlsx, samples-publish250319_D.MSP.xlsx

Snapshots: No snapshots

Created: 19th Mar 2025 at 17:54, Last updated: 19th Mar 2025 at 19:49

Sample Processing - Metadata

Cancer Systems Biology Consortium (CSBC)

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: CSBC

Study: Validation and quantification of peptide antige...

Organisms: No organisms

SOPs: P.WHI-250319-V1_SureQuant_SampleProcessing.docx

Data files: samples-publish250319_CEL.xlsx, samples-publish250319_TIS.xlsx

Snapshots: No snapshots

Created: 19th Mar 2025 at 17:53, Last updated: 19th Mar 2025 at 19:25

All Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: No SOPs

Data files: All Metadata - Training Data.xlsx, All Metadata - Validation Data.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:37, Last updated: 5th Feb 2025 at 22:49

PCR: Validation Data - Data Attached

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241121-V1_qPCR-Protocol.docx

Data files: 111224_PCR.xlsx, samples-publish_KPRF_D.PCR.xlsx, samples-publish_KPRF_SAS_RNA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:33, Last updated: 5th Feb 2025 at 22:46

Bacterial Survivability Restriction Assay: Validation Data - Data Attached

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241120-V1_BSRA-Protocol.docx

Data files: 111224_BRSA.xlsx, samples-publish_KPRF_SAS_BAC.xlsx, samples-publish_KPRF_SAS_CEL.xlsx, samples-publish_KPRF_SAS_D.BSRA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:34, Last updated: 5th Feb 2025 at 22:44

Gene Expression Analysis: Validation Data - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241121-V1_RNAseq-Analysis-Protocol.docx

Data files: samples-publish_KPRF_SAS_A.GEX.xlsx, samples-publish_KPRF_SAS_D.SEQ.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:36, Last updated: 5th Feb 2025 at 22:25

Short Read Sequencing: Validation Data - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241120-V1_RNAseq-Protocol.docx

Data files: samples-publish_KPRF_SAS_D.SEQ.xlsx, samples-publish_KPRF_SAS_DNA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:36, Last updated: 5th Feb 2025 at 21:48

Library Prep: Validation Data - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241120-V1_RNAseq-Protocol.docx

Data files: samples-publish_KPRF_SAS_DNA.xlsx, samples-publish_KPRF_SAS_RNA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:35, Last updated: 5th Feb 2025 at 20:46

RNA Extraction: Validation Data - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241120-V1_RNAseq-Protocol.docx

Data files: samples-publish_KPRF_SAS_CEL.xlsx, samples-publish_KPRF_SAS_RNA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:33, Last updated: 5th Feb 2025 at 20:00

Cell Extraction: Validation Data - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241120-V1_Bacterial-culture-protocol.docx, P.SAS-241120-V1_Cell-culture-protocol.docx

Data files: samples-publish_KPRF_SAS_BAC.xlsx, samples-publish_KPRF_SAS_CEL.xlsx, samples-publish_KPRF_SAS_MUS.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:30, Last updated: 5th Feb 2025 at 19:47

Gene Expression Analysis: Training Data - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish_KPRF_A.GEX.xlsx, samples-publish_KPRF_D.SEQ.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:30, Last updated: 5th Feb 2025 at 19:29

Short Read Sequencing: Training Data - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish_KPRF_D.SEQ.xlsx, samples-publish_KPRF_DNA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:29, Last updated: 5th Feb 2025 at 19:26

Library Prep: Training Data - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish_KPRF_DNA.xlsx, samples-publish_KPRF_RNA.xlsx, samples-publish_KPRF_TIS.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:28, Last updated: 5th Feb 2025 at 19:23

Tissue Collection: Training Data - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish_KPRF_BAC.xlsx, samples-publish_KPRF_MUS.xlsx, samples-publish_KPRF_PAT.xlsx, samples-publish_KPRF_PAV.xlsx, samples-publish_KPRF_TIS.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 17:09, Last updated: 5th Feb 2025 at 19:06

Digitally Barcoded Mtb Matrix Analysis - Data Attached

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Intravenous BCG-mediated protection against tub...

Organisms: No organisms

SOPs: No SOPs

Data files: A.DBMM-ASIVBCG.xlsx, samples-publishAS-BCG_A.DBMM, samples-publishAS-BCG_D.SEQ

Snapshots: No snapshots

Created: 23rd Jan 2025 at 20:37, Last updated: 3rd Feb 2025 at 22:38

PET-CT Scan - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Intravenous BCG-mediated protection against tub...

Organisms: No organisms

SOPs: P.FLY-220823-V1_P---PET_CT_Imaging.docx

Data files: samples-publishAS-BCG_D.IMG.xlsx, samples-publishAS-BCG_PAV.xlsx

Snapshots: No snapshots

Created: 23rd Jan 2025 at 20:20, Last updated: 3rd Feb 2025 at 22:14

Microvascular Network Formation - Metadata

MetNet

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MetNet

Study: Polyploidy of MDA-MB-231 cells drives increased...

Organisms: No organisms

SOPs: P.KAM-240712_V1_GFP_OOC-MVN_Protocol.docx

Data files: samples-publishGFP_CEL.xlsx, samples-publishGFP_CEL.xlsx, samples-publishGFP_OOC.xlsx

Snapshots: No snapshots

Created: 12th Jul 2024 at 17:31, Last updated: 28th Jan 2025 at 19:30

Assays

Filters ×

Filters